mRNA_C-tenellus_contig8419.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8419.1.2 vs. uniprot
Match: A0A6H5JRJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ2_9PHAE) HSP 1 Score: 124 bits (310), Expect = 5.070e-26 Identity = 125/451 (27.72%), Postives = 166/451 (36.81%), Query Frame = 3 Query: 222 ELKACLSVSPTLDWAKLYRVTSFSFCELRGLYELFKT---------------------LGEKPMVAPCASTAFETTV----CLKNNGSMSQGIQRHQFLAACELGGLLGLSEVVGHFGSRLFTIFDTDGDGILGFKDFVCGLNHLLKGPESEKLKLTFKAYNLNG------------------------------------------KGKWVTLEDMTSVLACASEAA-YPTLLKFIQE--------------------------------------------------------------------------------------------------------QERAVWGSGSWDRHA------GGSLEKGDTVTGELNPENF----RAMSRRNAAAYAERTMKEFDQDKDGR-LSRKEFKRWARSSPVLRCRLNEFSIDINVVPFQGVRL 1025 EL C +VS + W L FSF ELR L++ F+ LG AP S E T G+ + + QFL+ CE LSEVVG FGSRLF + D +G G L F+ V GL+ LLKGPE E+LKL + AY+L+G + K++TLED+T+VLA AS+AA YP LL F + ++ A G G G S +G + +PE R M++RNA YA + EF Q + G L++KEF+RWA + PVLRCR+NEFSID+N+ PF+GVRL Sbjct: 19 ELAKCAAVSGEVRWVWLRSRALFSFAELRSLFKQFQAALRASSQQQQQQSGELQYHDLLGAASQPAPVCSV--EATKGGGGAPSCGGAPGSAMSKAQFLSLCESSDAFRLSEVVGAFGSRLFDVLDANGFGFLDFETLVLGLSKLLKGPERERLKLLYSAYDLSGVAPSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKPSRRSKYLTLEDITAVLASASQAAAYPALLSFTTDGKGGMTTGHLSGGGVIGGGXXXXTXXDGMFCCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNDRGWXXXXXXXXXXXXXXXXXXXXGLPSKEDSLRDSEEGKKEACGGRGXXXXXXXXXXXXGRSSRRGCSARVSRDPEALAELLREMAQRNAERYAAAAVSEFGQAQGGAGLTQKEFERWALTGPVLRCRINEFSIDLNLAPFRGVRL 467
BLAST of mRNA_C-tenellus_contig8419.1.2 vs. uniprot
Match: D7FRP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP0_ECTSI) HSP 1 Score: 106 bits (264), Expect = 9.980e-21 Identity = 80/237 (33.76%), Postives = 107/237 (45.15%), Query Frame = 3 Query: 222 ELKACLSVSPTLDWAKLYRVTSFSFCELRGLYELFKT---------------------LGEKPMVAP-CASTAFETTVCLKN-NGSMSQGIQRHQFLAACELGGLLGLSEVVGHFGSRLFTIFDTDGDGILGFKDFVCGLNHLLKGPESEKLKLTFKAYNLNG------------------------------------------KGKWVTLEDMTSVLACASE-AAYPTLLKFIQE 734 EL C +VS + W L + FSF ELR L++ F+ LG AP C+ A + + G+ + + QFL+ CE LSEVVG FGSRLF + D G G L F+ FV GL+ LLKGPE E+LKL + AY+L+G + K++TLED+T+VLA AS+ AAYP LL F + Sbjct: 19 ELAKCAAVSGEVRWVWLRSRSLFSFAELRSLFKQFQAALRASSQQQQEQPGELQYHDLLGAASQAAPVCSVEAIKGGGRAPSYGGAPGSAMSKAQFLSLCESSDAFRLSEVVGAFGSRLFDVLDASGVGFLDFETFVLGLSKLLKGPEKERLKLLYSAYDLSGVAPSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKVKPSRRSKYLTLEDITAVLASASQTAAYPALLSFTTD 255
BLAST of mRNA_C-tenellus_contig8419.1.2 vs. uniprot
Match: A0A6H5JF53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF53_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 1.060e-10 Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 3 Query: 816 ELNPENFRAMSRRNAAAYAERTMKEFDQDKDGR-LSRKEFKRWARSSPVLRCRLNEFSIDINVVPFQGVRL 1025 E E R M++RNA YA + EF Q + G L++KEF+RWA + PVLRCR+NEFSID+N+ PF+GVRL Sbjct: 236 EALAELLREMAQRNAERYAAAAVSEFGQAQGGAGLTQKEFERWALTGPVLRCRINEFSIDLNLAPFRGVRL 306
BLAST of mRNA_C-tenellus_contig8419.1.2 vs. uniprot
Match: A0A2B4RQA4_STYPI (Neurocalcin-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RQA4_STYPI) HSP 1 Score: 61.6 bits (148), Expect = 2.860e-6 Identity = 42/151 (27.81%), Postives = 75/151 (49.67%), Query Frame = 3 Query: 495 FGSRLFTIFDTDGDGILGFKDFVCGLNHLLKGPESEKLKLTFKAYNLNGKGKWVTLEDMTSVLACASEAAYPTLLKFIQEQERAVWGSGSWDRHAGGSLEKGDTVTGELNPENFRAMSRR-----NAAAYAERTMKEFDQDKDGRLSRKEF 932 F +F FD++GDG + F++F+C L+ +G +KLK F Y+L+G G +++ ++M ++ +A Y + EQE W G D +G L E F+ + +A+ +AE + FD+++DG + +EF Sbjct: 64 FAEHVFRTFDSNGDGTIDFREFICALSVTSRGKLEQKLKWAFSMYDLDGNG-FISRQEMLEIV----KAIYK--MTEFNEQELQEWYKGFLK----------DCPSGHLTVEEFKKIYGNFFPYGDASKFAEHVFRTFDKNEDGTIDFREF 197
BLAST of mRNA_C-tenellus_contig8419.1.2 vs. uniprot
Match: A0A6P5A3J3_BRABE (neurocalcin homolog n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5A3J3_BRABE) HSP 1 Score: 59.3 bits (142), Expect = 5.480e-6 Identity = 43/154 (27.92%), Postives = 67/154 (43.51%), Query Frame = 3 Query: 501 SRLFTIFDTDGDGILGFKDFVCGLNHLLKGPESEKLKLTFKAYNLNGKGKWVTLEDMTSVLACASEAAYPTLLKFIQEQERAVWGSGSWDRHAGGSLEKGDTVTGELNPENFRAMSRRNAAAYAERTMKEFDQDKDGRLSRKEFKRWARSSPVL 962 +++F FD DG G + F++F+CG+N L++G +E+LK F Y+L+G G ++ ++ VL E YP LE+ + +L AER +E D+D +G L KEF R P L Sbjct: 81 TQIFRTFDRDGSGTIDFREFMCGMNVLMRGSITERLKWAFYMYDLDGSGS-ISTNELLDVLKLMYEIRYPEY-----------------------GLEELEKTEPQLQ-------------MLAERIFQELDEDGNGVLQMKEFVEGIRMKPYL 197
BLAST of mRNA_C-tenellus_contig8419.1.2 vs. uniprot
Match: A0A7D9DMB0_PARCT (NADPH oxidase 5 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DMB0_PARCT) HSP 1 Score: 59.3 bits (142), Expect = 8.120e-6 Identity = 30/81 (37.04%), Postives = 50/81 (61.73%), Query Frame = 3 Query: 495 FGSRLFTIFDTDGDGILGFKDFVCGLNHLLKGPESEKLKLTFKAYNLNGKGKWVTLEDMTSVLACASEAAYPTLLKFIQEQ 737 F R FT+FD +GDG++G K+ V GL L G ++KL F+ Y+++G G +++ ++M +VL E + LKF ++Q Sbjct: 113 FAERFFTLFDDNGDGMIGMKELVAGLELLTNGTVADKLTFLFRVYDIDGNG-YLSEDEMRTVLTSCMEESK---LKFDEQQ 189
BLAST of mRNA_C-tenellus_contig8419.1.2 vs. uniprot
Match: A0A2F0AUJ2_ESCRO (Hippocalcin-like protein 4 (Fragment) n=2 Tax=Laurasiatheria TaxID=314145 RepID=A0A2F0AUJ2_ESCRO) HSP 1 Score: 57.4 bits (137), Expect = 2.690e-5 Identity = 40/156 (25.64%), Postives = 69/156 (44.23%), Query Frame = 3 Query: 495 FGSRLFTIFDTDGDGILGFKDFVCGLNHLLKGPESEKLKLTFKAYNLNGKGKWVTLEDMTSVLACASEAAYPTLLKFIQEQERAVWGSGSWDRHAGGSLEKGDTVTGELNPENFRAMSRRNAAAYAERTMKEFDQDKDGRLSRKEFKRWARSSPVL 962 F +F FDT+GDG + F++F+C L+ +G +KL F+ Y+L+G G+ LE +L+ I+ + V G + +N + R ++ K+ DQDKD +++ +EFK A+S P + Sbjct: 90 FAEHVFRTFDTNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLE----------------MLEIIEAIYKMV----------------GTVIMMRMNQDGLTPQQR------VDKIFKKMDQDKDDQITLEEFKEAAKSDPSI 207
BLAST of mRNA_C-tenellus_contig8419.1.2 vs. uniprot
Match: UPI000975298D (neurocalcin-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI000975298D) HSP 1 Score: 56.6 bits (135), Expect = 2.830e-5 Identity = 25/85 (29.41%), Postives = 51/85 (60.00%), Query Frame = 3 Query: 495 FGSRLFTIFDTDGDGILGFKDFVCGLNHLLKGPESEKLKLTFKAYNLNGKGKWVTLEDMTSVLACASEAAYPTLLKFIQEQERAV 749 F +F +FD + DG+L F++F+CG + +L G EKLK +F Y+++G G +++ +M+++L+ ++ + L +E+ Sbjct: 64 FARHVFRVFDQNKDGLLDFREFMCGFSVVLLGSLEEKLKFSFNIYDIDGNG-FISRNEMSAILSALNKGNFSCGLSQDDPEEKTA 147
BLAST of mRNA_C-tenellus_contig8419.1.2 vs. uniprot
Match: A0A1S8VXX1_9FUNG (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VXX1_9FUNG) HSP 1 Score: 59.3 bits (142), Expect = 5.320e-5 Identity = 41/130 (31.54%), Postives = 62/130 (47.69%), Query Frame = 3 Query: 258 DWAKLYRVTSFSFCELRGLYELFKTLGEKPMVAPCASTAFETTVCLKNNGSMSQGIQRHQFLAACELGGLLGLSEVVGHFGSRLFTIFDTDGDGILGFKDFVCGLNHLLKGPESEKLKLTFKAYNLNGKG 647 D+++L+R T F EL LYE +++L TV S G+ + + G LG + + R+F FD D DGI+ FK+ VCGL+ L KG E++ F+ Y+L+G G Sbjct: 487 DFSQLHRETHFDEIELEALYEQYRSLS---------------TV-----DSAEGGVVKDTYFKCL---GPLGFEKNL--IAERIFAFFDQDRDGIINFKELVCGLSILCKGNLDERIHYAFQGYDLDGDG 591
BLAST of mRNA_C-tenellus_contig8419.1.2 vs. uniprot
Match: A0A177B895_9BILA (Calcineurin regulatory subunit n=1 Tax=Intoshia linei TaxID=1819745 RepID=A0A177B895_9BILA) HSP 1 Score: 55.1 bits (131), Expect = 7.800e-5 Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 3 Query: 501 SRLFTIFDTDGDGILGFKDFVCGLNHL-LKGPESEKLKLTFKAYNLNGKGKWVTLEDMTSVL 683 +R+ +IFDTDGDG + FK+FV G++ + G E EKLK F+ Y+LN G ++T ++ VL Sbjct: 57 NRVISIFDTDGDGEIDFKEFVQGVSKFGINGGEKEKLKFAFRIYDLNNDG-YITNNELFKVL 117 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8419.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8419.1.2 >prot_C-tenellus_contig8419.1.2 ID=prot_C-tenellus_contig8419.1.2|Name=mRNA_C-tenellus_contig8419.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=334bp MDHLSCVCKVLTTKVSCISEYLSDSYYAPARVKTSIERKRRMTQSNRSLYback to top mRNA from alignment at C-tenellus_contig8419:8..3900- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8419.1.2 ID=mRNA_C-tenellus_contig8419.1.2|Name=mRNA_C-tenellus_contig8419.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3893bp|location=Sequence derived from alignment at C-tenellus_contig8419:8..3900- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8419:8..3900- >mRNA_C-tenellus_contig8419.1.2 ID=mRNA_C-tenellus_contig8419.1.2|Name=mRNA_C-tenellus_contig8419.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1002bp|location=Sequence derived from alignment at C-tenellus_contig8419:8..3900- (Choristocarpus tenellus KU2346)back to top |