mRNA_C-tenellus_contig8414.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8414.4.1 vs. uniprot
Match: A0A6H5JXI4_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXI4_9PHAE) HSP 1 Score: 389 bits (999), Expect = 1.010e-132 Identity = 181/266 (68.05%), Postives = 218/266 (81.95%), Query Frame = 1 Query: 1 MPPRSENAIVSADPPSPSSIPRDVKE-KLNLSALRSRIPKECFEKSLPKSLFYMVRDMGIILALQWAFPHYVAGNWPLTFVWWNATGFMMWALFVVGHDCGHTTFSVYPWVNGMCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSFPWFGKDQYEEDCYPITKIWLRSPFHPFTSYFLSYLLGGMYDGSHFNPFGNLCWSRQEQVQTSVSAVSVIGFA-ISVGFFFEWDWTMIVVRYIVPLGIMNYWLVMVTYLQHHEPDTK 792 MPPRS+ AI A+ S SSI R K+ +++L ALR ++P+ECF KSLP+SLFYM RDMG +LALQ+ +P YVAG+WPLTF+WWNA GFM+WALFV+GHDCGHTTFS YPWVN + GHLCHAPLLVPFWPWAKSHNEHH NHVEKDMS+PWFGK Q+E++ P TK++L++PFHPFTSY +YLL G YDGSHFNPF L WSR+EQVQ +VS SV+ F + V F++DW+ IVVR++VP+ IMNYWLVMVTYLQHHE DTK Sbjct: 1 MPPRSDTAI-GANDDSTSSITRPNKDVRVDLMALRKQVPEECFIKSLPRSLFYMARDMGCVLALQYLYPIYVAGSWPLTFLWWNANGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKQQFEQEVKPFTKLFLKTPFHPFTSYLFTYLLAGWYDGSHFNPFSVLFWSRKEQVQCAVSTASVLTFIYLLVSVLFDFDWSAIVVRHLVPVMIMNYWLVMVTYLQHHEEDTK 265
BLAST of mRNA_C-tenellus_contig8414.4.1 vs. uniprot
Match: A0A835YPJ0_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ0_9STRA) HSP 1 Score: 334 bits (857), Expect = 2.370e-111 Identity = 160/265 (60.38%), Postives = 193/265 (72.83%), Query Frame = 1 Query: 1 MPPRSENAIVSADPPSP-SSIPRDVKEKLNLSALRSRIPKECFEKSLPKSLFYMVRDMGIILALQWAFPHYVAGNWPLTFVWWNATGFMMWALFVVGHDCGHTTFSVYPWVNGMCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSFPWFGKDQYEEDCYPITKIWLRSPFHPFTSYFLSYLLGGMYDGSHFNPFGNLCWSRQEQVQTSVSAVSVIGF-AISVGFFFEWDWTMIVVRYIVPLGIMNYWLVMVTYLQHHEPDT 789 M PR E+ + ADPP P VK+KL + L+ IP ECF KSL KSLFYMVRDMG+I AL A+P YV GNWPLTFVWWNA GFMMWALFVVGHDCGHTTFS Y WVN +CGHLCHAPLLVPFWPWA+SH++HH NHVEKD SFPWF K+QY + + L++P HP SY +SYL G +DGSHFNPFG+L +R ++VQ +VS+++V F + + + E+ W+ V+Y P I NYWLVMVTYLQHHEPD+ Sbjct: 1 MAPRDESFLQQADPPGVLKRDPMAVKDKLRMDVLKRIIPDECFHKSLVKSLFYMVRDMGLICALWKAYPVYVEGNWPLTFVWWNAMGFMMWALFVVGHDCGHTTFSEYTWVNAVCGHLCHAPLLVPFWPWAQSHHQHHSYHNHVEKDHSFPWFRKEQYATQLSGVGRTILKTPLHPLFSYGVSYLFFGYWDGSHFNPFGSLFKNRTQRVQCAVSSLAVALFLGLFLHYVIEYSWSAFAVKYAAPWCIYNYWLVMVTYLQHHEPDS 265
BLAST of mRNA_C-tenellus_contig8414.4.1 vs. uniprot
Match: A0A7S4PZI0_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4PZI0_9DINO) HSP 1 Score: 236 bits (601), Expect = 1.540e-72 Identity = 109/235 (46.38%), Postives = 149/235 (63.40%), Query Frame = 1 Query: 85 NLSALRSRIPKECFEKSLPKSLFYMVRDMGIILALQWAFPHYVAGNWPLTFVWWNATGFMMWALFVVGHDCGHTTFSVYPWVNGMCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSFPWFGKDQYEEDCYPITKIWLRSPFHPFTSYFLSYLLGGMYDGSHFNPFGNLCWSRQEQVQTSVSAVSVIGFAISVGFFFEWDWTMIVVRYIVPLGIMNYWLVMVTYLQHHEPDT 789 ++ LR+ IP CF KSLP+SLFYM RD I + + ++ A W F++WN GF MW LFVVGHDCGHT+FS Y W+N +CGH+CHAPL+VP+WPW +SH+ HH NH +KD S PW + + + I + P F Y YLL G+ DGSHF+PF L + Q++VQ +VS++SV+ F++ + F+F+ W Y PL N WLV+VTYLQHH+ +T Sbjct: 46 SMKELRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKALGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQ-LNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQCAVSSLSVVAFSVGMYFYFD-SWGQWFSMYFGPLCFFNMWLVLVTYLQHHDDET 278
BLAST of mRNA_C-tenellus_contig8414.4.1 vs. uniprot
Match: A0A1S7C7R3_9STRA (Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7R3_9STRA) HSP 1 Score: 227 bits (578), Expect = 8.410e-69 Identity = 112/240 (46.67%), Postives = 147/240 (61.25%), Query Frame = 1 Query: 88 LSALRSRIPKECFEKSLPKSLFYMVRDMGIILALQWAFPHYVAG-NWPLTFVWWNATGFMMWALFVVGHDCGHTTFSVYPWVNGMCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSFPWFGKDQYEEDCYPITKIWLRSPFHPFTSYFLSYLLGGMYDGSHFNPFGNLCWSRQEQVQTSVSAVSVI--GFAISVGFFF--EWDWTMIVVRYIVPLGIMNYWLVMVTYLQHHEPDTK 792 LS ++ IP++CF+KSL +S +YM+RD + AL + +P A P FVWWN GF MW LFV+GHDCGH +FS Y W+N +CGH+CHAPL+VP+WPW KSH HH NH+ KDMS PW K+ +E D P + L +P F Y YL G DGSH PF L +E+VQ +VS + ++ G + +G E I Y+VPL + N W+ MVTYLQHH+ DTK Sbjct: 9 LSQIKKAIPEKCFQKSLLRSFYYMLRDFAALAALYFVYPTVQAKYGLPGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWLNDICGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTKEVFE-DLTPFEQALLENPLSLFIKYTFLYLFAGKMDGSHVVPFSPLFTDTKERVQCAVSTLGMVVAGALVYIGLEGGKEGGMARIGSIYVVPLLVFNAWITMVTYLQHHDEDTK 247
BLAST of mRNA_C-tenellus_contig8414.4.1 vs. uniprot
Match: A0A6V1NJB0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NJB0_HETAK) HSP 1 Score: 222 bits (566), Expect = 1.540e-67 Identity = 106/235 (45.11%), Postives = 143/235 (60.85%), Query Frame = 1 Query: 85 NLSALRSRIPKECFEKSLPKSLFYMVRDMGIILALQWAFPHYVAGNWPLTFVWWNATGFMMWALFVVGHDCGHTTFSVYPWVNGMCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSFPWFGKDQYEEDCYPITKIWLRSPFHPFTSYFLSYLLGGMYDGSHFNPFGNLCWSRQEQVQTSVSAVSVIGFAISVGFFFEWDWTMIVVRYIVPLGIMNYWLVMVTYLQHHEPDT 789 +L LR+ IP CF KSLP+SLFYM RD+ I + + + A W F++WN TGF MW LFVVGHDCGHT+FS Y W+N +CGH+C+APLLVP+WPW +SH+ HH NH EKD PW K+Q I + P + F Y YLL G+ DGSH +PF L + Q+++Q +VS++SV F++ + F+F+ W+ + Y PL N WL + L H E T Sbjct: 26 SLKELRAAIPSHCFVKSLPRSLFYMFRDLVAICLCVYFYDTFKALGWSGLFIYWNLTGFSMWCLFVVGHDCGHTSFSNYGWLNDLCGHICNAPLLVPYWPWKRSHHLHHSYHNHTEKDKGRPWI-KEQEWAQLNAIQTAAMECPLYAFFGYTWIYLLAGIRDGSHLSPFSKLFETMQQRIQCAVSSLSVAAFSVGMYFYFD-SWSQWFLMYFGPLCFFNMWLALTDCLSHREDQT 258
BLAST of mRNA_C-tenellus_contig8414.4.1 vs. uniprot
Match: I2CR09_NANGC (Glycerolipid omega-3 fatty acid desaturase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR09_NANGC) HSP 1 Score: 221 bits (562), Expect = 6.960e-66 Identity = 112/241 (46.47%), Postives = 147/241 (61.00%), Query Frame = 1 Query: 88 LSALRSRIPKECFEKSLPKSLFYMVRDMGIILALQWAFPHYVAGNWPLT--FVWWNATGFMMWALFVVGHDCGHTTFSVYPWVNGMCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSFPWFGKDQYEEDCYPITKIWLRSPFHPFTSYFLSYLLGGMYDGSHFNPFGNLCWSRQEQVQTSVSAVSVI--GFAISVGFF--FEWDWTMIVVRYIVPLGIMNYWLVMVTYLQHHEPDTK 792 LS L+ IP++CF+KSL +S++YM+RD + AL +P V N+ L FVWWN GF MW LFV+GHDCGH +FS Y W N +CGH+CHAPL+VP+WPW KSH HH NH+ KDMS PW ++ +E D P + L +P F Y YL G DGSH P L +E++Q +VS + ++ G I VG E I Y++PL + N W+ MVTYLQHH+ DTK Sbjct: 59 LSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPS-VQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFE-DLTPFEQALLENPLSLFIKYTFLYLFAGKLDGSHVLPTSPLFSDTKERIQCAVSTLCMLVAGVLIYVGLEGGAEGGLARIGSMYLIPLLVFNAWITMVTYLQHHDEDTK 297
BLAST of mRNA_C-tenellus_contig8414.4.1 vs. uniprot
Match: A0A811KVY1_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KVY1_9BILA) HSP 1 Score: 194 bits (492), Expect = 2.960e-56 Identity = 96/249 (38.55%), Postives = 143/249 (57.43%), Query Frame = 1 Query: 43 PSPSSIPRDVKEKLNLSALRSRIPKECFEKSLPKSLFYMVRDMGIILALQWAFPHYVA-GNWPLTFVWWNATGFMMWALFVVGHDCGHTTFSVYPWVNGMCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSFPWFGKDQYEEDCYPITKIWLRSPFHPFTSYFLSYLLGGMYDGSHFNPFGNLCWSRQEQVQTSVSAVSVIGFAISVGFFFEWDWTMIVVRYIVPLGIMNYWLVMVTYLQHHEPD 786 P P ++P L LR IP ECFEK KS+F++V D +I L +A P+ G WP VW+ G ++LFVVGHDCGH TFS Y W+N + GH+ HAP+L P+WPW KSH +HH +H+EKD PW+ +++Y ++ + I + + + P F + YL G+ DGSH+ P+ L + +++V+ +VS I A ++ ++ V Y+ P+ WLVMVTYLQH + + Sbjct: 28 PQPPNLP-------TLEELRKAIPPECFEKDWRKSMFFLVWDYAVIAGLYYALPYIEQYGGWPGLLVWYYVVGMFGFSLFVVGHDCGHGTFSEYTWLNDIIGHVAHAPILAPYWPWQKSHRQHHQYTSHLEKDKGHPWYTQEEYVQEPWVIQQFF-KFPLSAFVRWNFVYLTLGLPDGSHYWPYSKLFKTTEDRVKCAVSTSLCIASAYVAFVICDYSFSTYVKYYLAPVLFQGLWLVMVTYLQHQDEE 268
BLAST of mRNA_C-tenellus_contig8414.4.1 vs. uniprot
Match: A0A7R9YMG6_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YMG6_DIALT) HSP 1 Score: 187 bits (476), Expect = 4.000e-54 Identity = 98/239 (41.00%), Postives = 137/239 (57.32%), Query Frame = 1 Query: 82 LNLSALRSRIPKECFEKSLPKSLFYMVRDMGIILALQWAFPHYVAGNWPLTFV-WWNATGFMMWALFVVGHDCGHTTFSVYPWVNGMCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSFPWFGKDQYEEDCYPITKIWLRSPFHPFTSYFLSYLLGGMYDGSHFNPFGNLCW--SRQEQVQTSVSAVSVIGFAISVGFFFEWDWTMIVVRYIVPLGIMNYWLVMVTYLQHHEPDT 789 + L +R IP+ECF K +SL+++ RD+ ++ +PH A PL ++ +WN GF MWALFVVGHDCGHTTFS +N +CGH+ HAPLLVP++PWA SH HH NH +KD S PWF K + T+ +L+SP PF +Y + YL G +DGSH P L S + +++ +VS +V+ F + W + + Y +WL MVTY QHH+ T Sbjct: 24 MTLQDIRKVIPQECFVKDTGRSLWFLARDLAVLATAPLVYPHVAASANPLLYLAYWNFYGFFMWALFVVGHDCGHTTFSNSKLLNDVCGHIAHAPLLVPYYPWAMSHRRHHMYHNHQKKDASHPWFTKASMPK-LPAFTRSFLKSPLAPFLAYPI-YLFEGSFDGSHVFPLSKLYRGASTRAKLECAVSTATVLAFGAAAKLACG-SWATLALAYGGCYACFTFWLFMVTYFQHHDHGT 259
BLAST of mRNA_C-tenellus_contig8414.4.1 vs. uniprot
Match: A0A507FMY8_9FUNG (FA_desaturase domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FMY8_9FUNG) HSP 1 Score: 188 bits (477), Expect = 5.210e-54 Identity = 103/240 (42.92%), Postives = 135/240 (56.25%), Query Frame = 1 Query: 73 KEKLNLSALRSRIPKECFEKSLPKSLFYMVRDMGIILALQWAFPHYVAGNWPLTFVWWNATGFMMWALFVVGHDCGHTTFSVYPWVNGMCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSFPWFGKDQYEEDCYPITKIWLRSPFHPFTSYFLSYLLGGMYDGSHFNPFGN-LCWSRQEQVQTSVSAVSVIGFAISVGFFFEWDWTMIVVRYIVPLGIMNYWLVMVTYLQHHEPDT 789 K+KL + ALR +P FEK++ S++Y+ D+ +I A + + +WP+ ++ N G MW LFVVGHDCGH TFS +N + GHL H +LVPFWPWAKSH+ HH + KD S W Y+ + I KI PF YF YLL G DGSHFNPF + L + ++ VQ +VS+ +GF S F W W V Y+VP I N+WL VTYLQHH T Sbjct: 28 KDKLTVGALRKALPPHIFEKNVAHSMWYLATDLTVIFACLRLYSDDI--SWPMYVIYANVLGLFMWCLFVVGHDCGHNTFSDSKALNAVMGHLSHGFILVPFWPWAKSHSTHHAYHQNKTKDKSHGW-----YDREDEGIEKIMKDQPFFIPFLYFFVYLLAGFPDGSHFNPFSSRLFHTTKDMVQCAVSSFVCVGFFAS--FVAYWGWERFVWIYVVPWLIFNFWLYKVTYLQHHGDGT 258
BLAST of mRNA_C-tenellus_contig8414.4.1 vs. uniprot
Match: A0A507E9I1_9FUNG (FA_desaturase domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E9I1_9FUNG) HSP 1 Score: 186 bits (471), Expect = 3.970e-53 Identity = 105/273 (38.46%), Postives = 146/273 (53.48%), Query Frame = 1 Query: 1 MPPRSENAIVSADPPSPSSIPRDVK---EKLNLSALRSRIPKECFEKSLPKSLFYMVRDMGIILALQWAFPHYVAG------NWPLTFVWWNATGFMMWALFVVGHDCGHTTFSVYPWVNGMCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSFPWFGKDQYEEDCYPITKIWLRSPFHPFTSYFLSYLLGGMYDGSHFNPFGNLCWSRQEQVQTSVSAVSVIGFAISVGFFFEWDWTMIVVRYIVPLGIMNYWLVMVTYLQHHEPDTK 792 +PP A VSA +++ R+ +N+ ALR +P FEKSL S+ Y V D ++ L + + Y+ G W VW N GF MW+ FVVGHDCGH +FS +N + GHL H LLVP+WPWA+SH +HH NH +KDMS W + + L PF +Y YLL G DGSHF P+G L + +E+VQ +S V+ + +++ + W+ V ++VP I N WL +VTYLQHH DT+ Sbjct: 8 LPPGGPKAPVSA-----ATVAREANLPGSDVNIGALRKSLPAHVFEKSLAHSMAYFVWDSAVLAGLFYGYKAYLHGVSWGATEWAAYVVWANVVGFFMWSFFVVGHDCGHGSFSDNKTINAVVGHLSHGFLLVPYWPWARSHAQHHAYHNHKDKDMSHVWSTPAEESTGAKFLKDQPLLVPF----AYTFGYLLAGWTDGSHFVPWGKLFRNNRERVQCVISTGVVLAYLVAIRYA-AGSWSAFSVGFVVPWSIYNTWLYVVTYLQHHTADTQ 270 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8414.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8414.4.1 >prot_C-tenellus_contig8414.4.1 ID=prot_C-tenellus_contig8414.4.1|Name=mRNA_C-tenellus_contig8414.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=264bp MPPRSENAIVSADPPSPSSIPRDVKEKLNLSALRSRIPKECFEKSLPKSLback to top mRNA from alignment at C-tenellus_contig8414:3976..6262+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8414.4.1 ID=mRNA_C-tenellus_contig8414.4.1|Name=mRNA_C-tenellus_contig8414.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2287bp|location=Sequence derived from alignment at C-tenellus_contig8414:3976..6262+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8414:3976..6262+ >mRNA_C-tenellus_contig8414.4.1 ID=mRNA_C-tenellus_contig8414.4.1|Name=mRNA_C-tenellus_contig8414.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=792bp|location=Sequence derived from alignment at C-tenellus_contig8414:3976..6262+ (Choristocarpus tenellus KU2346)back to top |