mRNA_C-tenellus_contig880.3.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig880.3.1
Unique NamemRNA_C-tenellus_contig880.3.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
[Close]
BLAST of mRNA_C-tenellus_contig880.3.1 vs. uniprot
Match: D8LI54_ECTSI (USP domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI54_ECTSI)

HSP 1 Score: 432 bits (1112), Expect = 4.300e-132
Identity = 247/406 (60.84%), Postives = 275/406 (67.73%), Query Frame = 1 
Query:  232 RFVGLSNQGATCYMNSLLQTLYMTPEFRSALYAWKH-----------------------------------EVDGEDASDCIPLQLQRLFGQLQTSDCSSVETRALTTSFGWTAQDSFQQHDVQELCRVLFDALEKTLQGTVNEKLVTDLYQGTLRDYVLCKECHSESSRVDTFLDISLVLKPFGSNKTMNSVTESLEYFLKPEVLDGDNQYLCQTCNRKVDAVKGLKLERLPYLLSLQLKRFDFDYTTFQRIKLNDEVRFPMVLDMNSYVD---------GDQGEEAGVG-------RSKFQRLLSLEKRKLQGLPGTVDEVKREEGDVSEE-EEVERVSTFVQGVPACSERAERAVE-------EAEAIGGGGGGDVLPPALIDC-GDNTDPETEDTDKEVGLM 1269
            RFVGLSNQGATCYMNSLLQTLYMTPEFRSALY WKH                                   E + ED S+CIPLQLQ+LFGQLQ SD + VETRALT SFGWTAQDSFQQHDVQELCRVLFDALE T QGTVNEKLV +LYQG+LRDYV CKECHSESSR+D FLDISLVL+PFGS+KTM SV ESLEYFLKPEVLDGDNQY CQ C++KVDAVKGLK ERLPYLLSLQLKRFDFDY TFQRIKLN+E+RFP++LDMN YVD            G EAG         RS FQR +SLEK+KLQGL G V     ++GD S E  +     T  +G    +E +   +        E E  GGGGG   +P A+    G   DP+ + TDKE G M
Sbjct:   84 RFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHGPQSSSGGTADEGSASAPTRPVVGGDKGQVKQEEEEEEVEDPSECIPLQLQKLFGQLQLSDETCVETRALTDSFGWTAQDSFQQHDVQELCRVLFDALESTFQGTVNEKLVNNLYQGSLRDYVTCKECHSESSRLDNFLDISLVLRPFGSDKTMKSVPESLEYFLKPEVLDGDNQYCCQACDKKVDAVKGLKFERLPYLLSLQLKRFDFDYDTFQRIKLNEEMRFPLILDMNKYVDQPGQPADGAASGGNEAGGASGGIVRERSDFQRSVSLEKKKLQGLLGKV-----KDGDASGEGNDASDGGTTPKGNDEGAEGSSLEMAGLVDGSVEGEDEGGGGGVTGVPVAVTGTVGTGGDPDADGTDKEDGSM 484
[Close]
BLAST of mRNA_C-tenellus_contig880.3.1 vs. uniprot
Match: K3WU38_GLOUD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU38_GLOUD)

HSP 1 Score: 323 bits (827), Expect = 4.160e-99
Identity = 166/305 (54.43%), Postives = 205/305 (67.21%), Query Frame = 1 
Query:  235 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYAWK-----------HEVDG----EDASDC-----------------IPLQLQRLFGQLQTSDCSSVETRALTTSFGWTAQDSFQQHDVQELCRVLFDALEKTLQGTVNEKLVTDLYQGTLRDYVLCKECHSESSRVDTFLDISLVLKPFGSNKTMNSVTESLEYFLKPEVLDGDNQYLCQTCNRKVDAVKGLKLERLPYLLSLQLKRFDFDYTTFQRIKLNDEVRFPMVLDMNSYVDGDQGEEAGVGRSKFQRLLSLEKRKLQGLPGTVDEVKR 1053
            + GLSNQGATCYMNSLLQT+YMTPEFR  LY W+            E D      DA+D                  IP QLQ+LF +LQ S   S+ T+ALT SFGWT  D FQQHDVQELCRVLFDA+EK+ +GTVNE LV DLYQG+L+DYV C  C  ESSR+D FLD+SLV++PFGS + M SV E++E FL+PE+L+ +NQ++C  C  K DA+KGLK  +LPYLLSLQLKRFDFDY T  RIKL+++V FP  LDMNSYV  + G     GR K  R +S+E+ +L+      D ++R
Sbjct:   41 YTGLSNQGATCYMNSLLQTMYMTPEFRKGLYQWQFGQKTKKTKQSEESDSAAPDNDATDGXXXXXXEVGDDEPEEYNIPFQLQKLFAKLQMSSHESISTKALTKSFGWTGADVFQQHDVQELCRVLFDAIEKSFKGTVNETLVNDLYQGSLKDYVQCHTCGHESSRIDNFLDLSLVIRPFGSEEMMKSVEEAIELFLRPELLNNENQWMCDQCKTKRDAIKGLKFSKLPYLLSLQLKRFDFDYATMNRIKLHNQVSFPKFLDMNSYVSDESGAR---GRGKIARKMSMERHELEAKAHKSDRMRR 342
[Close]
BLAST of mRNA_C-tenellus_contig880.3.1 vs. uniprot
Match: G4YL70_PHYSP (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YL70_PHYSP)

HSP 1 Score: 316 bits (810), Expect = 1.600e-98
Identity = 159/271 (58.67%), Postives = 196/271 (72.32%), Query Frame = 1 
Query:  235 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYAWKHEVDGEDASDC---------IPLQLQRLFGQLQTSDCSSVETRALTTSFGWTAQDSFQQHDVQELCRVLFDALEKTLQGTVNEKLVTDLYQGTLRDYVLCKECHSESSRVDTFLDISLVLKPFGSNKTMNSVTESLEYFLKPEVLDGDNQYLCQTCNRKVDAVKGLKLERLPYLLSLQLKRFDFDYTTFQRIKLNDEVRFPMVLDMNSYVDGDQGEEAGVGRSKFQRLLSLEKRKLQ 1020
            F GLSNQGATCYMNSLLQ+++MTPEFR  LY W      + A D          IPLQLQ LF +LQ +   S+ T+ALT SFGWT  D FQQHDVQELCRVL DALE++ +GTVNE LV DLYQG+L+DYV C EC  ESSR+D FLD+SLV++PFGS + M +V E++E FL+PEVL+ +NQ++C  C  K DA+KGLK  +LPY+L LQLKRFDFDY T  RIKL+++V FP  LDMNSYV  + G   GV R K  R +S+E+  L+
Sbjct:  102 FTGLSNQGATCYMNSLLQSMFMTPEFRQGLYNWTCHRAAKKADDXXXXXADEDNIPLQLQNLFAKLQLTTQDSISTKALTKSFGWTGADVFQQHDVQELCRVLLDALERSFKGTVNETLVNDLYQGSLKDYVQCCECGYESSRIDNFLDLSLVIRPFGSTEMMKTVEEAIELFLRPEVLNKENQWMCDRCKVKRDAIKGLKFSKLPYILMLQLKRFDFDYATMSRIKLHNKVTFPKYLDMNSYVSDENG---GV-RGKIARKMSMERHVLE 368
[Close]
BLAST of mRNA_C-tenellus_contig880.3.1 vs. uniprot
Match: A0A8K1FJG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJG8_PYTOL)

HSP 1 Score: 332 bits (850), Expect = 1.090e-97
Identity = 164/267 (61.42%), Postives = 198/267 (74.16%), Query Frame = 1 
Query:  235 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYAWKHEVDGEDA--SDCIPLQLQRLFGQLQTSDCSSVETRALTTSFGWTAQDSFQQHDVQELCRVLFDALEKTLQGTVNEKLVTDLYQGTLRDYVLCKECHSESSRVDTFLDISLVLKPFGSNKTMNSVTESLEYFLKPEVLDGDNQYLCQTCNRKVDAVKGLKLERLPYLLSLQLKRFDFDYTTFQRIKLNDEVRFPMVLDMNSYVDGDQGEEAGVGRSKFQRLLSLEKRKLQGLP 1029
            + GLSNQGATCYMNSLLQT++MTPE R  LY W  + D +D    D IP QLQ+LF +LQ +   S+ T+ALT SFGWT  D FQQHDVQELCRVLFDALEK+ +GTVNE LV DLYQGT++DYV C  C  ESSR+D FLD+SLV++PFGS K M SV E++E+FLKPE+L+GDNQ++C  C  K DA+KGLK  +LPYLLSLQLKRFD+DY T  RIKL+D V FP  LDMNSYV  + G      R    R +S+E+ +L G P
Sbjct:  184 YTGLSNQGATCYMNSLLQTMFMTPELRLGLYRWMFQGDDDDEPEEDNIPFQLQKLFAKLQMNTMDSLSTKALTKSFGWTGADVFQQHDVQELCRVLFDALEKSFKGTVNETLVNDLYQGTMKDYVQCCTCGYESSRIDEFLDLSLVIRPFGSTKMMKSVDEAIEFFLKPELLNGDNQWMCDRCQTKRDAIKGLKFSKLPYLLSLQLKRFDYDYMTDSRIKLHDRVAFPKYLDMNSYVHDEDG-----ARGSIARKMSMERHEL-GAP 444
[Close]
BLAST of mRNA_C-tenellus_contig880.3.1 vs. uniprot
Match: A0A024U1I6_9STRA (USP domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1I6_9STRA)

HSP 1 Score: 326 bits (835), Expect = 3.100e-96
Identity = 167/269 (62.08%), Postives = 205/269 (76.21%), Query Frame = 1 
Query:  223 DPQRFVGLSNQGATCYMNSLLQTLYMTPEFRSALYAWKHEVDGEDASDC---IPLQLQRLFGQLQTS-DCSSVETRALTTSFGWTAQDSFQQHDVQELCRVLFDALEKTLQGTVNEKLVTDLYQGTLRDYVLCKECHSESSRVDTFLDISLVLKPFGSNKTMNSVTESLEYFLKPEVLDGDNQYLCQTCNRKVDAVKGLKLERLPYLLSLQLKRFDFDYTTFQRIKLNDEVRFPMVLDMNSYVDGDQGEEAGVGRSKFQRLLSLEKRKL 1017
            +PQ F GLSNQGATCYMNSLLQ+LYMTPEFR  LY      D +DA+D    IP QLQ+LF  LQ + +  +++T+ALT SFGW + D FQQHDVQELCRVLFDALE++L+GT  E LV DLYQG L+DYV C  C +ESSR+D FLD+SLV++PFGS + M SV E++EYFLKPEVL G+NQ+ C  C +K DA+KGLK  +LPYLL+LQLKRFDFDYTTF RIKLN+EVRFP  L+MN+YV   +G   GV      R +SLE+++L
Sbjct:   68 EPQLFRGLSNQGATCYMNSLLQSLYMTPEFRHQLYQSVTTRDHDDATDLETNIPFQLQKLFAHLQLNKERKAIDTKALTKSFGWNSSDVFQQHDVQELCRVLFDALEESLKGTPTEHLVNDLYQGQLKDYVQCASCGNESSRLDNFLDLSLVIRPFGSTQMMQSVEEAIEYFLKPEVLSGENQWDCSKCAKKQDAIKGLKFSKLPYLLALQLKRFDFDYTTFNRIKLNNEVRFPKYLNMNTYVHDTKG---GV----IARKMSLERQEL 329
[Close]
BLAST of mRNA_C-tenellus_contig880.3.1 vs. uniprot
Match: A0A0P1AC97_PLAHL (Ubiquitin carboxyl-terminal hydrolase 47-like isoform x1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AC97_PLAHL)

HSP 1 Score: 325 bits (834), Expect = 1.080e-95
Identity = 164/283 (57.95%), Postives = 202/283 (71.38%), Query Frame = 1 
Query:  235 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYAWK-----HEV-------DGEDASDC--------IPLQLQRLFGQLQTSDCSSVETRALTTSFGWTAQDSFQQHDVQELCRVLFDALEKTLQGTVNEKLVTDLYQGTLRDYVLCKECHSESSRVDTFLDISLVLKPFGSNKTMNSVTESLEYFLKPEVLDGDNQYLCQTCNRKVDAVKGLKLERLPYLLSLQLKRFDFDYTTFQRIKLNDEVRFPMVLDMNSYVDGDQGEEAGVGRSKFQRLLSLEKRKLQG 1023
            F GLSNQGATCYMNSLLQ+++MTPEFR  LY W      HE+       D E+ SD         IPLQLQ+LF +LQ +   S+ T+ALT SFGWT  D FQQHDVQELCRVL DALEK+ +GTVNE LV DLYQG+L+DYV C EC  ESSR+D FLD+SLV++PFGS + M +V E++E FL+PEVL  +NQ++C  C  K +A+KGLK  +LPY+L LQLKRFDFDY T  RIKL++EV FP  LDMNSYV G+ G      R K  R +S+E+ +L+G
Sbjct:  100 FTGLSNQGATCYMNSLLQSMFMTPEFRQGLYNWTCHRVIHEINQDIAQKDDEEESDVEIEADEDNIPLQLQKLFAKLQLTTQDSISTKALTKSFGWTGADVFQQHDVQELCRVLLDALEKSFRGTVNESLVNDLYQGSLKDYVQCYECRYESSRIDNFLDLSLVIRPFGSTEMMKTVEEAIELFLRPEVLKDENQWMCDRCKVKRNAIKGLKFSKLPYILMLQLKRFDFDYATMNRIKLHNEVTFPKYLDMNSYVSGENGS----ARGKVARKMSMERHELEG 378
[Close]
BLAST of mRNA_C-tenellus_contig880.3.1 vs. uniprot
Match: A0A3R7A7E5_9STRA (USP domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7A7E5_9STRA)

HSP 1 Score: 327 bits (839), Expect = 1.400e-95
Identity = 168/269 (62.45%), Postives = 205/269 (76.21%), Query Frame = 1 
Query:  223 DPQRFVGLSNQGATCYMNSLLQTLYMTPEFRSALYAWKHEVDGEDASDC---IPLQLQRLFGQLQTS-DCSSVETRALTTSFGWTAQDSFQQHDVQELCRVLFDALEKTLQGTVNEKLVTDLYQGTLRDYVLCKECHSESSRVDTFLDISLVLKPFGSNKTMNSVTESLEYFLKPEVLDGDNQYLCQTCNRKVDAVKGLKLERLPYLLSLQLKRFDFDYTTFQRIKLNDEVRFPMVLDMNSYVDGDQGEEAGVGRSKFQRLLSLEKRKL 1017
            +PQ F GLSNQGATCYMNSLLQ+LYMTPEFR  LY      D +DA+D    IP QLQ+LF  LQ + +  +++T+ALT SFGW + D FQQHDVQELCRVLFDALE++L+GT  E LV DLYQG L+DYV C  C +ESSR+D FLD+SLV++PFGS K M SV E++EYFLKPEVL G+NQ+ C  C +K DA+KGLK  +LPYLL+LQLKRFDFDYTTF RIKLN+EVRFP  L+MN+YV   +G   GV      R +SLE+++L
Sbjct:  397 EPQLFRGLSNQGATCYMNSLLQSLYMTPEFRHQLYQSVTTRDHDDATDLETNIPFQLQKLFAHLQLNKERKAIDTKALTKSFGWNSSDVFQQHDVQELCRVLFDALEESLKGTPTEHLVNDLYQGQLKDYVQCASCGNESSRLDNFLDLSLVIRPFGSTKMMQSVEEAIEYFLKPEVLSGENQWDCSKCAKKQDAIKGLKFSKLPYLLALQLKRFDFDYTTFNRIKLNNEVRFPKYLNMNTYVHDTKG---GV----IARKMSLERQEL 658
[Close]
BLAST of mRNA_C-tenellus_contig880.3.1 vs. uniprot
Match: A0A7S1G4T9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4T9_9STRA)

HSP 1 Score: 303 bits (776), Expect = 4.320e-95
Identity = 147/238 (61.76%), Postives = 181/238 (76.05%), Query Frame = 1 
Query:  238 VGLSNQGATCYMNSLLQTLYMTPEFRSALYAWKHEVDGEDAS-DCIPLQLQRLFGQLQTSDCSSVETRALTTSFGWTAQDSFQQHDVQELCRVLFDALEKTLQGTVNEKLVTDLYQGTLRDYVLCKECHSESSRVDTFLDISLVLKPFGSNKTMNSVTESLEYFLKPEVLDGDNQYLCQTCNRKVDAVKGLKLERLPYLLSLQLKRFDFDYTTFQRIKLNDEVRFPMVLDMNSYVDGD 948
             GL+NQGATCYMNSLLQ L+MTPE R  LYAWK E D +  S DCIP QLQRLFG LQ +   S+ T+ LT SFGWT  +SFQQHDVQELCRVLF+A+E   +GT +  LV ++Y+G LRDYV C+EC  E++R D F+D+SLV+KPFG+ + + SV E+L  ++ PEVL G NQY C  C++KVDA KGLK  +LPYLL+LQLKRFDFDY+T QR+KLND V FP+ L+MN YV  D
Sbjct:  126 AGLANQGATCYMNSLLQALFMTPELRRGLYAWKFEEDNDGPSEDCIPYQLQRLFGLLQLTSKRSLSTKPLTKSFGWTGAESFQQHDVQELCRVLFNAIEVGFKGTEHAGLVDNMYKGKLRDYVTCRECKRENAREDDFMDLSLVIKPFGATECVKSVQEALREWILPEVLSGPNQYHCSQCDKKVDANKGLKFGKLPYLLALQLKRFDFDYSTGQRVKLNDRVSFPLWLNMNDYVGDD 363
[Close]
BLAST of mRNA_C-tenellus_contig880.3.1 vs. uniprot
Match: A0A5D6Y180_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y180_9STRA)

HSP 1 Score: 323 bits (827), Expect = 1.900e-94
Identity = 163/276 (59.06%), Postives = 195/276 (70.65%), Query Frame = 1 
Query:  235 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYAWK--HEVDGEDA------------SDCIPLQLQRLFGQLQTSDCSSVETRALTTSFGWTAQDSFQQHDVQELCRVLFDALEKTLQGTVNEKLVTDLYQGTLRDYVLCKECHSESSRVDTFLDISLVLKPFGSNKTMNSVTESLEYFLKPEVLDGDNQYLCQTCNRKVDAVKGLKLERLPYLLSLQLKRFDFDYTTFQRIKLNDEVRFPMVLDMNSYVDGDQGEEAGVGRSKFQRLLSLEKRKLQ 1020
            F GLSNQGATCYMNSLLQT++MTPEFR  LY W+     D  DA             D IP QLQ+LF +LQ     S+ T+ALT SFGWT  D FQQHDVQELCRVLFDA+E++ +GTVNE LV DLYQG L+DYV C  C  ESSR+D FLD+SLV++PFGS + M SV E++E FL+PE+L+ DNQ+ C  C  K DA+KGLK  +LPYLLSLQLKRFDFDY T  RIKL++ V FP  LDMNSYV GD     G  R +  R +SLE+ +L+
Sbjct:  123 FTGLSNQGATCYMNSLLQTMFMTPEFRQGLYQWQFGRRDDAGDAXXXXXXXXXXSGDDNIPFQLQKLFAKLQMRTSESISTKALTKSFGWTGADVFQQHDVQELCRVLFDAIERSFKGTVNETLVNDLYQGALKDYVQCHACGFESSRIDHFLDLSLVIRPFGSEEMMKSVEEAIELFLRPELLNQDNQWNCDRCKTKRDAIKGLKFAKLPYLLSLQLKRFDFDYATMNRIKLHNRVSFPKYLDMNSYVSGDAAR--GGSRGRIARKMSLERHELE 396
[Close]
BLAST of mRNA_C-tenellus_contig880.3.1 vs. uniprot
Match: A0A484E3U2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3U2_BRELC)

HSP 1 Score: 322 bits (824), Expect = 2.420e-94
Identity = 177/344 (51.45%), Postives = 220/344 (63.95%), Query Frame = 1 
Query:   76 IALLFVPLPRVVKMKEPQ------QCTAMVLYSS-------DQGDEEGSSAKNYQDAEANGPDPQRFVGLSNQGATCYMNSLLQTLYMTPEFRSALYAWKHEV--------------DGEDAS-DCIPLQLQRLFGQLQTSDCSSVETRALTTSFGWTAQDSFQQHDVQELCRVLFDALEKTLQGTVNEKLVTDLYQGTLRDYVLCKECHSESSRVDTFLDISLVLKPFGSNKTMNSVTESLEYFLKPEVLDGDNQYLCQTCNRKVDAVKGLKLERLPYLLSLQLKRFDFDYTTFQRIKLNDEVRFPMVLDMNSYVDGDQGEEAGVGRSKFQRLLSLEKRKLQG 1023
            +A +   LPR    + P       Q TA+  YSS       D      +   NY  + A     + F GLSNQGATCYMNSLLQ+++MTPEFR  LY W  +               D E+A  D IPLQLQ LF +LQ +   S+ T+ LT SFGWT  D FQQHDVQELCRVLFDALE T + TVNE LV DL+QG L+DYV C EC  ESSR+DTFLD+SLV++PFGS + M SV E++E FL+PEVL  +NQ++C  C  K +A+KGLK  +LPY+L LQLKRFDFDY T  RIKL++EV F   LDMNSYV  ++G   GV R K  R +S+E+ +L+G
Sbjct:   36 VASVMTQLPRAQDEEAPAATSPSVQSTALTTYSSSGFDGLYDSTGYTSNGESNYSSSGAYDRPLKAFTGLSNQGATCYMNSLLQSMFMTPEFRQGLYKWTSDRANTLMAQDDEQGVNDDEEADEDNIPLQLQNLFAKLQLTMQDSISTKGLTKSFGWTGSDVFQQHDVQELCRVLFDALENTFKNTVNENLVNDLFQGCLKDYVQCYECRYESSRIDTFLDLSLVIRPFGSTEMMKSVEEAIELFLRPEVLKEENQWMCDRCKVKRNAIKGLKFSKLPYILMLQLKRFDFDYATMTRIKLHNEVTFSKYLDMNSYVSDEKG---GV-RGKIARKMSMERHELEG 375
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig880.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI54_ECTSI4.300e-13260.84USP domain-containing protein (Fragment) n=2 Tax=E... [more]
K3WU38_GLOUD4.160e-9954.43Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Glob... [more]
G4YL70_PHYSP1.600e-9858.67Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
A0A8K1FJG8_PYTOL1.090e-9761.42Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024U1I6_9STRA3.100e-9662.08USP domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A0P1AC97_PLAHL1.080e-9557.95Ubiquitin carboxyl-terminal hydrolase 47-like isof... [more]
A0A3R7A7E5_9STRA1.400e-9562.45USP domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A7S1G4T9_9STRA4.320e-9561.76Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A5D6Y180_9STRA1.900e-9459.06Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A484E3U2_BRELC2.420e-9451.45Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig880contigC-tenellus_contig880:3633..10619 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LI54
Preferred nameUSP47
PFAMsUCH,Ubiquitin_2
Model size1589
Max annot lvl2759|Eukaryota
KEGG koko:K11857
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000578,GO:0001558,GO:0001654,GO:0001745,GO:0003002,GO:0003674,GO:0003824,GO:0004843,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006355,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0007346,GO:0007350,GO:0007351,GO:0007389,GO:0007423,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008595,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009653,GO:0009790,GO:0009798,GO:0009880,GO:0009887,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009895,GO:0009948,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010389,GO:0010466,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010948,GO:0010951,GO:0010972,GO:0016579,GO:0016787,GO:0019005,GO:0019219,GO:0019222,GO:0019538,GO:0019783,GO:0019904,GO:0023051,GO:0023056,GO:0023057,GO:0030111,GO:0030154,GO:0030162,GO:0030177,GO:0030307,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0031461,GO:0031647,GO:0031935,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032434,GO:0032435,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0033554,GO:0034641,GO:0034644,GO:0035282,GO:0035520,GO:0036211,GO:0036459,GO:0040008,GO:0042176,GO:0042177,GO:0042221,GO:0042493,GO:0042675,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043281,GO:0043412,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045786,GO:0045861,GO:0045892,GO:0045927,GO:0045930,GO:0045934,GO:0046483,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0051716,GO:0051726,GO:0052547,GO:0052548,GO:0060255,GO:0060548,GO:0060828,GO:0060968,GO:0061136,GO:0065007,GO:0065008,GO:0065009,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071987,GO:0080090,GO:0080134,GO:0080135,GO:0090263,GO:0090304,GO:0090596,GO:0101005,GO:0104004,GO:0140096,GO:1901360,GO:1901564,GO:1901799,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902229,GO:1902230,GO:1902275,GO:1902494,GO:1902531,GO:1902532,GO:1902679,GO:1902749,GO:1902750,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903506,GO:1903507,GO:1990234,GO:2000058,GO:2000059,GO:2000112,GO:2000113,GO:2000116,GO:2000117,GO:2001020,GO:2001021,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
Exons8
Evalue4.45e-135
EggNOG OGsCOG5077@1|root,KOG4598@2759|Eukaryota
EC3.4.19.12
Descriptionthiol-dependent ubiquitin-specific protease activity
Cds size1161
COG categoryO
BRITEko00000,ko01000,ko01002,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig880.3.1prot_C-tenellus_contig880.3.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig880 3947..10505 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790129.406733-UTR-C-tenellus_contig880:3632..39461680790129.406733-UTR-C-tenellus_contig880:3632..3946Choristocarpus tenellus KU2346UTRC-tenellus_contig880 3633..3946 -
1680790129.5208714-UTR-C-tenellus_contig880:10505..106191680790129.5208714-UTR-C-tenellus_contig880:10505..10619Choristocarpus tenellus KU2346UTRC-tenellus_contig880 10506..10619 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790129.4206195-CDS-C-tenellus_contig880:3946..42341680790129.4206195-CDS-C-tenellus_contig880:3946..4234Choristocarpus tenellus KU2346CDSC-tenellus_contig880 3947..4234 -
1680790129.4352493-CDS-C-tenellus_contig880:5363..54501680790129.4352493-CDS-C-tenellus_contig880:5363..5450Choristocarpus tenellus KU2346CDSC-tenellus_contig880 5364..5450 -
1680790129.4452693-CDS-C-tenellus_contig880:5612..57261680790129.4452693-CDS-C-tenellus_contig880:5612..5726Choristocarpus tenellus KU2346CDSC-tenellus_contig880 5613..5726 -
1680790129.454787-CDS-C-tenellus_contig880:6376..64721680790129.454787-CDS-C-tenellus_contig880:6376..6472Choristocarpus tenellus KU2346CDSC-tenellus_contig880 6377..6472 -
1680790129.4719229-CDS-C-tenellus_contig880:7326..74331680790129.4719229-CDS-C-tenellus_contig880:7326..7433Choristocarpus tenellus KU2346CDSC-tenellus_contig880 7327..7433 -
1680790129.4835653-CDS-C-tenellus_contig880:9189..93011680790129.4835653-CDS-C-tenellus_contig880:9189..9301Choristocarpus tenellus KU2346CDSC-tenellus_contig880 9190..9301 -
1680790129.4938974-CDS-C-tenellus_contig880:9918..100801680790129.4938974-CDS-C-tenellus_contig880:9918..10080Choristocarpus tenellus KU2346CDSC-tenellus_contig880 9919..10080 -
1680790129.5090113-CDS-C-tenellus_contig880:10310..105051680790129.5090113-CDS-C-tenellus_contig880:10310..10505Choristocarpus tenellus KU2346CDSC-tenellus_contig880 10311..10505 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig880.3.1

>prot_C-tenellus_contig880.3.1 ID=prot_C-tenellus_contig880.3.1|Name=mRNA_C-tenellus_contig880.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=387bp
MKEPQQCTAMVLYSSDQGDEEGSSAKNYQDAEANGPDPQRFVGLSNQGAT
CYMNSLLQTLYMTPEFRSALYAWKHEVDGEDASDCIPLQLQRLFGQLQTS
DCSSVETRALTTSFGWTAQDSFQQHDVQELCRVLFDALEKTLQGTVNEKL
VTDLYQGTLRDYVLCKECHSESSRVDTFLDISLVLKPFGSNKTMNSVTES
LEYFLKPEVLDGDNQYLCQTCNRKVDAVKGLKLERLPYLLSLQLKRFDFD
YTTFQRIKLNDEVRFPMVLDMNSYVDGDQGEEAGVGRSKFQRLLSLEKRK
LQGLPGTVDEVKREEGDVSEEEEVERVSTFVQGVPACSERAERAVEEAEA
IGGGGGGDVLPPALIDCGDNTDPETEDTDKEVGLMV*
back to top

mRNA from alignment at C-tenellus_contig880:3633..10619-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig880.3.1 ID=mRNA_C-tenellus_contig880.3.1|Name=mRNA_C-tenellus_contig880.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=6987bp|location=Sequence derived from alignment at C-tenellus_contig880:3633..10619- (Choristocarpus tenellus KU2346)
TAGGTTTTCTCTCCATCAACTGTTGGCTACCCACAGTCGGACTGATAACT
CGGAGTAACGTCTTAGACATATGTTATCGCGCTGCTCTTCGTTCCTCTCC
CACGTGTTGTTAAGATGAAAGAACCTCAGCAATGCACGGCGATGGTGCTA
TACTCTAGTGATCAAGGCGACGAGGAAGGCAGCTCAGCCAAGAACTACCA
AGATGCTGAAGCAAACGGACCTGATCCTCAACGATTCGTAGGGTTATCAA
ATCAAGGAGCAACCTGCTACATGAACAGCCTTCTTCAGACGCTCTACATG
ACCCCGGAGGTAAAGGAAAGTTTCTGGATCATGGCCTCACCACAGGGTCC
CTATAGGAATGTGTTGCCAAAGGTATCCCCAAATCCACGTTTCAGAGTTC
TGTCGATCGTCTGCATCGCGCTATGAATATAAATGTGAGTACCAAGGCAT
TTTACACCCCCACCCCCCACCTACCGTATCCGTTGCATCCTACCTAAATC
GTCAACGCAACTTGCTGTCTCTACCAATCCAATCCGCAGTTTCGCTCAGC
GCTATACGCTTGGAAGCACGAGGTAGATGGTGAGGATGCTAGTGATTGTA
TCCCCCTCCAGCTCCAACGCCTCTTCGGACAGCTGCAAACAAGCGACTGC
TCCTCTGTGGAGACCCGCGCCCTGACCACGAGCTTCGGGTGGACAGCACA
GGTAGTTCATTAATAGTATGTAGTTTGGTTGCTCCAGTGGGCCCCTCTTG
TGCCATCCGTGACTTCCCCATCATACATCTATCTTCTTAGTGCGAGTGTA
CGGAGGGGTGAGTCGTGGTATTCCTTACAAGGCTGTATTCACTTCAACTT
TCGTCCTCTGACAACTCCGAAACCCTCAGGCGATACATGGATACGTCTTT
TGCCCTGTTTACTCATCATATCCATCCTTGACCTGCATTGCATTGTATTG
TTCCCACCTTATTGTCGGGGATGTGAAATAGCAAATGGTTATTATTGTTC
TTAAAGAGATGGTATGGCACCAACCTTCAAGCACAACGTTTTTGGTCTCA
CACGTTCGCAATCATCAGTAGAGCCGTGTTGGCGCGCACTCCAGACTCTT
TTTAAGAAAAGTGAGTAGCTTACTTGTGAGCAACATAAACACTGTTGAGC
CCCTGCACCTGGATGACTCGCCCACCCCCACACCTTACCACGTCTGTGAG
CACACTATTGTTGAGTAGTGAGTGTCGCATTATACTGCATCATAGGTGTA
CCAACTCCCTCCCCCCCAAGAAAACGTTTTCTGCTCTCGCCCTGTATTGC
TCATTTTCTCTTCATCAGGACTCATTTCAGCAACATGATGTGCAGGAACT
GTGTCGTGTTCTGTTTGATGCCCTTGAGAAGACCTTGCAGGGAACAGTAA
ATGAGAAGCTTGTAACAGACCTGTATCAAGGTTTGTATTAGGTGCAGGTA
GATTGTTGTATGCACTATACCTGGCTCTATTCCATTCTATTCTTTTTTCT
CACTGTGTGTGTCACATTGCTATGGTACTTAGAGACAAGGACCATAGTGC
TGTGTGGAATAGGATGATGTAGTTCTTAACTGATGTAATTGTGTGTGAGG
CTTGGGGTGAGGACAGTGCATGTTGCTGAGATTGGCAACTGTCACTGTGA
GTGGCTGCAACATTTGCCACACTGGCTGTTGATCAGGACCACTTACCAAA
GGGCTGTCAATCTCCTGACAGATTGTGTGTGTCGAATACAGCATAGCCAC
CCACAGGATTTATGTCACTCCTAAGCACTCACTCTTAAGCACTCATTCCT
AAGCACCATCATCATAATTTTTTACTCATTCATCTTTTGCAAATAGTGCC
GGGGTTAGGGTTAGGGTTGGGGCTAGGGACCATTCCATTGCATTAATTTG
TGTTTTTGTGGGTGTTGGTACAAGCATATAACAACAGGCAACAGTTACAC
ACGTGGTTCCGCATATTCGGTGGATAGTGATGATACATCATATGATGCAG
GTATGATGAGTGAGGTAGTGATAGTGGTGCCATCTAACTCATTGCAGTCA
TGAGTAGTTAGGAGCACTCCATGATTATGTGAAGAGCAGCCAACAACTAC
ATACTAATACAGTGTGAGTTGTATCTCTTCCCATTGTCGAAGCTCAGCAA
CATGCCCCATTCTTTGCGATCTTTCAACACGCTTAGGCAACCTTACATCT
AGCTAGAGGGGGGTGATATCAGACTGGAGCTTTGGGATATTCAACCTTAA
CAATCAATCAGGATGACCACAGAGGTTTATACAACCAATTAGCACAGCTA
ACCATAGACAATTATGTTGACTATTTTTCCACTGTCAAGTCCTACGTGAG
GACCAAGGGAGATATGGAAATTGTGCTGGGGGTACAGGGACAGACTCTGC
TCGTGGGATGTGACAAGATTGTCAAGCTGGAGGGTGTGTTAATAGAGGAT
GTTGCTGAGGCCAAGAGGGCATTCGGTGTTTTCATGAGGAGTACAAATAT
GTTGTACAAAACTGTACAAAACGATTGTGAGAACGTTGAATGCCCTCTTG
ATTTTTGTGACATCCTTCGCCAACATGCCTTCCGACTTAACAAAGTTGTG
ACAACCCACAAGCAGAGGTTTACCATCTACCTCCAGCACTATATCCAGAT
CTCCATCAGCCCCCAAGGAGACTTGGCAGTGCCAAACCAGTAAATATATT
TGCCTATATTGCATATTCTCTAGGGGCGCCTGTGAGTCTTATCTTAATTA
ATCAAAATTACAATATTTGATATTGCATGTGTACCCTAATTCTCTCTGCC
TAATTCCAAACCCTACCCCTACCTAGCAGAGAGAAACAAATACAAGATCA
TGATGGTGGTATTTGTGGTGTTGGTCTCAAATAATAAACCAAAATTGTGA
TAGATGATACTGTGTACTCCGTCATGGTCTTGTATTCTTGCTCTGTCCTC
TAGCTGGGTAGGGTTAGGGTAAGGGTTTGGGATCAGGAAAAAATGTACGT
AGAAACTACTTCCTTGAAACTGACCCCTCCTCTCTCACCAAATTCTGAGA
AAAATTATGGCATACTGGCCTATGTTTGACGTAAGAATGTACACTTTGCA
TAAGCCTCCCCTGCTTACACACAGTAAACTCCCCTCTGATGTACTATTTT
CTTGTTCGGTCGATTCTTCTACTTTCTCTTTTACAGGTACACTCCGAGAC
TATGTTCTTTGTAAGGAGTGTCACTCGGAGAGCAGCCGTGTAGACACCTT
TCTAGACATATCCTTGGTTTTGAAACCCTTTGGGAGTAATAAGGTAAGCT
CACTGCCCCCGCCTCCCACCACCACCCTTGCTTTTTTTCTCATTCCAGCC
CTTTGTCTCTCCCTTTAATACTTACTGGAATTCCTTTTATGAATTAAATG
TTCATAAAACAATACTCTAGTCCCTGCTGTACTCGAGAACACTTCCAATT
ATGTTCACTCCATTGGAATTTTGACCAGTGTTGGTACACATCATATGTGC
AACTTGCACTCTGCACAACAACCTATTTAGGAATTTATCGTCTGCACGCT
GAAAAAGTCACAATATGCCATAACATGGACTTAAGTGTTTGCCGCATTTC
AAAGGTCAAACCTGCCCTACTTTTGGTGAAAAATCCATTTATCACTGGCT
CACTGATCCATCTTGTGGAAGAATATCCTCAAACTAAATGTGCAGTGTAG
ATACGCACAGTTTATAGCAACTTTATTACGAACTGTGTGTATATCTTCTC
CACAATGGTCTGAAATTTACTTCAAAGTAGGTAGGAGGGACCCATTGGAG
TTATACACCAGATGCTTGGTCAACAGTGGATAATGATTGAAGTTTTCATT
GTCAACACTGTTGACGGAGCTCATAAGTAACTTAAATGTTTACACTCCCA
TCTTGAGAATGCCTCCTCTAGAGGCGCTTAAAACATGCTGAGTGGAGTAG
CAAGTTTTTTTTCGCTACTTTTCAAGTGTGGTTTCAAATGGTTTCTATTT
GCCTTTTTGGTCAGTGGCTGACTATGAGGCATCAAGCAACTTAGCCAGCC
CCCCAAGTACAGGATTCCTAAACTGTTCTTCCTCTCTTGGATGCTCCTGT
CATGAGCACACACATTTCTTCATTGTCCCCATCCTACCCCCTTACAGACG
ATGAACTCTGTGACAGAATCACTGGAGTACTTTCTCAAACCTGAGGTGCT
GGATGGGGATAATCAATACCTGTGCCAGACGTGTAACCGAAAGGTGCCTT
GAGTATTGCCACCTCTGCGTGAAATGGGGGATGCATGAGTGGAGGCTCTT
GTGATATACATATCATGCACTATTAATAGTGTCTGCTTTTCAACTGTGCT
GGGCGCACTAATTTATTCAAGCACAATCATGCCACCATGGCATCCATATT
AGCAACATTTGTTATTTGCTGTGAGTAATTGTGCATTGTGTCATGTGTGC
AATGCTCAGGGGGGTGGCCGAAATGTTTTAACTTCACCTTTCCCTGTCCT
GCACTTCAATGCTTTATTCTTTGCTGCTGTAGCTTGGGGTGCAGTCCTCT
CACAAGTGGGATAGCCGTTCTTCAGAGTTGAGATGTAATGTAGATCTTTG
TTTAAGCAGGTGGAATAGGGTTTGCACTGACAAGAGTTGCATGTGAACAT
AAGAAGAGGGTGAGGGATCGAGTGCATGTGTGCACGTACCTATTCCACTA
CAAAGGTACAGCATGTGGCATTTGGCGATTGTGCACCCTCTGTTCCTGCC
CCCATGCTTCATGGTTGTTTTGAAGTCAGAAAGCAGTGAATAGATGGTTC
AAGCTTGTATCCCTACACAGTTGTGCTTGTCCATGAATGTTCTACCTCTA
GGCTGAAATCCACCCTGAAATATCCATGGCTGCTTGCAAGTAGGTGGATG
CGGTGAAGGGTCTCAAGCTGGAACGCCTTCCTTATCTGTTGTCCCTCCAG
CTCAAGCGATTTGACTTTGACTACACCACCTTCCAGAGGATCAAGCTAAA
TGATGAGGTGAAGCTAACCCTTGACAGCACAATCTACCAAGAAGAAACTG
TTGCTGGTCTTTGGTCTCCTCAAACCATGTGTGAGCATGTGTGTGTAAGA
AGAACACCGCCTCTTCCCCCCCTCCCTCCTTTTCACACTTTGCCTGGCCC
CCATCCTCCTCATTGATAGGTTCGATTTCCAATGGTATTGGATATGAATA
GCTATGTTGATGGTGACCAAGGGGAGGAGGCCGGTGTGGGACGGAGCAAA
TTTCAGGTGAACTGTCAGTTGGGAGGGGGAGTGCTGATTGTGAGACTGAT
GGATAGGGATGTGGGAGTGGAGGAATGCTTAGTTGGAGGGTGGTAAAACT
CTAGCTAGAGTTCTTTAGCAAGTTGTACCATGGGGGAGAGTGAGGATCTG
AAGACCTGAGAAGTGAATACCAGTACTGTTAAATTAGGAGCAACTGAAGG
GATAGGTAAAAACATTACATACATTGGGTCCCAACCTTTGTGACAGGGAA
ACATGGAGTAGGATTTGAAGGAGGTTTGCCACTTTTGTCATAGGTATGTA
TTGCCTACTGTTCTGCATTACTCAATGCGAGACATTTGAAAGGTCTTGTT
GCTTGTTTCTGACTTGCTTGTAGCGTTCCATCTTAGGGGATCATGGCCTT
TTGCTGTGTTGTGTACACAGTGAACTTTTTTGCTTTGGCAGTTGTGCCTC
AAATATTTGCATGTACATGCACCTATCGATACAATAATCAACTTAGTATG
TTCCCTCCTCAACACTATGTTGGTATGGTAATCACAGCGCCTAGTCCAGG
TCTCAGCTGAGTCAAAGTCTGAGTTGACAATTATCAGTTCCAGAGTGGTG
CGACTATGTTTTATGGCATGCATTTATGCAAAAAAAGAGGGAGATGCACA
GATGAAGAGGTTTAAAACCGTTCACAGAGACCCCGATGTGAAAGACACTA
GCTGTGAAACAATGTAGCAAACAAGGTTTGTAGATTGGTAGCAGAAAATG
TATCCCACCCATTTTCTTCAAGGCAATAACTGATATTCTATTTATGAGAC
TCTGTGTCTGCATGCTGAATCTTGAAGCTGCAACATGGTAGAACTGCAAT
GTGGTACTACAGGCATAATTTCTGGTTTGAAGGTTTGAGTTCTCTTCAAG
CCACTGGTCCTTGTCCATGAACCCTGAGTTGGATCTGCATTACTACTACT
GTGTCAATGGGTTTGCACTATGAAGAACTTTAGGAAATGCCTGGTGTGTA
CTAACAGGGTCATTTGTGGTAGTGGGGAATCTCATCCTGCTATCTTTGAC
TTTGATTGATTTTTCCCAACCTCCCCTCCCCTCCCCTCTTCGCACTTCCC
ATTCATATTTTATTGGTACAATGCTTCTGTATCAGCGATTGCTATCTCTT
GAAAAGAGGAAGTTGCAAGGTTTACCAGGGACAGTTGATGAAGTGAAGAG
GGAGGAGGGTGATGTCAGTGAGGAGGAAGAGGTAGAGAGGGTTTCAACAT
TTGTGCAAGGTGTGCCTGCTTGCTCAGAAAGAGCTGAAAGAGCAGTGGAA
GAAGCAGAAGCTATTGGGGGTGGTGGGGGAGGGGATGTGTTGCCCCCTGC
CCTCATTGACTGCGGGGATAACACAGACCCAGAGACAGAGGACACTGACA
AAGAGGTTGGTTTGATGGTGTGACTTACTGGGAGAGGGTTGTGTGTGACG
GTGCGTGTTTGTGATTTAGGTTGCATTTTTTTTTGCAGTTAGTAAACTTG
CCTTTGCTTGGGAGTGACAACACAACACTCTTGTCATGAATTGGTGGCTA
AGCTGTTGTTGTGAAGTTCATGTATCCATTTTGCAAGTACTGAGTGGTCG
TTAAAGCTTCCTTCCCCCCCCCTTTCATGCCTATCCAAATATACTGTTTG
CCCTCCTATTTTGCTTTCCCCTTCCTCCACTTCTTCTTGCCTCGAGGGTG
GGGATTGATACACTCAGCTGGCACAAATAAATGGAAC
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig880:3633..10619-

>mRNA_C-tenellus_contig880.3.1 ID=mRNA_C-tenellus_contig880.3.1|Name=mRNA_C-tenellus_contig880.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1161bp|location=Sequence derived from alignment at C-tenellus_contig880:3633..10619- (Choristocarpus tenellus KU2346)
ATGAAAGAACCTCAGCAATGCACGGCGATGGTGCTATACTCTAGTGATCA
AGGCGACGAGGAAGGCAGCTCAGCCAAGAACTACCAAGATGCTGAAGCAA
ACGGACCTGATCCTCAACGATTCGTAGGGTTATCAAATCAAGGAGCAACC
TGCTACATGAACAGCCTTCTTCAGACGCTCTACATGACCCCGGAGTTTCG
CTCAGCGCTATACGCTTGGAAGCACGAGGTAGATGGTGAGGATGCTAGTG
ATTGTATCCCCCTCCAGCTCCAACGCCTCTTCGGACAGCTGCAAACAAGC
GACTGCTCCTCTGTGGAGACCCGCGCCCTGACCACGAGCTTCGGGTGGAC
AGCACAGGACTCATTTCAGCAACATGATGTGCAGGAACTGTGTCGTGTTC
TGTTTGATGCCCTTGAGAAGACCTTGCAGGGAACAGTAAATGAGAAGCTT
GTAACAGACCTGTATCAAGGTACACTCCGAGACTATGTTCTTTGTAAGGA
GTGTCACTCGGAGAGCAGCCGTGTAGACACCTTTCTAGACATATCCTTGG
TTTTGAAACCCTTTGGGAGTAATAAGACGATGAACTCTGTGACAGAATCA
CTGGAGTACTTTCTCAAACCTGAGGTGCTGGATGGGGATAATCAATACCT
GTGCCAGACGTGTAACCGAAAGGTGGATGCGGTGAAGGGTCTCAAGCTGG
AACGCCTTCCTTATCTGTTGTCCCTCCAGCTCAAGCGATTTGACTTTGAC
TACACCACCTTCCAGAGGATCAAGCTAAATGATGAGGTTCGATTTCCAAT
GGTATTGGATATGAATAGCTATGTTGATGGTGACCAAGGGGAGGAGGCCG
GTGTGGGACGGAGCAAATTTCAGCGATTGCTATCTCTTGAAAAGAGGAAG
TTGCAAGGTTTACCAGGGACAGTTGATGAAGTGAAGAGGGAGGAGGGTGA
TGTCAGTGAGGAGGAAGAGGTAGAGAGGGTTTCAACATTTGTGCAAGGTG
TGCCTGCTTGCTCAGAAAGAGCTGAAAGAGCAGTGGAAGAAGCAGAAGCT
ATTGGGGGTGGTGGGGGAGGGGATGTGTTGCCCCCTGCCCTCATTGACTG
CGGGGATAACACAGACCCAGAGACAGAGGACACTGACAAAGAGGTTGGTT
TGATGGTGTGA
back to top