mRNA_C-tenellus_contig842.10.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig842.10.1 vs. uniprot
Match: D8LJT6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT6_ECTSI) HSP 1 Score: 235 bits (599), Expect = 1.360e-69 Identity = 123/133 (92.48%), Postives = 127/133 (95.49%), Query Frame = 1 Query: 475 MPAPEDKRTKRGFSKRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQSPDRQRLQEQLVSLHYKKQLICQAATSGASAKVRKSILQMRPEELDADTLARTG 873 +P EDKR KRGFSKRVTLRDLERYFEYPIEEVS+MMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQ DRQRLQEQLVSLHYKKQLICQAAT+GASAKVRKSILQMRPEELDA+TL RTG Sbjct: 90 IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTG 222
BLAST of mRNA_C-tenellus_contig842.10.1 vs. uniprot
Match: A0A6H5K0H9_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H9_9PHAE) HSP 1 Score: 234 bits (596), Expect = 3.580e-68 Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 1 Query: 475 MPAPEDKRTKRGFSKRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQSPDRQRLQEQLVSLHYKKQLICQAATSGASAKVRKSILQMRPEELDADTLARTG 873 +P EDKR KRGFSKRVTLRDLERYFEYPIE+VS+MMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQ DRQRLQEQLVSLHYKKQLICQAAT+GASAKVRKSILQMRPEELDA+TL RTG Sbjct: 92 IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEDVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTG 224
BLAST of mRNA_C-tenellus_contig842.10.1 vs. uniprot
Match: A0A836CMG7_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG7_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 5.110e-17 Identity = 48/129 (37.21%), Postives = 81/129 (62.79%), Query Frame = 1 Query: 493 KRTKRGFSKRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSI-KYVELLARTAQSPDRQRLQEQLVSLHYKKQLICQAATSGASAKVRKSILQMRPEELDADTLARTGM 876 ++ R +R+TL LE + P+ +R +GVS T++K+LCR+YGI+RWP+RQIRS+ K + K+++ A+ + D E++ L K+ ++ + A+ G +A +R +I RP ELDAD L +G+ Sbjct: 90 RQNSREVGQRITLSVLEACYGEPLTAAARRLGVSNTMLKKLCRRYGIQRWPHRQIRSIEKEVQKHMQARAQATSAVDIAACDERIALLQKKRAIVVKTASCGLNASLRSAIFMARPGELDADQLFSSGV 218
BLAST of mRNA_C-tenellus_contig842.10.1 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.370e-16 Identity = 44/114 (38.60%), Postives = 76/114 (66.67%), Query Frame = 1 Query: 523 VTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYV-ELLARTAQSPDRQRLQEQLVSLHYKKQLICQAATSGASAKVRKSILQMRPEELDADTL 861 +TL L+ ++ P+ E+++ +G+S T++K++CRKYGI+RWP+RQIRS+NKS + + E + +R LQ QL L KK+L+ + A+SG + +R ++ PE+L+ D + Sbjct: 14 ITLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQELTERINGATSHEERAELQSQLHLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEDAV 127
BLAST of mRNA_C-tenellus_contig842.10.1 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI) HSP 1 Score: 85.9 bits (211), Expect = 1.760e-15 Identity = 42/114 (36.84%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 523 VTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQSPDRQ-RLQEQLVSLHYKKQLICQAATSGASAKVRKSILQMRPEELDADTL 861 +TL L+ Y+ P+ E+++ +G+S T++K++CRK+GI+RWP+RQIRS+NK+I+ + + SPD L+ Q+ L K++L+ + A+SG +R +I PE L +++ Sbjct: 14 ITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSINKNIQDLNERINSVNSPDEHAELRNQIGLLEKKRRLVTKGASSGLHTAMRNAIFLANPEHLQEESM 127
BLAST of mRNA_C-tenellus_contig842.10.1 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.680e-14 Identity = 40/114 (35.09%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 523 VTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQSPDRQ-RLQEQLVSLHYKKQLICQAATSGASAKVRKSILQMRPEELDADTL 861 +TL L+ Y+ P+ E+++ +G+S T++K++CRK+GI+RWP+RQIRS+NK+ + ++ A+ A + + ++ QL L KK+L+ + A+SG + +R ++ PE+L+ +++ Sbjct: 11 ITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQELKERAQCALTAEEHAEIEAQLQLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEESV 124
BLAST of mRNA_C-tenellus_contig842.10.1 vs. uniprot
Match: A0A2D4BXJ0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXJ0_PYTIN) HSP 1 Score: 80.1 bits (196), Expect = 3.410e-13 Identity = 38/96 (39.58%), Postives = 66/96 (68.75%), Query Frame = 1 Query: 487 EDKRTKRGFSKRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQSPDRQRLQEQLVSLHYKKQLI 774 E R K +K +T+ +L +F+ PI +V++ G+ T++K++CR+ GIKRWP+RQIRS++KSI +E +AQ P+R + ++Q++SL K+ + Sbjct: 151 ESNRVKSLVTKHITIDELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAQGPERDKYRDQIISLKLKRDAV 246
BLAST of mRNA_C-tenellus_contig842.10.1 vs. uniprot
Match: A0A835YN08_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN08_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.390e-12 Identity = 42/108 (38.89%), Postives = 68/108 (62.96%), Query Frame = 1 Query: 517 KRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSI-KYVELLARTAQSPDRQRLQEQLVSLHYKKQLICQAATSGASAKVRKSILQMRP 837 K TL L+ F P+ +V+R VS T++KRLCRK GI+RWP+RQIRS++K + + E ++ T + + LQEQ+ L K++L+ + A+SG + +R ++ P Sbjct: 1 KEPTLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMADP 108
BLAST of mRNA_C-tenellus_contig842.10.1 vs. uniprot
Match: A0A024FU44_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FU44_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.590e-12 Identity = 36/96 (37.50%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 487 EDKRTKRGFSKRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQSPDRQRLQEQLVSLHYKKQLI 774 E R+K +K+++L +L +F+ PI EV++ G+ T++K++CR+ GIKRWP+RQIRS+ KSI +E +A +++R Q+Q+++L +++ + Sbjct: 97 ESGRSKNSLTKQISLDELRAHFDRPIIEVAKKFGICITLMKKICRRNGIKRWPHRQIRSLTKSIAALEAAMLSANETEQERYQDQIMNLRRRRESV 192
BLAST of mRNA_C-tenellus_contig842.10.1 vs. uniprot
Match: A0A1V9ZKB2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKB2_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 5.840e-12 Identity = 41/117 (35.04%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 469 QGMPAPEDKRTKRGFSKRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQSPDRQRLQEQLVSLHYKKQLICQAATSGASAKVRKS 819 +G R K +K +++ +L +F+ PI EV+R G+ T++K++CR+ GIKRWP+RQIRS+ KSI +E TA +R++ +EQ+ SL K+ + S + K+ Sbjct: 69 KGRRTAGQNRMKYHATKLISIEELREHFDQPIVEVARHFGICITLMKKVCRRNGIKRWPHRQIRSLTKSISSMEAAMMTANVSEREKYEEQIRSLVLKRDAVIADPNKEVSVSLAKT 185 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig842.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig842.10.1 >prot_C-tenellus_contig842.10.1 ID=prot_C-tenellus_contig842.10.1|Name=mRNA_C-tenellus_contig842.10.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=175bp MSISSPSLPGLTAVSSDQSITAASMAAAAAASAAGFQGMPAPEDKRTKRGback to top mRNA from alignment at C-tenellus_contig842:8840..10223+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig842.10.1 ID=mRNA_C-tenellus_contig842.10.1|Name=mRNA_C-tenellus_contig842.10.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1384bp|location=Sequence derived from alignment at C-tenellus_contig842:8840..10223+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig842:8840..10223+ >mRNA_C-tenellus_contig842.10.1 ID=mRNA_C-tenellus_contig842.10.1|Name=mRNA_C-tenellus_contig842.10.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=525bp|location=Sequence derived from alignment at C-tenellus_contig842:8840..10223+ (Choristocarpus tenellus KU2346)back to top |