mRNA_C-tenellus_contig8619.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8619.2.1 vs. uniprot
Match: D7FMM9_ECTSI (Similar to ATP synthase mitochondrial F1 complex assembly factor 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM9_ECTSI) HSP 1 Score: 260 bits (665), Expect = 1.490e-76 Identity = 134/236 (56.78%), Postives = 167/236 (70.76%), Query Frame = 2 Query: 434 PRTNIAMFIAISELSHGRRRFSSTPDVTHQKIKGRGRFYKQVSVRE---------------VDGRTRKWEILLDSRTLKTPARRPLMFDSMELAMLVASEWDAQTNVTTGIEPATMPLMSLAATALDQIVPHRESTVSTCLKFLPTDTICFLVAQPDPALARKQAELWSPLREWIKKELAIEVATTKDIFQRPQHSPDAVPRAREVLEATDAWTLAAIQSVAMECKSLVIALALAF 1096 P N S + +R SS P++THQ+IKGR RFYK V++RE V ++ +WEILLDSR LKTP RRPL FDS ELAM VA+EWDAQ + + GIEPA MPLM+LA+TALDQ+ RE TV+TCLK+LPTDT+CFL PDP +AR+Q +LWSPLR+W ++ L I VATT +I + PQH P+A+ RAR++LE+ D W LAA+QS MECKSLVIALAL F Sbjct: 56 PHLNGVNSTVPSRVGGPQREMSSAPELTHQRIKGRSRFYKTVTIREIVADKAGDEASAAAAVGDKSPRWEILLDSRVLKTPGRRPLQFDSPELAMAVAAEWDAQ-DTSKGIEPAVMPLMALASTALDQVASDREKTVATCLKYLPTDTVCFLSPDPDPVIARRQRQLWSPLRDWTEEALGIPVATTTEIHRTPQHPPEALARARDLLESLDEWGLAAVQSATMECKSLVIALALLF 290
BLAST of mRNA_C-tenellus_contig8619.2.1 vs. uniprot
Match: A0A835YM22_9STRA (ATP synthase-like protein mitochondrial F1 complex assembly factor 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM22_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.760e-54 Identity = 103/213 (48.36%), Postives = 138/213 (64.79%), Query Frame = 2 Query: 488 RRFSSTPDVTHQKIKGRGRFYKQVSVREV---DGRTRKWEILLDSRTLKTPARRPLMFDSMELAMLVASEWDAQTNVTTGIEPATMPLMSLAATALDQIVPHRESTVSTCLKFLPTDTICFLVAQPDPALARKQAELWSPLREWIKKELAIEVATTKDIFQRPQHSPDAVPRAREVLEATDAWTLAAIQSVAMECKSLVIALALAFGHIAPQR 1117 RR S D HQKIKGR RFYK VSV +V D +W++LLD+R L+TPARRPL F + LA VA+EWDAQT +TGIEPA MPLM+L ATALDQ+ + E T+ + +L TDT+CF D + ++Q + W PL W K L E+ T+ RPQH P+ V +AR ++ D + L+A+Q + MECKSLV+ALA+A+ I ++ Sbjct: 43 RRNMSVQDTVHQKIKGRRRFYKIVSVDQVKASDSSGPQWQVLLDNRPLRTPARRPLHFPTEALARAVAAEWDAQTR-STGIEPAVMPLMTLCATALDQVAVNPEPTIDNVMNYLHTDTVCFFAPDDDRIILKRQKKTWGPLHTWASKALGGELVKTQHAIARPQHPPEVVDQARAIVAGLDPFALSAVQCITMECKSLVVALAVAYRQITMEQ 254
BLAST of mRNA_C-tenellus_contig8619.2.1 vs. uniprot
Match: A0A7S2WTT0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTT0_9STRA) HSP 1 Score: 162 bits (409), Expect = 6.830e-41 Identity = 101/236 (42.80%), Postives = 141/236 (59.75%), Query Frame = 2 Query: 518 HQKIKGRGRFYKQVSVREVDGR-TRKWEILLDSRTLKTPARRPLMFDSMELAMLVASEWDAQTNVTTGIEPATMPLMSLAATALDQIVPHRESTVSTCLKFLPTDTICFLVAQPDPA--LARKQAELWSPLREWIKKELAIEVATTKDIFQRPQHSPDAVPRAREVLEATDAWTLAAIQSVAMECKSLVIALALAFGHIAP---QRVSVFEEKC*KDYCDLLKRGAKI-YVVSKVR 1204 H IKGR RFYKQV+V+ +DG K+E+ LD R+L+TP RR + FDS ELAM VA EWDAQ GIEPATMPLMSL +T LDQ R + ++ LKFLPTDT CF + L R+Q + + L +W+ + +E++TT I + +H +AV R +L+A D L A+Q ME KS+V+ALAL + P + ++ EE+ + L++ G + SKV+ Sbjct: 34 HPTIKGRRRFYKQVAVQALDGSGATKYEVQLDGRSLRTPGRRAMHFDSQELAMAVALEWDAQAPE--GIEPATMPLMSLMSTWLDQTSQDRPTVITGALKFLPTDTCCFFNEEAPATRNLVRRQEKHFFKLLDWLADDWGVELSTTNGIT-KVKHEDEAVRRVEAMLDALDDAALTAVQCATMEGKSVVLALALVLRRVTPKAAEEIARLEEEFQMEQWGLVEGGHDLDRAASKVQ 266
BLAST of mRNA_C-tenellus_contig8619.2.1 vs. uniprot
Match: A0A6V1NN32_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NN32_HETAK) HSP 1 Score: 160 bits (406), Expect = 1.310e-40 Identity = 83/196 (42.35%), Postives = 125/196 (63.78%), Query Frame = 2 Query: 518 HQKIKGRGRFYKQVSVREVDGRTRKWEILLDSRTLKTPARRPLMFDSMELAMLVASEWDAQTNVTTGIEPATMPLMSLAATALDQIVPHRESTVSTCLKFLPTDTICFLVAQPDPALARKQAELWSPLREWIKKELAIEVATTKDIFQRPQHSPDAVPRAREVLEATDAWTLAAIQSVAMECKSLVIALALAFGHI 1105 HQ IKGR RFY VSV+ V+ + K+EI LD R+LKTP R + F + + A+ VA+EWD+QT GIEP TMPLM+L ATA+D I T+ LK+ PTDT C+ + + L ++Q +L P+ E + K +++ATT + + H P+++ + ++++E+ D + L+A+Q MECKSLV+ L+L G I Sbjct: 45 HQTIKGRKRFYNNVSVKRVE--SGKFEIQLDGRSLKTPGRNSMHFPNEQYALAVAAEWDSQTEKK-GIEPGTMPLMTLTATAIDHISVDPSPTLDNILKYFPTDTACYFANEEERILRKRQIKLLDPVIEKLSKTFGVDIATTDAMITKVPHPPESISKMKDIVESLDPFALSALQCATMECKSLVLGLSLTSGLI 237
BLAST of mRNA_C-tenellus_contig8619.2.1 vs. uniprot
Match: A0A482S1E3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1E3_9ARCH) HSP 1 Score: 154 bits (390), Expect = 2.870e-38 Identity = 88/199 (44.22%), Postives = 119/199 (59.80%), Query Frame = 2 Query: 512 VTHQKIKGRGRFYKQVSVREVDGRTRKWEILLDSRTLKTPARRPLMFDSMELAMLVASEWDAQTNVTTGIEPATMPLMSLAATALDQIVPHRESTVSTCLKFLPTDTICFLVAQPDPALARKQAELWSPLREWIKKELAIEVATTKDIFQRPQHSPDAVPRAREVLEATDAWTLAAIQSVAMECKSLVIALALAFGHIA 1108 +THQ GR RFYK V V+++ K+ I LD RTL+TPAR L + LA+ +A+EWDAQT+ GIEP TMPLM+LA+TA+DQI PH E T+ T L ++PTD+ + + D L KQ P+ L I VATT+D+ Q+ H + L D +TLAA+QS E KSLV++L+L G +A Sbjct: 48 LTHQGFAGRKRFYKHVGVKKIA--ENKFGIELDGRTLRTPARNNLHLPTFSLALAIAAEWDAQTDQRKGIEPVTMPLMTLASTAIDQIAPHPEGTIETVLSYMPTDSALYFTTEQDRYLYNKQQTHLLPILSKFNDALQIRVATTQDMSQKISHPVGVQEKIAFFLSKLDCFTLAAVQSAVKESKSLVLSLSLV-GKLA 243
BLAST of mRNA_C-tenellus_contig8619.2.1 vs. uniprot
Match: A0A5J4Y0W9_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y0W9_9CHLO) HSP 1 Score: 138 bits (348), Expect = 9.600e-33 Identity = 88/229 (38.43%), Postives = 132/229 (57.64%), Query Frame = 2 Query: 542 RFYKQVSVREVDGRTRKWEILLDSRTLKTPARRPLMFDSMELAMLVASEWDAQTNVTTGIEPATMPLMSLAATALDQIVPHRESTVSTCLKFLPTDTICFLVAQPDPA-LARKQAELWSPLREWIKKELAIEVATTKDIFQRPQHSPDAVPRAREVLEATDAWTLAAIQSVAMECKSLVIALALAFGHIAPQRVSV---FEEKC*KDYCDLLKRGAKIYVVS-KVRDSG 1213 RFYK V V G+ W+I L+ R LKTPAR+PL+ S LA+ +A+EW+ Q N I P TMPLMSLAATA+DQ P R+ T L++L TD +C + +P LA +QA++++P+ W ++ ++ A + IF Q++ D R+ L+ D W LAA++S+A C+S+V+ALA+ G + Q EE D L++ G I + +VR +G Sbjct: 57 RFYKYVGVEPAPGQGNGWQITLNDRALKTPARQPLIVPSYPLALAIAAEWEWQDN---RIRPFTMPLMSLAATAIDQPKP-RQKVTDTMLQYLDTDALC---CREEPGKLANQQAKIYNPVLAWANQQFDVKFAVSNSIFGAHQNA-DTHQAVRQFLQGLDDWHLAAMESLASSCRSVVLALAVMHGQLDVQAAITAARLEETHQMDEWGLVEGGHDIDIADMQVRIAG 277
BLAST of mRNA_C-tenellus_contig8619.2.1 vs. uniprot
Match: A0A024TVQ1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TVQ1_9STRA) HSP 1 Score: 130 bits (328), Expect = 3.400e-30 Identity = 87/240 (36.25%), Postives = 126/240 (52.50%), Query Frame = 2 Query: 392 LMRHSAGQIEGRTPPRTNIAMFIAISELSHGRRRFSSTPDVTHQKIKGRGRFYKQVSVR-EVDGRTRKWEILLDSRTLKTPARRPLMFDSMELAMLVASEWDAQTNVTTGIEPATMPLMSLAATALDQIVPHRESTVSTCLKFLPTDTICFLV-AQPDPALARKQAELWSPLREWIKKELAIEVATTKDIFQRPQHSPDAVPRAREVLEATDAWTLAAIQSVAMECKSLVIALALAFGHI 1105 +M+ + ++ P ++A F A +E G + KI GR RFYK V + E DG + I LD + ++TP+R L + LA VA EWDAQ I+P TMP+M+LA+TALD + + +K+L TDTICF V +Q LA +Q + W PLR+W + E E+ + +HSP AV R + + D + L A + + ECKS+V+ALAL HI Sbjct: 1 MMQRATARLAANAPK--HVATFSAAAETPRG-----GVSSGSGAKIAGRSRFYKAVGIEAEGDG----YCITLDGKKVRTPSRSLLQLPTKSLAAAVAKEWDAQHET---IQPTTMPIMTLASTALDHW--DFDFIIEEIMKYLQTDTICFPVESQHQEKLAARQEKKWQPLRKWFETEFGGELDINYGTINKLEHSPVAVENVRAFVYSMDKFELMAFRLIVRECKSMVVALALLKRHI 224
BLAST of mRNA_C-tenellus_contig8619.2.1 vs. uniprot
Match: B6IQX2_RHOCS (Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IQX2_RHOCS) HSP 1 Score: 128 bits (321), Expect = 9.190e-30 Identity = 75/188 (39.89%), Postives = 104/188 (55.32%), Query Frame = 2 Query: 542 RFYKQVSVREVDGRTRKWEILLDSRTLKTPARRPLMFDSMELAMLVASEWDAQTNVTTGIEPATMPLMSLAATALDQIVPHRESTVSTCLKFLPTDTICFLVAQPDPALARKQAELWSPLREWIKKELAIEVATTKDIFQRPQHSPDAVPRAREVLEATDAWTLAAIQSVAMECKSLVIALALAFGHI 1105 R Y++V V+G WE+ LD R+LK+PAR PL+ + LA VA+EWDAQT +EP +MP+M LA+T +D+IVP R + V + TD +C+ P +AR Q E W PL +W+ + T I RPQ S + R +EA D W L+ +Q+ SLV+ALAL G I Sbjct: 3 RVYREVGTAAVEGG---WEVRLDGRSLKSPARAPLVLPTRALAEAVAAEWDAQTET---VEPHSMPMMQLASTTVDRIVPQRAAIVDGVAAYAGTDLLCYRADHPRSLVAR-QEEAWQPLLDWVASRYDAMLLPTTGIVHRPQ-SDLTLAALRRAVEAQDDWRLSGLQNAVALSGSLVVALALLEGRI 182
BLAST of mRNA_C-tenellus_contig8619.2.1 vs. uniprot
Match: A0A1Y1I6T8_KLENI (F1-ATP synthase assembly protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I6T8_KLENI) HSP 1 Score: 129 bits (325), Expect = 2.440e-29 Identity = 77/194 (39.69%), Postives = 116/194 (59.79%), Query Frame = 2 Query: 542 RFYKQVSVREVDGRTRKWEILLDSRTLKTPARRPLMFDSMELAMLVASEWDAQTNVTTGIEPATMPLMSLAATALDQIVPHRESTVSTCLKFLPT-DTICFLVAQP-DPALARKQAELWSPLREWIKKELAIEVATTKDIFQRPQHSPDAVPRAREVLEATDAWTLAAIQSVAMECKSLVIALALAFGHIAPQR 1117 R+YK V V E + T + + LD + L +PARRPL+ + ELA+ +A+EW+ Q + I P TMPLM LA+TA D + R + V +K+ T D +C V P + L RKQAE+W PL +W+++EL + T+ IF Q P+ V +E+L + LAA+ ++A SLVIALA++ GH+ P++ Sbjct: 91 RWYKHVGVEETEDST--FHVTLDGKRLPSPARRPLVLPTKELALAIAAEWEWQDKKS--IRPFTMPLMKLASTATDLVPLQRNAIVDNLMKYFRTSDAVC--VRDPGEGRLKRKQAEIWDPLLDWMQQELGVRPVTSGSIFGAEQ-PPEVVRTVQELLHRKSDFRLAAVDALASSAHSLVIALAVSRGHLGPRK 277
BLAST of mRNA_C-tenellus_contig8619.2.1 vs. uniprot
Match: A0A3S0JIS5_9PROT (ATPase n=1 Tax=Azospirillum griseum TaxID=2496639 RepID=A0A3S0JIS5_9PROT) HSP 1 Score: 125 bits (315), Expect = 6.010e-29 Identity = 74/190 (38.95%), Postives = 102/190 (53.68%), Query Frame = 2 Query: 542 RFYKQVSVREVDGRTRKWEILLDSRTLKTPARRPLMFDSMELAMLVASEWDAQTNVTTGIEPATMPLMSLAATALDQIVPHRESTVSTCLKFLPTDTICFLVAQPDPALARKQAELWSPLREWIKKELAIEVATTKDIFQRPQHSPDAVPRAREVLEATDAWTLAAIQSVAMECKSLVIALALAFGHIAP 1111 RFYK V V+G +++ LD R +++PA+ L F + LA VA+EWDAQ I P TMPLM LA+TA+D + R + + TD +C+ P P L +Q LW PL +W+ + + RPQ P A+ R V+E D W LAA+Q+V C SLV+ALAL G I+P Sbjct: 3 RFYKAAGVAAVEGGG--FQVQLDGRPIRSPAKAALTFPTRALADAVAAEWDAQGET---IHPHTMPLMQLASTAVDLVPAKRGEIIEAVAAYAETDLVCYRAEHPQP-LVERQTRLWQPLLDWVAVRHDAALVVCHGLMPRPQ-PPAALRALRAVVEGCDDWGLAALQTVTGACGSLVVALALLEGRISP 185 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8619.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8619.2.1 >prot_C-tenellus_contig8619.2.1 ID=prot_C-tenellus_contig8619.2.1|Name=mRNA_C-tenellus_contig8619.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=276bp MASASWRWSFPLTGWKGAMIAQTRRLMRHSAGQIEGRTPPRTNIAMFIAIback to top mRNA from alignment at C-tenellus_contig8619:514..5139- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8619.2.1 ID=mRNA_C-tenellus_contig8619.2.1|Name=mRNA_C-tenellus_contig8619.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4626bp|location=Sequence derived from alignment at C-tenellus_contig8619:514..5139- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8619:514..5139- >mRNA_C-tenellus_contig8619.2.1 ID=mRNA_C-tenellus_contig8619.2.1|Name=mRNA_C-tenellus_contig8619.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=828bp|location=Sequence derived from alignment at C-tenellus_contig8619:514..5139- (Choristocarpus tenellus KU2346)back to top |