mRNA_C-tenellus_contig856.3.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig856.3.1
Unique NamemRNA_C-tenellus_contig856.3.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: D8LKX0_ECTSI (GpcrRhopsn4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX0_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 6.970e-95
Identity = 154/308 (50.00%), Postives = 202/308 (65.58%), Query Frame = 2
Query:  227 SHGKVWQGSVRLSPRRPFSYITSFTYDTGKGKVEVSIDDEYIKNAPSGTKVLAVLDEDWSTFLSEDDCEARERLNRWEVTLEP-----GKTIFKTSISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKV-------CAGFIAFLIGLLVGI----RKRSHFSDMIHSYSLL 1102
            S  K+W+GS RLS  +P+  +TSF +D G G+++V+     +   P GTK++A+LDEDW  FL+E+ C  R+RLNRW V LEP     G  +F T+I Q++RPH WYLV+S CN  GS      K+ R++++A+F Q          SYED L  ++IPL+L  FT AAA IG LF++RR+E  G HPTL  +++AL MHWVFL VHTLHLR++A NG G  LLDV GE+LH GGQLLVSYVLVGLAYGWTLSS AVQKY+PDDK        C GF+  +  +L  +      +SH  D   +Y L+
Sbjct:   24 SEAKLWRGSARLSASKPWMALTSFAFDIGTGRIDVTFPQGSLGGVPEGTKMIAILDEDWPDFLAEERCMVRDRLNRWLVPLEPEATKDGDAVFGTTIRQNVRPHNWYLVVSHCNARGSPP----KRTRIEMSASFTQQGG----SHISYEDKLTTKVIPLMLMAFTAAAAIIGNLFVKRRREGGGMHPTLQFMLAALCMHWVFLLVHTLHLRSFAANGTGYVLLDVGGEVLHWGGQLLVSYVLVGLAYGWTLSSRAVQKYVPDDKSIVYLLAGCLGFLHLMFVILGRMSDDHHAKSHSLDSAPAYFLV 323          
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A7S1RV62_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RV62_ALECA)

HSP 1 Score: 127 bits (319), Expect = 5.030e-29
Identity = 98/301 (32.56%), Postives = 147/301 (48.84%), Query Frame = 2
Query:  188 LVLFALLALAFPVSHGKVWQGSVRLSPRRP---FSYITSFTYDTGKGKVEVSIDDEYIKN-APSGTKVLAV-LDEDWSTFLS-EDDCEARERLNR-WEVTLEPGKTIFKTS---ISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIGLLVGIRK 1060
            L+L +LL L       K+  G VR+   RP   + Y++ F Y  G G   V +     KN A  G   L V LDEDW    + +D CE  +   +  E+ + P     + S   +SQ IRPH+WY VLS CN     +  +    R +  AT  QD   G+      + MLPA L  L +  FTV   +  KL +   + +   HP +W++ S + +H++  A HTLHL +Y  NG GL+ +DV  EI  I  Q++ + +L+ +A G+TL    + +      VC   +A +  +LVG  K
Sbjct:   28 LLLASLLQLWLEAGEAKLQTGQVRIKGPRPQNRWKYLSKFGYGMGTGSYTVRLQLRQPKNVATEGKATLEVYLDEDWEKVDAVQDVCERPKHARKVQEIVVPPSGEWGEWSNGTLSQWIRPHIWYFVLSDCN---DSLPNLTHNLRYEFHAT--QDG--GSEFSIEMQWMLPAHL--LFVLCFTVFVWYFSKLTVGFFRSAGSVHPVIWILTSVVVLHYLAQAFHTLHLVSYRSNGAGLKAMDVFSEIFFILSQVIQTSLLILIALGYTLLQSCIGELDLMIPVCF-MVAVIHVMLVGFGK 318          
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A7S4VID5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VID5_9DINO)

HSP 1 Score: 111 bits (277), Expect = 2.730e-23
Identity = 97/310 (31.29%), Postives = 143/310 (46.13%), Query Frame = 2
Query:  185 TLVLFALLALAFPVSHGKVWQGSVRLSPRR---PFSYITSFTYDTGKGKVEVSIDDEYIKNAPSGTKVL--AVLDEDWSTFLS-EDDCEARERLNRWE-VTLEP----GKTIFKTSISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQR---RKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIG----LLVGIRK 1060
            TL+  A L    P+   K+    VRL   R    + YI+ F Y  G G   V +     KN  +  KV     LDEDW    + ED CE      + + +T+ P    G+    T +SQ IRPH+WY V+S CN     +  +    R +     LQD   G+        MLPA L    LFV T  A F+ + + +     + +   HP +W++ S + +H++ L +HTLHL  Y  NG GL  LDV+ EI     Q+  + +L+ +A G+TL    + +      VC     F++G    +LVG  K
Sbjct:    9 TLLCLASLLSLLPLDEAKLQSAQVRLKGPRLQNRWKYISKFGYSLGTGTFGVRLQLRRPKNVATEGKVSLEVYLDEDWKRVEAIEDVCERPRHARKVQNITVPPSGEWGEWTNDT-LSQWIRPHIWYFVISDCN---DSLPNLTHSVRFEFHG--LQDG--GSEFSVEMRGMLPAHL----LFV-TGFAVFVLRFYRKTVAFSRSAGSVHPVIWILSSVVILHFLALLLHTLHLLVYRSNGVGLVALDVLSEIFFALSQVTQTSLLILIALGYTLLQSCIGELDLMIPVC-----FMVGVIHVMLVGFGK 300          
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A813IZV2_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IZV2_POLGL)

HSP 1 Score: 100 bits (248), Expect = 1.730e-19
Identity = 81/293 (27.65%), Postives = 136/293 (46.42%), Query Frame = 2
Query:  224 VSHGKVWQGSVRLS-PRRPFS--YITSFTYDTGKGKVEVSIDDEYIKN--APSGTKVLAVLDEDWSTFLSEDDCEARERLNRWEVTLEPGK-----TIFKTSISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIG----LLVGIRK 1060
            ++  K+  G VRLS PR+ +   Y++ F YD G G   V +     K   A +  ++   LDE W    +E D  AR+ L +  + +  G           S+SQS+RPH+WY  +S C++            R+K     LQ+    N  +FS E         L L  FTV   F  +  +   +++   HP +W++   +   ++    HTLHL AY  +G+G++ L+V+ EIL +  Q+  + +L+ +  G+TL    + +      +C     F++G    +LVG  K
Sbjct:   43 LAAAKLVGGPVRLSGPRQEYHWRYLSKFGYDIGTGSYSVRLQLHQPKTIAAEAPVQIEIYLDEVWPAVEAEKDVCARKALAKQVLNITVGSDGNWSAWLTGSLSQSVRPHIWYFAVSDCDKSLQNFTH-----RLKFEFHALQE----NGSEFSIEMRGMLLCNSLFLACFTVFIWFFVQRTLDFNRKTGNVHPVIWVLAIGMLTQYLAQVFHTLHLWAYKFDGDGIKPLEVLSEILFMLSQVTQTSLLILIGLGYTLLQSRIGELDLMIPMC-----FMVGVIHIMLVGFGK 321          
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A812N9B3_9DINO (Tmem145 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812N9B3_9DINO)

HSP 1 Score: 99.4 bits (246), Expect = 6.350e-19
Identity = 81/295 (27.46%), Postives = 143/295 (48.47%), Query Frame = 2
Query:  224 VSHGKVWQGSVRLS-PRRP--FSYITSFTYDTGKGKVEVSIDDEYIKNAPSGT--KVLAVLDEDWSTFLSEDD-CEARERLNRWE-VTLEPGKTIFKTS---ISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYE--DMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIG----LLVGIRK 1060
            ++ GK   G VR++ P++   + Y++ F Y+TG G           K+ P     ++   LDE W    +E + C+ ++R  +   +++ PG    + S   +SQ+IRPH+WY V+S C +  +      K         F   +   N  +FS E   ML A ++ L+ F+  V   +  K  +   K +   HP +W + S +   +V   +HT+HL AY  +G+GL+  +V+ EIL +  Q++ + +L+ +A G+TL    + +      +C     F+IG    +LVG  K
Sbjct:   34 IAGGKKIAGPVRIAGPKKENQWRYLSKFGYETGTGSFNFRFQLAAPKSIPEAAVLQLEVYLDEHWPDVEAEPNFCDRQKRAKQVRNISIGPGSNWTEWSQGTLSQNIRPHIWYFVISDCQQSLANFTHRLK---------FEFHAQQPNGSEFSVEMRGMLLANVLFLVSFI--VFLHWFAKRTLAFGKSAGYVHPVIWTLASGMITQFVAQTMHTIHLLAYKYDGDGLKACEVLSEILFMLAQVIQTSLLILIALGYTLLQSKIGELDLMIPMC-----FMIGVIHIMLVGFGK 312          
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A813FXL4_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FXL4_POLGL)

HSP 1 Score: 100 bits (248), Expect = 6.600e-19
Identity = 81/293 (27.65%), Postives = 136/293 (46.42%), Query Frame = 2
Query:  224 VSHGKVWQGSVRLS-PRRPFS--YITSFTYDTGKGKVEVSIDDEYIKN--APSGTKVLAVLDEDWSTFLSEDDCEARERLNRWEVTLEPGK-----TIFKTSISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIG----LLVGIRK 1060
            ++  K+  G VRLS PR+ +   Y++ F YD G G   V +     K   A +  ++   LDE W    +E D  AR+ L +  + +  G           S+SQS+RPH+WY  +S C++            R+K     LQ+    N  +FS E         L L  FTV   F  +  +   +++   HP +W++   +   ++    HTLHL AY  +G+G++ L+V+ EIL +  Q+  + +L+ +  G+TL    + +      +C     F++G    +LVG  K
Sbjct:  697 LAAAKLVGGPVRLSGPRQEYHWRYLSKFGYDIGTGSYSVRLQLHQPKTIAAEAPVQIEIYLDEVWPAVEAEKDVCARKALAKQVLNITVGSDGNWSAWLTGSLSQSVRPHIWYFAVSDCDKSLQNFTH-----RLKFEFHALQE----NGSEFSIEMRGMLLCNSLFLACFTVFIWFFVQRTLDFNRKTGNVHPVIWVLAIGMLTQYLAQVFHTLHLWAYKFDGDGIKPLEVLSEILFMLSQVTQTSLLILIGLGYTLLQSRIGELDLMIPMC-----FMVGVIHIMLVGFGK 975          
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A812RXC2_9DINO (Gpr180 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812RXC2_9DINO)

HSP 1 Score: 96.7 bits (239), Expect = 3.570e-18
Identity = 82/295 (27.80%), Postives = 140/295 (47.46%), Query Frame = 2
Query:  224 VSHGKVWQGSVRLS-PRRP--FSYITSFTYDTGKGKVEVSIDDEYIKNAPSGT--KVLAVLDEDWSTFLSEDD-CEARERLNRWE-VTLEPGKTIFKTS---ISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYE--DMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIG----LLVGIRK 1060
            ++ GK   G VR+S P++   + Y++ F Y+ G G           K+ P     ++   LDE W    +E + CE ++R  +   +++ PG    + S   +SQ+IRPH+WY V+S C +  +      K         F   +   N  +FS E   ML A +  L L  F V   +  K  +   K +   HP +W + + +   +V   +HT+HL AY  +G+GL+  +V+ EIL +  Q++ + +L+ +A G+TL    + +      +C     F+IG    +LVG  K
Sbjct:   34 IAAGKKIGGPVRISGPKKENQWRYLSKFGYEIGTGSFNFRFQLAAPKSIPEAAVLQLEVYLDEHWPEVEAEPNFCERQKRAKQVRNISIGPGANWTEWSQGTLSQNIRPHIWYFVISDCQQALANFTHRLK---------FEFHAQQPNGSEFSVEMRGMLLANV--LFLASFVVFLHWFTKRTLAFGKSAGYVHPVIWTLAAGMITQFVAQTMHTIHLLAYKYDGDGLKACEVLSEILFMLAQVIQTSLLILIALGYTLLQSKIGELDLMIPMC-----FMIGVIHIMLVGFGK 312          
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A812WF66_SYMPI (Gpr180 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812WF66_SYMPI)

HSP 1 Score: 93.6 bits (231), Expect = 4.680e-17
Identity = 73/270 (27.04%), Postives = 124/270 (45.93%), Query Frame = 2
Query:  284 YITSFTYDTGKGKVEVSIDDEYIKNAPSGT--KVLAVLDEDWSTFLSEDD-CEARERLNRWE-VTLEPGKTIFKTS---ISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIG----LLVGIRK 1060
            Y++ F Y+TG G           K+ P     ++   LDE W    +E + CE ++R  +   +++ PG    + S   +SQ+IRPH+WY VLS C +  +      K         F   +   N  +FS E         L L  F V   +  K  +   K +   HP +W + + +   ++   +HT+HL AY  +G+GL+  +V+ EIL +  Q++ + +L+ +A G+TL    + +      +C     F+IG    +LVG  K
Sbjct:   57 YLSKFGYETGTGSFNFRFQLAAPKSIPEPAVLQLEVYLDEHWPDVEAEPNFCERQKRAKQVRNISIGPGSNWTEWSQGTLSQNIRPHIWYFVLSDCQQSLANFTHRLK---------FEFHAQQPNGSEFSVEMRWMLLANVLFLASFIVFLHWFTKRTLAFGKSAGYVHPVIWTLAAGMITQFIAQTMHTIHLLAYKYDGDGLKACEVLSEILFMLAQVIQTSLLILIALGYTLLQSKIGELDLMIPMC-----FMIGVIHIMLVGFGK 312          
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A812JDB5_9DINO (Gpr180 protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812JDB5_9DINO)

HSP 1 Score: 93.2 bits (230), Expect = 4.750e-17
Identity = 84/309 (27.18%), Postives = 138/309 (44.66%), Query Frame = 2
Query:  203 LLALAFPVSHGKVWQGSVRLSPRRPFSYITSFTYDTGKGKVEVSIDDEYIKNAPSGTKVL---AVLDEDWSTFLSEDDCEARERLNR--WEVTLEPG---KTIFKTSISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDGAHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCA-GFIAFLIGLLVGIRKRSHFSDMIHSYSLL 1102
            L  LA+     K+    + L   + + +++ F Y  G G   + +        P G   L   + LDEDWS  LS +D   R R +R  W + +         +   +  ++R HVWY VL  C       +  F+     L      DS +    Q++    LPA ++ LL F+   +  F  +   + R      HP +  +++ + +  +  ++H LHL  Y  +G+GLRLL++V E+L +  QL+ S +L+ + YG+TL    +    PD  V A G  A L  +LV + K    +D  H Y  L
Sbjct:   11 LCLLAWIPLEAKLQVAQLHLGGVQRWGFMSKFGYAPGNGTYRLRVRVPSQTRRPDGNVTLRFESYLDEDWSEVLSIEDPCLRTRKSRKTWNLNVPSNGQWSDPWNGQVRNTVRSHVWYFVLLHCGEKLKDHSVRFEYEIRHLNEG---DSHFTIEKQWT----LPANVLSLLCFL-AFSILFARRCISEMRGVGK-LHPVIQGLVAVVGLELLAQSLHALHLLRYGYDGKGLRLLEIVAELLFVLSQLVQSTLLLLIGYGYTLLPVDIA---PDMVVLAFGIGAVLHIVLVLLIKGEDDADKFHDYESL 307          
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Match: A0A813ECU5_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813ECU5_POLGL)

HSP 1 Score: 87.4 bits (215), Expect = 5.820e-15
Identity = 85/332 (25.60%), Postives = 154/332 (46.39%), Query Frame = 2
Query:  167 MVRAIVTLVLFALLALAFPVSHGKVWQGSVRLSPRRP-----FSYITSFTYDTGKGKVEVSIDDE-----YIKNAPSGTKVLA--VLDEDWSTFLS-EDDCEARERLNRW-EVTLEPGKTIFKTS---ISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATFLQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKE---SDGA-HPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGGQLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIGLLVGI--RKRSHFSDMIHSY 1093
            M R+    VL AL  L  P + G +   S+RL   R      + +   F+Y  G  + +  +  E       K + + T VLA    DE W   LS  + C  +++     E+++ P  +  + S   +   +R HVWY  LS C       A + +  ++      LQ +  G+     ++  LPA +I L+        A    + +QR ++   S GA H  +W++   +++ ++  A+H +HL  Y+ NG+G++ L+++ E+L I GQ++ +  L+ +  G+TL SE +Q    D  +  G +  +I + V    R+    +D  HS+
Sbjct:    1 MARSKSCAVLLALACLGLPSADGMLQAFSLRLGGVRAGEEVNWEFFAKFSYGIGTSRYKYRLRLEGPLHGMFKPSQNVT-VLAEHYFDEHWPVVLSIPEKCARKDKAQGTRELSIPPDGSWTEWSGGTVEHVVRSHVWYYTLSSCQ------ASLGRVHKIGFEFEALQPN--GSHFSVEHQWTLPANIISLIFM------AVFSCILVQRCRDFARSAGAMHMVMWVLAGIVAVQFIAQALHAVHLVGYSRNGQGVKALEILSEMLTISGQMVEATFLIIIGTGYTLQSEGLQL---DWVIPVGGLIIIIHVCVIALSRQLDGAADKFHSH 314          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig856.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LKX0_ECTSI6.970e-9550.00GpcrRhopsn4 domain-containing protein n=2 Tax=Ecto... [more]
A0A7S1RV62_ALECA5.030e-2932.56Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S4VID5_9DINO2.730e-2331.29Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A813IZV2_POLGL1.730e-1927.65Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A812N9B3_9DINO6.350e-1927.46Tmem145 protein n=2 Tax=Symbiodinium TaxID=2949 Re... [more]
A0A813FXL4_POLGL6.600e-1927.65Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A812RXC2_9DINO3.570e-1827.80Gpr180 protein n=3 Tax=Symbiodinium TaxID=2949 Rep... [more]
A0A812WF66_SYMPI4.680e-1727.04Gpr180 protein n=1 Tax=Symbiodinium pilosum TaxID=... [more]
A0A812JDB5_9DINO4.750e-1727.18Gpr180 protein n=4 Tax=Symbiodinium TaxID=2949 Rep... [more]
A0A813ECU5_POLGL5.820e-1525.60Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig856contigC-tenellus_contig856:13263..16053 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LKX0
Preferred nameGPR180
PFAMsGpcrRhopsn4
Model size1231
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons5
Evalue2e-97
EggNOG OGsKOG4290@1|root,KOG4290@2759|Eukaryota
Ec32 ortholog descriptionIntimal thickness related receptor, IRP
Ec32 orthologEc-11_005870.1
Descriptionresponse to pheromone
Cds size939
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig856.3.1prot_C-tenellus_contig856.3.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig856 13429..15927 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790111.7162282-UTR-C-tenellus_contig856:13262..134281680790111.7162282-UTR-C-tenellus_contig856:13262..13428Choristocarpus tenellus KU2346UTRC-tenellus_contig856 13263..13428 +
1680790111.8047948-UTR-C-tenellus_contig856:15927..160531680790111.8047948-UTR-C-tenellus_contig856:15927..16053Choristocarpus tenellus KU2346UTRC-tenellus_contig856 15928..16053 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790111.7357695-CDS-C-tenellus_contig856:13428..135841680790111.7357695-CDS-C-tenellus_contig856:13428..13584Choristocarpus tenellus KU2346CDSC-tenellus_contig856 13429..13584 +
1680790111.750722-CDS-C-tenellus_contig856:14106..142921680790111.750722-CDS-C-tenellus_contig856:14106..14292Choristocarpus tenellus KU2346CDSC-tenellus_contig856 14107..14292 +
1680790111.765793-CDS-C-tenellus_contig856:14497..145901680790111.765793-CDS-C-tenellus_contig856:14497..14590Choristocarpus tenellus KU2346CDSC-tenellus_contig856 14498..14590 +
1680790111.7786362-CDS-C-tenellus_contig856:15139..153951680790111.7786362-CDS-C-tenellus_contig856:15139..15395Choristocarpus tenellus KU2346CDSC-tenellus_contig856 15140..15395 +
1680790111.791997-CDS-C-tenellus_contig856:15679..159271680790111.791997-CDS-C-tenellus_contig856:15679..15927Choristocarpus tenellus KU2346CDSC-tenellus_contig856 15680..15927 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig856.3.1

>prot_C-tenellus_contig856.3.1 ID=prot_C-tenellus_contig856.3.1|Name=mRNA_C-tenellus_contig856.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=313bp
MVRAIVTLVLFALLALAFPVSHGKVWQGSVRLSPRRPFSYITSFTYDTGK
GKVEVSIDDEYIKNAPSGTKVLAVLDEDWSTFLSEDDCEARERLNRWEVT
LEPGKTIFKTSISQSIRPHVWYLVLSFCNRPGSGVAKMFKKARVKLTATF
LQDSSYGNRDQFSYEDMLPARLIPLLLFVFTVAAAFIGKLFMQRRKESDG
AHPTLWMVMSALSMHWVFLAVHTLHLRAYAENGEGLRLLDVVGEILHIGG
QLLVSYVLVGLAYGWTLSSEAVQKYIPDDKVCAGFIAFLIGLLVGIRKRS
HFSDMIHSYSLL*
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mRNA from alignment at C-tenellus_contig856:13263..16053+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig856.3.1 ID=mRNA_C-tenellus_contig856.3.1|Name=mRNA_C-tenellus_contig856.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2791bp|location=Sequence derived from alignment at C-tenellus_contig856:13263..16053+ (Choristocarpus tenellus KU2346)
CATCGGTCTTGGGGCTCAACCTCACCTTCTTCCCTTGCTGACACTGCGGT CTCAAGGTTTCTGCCAACAAACTCTACAAAACGCGACACTCTTTTCCATC CAACCATCCAACCGACCGTCCATGTTAGAGGTTTGTATCTGTCCGTTCTA GAATTCATACGGAAACATGGTGAGGGCAATTGTAACTCTCGTACTTTTTG CTCTCCTTGCCCTCGCTTTCCCGGTTTCCCATGGGAAAGTGTGGCAAGGT TCCGTTCGACTGTCACCTAGGCGACCCTTTTCGTACATCACCAGCTTTAC GTACGACACAGGAAAGGGAAAGGTGATGTGCTTCTCTCTGGTTGGGTGCA CCTTCTACCAACACCAGATTAATGTGATGTCGGAAGGGTCAGAAGCTGGA ATGATTCATCCCACGTTGGTTTTCTTCCACTTTTAAGCATCTTGTCTTTC TTCTCATCGCTCCTGTGGCAAACTTGACCTGGCTACTGGAACGACTCCCC ATTGAATCAACCACATCAACGGTGCTTTTTGAGGTTCTAATTCATATTGA CGACCCGCAGTATCCTAGAGGGAGGGCTAGGCATCTATTCAGAGCCTATG TGACCATGTAGTTAAATTCATGTCATTTGAATGAACAAGTCAGATGCAAA GGCAATTTCCTTCATCTGAGCGCACGTTCCTTTTCTATACCCCTACCTAC ACCAAATTTGAAGGAAAATCACCCTCGCACTGGGCATCAAACTGGGGTAT TTTACAACAAATTATCAAGCCCCTAATGGACAAACTGGGCAATACACACA TTCCTTTAGGACACCATGCACCTGACGTAACCGCTCCTCTCCAGGTCGAG GTTTCCATAGATGATGAGTATATTAAGAACGCTCCATCTGGTACCAAGGT ACTTGCGGTACTTGACGAGGACTGGTCTACTTTTTTGTCGGAGGATGACT GTGAGGCAAGGGAAAGATTAAACCGCTGGGAAGTTACTCTGGAACCTGGA AAGACTATATTCAAGACCAGCATCTCTCAGGTATGGTGTGCAAAAGCCTC GACCAGTGCGATTGGGAAGACTCGATTTTAGCAACTAGTGATACGAAGCA AAGTTATAGTGACTGTAAGCGTCTAGGCCATCCACGACTAAACCTCAATC TTTGCATCCTAATCTTTCTGCAAAGTAACCCAAATACAAATCCCACCTAT ATTTTGGGGGGTTGCTCTTGTGTGCTCCTGGACAGTCCATACGGCCACAC GTCTGGTACCTTGTCCTCTCGTTTTGCAATAGACCTGGGAGCGGGGTTGC CAAGATGTTTAAGAAGGCCAGGGTGAAGGTGAGTTAACAGAATGGAGGGG AAGACTGGTATTGCTCTCTGTAAGATTGGAGACTCAATAGTTGGTGCTGG TCCTCTTTCCCACCTGGTTAGGCTCTGTGCTGTGCCTGTTGCCAGCATTA AACACGGGAAGGTCTTTGTTAACAAATTCACAGGAGAACTGTGATGCAAG TATCGCAATAATATCATACACAGTTTTGTATTCCTTTGTTACTAGCGGTG TCTCCCCCCTGGCAACGTCTGCATGTAAAGGTTTACGCACCATGCTTCAA AAGAGTCATATTGTACTCTTTGATTAAGATATTGAGTCACTTCTAGCAAA GAGTGAAGTATATTTCTTCTTTACGTTGGTGATCAGAAGACACTTTTTCC AAGGTTATTGTATATGCAGTAGTACAGCAGTACTGTTTAACACTTCTGCC CCATGTCTCTCTACCACTATCACGTCCTTGCCACACTATTCCTTCATCCC TTCTTCGCAATTTAGCACTCCCCTCAACTAGTGTTGAATTAAGTGATCTC TCCCCCACCTCTCCTCTTTGTTGTCAGCTCACTGCAACGTTCCTGCAGGA TTCATCCTATGGGAACAGGGATCAGTTTTCATATGAGGATATGCTTCCAG CACGCCTCATCCCTTTGCTCCTCTTTGTATTCACAGTGGCAGCAGCCTTT ATAGGCAAGCTATTCATGCAGCGTAGGAAAGAGAGTGATGGTGCCCATCC CACTCTATGGATGGTTATGAGTGCCCTGTCGATGCATTGGGTGTTCCTGG CAGTACACACACTCCATCTCAGGGCATATGCTGGTGAGTTTTGATCATAT CCTACCCCCTTGCCTTTTGTGGCATTGGGATTGAGGTCAGAAGCATAAAC ATAGGCATACACACCTTTTCCAAAGTATATTCGATATTTTAGGCTGAAGG TCATGTTGTCCAAGTGGTGAGGTTCGCTATTAGGTGTAAATGTGCTTGTC TTGAGGATATTTTCCGTCAGCACTATAGAGCGATAGAGGCGTTTTTGATG CAGTTACCAAGTTTGTTGCCTATTGCTATGATGTACCTGTGAAACGTCCT TGTGATCCGGGCTGCAGAGAATGGGGAAGGTCTCCGCCTGCTGGATGTAG TGGGTGAAATACTGCATATTGGAGGGCAGCTCCTGGTGTCTTATGTCTTG GTTGGCCTGGCATATGGGTGGACTCTCTCATCAGAGGCGGTGCAAAAGTA TATTCCTGATGACAAGGTATGTGCAGGATTTATTGCTTTTTTGATTGGGT TGTTGGTGGGAATTCGTAAAAGGTCTCATTTTAGCGATATGATACATTCA TATTCTTTGCTTTAGAAGAGGGGAATGGGAAGAGGGACAACCCAGTTGAA ATAGAAGAGAGGGATCGATTGTGACAGTGGTGTTGGAGTGTACAGGAAAT AAGATGTGGAGGGGGAGGGGAGAGAGAGTATGCATACTGAT
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Coding sequence (CDS) from alignment at C-tenellus_contig856:13263..16053+

>mRNA_C-tenellus_contig856.3.1 ID=mRNA_C-tenellus_contig856.3.1|Name=mRNA_C-tenellus_contig856.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=939bp|location=Sequence derived from alignment at C-tenellus_contig856:13263..16053+ (Choristocarpus tenellus KU2346)
ATGGTGAGGGCAATTGTAACTCTCGTACTTTTTGCTCTCCTTGCCCTCGC
TTTCCCGGTTTCCCATGGGAAAGTGTGGCAAGGTTCCGTTCGACTGTCAC
CTAGGCGACCCTTTTCGTACATCACCAGCTTTACGTACGACACAGGAAAG
GGAAAGGTCGAGGTTTCCATAGATGATGAGTATATTAAGAACGCTCCATC
TGGTACCAAGGTACTTGCGGTACTTGACGAGGACTGGTCTACTTTTTTGT
CGGAGGATGACTGTGAGGCAAGGGAAAGATTAAACCGCTGGGAAGTTACT
CTGGAACCTGGAAAGACTATATTCAAGACCAGCATCTCTCAGTCCATACG
GCCACACGTCTGGTACCTTGTCCTCTCGTTTTGCAATAGACCTGGGAGCG
GGGTTGCCAAGATGTTTAAGAAGGCCAGGGTGAAGCTCACTGCAACGTTC
CTGCAGGATTCATCCTATGGGAACAGGGATCAGTTTTCATATGAGGATAT
GCTTCCAGCACGCCTCATCCCTTTGCTCCTCTTTGTATTCACAGTGGCAG
CAGCCTTTATAGGCAAGCTATTCATGCAGCGTAGGAAAGAGAGTGATGGT
GCCCATCCCACTCTATGGATGGTTATGAGTGCCCTGTCGATGCATTGGGT
GTTCCTGGCAGTACACACACTCCATCTCAGGGCATATGCTGAGAATGGGG
AAGGTCTCCGCCTGCTGGATGTAGTGGGTGAAATACTGCATATTGGAGGG
CAGCTCCTGGTGTCTTATGTCTTGGTTGGCCTGGCATATGGGTGGACTCT
CTCATCAGAGGCGGTGCAAAAGTATATTCCTGATGACAAGGTATGTGCAG
GATTTATTGCTTTTTTGATTGGGTTGTTGGTGGGAATTCGTAAAAGGTCT
CATTTTAGCGATATGATACATTCATATTCTTTGCTTTAG
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