mRNA_C-tenellus_contig8798.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8798.1.2 vs. uniprot
Match: D7FK62_ECTSI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK62_ECTSI) HSP 1 Score: 332 bits (850), Expect = 5.550e-110 Identity = 169/259 (65.25%), Postives = 202/259 (77.99%), Query Frame = 1 Query: 133 ASGPPEGPALYSSHAPTTPLQRLTVAGYAALSALRDSKRADMVAALGEVTGRMALERLHRTMLLDPEGLQVLRARPVINEATLDLPGLAALPKGSLGRSYSDFMGKYGFSPDSRSQVRFVDDPDLAYVMQRYREVHDLWHVLSGLPPTVEAELALKWFELVQTGLPVCALSAVFGPLALPRHEPRENSGVMKHWGKDSKDESKSRHGSREVLNGTYLPWALRTGRRARS-LICVWYERRWEMTVDEVRRELRVDPAPER 906 ASGP LYS H PT+PLQR +AG+A ++AL D +RADMVA LGEVTGR+ALE+L+R+ML DPEG ++LRARPVINEAT+DL LAALP G+LG+SYS+FM + FSPD RS V++VDDPDLAYVM+RYREVHDLWH L+GLP TVE ELALKWFELVQTGLPVCALSAV GPLALP EP + S + R GSREVL T++PWA+R GRRAR L+CVWYE+RWE ++ VRR+L V+ AP+R Sbjct: 81 ASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPAPTTTPSXX--XSSGSGRKRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQR 337
BLAST of mRNA_C-tenellus_contig8798.1.2 vs. uniprot
Match: A0A835Z0M6_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M6_9STRA) HSP 1 Score: 248 bits (634), Expect = 1.040e-78 Identity = 127/258 (49.22%), Postives = 167/258 (64.73%), Query Frame = 1 Query: 130 SASGPPEGPALYSSHAPTTPLQRLTVAGYAALSALRDSKRADMVAALGEVTGRMALERLHRTMLLDPEGLQVLRARPVINEATLDLPGLAALPKGSLGRSYSDFMGKYGFSPDSRSQVRFVDDPDLAYVMQRYREVHDLWHVLSGLPPTVEAELALKWFELVQTGLPVCALSAVFGPLALPRHEPRENSGVMKHWGKDSKDESKSRHGSREVLNGTYLPWALRTGRRARSLICVWYERRWEMTVDEVRRELRVDPAPE 903 SA+G P LY H P +P QR+ + +A SA D +RADMVAALGE TG AL+++H ML DP+G+++LR RP ++E ++DL L LP G+ G++Y+DFM F+PDSR VRFVDD DLAYVM RYR+VHDLWHVLSGLPP++E E+ALKWFE+VQTGLPV A+SA+ G +PR R L +PWA+R GRR+ L+ VWYER W+M + R +L+ +PAP+ Sbjct: 13 SAAGEPCKRILYKGHNPISPSQRVGLTFISAFSAFADPERADMVAALGETTGHRALKQMHHRMLQDPDGIELLRERPQLDEHSVDLEALGQLPSGTFGKAYADFMAHNQFTPDSRLPVRFVDDADLAYVMARYRQVHDLWHVLSGLPPSLEGEIALKWFEMVQTGLPVAAISALVGAARVPRE-------------------------GRAALRQKLVPWAIRAGRRSVPLMNVWYERYWDMYLSNFREKLKFEPAPQ 245
BLAST of mRNA_C-tenellus_contig8798.1.2 vs. uniprot
Match: W7U2W9_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2W9_9STRA) HSP 1 Score: 238 bits (607), Expect = 9.780e-74 Identity = 125/252 (49.60%), Postives = 163/252 (64.68%), Query Frame = 1 Query: 145 PEGPALYSSHAPTTPLQRLTVAGYAALSALRDSKRADMVAALGEVTGRMALERLHRTMLLDPEGLQVLRARPVINEATLDLPGLAALPKGSLGRSYSDFMGKYGFSPDSRSQVRFVDDPDLAYVMQRYREVHDLWHVLSGLPPTVEAELALKWFELVQTGLPVCALSAVFGPLALPRHEPRENSGVMKHWGKDSKDESKSRHGSREVLNGTYLPWALRTGRRARSLICVWYERRWEMTVDEVRRELRVDPAP 900 PE P LYSSH PT+ Q+L +AG++A +A RD +R DMVAALGE TG AL+RL R M DP G ++L A+P I E + L LP+G+ GR Y+ F+ +G+SPD R+ VRFVDD +LA+VMQRYR+VHD WHVL GLPPTV ELALKWFE+VQT LP+ A S V GPL+L E R++L Y+PWA+R +AR L+CVWYER +E ++ +R+ L++ AP Sbjct: 80 PETP-LYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQE-------------------------RKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAP 305
BLAST of mRNA_C-tenellus_contig8798.1.2 vs. uniprot
Match: A0A067BMW8_SAPPC (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BMW8_SAPPC) HSP 1 Score: 232 bits (592), Expect = 3.520e-72 Identity = 122/259 (47.10%), Postives = 162/259 (62.55%), Query Frame = 1 Query: 130 SASGPPEGPALYSSHAPTTPLQRLTVAGYAALSALRDSKRADMVAALGEVTGRMALERLHRTMLLDPEGLQVLRARPVINEATLDLPGLAALPKGSLGRSYSDFMGKYGFSPDSRSQVRFVDDPDLAYVMQRYREVHDLWHVLSGLPPTVEAELALKWFELVQTGLPVCALSAVFGPLALPRHEPRENSGVMKHWGKDSKDESKSRHGSREVLNGTYLPWALRTGRRARSLICVWYERRWEMTVDEVRRELRVDPAPER 906 SA+GPP L++ H PTTP Q+L VA AA+S + +R DM+AALG+ TG +AL ++H M DP G+++L +P I + D+ L +LP S G +Y+ FM +GF D R+ VRFVDD +LAYV+QRYRE+HD WHVL GLPPTV +E+ALK+ ELVQTGLPVCALS GPL L E +E L GT++PWA R GR A L+ V+YER +E ++++RR L + AP R Sbjct: 21 SAAGPPTRHVLHAHHVPTTPTQKLLVAATAAVSVFANPERGDMLAALGDATGEVALRQMHLKMCSDPVGMEILAQKPRIRSSVTDIDALRSLPTDSFGYAYTQFMDAHGFEADGRAHVRFVDDAELAYVLQRYRELHDFWHVLFGLPPTVFSEIALKYVELVQTGLPVCALSGFVGPLRLSCDERKE-------------------------LLGTFVPWAYRAGREAPCLLNVYYEREYETKLEDLRRRLNIRVAPAR 254
BLAST of mRNA_C-tenellus_contig8798.1.2 vs. uniprot
Match: A0A1V9YRS5_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YRS5_9STRA) HSP 1 Score: 231 bits (589), Expect = 9.660e-72 Identity = 122/257 (47.47%), Postives = 163/257 (63.42%), Query Frame = 1 Query: 130 SASGPPEGPALYSSHAPTTPLQRLTVAGYAALSALRDSKRADMVAALGEVTGRMALERLHRTMLLDPEGLQVLRARPVINEATLDLPGLAALPKGSLGRSYSDFMGKYGFSPDSRSQVRFVDDPDLAYVMQRYREVHDLWHVLSGLPPTVEAELALKWFELVQTGLPVCALSAVFGPLALPRHEPRENSGVMKHWGKDSKDESKSRHGSREVLNGTYLPWALRTGRRARSLICVWYERRWEMTVDEVRRELRVDPAP 900 SA+GPP L++ H PTTPLQ++ VA AA+S + + +R DM+AALG+ TG +AL ++H M DP G+++L +P I D+ L +LPK S G +Y+ FM +GF D R+ VRFVDDP+LAYV+QRYRE+HD WHVL GLPPTV ELALK+ ELVQTGLPV ALS + GPL L E +E L TYLPWA + G++A L+ V+YER +E ++++R LR+ AP Sbjct: 22 SAAGPPTQHLLHAHHVPTTPLQKILVAATAAVSVMANPERGDMLAALGDATGEVALRQMHLKMCSDPTGMEILAQKPRIRSTVTDVDALRSLPKDSFGYAYTQFMDAHGFEADGRAHVRFVDDPELAYVLQRYRELHDFWHVLFGLPPTVFGELALKYVELVQTGLPVAALSGIVGPLRLSCDERKE-------------------------LFTTYLPWAHQAGKQAPFLMNVYYEREYESNLEDLRARLRILVAP 253
BLAST of mRNA_C-tenellus_contig8798.1.2 vs. uniprot
Match: A0A6A4ZPM3_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZPM3_9STRA) HSP 1 Score: 226 bits (577), Expect = 7.790e-70 Identity = 120/269 (44.61%), Postives = 164/269 (60.97%), Query Frame = 1 Query: 115 LAQVSSASGPPEGPALYSSHAPTTPLQRLTVAGYAALSALRDSKRADMVAALGEVTGRMALERLHRTMLLDPEGLQVLRARPVINEATLDLPGLAALPKGSLGRSYSDFMGKYGFSPDSRSQVRFVDDPDLAYVMQRYREVHDLWHVLSGLPPTVEAELALKWFELVQTGLPVCALSAVFGPLALPRHEPRENSGVMKHWGKDSKDESKSRHGSREVLNGTYLPWALRTGRRARSLICVWYERRWEMTVDEVRRELRVDPAPERPSCAR 921 L+ SA+G P LY SH PT+PLQ++ VA +A+S + +R DM+AALG+VTG +AL ++H M DP G+Q+L +P +D+ L LP+ + G +Y+ FM +GF D R+ V+FVDDP+LAYVMQRYRE+HD WHVL GLPPT +E+ALK+ ELVQTGLPVC LS GPL L HE R+ L T++PWA R G +A L+ V+YER + +D++R LR+ P P+ A+ Sbjct: 20 LSTALSAAGEPTKHVLYKSHMPTSPLQKIVVAVGSAVSVFTNPERGDMLAALGDVTGAVALRKMHLKMSSDPVGMQILAEKPRFRSNVVDIDALRDLPRNTFGYAYTQFMDAHGFEADGRADVKFVDDPELAYVMQRYRELHDFWHVLFGLPPTEFSEIALKYVELVQTGLPVCTLSGFVGPLRLSSHERRQ-------------------------LLCTFIPWAYRAGHQAPFLMNVFYEREFNTPLDDLRARLRILLPPSPPAIAK 263
BLAST of mRNA_C-tenellus_contig8798.1.2 vs. uniprot
Match: A0A151MFC8_ALLMI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=4 Tax=Crocodylia TaxID=1294634 RepID=A0A151MFC8_ALLMI) HSP 1 Score: 225 bits (574), Expect = 1.170e-69 Identity = 119/252 (47.22%), Postives = 157/252 (62.30%), Query Frame = 1 Query: 145 PEGPALYSSHAPTTPLQRLTVAGYAALSALRDSKRADMVAALGEVTGRMALERLHRTMLLDPEGLQVLRARPVINEATLDLPGLAALPKGSLGRSYSDFMGKYGFSPDSRSQVRFVDDPDLAYVMQRYREVHDLWHVLSGLPPTVEAELALKWFELVQTGLPVCALSAVFGPLALPRHEPRENSGVMKHWGKDSKDESKSRHGSREVLNGTYLPWALRTGRRARSLICVWYERRWEMTVDEVRRELRVDPAP 900 P+GP LY H PT+PLQ++ +A +AL+ALRD R DMVA LGE TG +AL+RL M D EG Q+LR RP I +TLD+ GL LP G+ GR Y F+ SPD+R +FVDD +LAYV+QRYREVHDL H L G+P + E+ +KWFE VQTGLP+CAL AVFGP+ L + +VL +PWA+++G RA ++ ++YERRWE TV+ +R E+ + P P Sbjct: 5 PQGP-LYPGHVPTSPLQKVLLAAGSALAALRDPYRHDMVAVLGETTGSLALQRLRDKMRHDAEGYQILRERPRIRLSTLDVAGLRGLPDGTFGREYMRFLEDNRVSPDTRMPAKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCALGAVFGPIRLKARKL-------------------------QVLTTELIPWAVQSGLRANCILNIYYERRWEQTVESLREEIGILPPP 230
BLAST of mRNA_C-tenellus_contig8798.1.2 vs. uniprot
Match: A0A7S0ARY6_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ARY6_9STRA) HSP 1 Score: 225 bits (573), Expect = 6.780e-69 Identity = 121/267 (45.32%), Postives = 166/267 (62.17%), Query Frame = 1 Query: 103 GSRGLAQVSSASGPPEGPALYSSHAPTTPLQRLTVAGYAALSALRDSKRADMVAALGEVTGRMALERLHRTMLLDPEGLQVLRARPVINEATLDLPGLA-ALPKGSLGRSYSDFMGKYGFSPDSRSQVRFVDDPDLAYVMQRYREVHDLWHVLSGLPPTVEAELALKWFELVQTGLPVCALSAVFGPLALPRHEPRENSGVMKHWGKDSKDESKSRHGSREVLNGTYLPWALRTGRRARSLICVWYERRWEMTVDEVRRELRVDPAP 900 GS G SS+S P PAL++S TPL+R+ VA ++A +AL D RAD VAALGEVTG +AL+ +HR M DP G ++L+ RP+++ A++D+ L+ LP + G Y+ FM +GF PD R+ ++F+ DP+LAY+M RYR+ HD WH L+GLPPTV ELALKW E++QTGLPV ALSA G L L E R +LN YLPWA+R GR + L+ V+YE +E ++E+R LR++ P Sbjct: 47 GSSGSDDSSSSSQPHLSPALFASG--LTPLERVGVAIHSATTALADPTRADAVAALGEVTGHVALQSIHRRMHSDPTGKRILQDRPLVDNASIDIEHLSQTLPLNTFGHQYASFMMGHGFDPDGRAAIKFIADPELAYIMLRYRQCHDFWHTLTGLPPTVLGELALKWLEVIQTGLPVAALSATVGSLRLSAEE-------------------------RRILNEVYLPWAVRVGRNSEYLLNVYYEEEFESDIEELRARLRIEKVP 286
BLAST of mRNA_C-tenellus_contig8798.1.2 vs. uniprot
Match: UPI00148DC878 (ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=3 Tax=Pleuronectoidei TaxID=30942 RepID=UPI00148DC878) HSP 1 Score: 224 bits (571), Expect = 9.370e-69 Identity = 128/271 (47.23%), Postives = 168/271 (61.99%), Query Frame = 1 Query: 115 LAQVSSASGPPEG--PALYSSHAPTTPLQRLTVAGYAALSALRDSKRADMVAALGEVTGRMALERLHRTMLLDPEGLQVLRARPVINEATLDLPGLAALPKGSLGRSYSDFMGKYGFSPDSRSQVRFVDDPDLAYVMQRYREVHDLWHVLSGLPPTVEAELALKWFELVQTGLPVCALSAVFGPLALPRHEPRENSGVMKHWGKDSKDESKSRHGSREVLNGTYLPWALRTGRRARSLICVWYERRWEMTVDEVRRELRVDPAPERPSCAR 921 L SS+SG +G LY+ H PTTP+Q+ +A + ++AL+D R DMVA LGE TG +AL L M DPEG +L RP I +TLDL +A+LP+GS GR Y F+ +PDSR+ VRFVD+ +LAYVMQRYREVHDL H L G+P + E+A+KWFE QTGLP+CAL AV GPL L S SR + L + PWAL+ GRRAR ++ V+YERRWE ++++R+EL +DP P PS ++ Sbjct: 28 LCSSSSSSGFTDGCFDGLYTGHIPTTPIQKALLAVGSGVAALQDPYRHDMVAVLGETTGHLALLNLRDRMRNDPEGHTILTERPRIRLSTLDLTTMASLPEGSFGREYLRFLEDNHVTPDSRADVRFVDNEELAYVMQRYREVHDLLHTLLGMPTNMLGEVAVKWFEAAQTGLPMCALGAVLGPLRL----------------------STSRL---QTLFTSLGPWALQNGRRARCVLSVFYERRWEQNLEDLRQELNIDPPPVIPSASK 273
BLAST of mRNA_C-tenellus_contig8798.1.2 vs. uniprot
Match: W5LXV6_LEPOC (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=5 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5LXV6_LEPOC) HSP 1 Score: 222 bits (566), Expect = 1.130e-68 Identity = 118/249 (47.39%), Postives = 154/249 (61.85%), Query Frame = 1 Query: 154 PALYSSHAPTTPLQRLTVAGYAALSALRDSKRADMVAALGEVTGRMALERLHRTMLLDPEGLQVLRARPVINEATLDLPGLAALPKGSLGRSYSDFMGKYGFSPDSRSQVRFVDDPDLAYVMQRYREVHDLWHVLSGLPPTVEAELALKWFELVQTGLPVCALSAVFGPLALPRHEPRENSGVMKHWGKDSKDESKSRHGSREVLNGTYLPWALRTGRRARSLICVWYERRWEMTVDEVRRELRVDPAP 900 P LY SH PT PLQ+ +A + ++ALRD R DMVA LGE TG++AL RL M DPEG +L+ RP I +TLD L +LP+GSLGR Y F+ + +PDSR++V+FVDD +LAYVM RYREVHDL H L G+P + E+A+KWFE QTGLP+C L A GPL L ++L GT PWALR+GR AR ++ V+YE+RW ++ E+R EL ++P P Sbjct: 5 PHLYQSHIPTNPLQKALLAVGSGIAALRDPYRHDMVAVLGETTGQLALRRLRDEMRRDPEGCSILQERPRIRLSTLDPCALGSLPEGSLGREYLRFLQRNKVTPDSRAEVKFVDDEELAYVMLRYREVHDLMHTLLGMPTNMLGEVAVKWFEAAQTGLPMCILGAALGPLRLSARRL-------------------------QLLAGTLAPWALRSGRGARCVLTVFYEQRWAQSLAELREELGIEPPP 228 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8798.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8798.1.2 >prot_C-tenellus_contig8798.1.2 ID=prot_C-tenellus_contig8798.1.2|Name=mRNA_C-tenellus_contig8798.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=309bp VALSCSTLFVNGRDRASCLLFSSVRSCSKHCHLPGSRGLAQVSSASGPPEback to top mRNA from alignment at C-tenellus_contig8798:221..3194- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8798.1.2 ID=mRNA_C-tenellus_contig8798.1.2|Name=mRNA_C-tenellus_contig8798.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2974bp|location=Sequence derived from alignment at C-tenellus_contig8798:221..3194- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8798:221..3194- >mRNA_C-tenellus_contig8798.1.2 ID=mRNA_C-tenellus_contig8798.1.2|Name=mRNA_C-tenellus_contig8798.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=927bp|location=Sequence derived from alignment at C-tenellus_contig8798:221..3194- (Choristocarpus tenellus KU2346)back to top |