mRNA_C-tenellus_contig8417.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8417.1.1 vs. uniprot
Match: D7G7N2_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N2_ECTSI) HSP 1 Score: 224 bits (570), Expect = 2.340e-66 Identity = 132/296 (44.59%), Postives = 167/296 (56.42%), Query Frame = 1 Query: 1 LRVRFMGGGG-WVCVTPSPVLLAEECQAAIDEAEAMAAASISQGK----------GGWGTARHYSVPTTDVAVKDLPQTIAWFNRIMRKVVQPLVVTASLMGEGDY-------------------------------FSVAEKEVGVE---------------GQEIQQVK--DEGRGREEEVKVGQGKTSGLAPL--------IRVHDAFIVRYDAEAQQSLPTHTDQSEISLTITLNASTEYDGGGTWFEGLGCAVRPEEAGHVVIFPGGEVMHGGEAITRGVRYVIAVFMYEH 687 L V FM G G WVC T P+L A EC A ++EAE A+ GGWGT+RHY+VPTTDVAV++LP+T+AWFNR MR + P V A+ +G G + S A+ + E GQE +QV+ D+ E + +G+ P +RVHDAF+VRYDA AQ+SLP HTDQ E+SLTI+LN + EY+GGGTWFEGLG AVRPEEAGHVV+FPGG +HGG +TRGVRY++AVF+YEH Sbjct: 256 LDVDFMTGHGEWVCSTRLPLLSASECSAIVNEAEEKASXXXXXXXXXXXXXXXXXGGWGTSRHYAVPTTDVAVRELPRTLAWFNRAMRTRIGPTVAVAAALGGGVFERPGRRSGSLKRSPPVAEPHAQDEDFPARAVCSAADSDEAAESAEALRASASVEPENGQERRQVESDDDQXXXXXEAEEPRGRPGAPTPXXPALMLRRLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNGTGEYEGGGTWFEGLGSAVRPEEAGHVVVFPGGRTVHGGREVTRGVRYILAVFLYEH 551
BLAST of mRNA_C-tenellus_contig8417.1.1 vs. uniprot
Match: A0A6H5L5S3_9PHAE (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5S3_9PHAE) HSP 1 Score: 229 bits (583), Expect = 1.140e-65 Identity = 133/299 (44.48%), Postives = 172/299 (57.53%), Query Frame = 1 Query: 1 LRVRFMGGGG-WVCVTPSPVLLAEECQAAIDEAEAMAAASISQGK-----------GGWGTARHYSVPTTDVAVKDLPQTIAWFNRIMRKVVQPLVVTASLMGEGDY-------------------------------------------FSVAEKEVGVEGQEIQQVKD-EGRGREEEVKVGQGKTSG------LAPLIRVHDAFIVRYDAEAQQSLPTHTDQSEISLTITLNASTEYDGGGTWFEGLGCAVRPEEAGHVVIFPGGEVMHGGEAITRGVRYVIAVFMYEHRVEEEDED 711 L V FM G G WVC T P++ A EC A I+EAE A GWGT+RHY+VPTTDVAV++LP+T+AWFNR MR + P V A+ +G G + ++ E G +G++++ D EG+ RE E G+ + +RVHDAF+VRYDA AQ+SLP HTDQ E+SLTI+LN + EY+GGGTWFEGLG AVRPEEAGHVV+FPGG +HGG+ +TRGVRY++AVF+YEH EEE+E+ Sbjct: 698 LDVDFMAGDGEWVCSTRLPLISASECSAIINEAEEKAXXXXXXXXXXXXXXXXXXXSGWGTSRHYAVPTTDVAVRELPRTLAWFNRAMRTRIGPTVAVAAALGGGIFERPGRRSGSLELSPPVAKPHAKDEDFPAHAVCSAADSDEAAAAIALIAPEDGQKGRQVESDDDQEGQSREAEEPRGRAGAPXXXXXALMLRRLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNGTGEYEGGGTWFEGLGRAVRPEEAGHVVVFPGGRTVHGGKEVTRGVRYILAVFLYEHWEEEEEEE 996
BLAST of mRNA_C-tenellus_contig8417.1.1 vs. uniprot
Match: A0A7S4BI62_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BI62_CHRCT) HSP 1 Score: 147 bits (372), Expect = 8.410e-39 Identity = 93/216 (43.06%), Postives = 118/216 (54.63%), Query Frame = 1 Query: 34 VCVTPSPVLLAEECQAAIDEAEAMAAASISQGKGGWGTARHYSVPTTDVAVKDLPQTIAWFNRIMRKVVQPLVVTASLMGEGDYFSVAEKEVGVEGQEIQQVKDEGRGREEEVKVGQGKTSGLAPLIRVHDAFIVRYDAEAQQSLPTHTDQSEISLTITLNASTEYDGGGTWFEGLGCAVRPEEAGHVVIFPGGEVMHGGEAITRGVRYVIAVFMY 681 VC T +PVL +C +AI AE A Q +GGW TARHY+VPTTD+ V P +AWF +MR V P F + EVG A +RVHDAFIV+Y A AQ LP H D+S++S+T+ LN S+EYDGGGT+F L AVRPE+ G ++ F G ++HGGE I RGVRYV+A F+Y Sbjct: 166 VCST-APVLSQAQCASAIAMAEEFA-----QTEGGWTTARHYAVPTTDLPVHKCPCLLAWFKELMRSAVAP-------------FLSSNFEVG------------------------------ADAVRVHDAFIVKYHAAAQARLPMHFDESQLSITLPLNESSEYDGGGTYFYALRRAVRPEQ-GQLLAFSGA-LLHGGEPIVRGVRYVLAAFLY 330
BLAST of mRNA_C-tenellus_contig8417.1.1 vs. uniprot
Match: A0A7S4F157_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F157_CHRCT) HSP 1 Score: 147 bits (372), Expect = 2.450e-38 Identity = 93/216 (43.06%), Postives = 118/216 (54.63%), Query Frame = 1 Query: 34 VCVTPSPVLLAEECQAAIDEAEAMAAASISQGKGGWGTARHYSVPTTDVAVKDLPQTIAWFNRIMRKVVQPLVVTASLMGEGDYFSVAEKEVGVEGQEIQQVKDEGRGREEEVKVGQGKTSGLAPLIRVHDAFIVRYDAEAQQSLPTHTDQSEISLTITLNASTEYDGGGTWFEGLGCAVRPEEAGHVVIFPGGEVMHGGEAITRGVRYVIAVFMY 681 VC T +PVL +C +AI AE A Q +GGW TARHY+VPTTD+ V P +AWF +MR V P F + EVG A +RVHDAFIV+Y A AQ LP H D+S++S+T+ LN S+EYDGGGT+F L AVRPE+ G ++ F G ++HGGE I RGVRYV+A F+Y Sbjct: 224 VCST-APVLSQAQCASAIAMAEEFA-----QTEGGWTTARHYAVPTTDLPVHKCPCLLAWFKELMRSAVAP-------------FLSSNFEVG------------------------------ADAVRVHDAFIVKYHAAAQARLPMHFDESQLSITLPLNESSEYDGGGTYFYALRRAVRPEQ-GQLLAFSGA-LLHGGEPIVRGVRYVLAAFLY 388
BLAST of mRNA_C-tenellus_contig8417.1.1 vs. uniprot
Match: R1G8J0_EMIHU (Fe2OG dioxygenase domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1G8J0_EMIHU) HSP 1 Score: 144 bits (362), Expect = 1.390e-35 Identity = 90/215 (41.86%), Postives = 111/215 (51.63%), Query Frame = 1 Query: 34 VCVTPSPVLLAEECQAAIDEAEAMAAASISQGKGGWGTARHYSVPTTDVAVKDLPQTIAWFNRIMRKVVQPLVVTASLMGEGDYFSVAEKEVGVEGQEIQQVKDEGRGREEEVKVGQGKTSGLAPLIRVHDAFIVRYDAEAQQSLPTHTDQSEISLTITLNASTEYDGGGTWFEGLGCAVRPEEAGHVVIFPGGEVMHGGEAITRGVRYVIAVFM 678 V V+ P+L C+ I AEA AA S GGW TARH+SV TTD+ + L + + FN +R ++ P + + + LA +RV D F+VRYDA Q SLPTHTDQS +S TI LN EYDGGGTWF GLG AV AGH V+FPG +V HGG ITRGVRY+I +FM Sbjct: 798 VFVSQRPLLPKPTCERYIAAAEAWAARS-----GGWTTARHHSVATTDIPLTSLDELLPSFNEALRTLLLPALSACY----------------------------------------PEAAPLASSLRVLDCFLVRYDATKQASLPTHTDQSLLSFTIALNDPGEYDGGGTWFRGLGRAVDAPAAGHAVLFPG-KVEHGGHPITRGVRYIIVLFM 966
BLAST of mRNA_C-tenellus_contig8417.1.1 vs. uniprot
Match: A0A7S2HJP0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HJP0_9STRA) HSP 1 Score: 131 bits (329), Expect = 3.340e-34 Identity = 87/237 (36.71%), Postives = 120/237 (50.63%), Query Frame = 1 Query: 34 VCVTPSPVLLAEECQAAIDEAEAMAAASISQGKGGWGTARHYSVPTTDVAVKDLPQTIAWFNRIMRKVVQPLVVTASLMGEGDYFSVAEKEVGVEGQEIQQVKDEGRGREEEVKVGQGKTSGLAPLIRVHDAFIVRYDAEAQQSLPTHTDQSEISLTITLNAST---------------------EYDGGGTWFEGLGCAVRPEEAGHVVIFPGGEVMHGGEAITRGVRYVIAVFMY 681 V V+ PV+ EC+ + +AA + +Q GGW T+RHYSVPTTD+ V+ LP+ + WF RK + P++ T + V + +GV +DAFIV+Y AEAQ+ LP HTDQS +SLTI LN S ++GGGT+FE +G + P AG +V FPG E+ HGG+ IT+GVRY+IAVF+Y Sbjct: 21 VFVSKGPVISESECRDVV-----VAANAYTQSAGGWATSRHYSVPTTDIPVRALPRVLDWFRSCCRKRLFPMLETL--------YGVPPRRLGV-----------------------------------NDAFIVKYTAEAQRHLPLHTDQSALSLTIALNGSGGDDHHPSHEGGDADGPEDAVGSFEGGGTYFEQIGRPLCPC-AGGLVAFPG-ELSHGGQPITKGVRYIIAVFLY 207
BLAST of mRNA_C-tenellus_contig8417.1.1 vs. uniprot
Match: A0A7S2ST73_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST73_9STRA) HSP 1 Score: 134 bits (336), Expect = 4.540e-34 Identity = 88/231 (38.10%), Postives = 118/231 (51.08%), Query Frame = 1 Query: 22 GGGWVCVTPSPVLLAEECQAAIDEAEAMAAASISQGKGGWGTARHYSVPTTDVAVKDLPQTIAWFNRIMRKVVQPLVVTASLMGEGDYFSVAEKEVGVEGQEIQQVKDEGRGREEEVKVGQGKTSGLAPLIRVHDAFIVRYDAEAQQSLPTHTDQSEISLTITLNASTEYDGGGTWFEGLGCAVRPEE-----------AGHVVIFPGGEVMHGGEAITRGVRYVIAVFMY 681 GG V V +P++ EEC AI AE AA++ GGW TARH S PTTD+A+KD+P + WFN + V+ P++ AS E A IRVHDAFIV+Y++ Q SL TH D+S S TI LN S EY+GGGT+FE + + E+ AG +V F GG++ HGG+AI+ G RY+I +F+Y Sbjct: 119 GGSLVHVCKTPIIPKEECAWAIQAAEDHAAST-----GGWTTARHASAPTTDMAIKDVPVLLEWFNEKLETVLFPML--ASRFPE--------------------------------------LIPSADCIRVHDAFIVKYESTGQASLATHQDESSFSFTIALNDSDEYEGGGTYFESIRKSDAAEDQPYSPMALNADAGGIVCF-GGKIRHGGQAISSGRRYIIPLFVY 303
BLAST of mRNA_C-tenellus_contig8417.1.1 vs. uniprot
Match: F0Y9Z7_AURAN (Fe2OG dioxygenase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9Z7_AURAN) HSP 1 Score: 138 bits (348), Expect = 1.030e-33 Identity = 90/225 (40.00%), Postives = 120/225 (53.33%), Query Frame = 1 Query: 31 WVCVTPSPVLLAEECQAAIDEAEAMAAASISQGKGGWGTARHYSVPTTDVAVKDLPQTIAWFNRIMRKVVQPLVVTASLMGEGDYFSVAEKEVGVEGQEIQQVKDEGRGREEEVKVGQGKTSGLAPL-IRVHDAFIVRYDAEAQQSLPTHTDQSEISLTITLNASTEYDGGGTWFEGLGCAVRPEEAGHVVIFPGGEVMHGGEAITRGVRYVIAVFMYEHRVEEE 702 +V PV+ A C AI AEA A S G GGW TARH++VPTTDV V+++P + WFN +R + P + G GL P +RV DAF+V+Y A AQ+SLP H+DQS+IS+T+ LN+S +YDGGGT+F L AV +AG +V FPG + H G AITRG R+V+ F+YE+R +E Sbjct: 724 YVYAFDEPVVPAASCADAIAIAEAHA----SHG-GGWTTARHFAVPTTDVPVREVPALLKWFNDALRSSIFPAL--------------------------------------------GALYGLDPARLRVIDAFLVKYSAAAQRSLPLHSDQSQISITLPLNSSADYDGGGTYFHDLRQAVN-RDAGGLVAFPG-FLPHAGHAITRGTRFVVVAFLYEYREADE 897
BLAST of mRNA_C-tenellus_contig8417.1.1 vs. uniprot
Match: A0A830H9E2_9CHLO (Uncharacterized protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H9E2_9CHLO) HSP 1 Score: 128 bits (321), Expect = 3.280e-30 Identity = 87/223 (39.01%), Postives = 117/223 (52.47%), Query Frame = 1 Query: 34 VCVTPSPVLLAEECQAAIDEAEAMAAASISQGKGGWGTARHYSVPTTDVAVKDLPQTIAWFNRIMRKVVQPLVVTASLMGEGDYFSVAEKEVGVEGQEIQQVKDEGRGREEEVKVGQGKTSGLAPLIRVHDAFIVRYDAEAQQSLPTHTDQSEISLTITLNASTEYDGGGTWFEGL-------GCAVRPEEAGHVVIFPGGEVMHGGEAITRGVRYVIAVFMY 681 V T P L +EEC ID AEA AA QG G W TARHYSVPTTD+ + +P+ ++ FN M++ + +++ E+ ++ G+T + VHDAF+VRYD E + +LP HTD+SE+SLTI LN + GGGT+F G VRP+ GHVV F GG H GE ++RGVRY+IA F+Y Sbjct: 527 VFCTIRPALTSEECTRIIDLAEARAA----QGNG-WTTARHYSVPTTDLPLDSIPEALSIFNAAMKRSINAMLL-----------------------------------EQFPQLVNGRTR-----VAVHDAFVVRYD-EHRNALPEHTDESEVSLTIALNDAAV--GGGTYFPSTASTVPFDGTVVRPD-VGHVVSFAGGTTRHAGEPVSRGVRYIIAAFLY 700
BLAST of mRNA_C-tenellus_contig8417.1.1 vs. uniprot
Match: A0A813I8M0_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I8M0_POLGL) HSP 1 Score: 114 bits (284), Expect = 3.470e-26 Identity = 76/215 (35.35%), Postives = 106/215 (49.30%), Query Frame = 1 Query: 58 LLAEECQAAIDEAEAMAAASISQGKGGWGTARHYSVPTTDVAVKDLPQTIAWFNRIMRKVVQP-LVVTASLMGEGDYFSVAEKEVGVEGQEIQQVKDEGRGREEEVKVGQGKTSGLAPLIRVHDAFIVRYDAE--AQQSLPTHTDQSEISLTITLN----ASTEYDGGGTWFEGLGCAVRPEEAGHVVIFPGGEVMHGGEAITRGVRYVIAVFMY 681 L AEEC+ + EA A++ +GGWGT RH SV TTDVAV+D+PQ W +M + P L + + +G ++G +G+ + R+HDAF+VRYDAE SLP H+D S +S +I LN + GGGTWF+ LG V AG V F G + H G I RG R+++ +F+Y Sbjct: 124 LTAEECRGVVGLCEAHASS-----RGGWGTVRHSSVKTTDVAVEDIPQLRPWLRTLMATRLAPFLAMCYPRLADGS-------DLGPQGERV----------------------------RIHDAFVVRYDAEKDGSLSLPAHSDISTLSFSIALNDGDGEGDAFGGGGTWFKALGGRVINAAAGKAVAFAG-PLRHAGHPIERGTRFILVLFLY 297 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8417.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8417.1.1 >prot_C-tenellus_contig8417.1.1 ID=prot_C-tenellus_contig8417.1.1|Name=mRNA_C-tenellus_contig8417.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=235bp MGGGGWVCVTPSPVLLAEECQAAIDEAEAMAAASISQGKGGWGTARHYSVback to top mRNA from alignment at C-tenellus_contig8417:4..723+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8417.1.1 ID=mRNA_C-tenellus_contig8417.1.1|Name=mRNA_C-tenellus_contig8417.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=720bp|location=Sequence derived from alignment at C-tenellus_contig8417:4..723+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8417:4..723+ >mRNA_C-tenellus_contig8417.1.1 ID=mRNA_C-tenellus_contig8417.1.1|Name=mRNA_C-tenellus_contig8417.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=705bp|location=Sequence derived from alignment at C-tenellus_contig8417:4..723+ (Choristocarpus tenellus KU2346)back to top |