mRNA_C-tenellus_contig8782.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8782.1.1 vs. uniprot
Match: D7G824_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G824_ECTSI) HSP 1 Score: 428 bits (1101), Expect = 7.170e-127 Identity = 343/817 (41.98%), Postives = 444/817 (54.35%), Query Frame = 1 Query: 1 GLLAKYQRNMALSLVRSRR-QPLPVVQSGGGASAXXXXXX------SGVSGDPVPKMPAELPLSRMEMSRLRGGTSQEERGLEDWHPESLLVLWCSSLLESSNKRGPPGRGSELELANGVGGEEA--WERGRGMVLSVLRWVCLGEQGKEPGVTAGTIVPFLAREAAAAVVAEGVKEGMGRDGGAERGIDVLTVLRSNLETHLIAMSAAAGESGTAKGGSNVHQDGGLSGLGVKPPLGTAKISSSLGG---VSSCKGGGSINGMGVPSRLLGLSQQELLALKALLDEALADSNKASTSSSAANVNGSAVTSVGTTDSVDSMASSARVSSFTGKVPGAEVGRGRDRSALGMDSSVRWDSCVRIFLLARGLRERLIAKNKVKAEGGGVESVNGAGLSWSGVEADKVASSAALAMLLSSSDMQRSVLEEVCPLTRVGVGAEAGGRGSGGLTWDEARALLLPVWVKDIGELRRVTEVAAANTFRQDKDLMSAALFFVILGKERTLLALAKADKPFVGSRALSGSERSLHTAGGRAEGASAGQRLERLLAHDFTTPQGRAVSEKNAYILLRKRRYKAAAAVFLLARPAMLKEALQVILVHTKDLQLALLVARLVERRDAEDIAAGEEGWNGEVGAESG------------------GGWERVGEGLE---------------------LLLDGASRKLLREEFLPTYDGE---GATRRRVIASFGGTRSASPPPTPVGDHHKHQRDAFLEAVTLHWLGEPERALRALCRGRAAN--EGSSSLSTSGEVGNGKGRRLKDSLQALGMCNRAIDVASRPLLVSYL 2283 GL+AKYQRN+AL+LVR+R +PLP XXXXXX + SG P P LPL R E++ LRGG +++ R LEDWHPESL LWC+SL +A G G +E WE+GR LSVLRWV +G E GV AGT+VP L +G A +G D L L++ L ++L A + +G +G V+ P + K ++ G S+ + GVP RLL LS EL AL ALLD AL ++ + S + A T ++ S ASS SS T +PG G +A+ + ++ D +FLL RGLR RL + GGG E+ + A + VEA +ASSAALAMLL+ S Q+ VLE +CP + G GA A GL W +A A+LLP+WV+D EL+RV E A+ TF QD+DLM+AA+FF LGKE+ LLALAKAD+ FVG R L G E +++ GR++GA+ GQRLE+LLAHDF++P+GR+ +EKNAY+LLRKR++K+AAAVFLL RPAM+KEALQVIL+H KDLQLALL+ARLVE RD G +G SG GL + GASRKLLR+E LP +DGE G T+ G RS+SP QR+ FLE TL WLG+P+RALRALCRG A+ +G S + +G + + D+L LG+CNRAIDVA RP LVS L Sbjct: 1367 GLMAKYQRNLALALVRTRGVKPLPAXXXXXXXXXXXXXXXXXXMARTSSSGPSRPPFP--LPLLRDEIAGLRGGATRDGRHLEDWHPESLAALWCTSL-----------------VAGGGGAKEGHRWEKGRERTLSVLRWVSKDAEGSESGVVAGTVVPLLEHGGXXXXXXXXXXDG------ASKGDDHLGSLKACLASYLSCRLEAENAATDGRGSPVPGSNGSGFTAAVRRPRHSVKSPAAGDGPIPASARDVADTATAAGVPRRLLSLSGAELSALSALLDVALGQADASGPSPAVAPSAARPAAGDNTAAALFSKASSPPASSST-DIPGVRSGSTMPPTAV-IATTNHMDDYANVFLLTRGLRLRL-----GDSAGGGSENASAA----AAVEAG-IASSAALAMLLAPSGTQKEVLEVLCP--KAGGGAVAAVATGPGLAWSDASAMLLPLWVRDAAELQRVAESVASATFLQDRDLMAAAMFFAALGKEKKLLALAKADRGFVGQRNLGGGEGDINSTSGRSQGATQGQRLEKLLAHDFSSPRGRSAAEKNAYVLLRKRKFKSAAAVFLLPRPAMVKEALQVILMHVKDLQLALLIARLVEIRDGGGAVTSPR-TTGSLGGFSGVXXXXXXXXXXXXXXXXXXXXXXXXXGLNGXXXXXXXXXXXXXXXXXAAYKSIGGASRKLLRDELLPVFDGETGDGPTQ-------GQQRSSSP----------LQRNPFLECATLFWLGQPDRALRALCRGLVASGHQGGSYAAPAGGISS---TVAADNLSGLGLCNRAIDVAMRPFLVSKL 2123
BLAST of mRNA_C-tenellus_contig8782.1.1 vs. uniprot
Match: A0A6H5K928_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K928_9PHAE) HSP 1 Score: 420 bits (1080), Expect = 4.560e-124 Identity = 339/831 (40.79%), Postives = 429/831 (51.62%), Query Frame = 1 Query: 1 GLLAKYQRNMALSLVRSRR-QPLPV------------VQSGGGASAXXXXXXSGVSGDPVPKMPAELPLSRMEMSRLRGGTSQEERGLEDWHPESLLVLWCSSLLESSNKRGPPGRGSELELANGVGGEEAWERGRGMVLSVLRWVCLGEQGKEPGVTAGTIVPFLAREAAAAVVAEGVKEGMGRDGGAERGIDVLTVLRSNLETHLIAM----SAAAGESGTAKGGSNVHQDGGLSGLGVKPPLGTAKISSSLGG---VSSCKGGGSINGMGVPSRLLGLSQQELLALKALLDEALADSNKASTSSSAANVNGSAVTSVGTTDSVDSMASSARVSSFTGKVPGAEVGRGRDRSALGMDSSVRWDSCVRIFLLARGLRERLIAKNKVKAEGGGVESVNGAGLSWSGVEADKVASSAALAMLLSSSDMQRSVLEEVCPLTRVGVGAEAGGRGSGGLTWDEARALLLPVWVKDIGELRRVTEVAAANTFRQDKDLMSA--------ALFFVILGKERTLLALAKADKPFVGSRALSGSERSLHTAGGRAEGASAGQRLERLLAHDFTTPQGRAVSEKNAYILLRKRRYKAAAAVFLLARPAMLKEALQVILVHTKDLQLALLVARLVERRDAEDIAAGEEGWNGEVGAESGGGWERVGEGLELL---------------------------------------LDGASRKLLREEFLPTYDGE---GATRRRVIASFGGTRSASPPPTPVGDHHKHQRDAFLEAVTLHWLGEPERALRALCRGRAANEGSSSLSTSGEVGNGKGRRLKDSLQALGMCNRAIDVASRPLLVSYL 2283 GL+AKYQRN+AL+LVR+R +PLP V GG A SG S P P LPL R EM+ LRGG ++E R LEDWHPESL LWC+SL+ G G E WE+GR LSVLRWV QG E GV AG +VP LA A +G D L L++ L ++L +A G+ GSN + K ++ GG S+ GVP RLL LS EL AL ALLD AL ++ + S + A T ++ S SS SS T +PG G +A+ + ++ D +FLLARGLR RL ++ GGG E AGL EA +ASSAALAMLL+ S Q+ VLE +CP + G G A GL W +A A+LLP+WV+D EL+RV E A+ TF QD+DLM+A A+FF LGKE+ LLALAKAD+ FVG R LSG E +++ GR++GA+ GQRLE+LLAHDF++P+GR+ +EKNAY+LLRKR++K+A AVFLL RPAM+KEALQVIL+H KDLQLALL+ARLVE RD A +G +G SG + GASRKLLR+E LP +DGE G T+ + +SF + QR+ FLE TL WLG+P+RALRALCRG A+ G S + G D+L LG+CNRAID+A RP LVS L Sbjct: 1444 GLMAKYQRNLALTLVRTRGVKPLPAXXXXXXXXXXDTVAQGGPYPAMARTSSSGPSRPPSP-----LPLLRDEMAGLRGGATREGRHLEDWHPESLATLWCTSLVA--------GGGCAKE-------GRRWEKGRERTLSVLRWVSKDAQGSESGVVAGAVVPLLAHGX------XXXXXXXXXXXXASKGDDHLARLKACLVSYLSCRLEEENAVTDGRGSPVAGSNGXXXXXXXXXXXXXLRHSVKSPAAAGGPIPASARDVAXXXXXAGVPRRLLSLSGAELSALFALLDVALGQADASGPSPAVAPSAARPAAGDNTAAALFSKVSSPSPSSST-DIPGVRSGSTMPPTAV-IATTNHMDDYANVFLLARGLRLRL-----GESAGGGSEDAAAAGL-----EAG-IASSAALAMLLAPSGTQKEVLEVLCP--KAGGGVVAAVATGPGLAWSDASAMLLPLWVRDATELQRVAESVASATFLQDRDLMAARTPAGCWAAMFFAALGKEKKLLALAKADRGFVGQRNLSGGEGDINSTSGRSQGATQGQRLEKLLAHDFSSPRGRSAAEKNAYVLLRKRKFKSAVAVFLLPRPAMVKEALQVILMHVKDLQLALLIARLVEIRDGGGGAVASPRASGSLGGFSGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGNAAAAYKSIGGASRKLLRDELLPVFDGETEHGPTQGQQRSSF-----------------RLQRNPFLECATLFWLGQPDRALRALCRGLVAS-GHQDGSYAAPAGGFSSTVAADNLSGLGLCNRAIDIAMRPFLVSKL 2215
BLAST of mRNA_C-tenellus_contig8782.1.1 vs. uniprot
Match: A0A1Z5JBW6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBW6_FISSO) HSP 1 Score: 108 bits (271), Expect = 1.820e-20 Identity = 75/210 (35.71%), Postives = 110/210 (52.38%), Query Frame = 1 Query: 1174 VASSAALAMLLSSSDMQRSVLEEVCPLTRVGVGAEAGGRGSGGLTWDEARALLLPVWVKDIGELRRVTEVAAANTFRQDKDLMSAALFFVILGKERTLLALAKADKPFVGSRALSGSERSLHTAGGRAEGASAGQRLERLLAHDFTTPQGRAVSEKNAYILLRKRRYKAAAAVFLLARPAMLKEALQVILVHTKDLQLALLVARLVERRD 1803 VASSA LA ++SS Q ++LE PL + L WD A+ L +P+W++ L ++ E +FRQ +D+M A+FF+ GK RTL LA D+ VG + + L +HDF + +GR +EKNA+ LLRK +++AAA+ FLL++P LK A++ IL D+ LA LV RL+ D Sbjct: 1399 VASSACLAAMISSD--QENLLERCRPLWQK-------------LNWDNAKKLRIPLWLRSDVALAKLCEEIGQTSFRQGRDVMDCAIFFIACGKLRTLTNLAATDQSEVGKKFF-----------------------KFLTSHDFESTKGRLAAEKNAFSLLRKNKHRAAASFFLLSKPPSLKSAVETILTKLNDIDLAFLVMRLMTNID 1570
BLAST of mRNA_C-tenellus_contig8782.1.1 vs. uniprot
Match: A0A7S2YRZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRZ4_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.180e-20 Identity = 98/330 (29.70%), Postives = 143/330 (43.33%), Query Frame = 1 Query: 1303 LTWDEARALLLPVWVKDIGELRRVTEVAAANTFRQDKDLMSAALFFVILGKERTLLALAKADKPFVGSRALSGSERSLHTAGGRAEGASAGQRLERLLAHDFTTPQGRAVSEKNAYILLRKRRYKAAAAVFLLARPAMLKEALQVILVHTKDLQLALLVARLVERRDAEDIAAGEEGWNGEVGAESGGGWERVGEGLELLLDGASRKLLREEFLPTYDGEGATRRRVIASFGGTRSASPPPTPVGDHHKHQRDAFLEAVTLHWLGEPERA---LRALCRGRAANEGSSSLSTSGEVGNGKGRRLKDSLQALGMCNRAIDVASRPLLVSYL 2283 + W+ AR L LP W++ L RV E FR+ +D+M ALFF+I K RTL LA DK G + + + +DF + +GR +EKNA+ LLRK +Y A+A FLLA P L+ AL+ I+ D+ LA +VARL+E ++ + + G++G +G GG G G + E + PT G T +++I SA D L A+ L W+ + A L R ++E L E + +LK A+ N ID S PLL Y+ Sbjct: 378 MDWNTARQLRLPFWIRSDKSLARVCEEIGQTMFREKRDIMECALFFIIARKMRTLRNLAATDKSMSGKKFFNF-----------------------ITTYDFASERGRRAAEKNAFSLLRKCQYIVASAFFLLAEPPSLQSALETIVTKLNDIDLAFMVARLMESKEIAEPSGMGSGFSGVLG----GGAGYAGFGAPTATSVEPDAVPYERWSPTL---GKTAKKLIVDRMFNLSAG--------------DNALCAIELLWMKKANEASWWLPGFIRSSPSSESGYRLVDDPE--SILSEKLKQRGDAMKRANAIIDWTSVPLLHKYM 661
BLAST of mRNA_C-tenellus_contig8782.1.1 vs. uniprot
Match: A0A1Z5JPQ6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPQ6_FISSO) HSP 1 Score: 107 bits (267), Expect = 5.510e-20 Identity = 90/257 (35.02%), Postives = 128/257 (49.81%), Query Frame = 1 Query: 1033 DSCVRIFLLARGLRERLI--AKNKVKAEGGGVESVNG-AGLSWSGVEAD-KVASSAALAMLLSSSDMQRSVLEEVCPLTRVGVGAEAGGRGSGGLTWDEARALLLPVWVKDIGELRRVTEVAAANTFRQDKDLMSAALFFVILGKERTLLALAKADKPFVGSRALSGSERSLHTAGGRAEGASAGQRLERLLAHDFTTPQGRAVSEKNAYILLRKRRYKAAAAVFLLARPAMLKEALQVILVHTKDLQLALLVARLV 1791 DSC +FL A L ++L A NK + +VN LS D VASSA LA ++S Q +LE PL + L WD AR L +P W++ L +V E +FR+ +D+M A+FF+ GK RTL LA D+ +G + H + L +HDF + +GR +EKNA+ LLRK +++AAA+ FLL++P LK A++ IL D+ LA LV RL+ Sbjct: 1351 DSCGELFLFAAFLMQQLEEDADNKREVYNDSENAVNDITRLSRKENSTDFHVASSACLAAMISVD--QEILLERCRPLGQK-------------LNWDNARKLRIPFWLRSDKALAKVCEEIGQTSFREGRDVMECAIFFIACGKLRTLTNLAATDQSEMGKK--------FH---------------KFLTSHDFESTKGRLAAEKNAFSLLRKNKHRAAASFFLLSKPPSLKSAVETILTKLNDIDLAFLVMRLM 1569
BLAST of mRNA_C-tenellus_contig8782.1.1 vs. uniprot
Match: A0A448ZNC5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNC5_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.680e-19 Identity = 64/162 (39.51%), Postives = 93/162 (57.41%), Query Frame = 1 Query: 1303 LTWDEARALLLPVWVKDIGELRRVTEVAAANTFRQDKDLMSAALFFVILGKERTLLALAKADKPFVGSRALSGSERSLHTAGGRAEGASAGQRLERLLAHDFTTPQGRAVSEKNAYILLRKRRYKAAAAVFLLARPAMLKEALQVILVHTKDLQLALLVARL 1788 L+W E R L +P W + +LRR++E +RQ KD++ +A+FF+I GK+RTL LA AD G + H + L ++DF++ +GR +EKNA+ LLRK +Y +A+A FLLA P +LK A++ I +DL LA LVARL Sbjct: 1670 LSWSEVRNLRVPFWFRCDEKLRRLSEEIGQQMYRQSKDILKSAIFFIIAGKKRTLTNLAAADPTLSGKK--------FH---------------KFLTSYDFSSRRGRVAAEKNAFSLLRKNQYDSASAFFLLAEPPILKSAVETIAAKMEDLDLAFLVARL 1808
BLAST of mRNA_C-tenellus_contig8782.1.1 vs. uniprot
Match: A0A7S3V901_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V901_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.010e-19 Identity = 84/280 (30.00%), Postives = 128/280 (45.71%), Query Frame = 1 Query: 1306 TWDEARALLLPVWVKDIGELRRVTEVAAANTFRQDKDLMSAALFFVILGKERTLLALAKADKPFVGSRALSGSERSLHTAGGRAEGASAGQRLERLLAHDFTTPQGRAVSEKNAYILLRKRRYKAAAAVFLLARPAMLKEALQVILVHTKDLQLALLVARLVERRDAE------DIAAGEEGWNGEVGAESGGGWERVGEGLELLLDGASRKLLREEFLPTYDGEGATRRRVIASFGGTRSASPPPTPVGDHHKHQRDAFLEAVTLHWLGEPERALRALC 2127 TWD AR+L +P W++ L+ ++E A +++ D++ ALF+VI G R L +A AD+ G L + + ++F++ +GR +EKNA+ LLRKR+Y AAAA FLLA P M+K AL +I+ +DL LAL VARL++ + D+ G G GGG+ +G+ +++ D K ++ P + A P H D L+ V L WL P A A+C Sbjct: 539 TWDIARSLRIPFWLRSDDALKSISEEIAQTKYKESMDVVECALFYVITGNMRMLKTVAAADRKTSGRTFL-----------------------QFVTKYNFSSQRGRMAAEKNAFSLLRKRKYGAAAAFFLLAEPPMMKSALNIIVTKMEDLSLALFVARLIKANRSSPGAINNDLTIGGSNGFSLRGFGGGGGFATMGQSVDIENDEPDTKYC--DWKPELS--------IFCKDLFQSHAIP---------DHVSDPCLQCVDLLWLDRPNDA--AMC 774
BLAST of mRNA_C-tenellus_contig8782.1.1 vs. uniprot
Match: B8CG37_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG37_THAPS) HSP 1 Score: 104 bits (260), Expect = 3.830e-19 Identity = 88/280 (31.43%), Postives = 128/280 (45.71%), Query Frame = 1 Query: 1309 WDEARALLLPVWVKDIGELRRVTEVAAANTFRQDKDLMSAALFFVILGKERTLLALAKADKPFVGSRALSGSERSLHTAGGRAEGASAGQRLERLLAHDFTTPQGRAVSEKNAYILLRKRRYKAAAAVFLLARPAMLKEALQVILVHTKDLQLALLVARLVERR--------DAEDIAAGEEGWNGEVGAESGGGWERVGEGLELLLDGASRKLLREEFLPTYDGEGATRRRVIASFGGTRSASPPPTPVGDHHKHQRDAFLEAVTLHWLGEPERALRAL 2124 W ARA+ +P WV+ L + E A ++ K +M AL++V + +TL A+A D+ G++ L + ++ HDF++ +GR +EKNAY LLRKR+Y AA+ FLLA P M+K AL VI KD+ LA +VARL+E DA I G + G GG G L+L DGA E+ P+ G + R V+ + G + + D +E+V L WL P A+ L Sbjct: 1924 WVMARAVGIPFWVRSKKTLVSIAEEIAQAIYKSTKSVMDCALYYVAMRNMKTLRAIAATDRSDSGTKFL-----------------------KFIIDHDFSSERGRKAAEKNAYSLLRKRKYATAASFFLLAEPPMIKTALDVIKSQMKDITLAFMVARLMENAPKSSAMPDDALTIGGGFNLSSMGGGGGFAGGGPIGGTSLDLEEDGAKFS----EWSPSL---GPSARSVLQTKGTSPAVE--------------DNCMESVKLLWLNRPNEAMLRL 2159
BLAST of mRNA_C-tenellus_contig8782.1.1 vs. uniprot
Match: K0SS84_THAOC (Rav1p_C domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SS84_THAOC) HSP 1 Score: 103 bits (256), Expect = 4.780e-19 Identity = 79/269 (29.37%), Postives = 117/269 (43.49%), Query Frame = 1 Query: 1309 WDEARALLLPVWVKDIGELRRVTEVAAANTFRQDKDLMSAALFFVILGKERTLLALAKADKPFVGSRALSGSERSLHTAGGRAEGASAGQRLERLLAHDFTTPQGRAVSEKNAYILLRKRRYKAAAAVFLLARPAMLKEALQVILVHTKDLQLALLVARLVERRDAEDIAAGEEGWNGEVGAESGGGWERVGEGLELLLDGASRKLLREEFLPTYDGEGATRRRVIASFGGTRSASPPPTPVGDHHKHQRD-AFLEAVTLHWLGEPERA 2112 W ARA+ LP WV+ L V E A ++ K++M AL+++ + + L A+A D+ G + L + ++ HDF++ +GR +EKNAY LLRKR+Y AA+ FLLA P M+K A+ VI + +D LA +VARLVE ++ S G +G GL L G F + +V+ + S V + RD +A+ L WLG P A Sbjct: 81 WASARAIGLPYWVRSDKALASVAEEIAQTIYKSTKNVMDCALYYIAMRNMKKLRAIAATDRSLSGKKFL-----------------------KFIMDHDFSSDRGRKAAEKNAYSLLRKRKYAHAASFFLLAEPPMIKTAIDVITMQLQDPSLAFMVARLVESTPKSSASS------------SNGDALTIGGGLSLSSMGGGGGFAGPGFSSEFSTSREEASKVVKFDRWSPKLSKSSRLVLKPSQSNRDDVCFDAIQLLWLGRPNEA 314
BLAST of mRNA_C-tenellus_contig8782.1.1 vs. uniprot
Match: A0A7S2UHS1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHS1_9STRA) HSP 1 Score: 103 bits (256), Expect = 8.390e-19 Identity = 66/164 (40.24%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 1303 LTWDEARALLLPVWVKDIGELRRVTEVAAANTFRQDKDLMSAALFFVILGKERTLLALAKADKPFVGSRALSGSERSLHTAGGRAEGASAGQRLERLLAHDFTTPQGRAVSEKNAYILLRKRRYKAAAAVFLLARPAMLKEALQVILVHTKDLQLALLVARLVE 1794 L W R LP W++ ELR V E +++ KD+M +LF+V + RTL LA D+ G L + +L HDF++ +GR +EKNAY LLRKRRY AA+ FLLA P ML AL++I+ DL LA LVARLVE Sbjct: 60 LDWPTVREARLPFWLRSNSELRTVAEEVGQGIYKKTKDVMECSLFYVAMRNMRTLKNLAATDRSESGKTFL-----------------------KFILNHDFSSLKGRKAAEKNAYSLLRKRRYGVAASFFLLAEPPMLNTALEIIVSQMGDLNLAFLVARLVE 200 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8782.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8782.1.1 >prot_C-tenellus_contig8782.1.1 ID=prot_C-tenellus_contig8782.1.1|Name=mRNA_C-tenellus_contig8782.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=752bp MALSLVRSRRQPLPVVQSGGGASAAHGGGGSGVSGDPVPKMPAELPLSRMback to top mRNA from alignment at C-tenellus_contig8782:69..5130- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8782.1.1 ID=mRNA_C-tenellus_contig8782.1.1|Name=mRNA_C-tenellus_contig8782.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5062bp|location=Sequence derived from alignment at C-tenellus_contig8782:69..5130- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8782:69..5130- >mRNA_C-tenellus_contig8782.1.1 ID=mRNA_C-tenellus_contig8782.1.1|Name=mRNA_C-tenellus_contig8782.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=2256bp|location=Sequence derived from alignment at C-tenellus_contig8782:69..5130- (Choristocarpus tenellus KU2346)back to top |