mRNA_C-tenellus_contig856.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: D8LKX0_ECTSI (GpcrRhopsn4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX0_ECTSI) HSP 1 Score: 300 bits (768), Expect = 6.970e-95 Identity = 154/308 (50.00%), Postives = 202/308 (65.58%), Query Frame = 2 Query: 227 SHGKVWQGSVRLSPRRPFSYITSFTYDTGKGKVEVSIDDEYIKNAPSGTKVLAVLDEDWSTFLSEDDCEARERLNRWEVTLEP-----GKTIFKTSISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKV-------CAGFIAFLIGLLVGI----RKRSHFSDMIHSYSLL 1102 S K+W+GS RLS +P+ +TSF +D G G+++V+ + P GTK++A+LDEDW FL+E+ C R+RLNRW V LEP G +F T+I Q++RPH WYLV+S CN GS K+ R++++A+F Q SYED L ++IPL+L FT AAA IG LF++RR+E G HPTL +++AL MHWVFL VHTLHLR++A NG G LLDV GE+LH GGQLLVSYVLVGLAYGWTLSS AVQKY+PDDK C GF+ + +L + +SH D +Y L+ Sbjct: 24 SEAKLWRGSARLSASKPWMALTSFAFDIGTGRIDVTFPQGSLGGVPEGTKMIAILDEDWPDFLAEERCMVRDRLNRWLVPLEPEATKDGDAVFGTTIRQNVRPHNWYLVVSHCNARGSPP----KRTRIEMSASFTQQGG----SHISYEDKLTTKVIPLMLMAFTAAAAIIGNLFVKRRREGGGMHPTLQFMLAALCMHWVFLLVHTLHLRSFAANGTGYVLLDVGGEVLHWGGQLLVSYVLVGLAYGWTLSSRAVQKYVPDDKSIVYLLAGCLGFLHLMFVILGRMSDDHHAKSHSLDSAPAYFLV 323
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A7S1RV62_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RV62_ALECA) HSP 1 Score: 127 bits (319), Expect = 5.030e-29 Identity = 98/301 (32.56%), Postives = 147/301 (48.84%), Query Frame = 2 Query: 188 LVLFALLALAFPVSHGKVWQGSVRLSPRRP---FSYITSFTYDTGKGKVEVSIDDEYIKN-APSGTKVLAV-LDEDWSTFLS-EDDCEARERLNR-WEVTLEPGKTIFKTS---ISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIGLLVGIRK 1060 L+L +LL L K+ G VR+ RP + Y++ F Y G G V + KN A G L V LDEDW + +D CE + + E+ + P + S +SQ IRPH+WY VLS CN + + R + AT QD G+ + MLPA L L + FTV + KL + + + HP +W++ S + +H++ A HTLHL +Y NG GL+ +DV EI I Q++ + +L+ +A G+TL + + VC +A + +LVG K Sbjct: 28 LLLASLLQLWLEAGEAKLQTGQVRIKGPRPQNRWKYLSKFGYGMGTGSYTVRLQLRQPKNVATEGKATLEVYLDEDWEKVDAVQDVCERPKHARKVQEIVVPPSGEWGEWSNGTLSQWIRPHIWYFVLSDCN---DSLPNLTHNLRYEFHAT--QDG--GSEFSIEMQWMLPAHL--LFVLCFTVFVWYFSKLTVGFFRSAGSVHPVIWILTSVVVLHYLAQAFHTLHLVSYRSNGAGLKAMDVFSEIFFILSQVIQTSLLILIALGYTLLQSCIGELDLMIPVCF-MVAVIHVMLVGFGK 318
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A7S4VID5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VID5_9DINO) HSP 1 Score: 111 bits (277), Expect = 2.730e-23 Identity = 97/310 (31.29%), Postives = 143/310 (46.13%), Query Frame = 2 Query: 185 TLVLFALLALAFPVSHGKVWQGSVRLSPRR---PFSYITSFTYDTGKGKVEVSIDDEYIKNAPSGTKVL--AVLDEDWSTFLS-EDDCEARERLNRWE-VTLEP----GKTIFKTSISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQR---RKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIG----LLVGIRK 1060 TL+ A L P+ K+ VRL R + YI+ F Y G G V + KN + KV LDEDW + ED CE + + +T+ P G+ T +SQ IRPH+WY V+S CN + + R + LQD G+ MLPA L LFV T A F+ + + + + + HP +W++ S + +H++ L +HTLHL Y NG GL LDV+ EI Q+ + +L+ +A G+TL + + VC F++G +LVG K Sbjct: 9 TLLCLASLLSLLPLDEAKLQSAQVRLKGPRLQNRWKYISKFGYSLGTGTFGVRLQLRRPKNVATEGKVSLEVYLDEDWKRVEAIEDVCERPRHARKVQNITVPPSGEWGEWTNDT-LSQWIRPHIWYFVISDCN---DSLPNLTHSVRFEFHG--LQDG--GSEFSVEMRGMLPAHL----LFV-TGFAVFVLRFYRKTVAFSRSAGSVHPVIWILSSVVILHFLALLLHTLHLLVYRSNGVGLVALDVLSEIFFALSQVTQTSLLILIALGYTLLQSCIGELDLMIPVC-----FMVGVIHVMLVGFGK 300
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A813IZV2_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IZV2_POLGL) HSP 1 Score: 100 bits (248), Expect = 1.730e-19 Identity = 81/293 (27.65%), Postives = 136/293 (46.42%), Query Frame = 2 Query: 224 VSHGKVWQGSVRLS-PRRPFS--YITSFTYDTGKGKVEVSIDDEYIKN--APSGTKVLAVLDEDWSTFLSEDDCEARERLNRWEVTLEPGK-----TIFKTSISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIG----LLVGIRK 1060 ++ K+ G VRLS PR+ + Y++ F YD G G V + K A + ++ LDE W +E D AR+ L + + + G S+SQS+RPH+WY +S C++ R+K LQ+ N +FS E L L FTV F + + +++ HP +W++ + ++ HTLHL AY +G+G++ L+V+ EIL + Q+ + +L+ + G+TL + + +C F++G +LVG K Sbjct: 43 LAAAKLVGGPVRLSGPRQEYHWRYLSKFGYDIGTGSYSVRLQLHQPKTIAAEAPVQIEIYLDEVWPAVEAEKDVCARKALAKQVLNITVGSDGNWSAWLTGSLSQSVRPHIWYFAVSDCDKSLQNFTH-----RLKFEFHALQE----NGSEFSIEMRGMLLCNSLFLACFTVFIWFFVQRTLDFNRKTGNVHPVIWVLAIGMLTQYLAQVFHTLHLWAYKFDGDGIKPLEVLSEILFMLSQVTQTSLLILIGLGYTLLQSRIGELDLMIPMC-----FMVGVIHIMLVGFGK 321
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A812N9B3_9DINO (Tmem145 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812N9B3_9DINO) HSP 1 Score: 99.4 bits (246), Expect = 6.350e-19 Identity = 81/295 (27.46%), Postives = 143/295 (48.47%), Query Frame = 2 Query: 224 VSHGKVWQGSVRLS-PRRP--FSYITSFTYDTGKGKVEVSIDDEYIKNAPSGT--KVLAVLDEDWSTFLSEDD-CEARERLNRWE-VTLEPGKTIFKTS---ISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYE--DMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIG----LLVGIRK 1060 ++ GK G VR++ P++ + Y++ F Y+TG G K+ P ++ LDE W +E + C+ ++R + +++ PG + S +SQ+IRPH+WY V+S C + + K F + N +FS E ML A ++ L+ F+ V + K + K + HP +W + S + +V +HT+HL AY +G+GL+ +V+ EIL + Q++ + +L+ +A G+TL + + +C F+IG +LVG K Sbjct: 34 IAGGKKIAGPVRIAGPKKENQWRYLSKFGYETGTGSFNFRFQLAAPKSIPEAAVLQLEVYLDEHWPDVEAEPNFCDRQKRAKQVRNISIGPGSNWTEWSQGTLSQNIRPHIWYFVISDCQQSLANFTHRLK---------FEFHAQQPNGSEFSVEMRGMLLANVLFLVSFI--VFLHWFAKRTLAFGKSAGYVHPVIWTLASGMITQFVAQTMHTIHLLAYKYDGDGLKACEVLSEILFMLAQVIQTSLLILIALGYTLLQSKIGELDLMIPMC-----FMIGVIHIMLVGFGK 312
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A813FXL4_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FXL4_POLGL) HSP 1 Score: 100 bits (248), Expect = 6.600e-19 Identity = 81/293 (27.65%), Postives = 136/293 (46.42%), Query Frame = 2 Query: 224 VSHGKVWQGSVRLS-PRRPFS--YITSFTYDTGKGKVEVSIDDEYIKN--APSGTKVLAVLDEDWSTFLSEDDCEARERLNRWEVTLEPGK-----TIFKTSISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIG----LLVGIRK 1060 ++ K+ G VRLS PR+ + Y++ F YD G G V + K A + ++ LDE W +E D AR+ L + + + G S+SQS+RPH+WY +S C++ R+K LQ+ N +FS E L L FTV F + + +++ HP +W++ + ++ HTLHL AY +G+G++ L+V+ EIL + Q+ + +L+ + G+TL + + +C F++G +LVG K Sbjct: 697 LAAAKLVGGPVRLSGPRQEYHWRYLSKFGYDIGTGSYSVRLQLHQPKTIAAEAPVQIEIYLDEVWPAVEAEKDVCARKALAKQVLNITVGSDGNWSAWLTGSLSQSVRPHIWYFAVSDCDKSLQNFTH-----RLKFEFHALQE----NGSEFSIEMRGMLLCNSLFLACFTVFIWFFVQRTLDFNRKTGNVHPVIWVLAIGMLTQYLAQVFHTLHLWAYKFDGDGIKPLEVLSEILFMLSQVTQTSLLILIGLGYTLLQSRIGELDLMIPMC-----FMVGVIHIMLVGFGK 975
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A812RXC2_9DINO (Gpr180 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812RXC2_9DINO) HSP 1 Score: 96.7 bits (239), Expect = 3.570e-18 Identity = 82/295 (27.80%), Postives = 140/295 (47.46%), Query Frame = 2 Query: 224 VSHGKVWQGSVRLS-PRRP--FSYITSFTYDTGKGKVEVSIDDEYIKNAPSGT--KVLAVLDEDWSTFLSEDD-CEARERLNRWE-VTLEPGKTIFKTS---ISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYE--DMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIG----LLVGIRK 1060 ++ GK G VR+S P++ + Y++ F Y+ G G K+ P ++ LDE W +E + CE ++R + +++ PG + S +SQ+IRPH+WY V+S C + + K F + N +FS E ML A + L L F V + K + K + HP +W + + + +V +HT+HL AY +G+GL+ +V+ EIL + Q++ + +L+ +A G+TL + + +C F+IG +LVG K Sbjct: 34 IAAGKKIGGPVRISGPKKENQWRYLSKFGYEIGTGSFNFRFQLAAPKSIPEAAVLQLEVYLDEHWPEVEAEPNFCERQKRAKQVRNISIGPGANWTEWSQGTLSQNIRPHIWYFVISDCQQALANFTHRLK---------FEFHAQQPNGSEFSVEMRGMLLANV--LFLASFVVFLHWFTKRTLAFGKSAGYVHPVIWTLAAGMITQFVAQTMHTIHLLAYKYDGDGLKACEVLSEILFMLAQVIQTSLLILIALGYTLLQSKIGELDLMIPMC-----FMIGVIHIMLVGFGK 312
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A812WF66_SYMPI (Gpr180 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812WF66_SYMPI) HSP 1 Score: 93.6 bits (231), Expect = 4.680e-17 Identity = 73/270 (27.04%), Postives = 124/270 (45.93%), Query Frame = 2 Query: 284 YITSFTYDTGKGKVEVSIDDEYIKNAPSGT--KVLAVLDEDWSTFLSEDD-CEARERLNRWE-VTLEPGKTIFKTS---ISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIG----LLVGIRK 1060 Y++ F Y+TG G K+ P ++ LDE W +E + CE ++R + +++ PG + S +SQ+IRPH+WY VLS C + + K F + N +FS E L L F V + K + K + HP +W + + + ++ +HT+HL AY +G+GL+ +V+ EIL + Q++ + +L+ +A G+TL + + +C F+IG +LVG K Sbjct: 57 YLSKFGYETGTGSFNFRFQLAAPKSIPEPAVLQLEVYLDEHWPDVEAEPNFCERQKRAKQVRNISIGPGSNWTEWSQGTLSQNIRPHIWYFVLSDCQQSLANFTHRLK---------FEFHAQQPNGSEFSVEMRWMLLANVLFLASFIVFLHWFTKRTLAFGKSAGYVHPVIWTLAAGMITQFIAQTMHTIHLLAYKYDGDGLKACEVLSEILFMLAQVIQTSLLILIALGYTLLQSKIGELDLMIPMC-----FMIGVIHIMLVGFGK 312
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A812JDB5_9DINO (Gpr180 protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812JDB5_9DINO) HSP 1 Score: 93.2 bits (230), Expect = 4.750e-17 Identity = 84/309 (27.18%), Postives = 138/309 (44.66%), Query Frame = 2 Query: 203 LLALAFPVSHGKVWQGSVRLSPRRPFSYITSFTYDTGKGKVEVSIDDEYIKNAPSGTKVL---AVLDEDWSTFLSEDDCEARERLNR--WEVTLEPG---KTIFKTSISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCA-GFIAFLIGLLVGIRKRSHFSDMIHSYSLL 1102 L LA+ K+ + L + + +++ F Y G G + + P G L + LDEDWS LS +D R R +R W + + + + ++R HVWY VL C + F+ L DS + Q++ LPA ++ LL F+ + F + + R HP + +++ + + + ++H LHL Y +G+GLRLL++V E+L + QL+ S +L+ + YG+TL + PD V A G A L +LV + K +D H Y L Sbjct: 11 LCLLAWIPLEAKLQVAQLHLGGVQRWGFMSKFGYAPGNGTYRLRVRVPSQTRRPDGNVTLRFESYLDEDWSEVLSIEDPCLRTRKSRKTWNLNVPSNGQWSDPWNGQVRNTVRSHVWYFVLLHCGEKLKDHSVRFEYEIRHLNEG---DSHFTIEKQWT----LPANVLSLLCFL-AFSILFARRCISEMRGVGK-LHPVIQGLVAVVGLELLAQSLHALHLLRYGYDGKGLRLLEIVAELLFVLSQLVQSTLLLLIGYGYTLLPVDIA---PDMVVLAFGIGAVLHIVLVLLIKGEDDADKFHDYESL 307
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A813ECU5_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813ECU5_POLGL) HSP 1 Score: 87.4 bits (215), Expect = 5.820e-15 Identity = 85/332 (25.60%), Postives = 154/332 (46.39%), Query Frame = 2 Query: 167 MVRAIVTLVLFALLALAFPVSHGKVWQGSVRLSPRRP-----FSYITSFTYDTGKGKVEVSIDDE-----YIKNAPSGTKVLA--VLDEDWSTFLS-EDDCEARERLNRW-EVTLEPGKTIFKTS---ISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKE---SDGA-HPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIGLLVGI--RKRSHFSDMIHSY 1093 M R+ VL AL L P + G + S+RL R + + F+Y G + + + E K + + T VLA DE W LS + C +++ E+++ P + + S + +R HVWY LS C A + + ++ LQ + G+ ++ LPA +I L+ A + +QR ++ S GA H +W++ +++ ++ A+H +HL Y+ NG+G++ L+++ E+L I GQ++ + L+ + G+TL SE +Q D + G + +I + V R+ +D HS+ Sbjct: 1 MARSKSCAVLLALACLGLPSADGMLQAFSLRLGGVRAGEEVNWEFFAKFSYGIGTSRYKYRLRLEGPLHGMFKPSQNVT-VLAEHYFDEHWPVVLSIPEKCARKDKAQGTRELSIPPDGSWTEWSGGTVEHVVRSHVWYYTLSSCQ------ASLGRVHKIGFEFEALQPN--GSHFSVEHQWTLPANIISLIFM------AVFSCILVQRCRDFARSAGAMHMVMWVLAGIVAVQFIAQALHAVHLVGYSRNGQGVKALEILSEMLTISGQMVEATFLIIIGTGYTLQSEGLQL---DWVIPVGGLIIIIHVCVIALSRQLDGAADKFHSH 314 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig856.3.1 >prot_C-tenellus_contig856.3.1 ID=prot_C-tenellus_contig856.3.1|Name=mRNA_C-tenellus_contig856.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=313bp MVRAIVTLVLFALLALAFPVSHGKVWQGSVRLSPRRPFSYITSFTYDTGKback to top mRNA from alignment at C-tenellus_contig856:13263..16053+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig856.3.1 ID=mRNA_C-tenellus_contig856.3.1|Name=mRNA_C-tenellus_contig856.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2791bp|location=Sequence derived from alignment at C-tenellus_contig856:13263..16053+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig856:13263..16053+ >mRNA_C-tenellus_contig856.3.1 ID=mRNA_C-tenellus_contig856.3.1|Name=mRNA_C-tenellus_contig856.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=939bp|location=Sequence derived from alignment at C-tenellus_contig856:13263..16053+ (Choristocarpus tenellus KU2346)back to top |