mRNA_C-tenellus_contig8407.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8407.5.1 vs. uniprot
Match: D7FXJ9_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ9_ECTSI) HSP 1 Score: 198 bits (503), Expect = 1.430e-59 Identity = 108/220 (49.09%), Postives = 137/220 (62.27%), Query Frame = 1 Query: 1 GEDFVGTNRTEAGLECTLGRLAFNIFEPIDLPILITSIGNKVGTEEIHTSATESSTASPSGERRGDAPSAGSLASAGTHTYSICTNFVTRDEKALRGRLILEGSCEEHPKRSDRLNVRFLSGYIEPDDGQDLDAWCAVIGQRDGASKK------RLKARAVELMLKLVFGYRPPRGGLGEHGEMSYTMTRPPKGSLDILYLDEELRVTRGQRGSVIIVER 642 GEDF GT RT+ G+ECTLGRL FNIFEP++LP+LI +I N +G + A P+ E Y I T +V RD LRGR+ + G+C E P +R+ VRF G IEPD+GQDLDAW VIG RD K LK +A LMLK+VFG++ P GLG GE+SY M R PKG LDI+YLDEE+RVTRGQ+G++++V+R Sbjct: 107 GEDFKGTTRTKDGVECTLGRLVFNIFEPVNLPVLIVAIKNTIGDRPEN--------ADPAYESN----------------YVISTRWVARDGSGLRGRVEISGTCWEDPSMPERVLVRFTKGSIEPDEGQDLDAWRKVIGVRDVEGTKDKGPLSTLKEKAARLMLKVVFGFQGPADGLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDR 302
BLAST of mRNA_C-tenellus_contig8407.5.1 vs. uniprot
Match: A0A835ZKX0_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKX0_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.220e-40 Identity = 94/219 (42.92%), Postives = 120/219 (54.79%), Query Frame = 1 Query: 1 GEDFVGTNRTEAGLECTLGRLAFNIFEPIDLPILITSIGNKVGTEEIHTSATESSTASPSGERRGDAPSAGSLASAGTHTYSICTNFVTRDEKA---LRGRLILEGSCEEHPKRSDRLNVRFLSGYIEPDDGQDLDAWCAVIGQRDGASKKR--LKARAVELMLKLVFGYRPPRGGLGEHGEMSYTMTRPPKGSLDILYLDEELRVTRGQRGSVIIVER 642 G +F R G ECTLGRLAFN+FEP LP+ IT I N + E++ ER+GD P G TY + +FV R ++ LRG + + G C K ++RL V F +G + P GQDL W AV R+G K R L + LMLKL G++PP G YTM RPP+G LDILYLD+ LRVTRG RGS+++VER Sbjct: 112 GFNFPDGKRGPLGWECTLGRLAFNLFEPTKLPVSITHIVNTL--EDVPA------------ERQGDRP--------GELTYDLVNSFVARSPESGVELRGEVAVSGVCWPDSKDANRLRVAFGAGELRPAQGQDLAEWEAVFKPREGKEKPRVPLGKKLTNLMLKLFMGFQPPADA--GQGVQRYTMNRPPEGYLDILYLDDALRVTRGNRGSIVVVER 306
BLAST of mRNA_C-tenellus_contig8407.5.1 vs. uniprot
Match: A0A6H2NGX9_9CYAN (Fimbrial protein n=1 Tax=Leptolyngbya sp. LCM1.Bin17 TaxID=2480211 RepID=A0A6H2NGX9_9CYAN) HSP 1 Score: 120 bits (301), Expect = 7.020e-30 Identity = 73/199 (36.68%), Postives = 103/199 (51.76%), Query Frame = 1 Query: 49 TLGRLAFNIFEPIDLPILITSIGNKVGTEEIHTSATESSTASPSGERRGDAPSAGSLASAGTHTYSICTNFVTRD-EKALRGRLILEGSCEEHPKRSDRLNVRFLSGYIEPDDGQDLDAWCAVIGQRDGASKKRLKARAVELMLKLVFGYRPPRGGLGEHGEMSYTMTRPPKGSLDILYLDEELRVTRGQRGSVIIVER 642 TLGRLAFN+F+P D+ ++I + V +A HT+ I +F T D E L+GR+ G CE P + +L V+F G +EP D D W V G D A + L AR L+LKL+FG PP + G + + M R PKG+L +LYLDE+LR+TRG++G+V+I +R Sbjct: 86 TLGRLAFNMFQPQDMKLVINQVSQPVWP----------------------------IADGPQHTHDIVVDFTTLDLEVPLQGRVRNLGICE--PATASQLQVQFTGGVLEPAADSDRDHWHQVFGDPDAAPRLGLTARLQGLVLKLMFGLVPPTPMAPDTGRIEFQMRRSPKGTLTVLYLDEDLRITRGEKGTVLICDR 254
BLAST of mRNA_C-tenellus_contig8407.5.1 vs. uniprot
Match: UPI00146A6814 (fimbrial protein n=1 Tax=Nodosilinea sp. P-1105 TaxID=2546229 RepID=UPI00146A6814) HSP 1 Score: 120 bits (301), Expect = 7.020e-30 Identity = 70/199 (35.18%), Postives = 105/199 (52.76%), Query Frame = 1 Query: 49 TLGRLAFNIFEPIDLPILITSIGNKVGTEEIHTSATESSTASPSGERRGDAPSAGSLASAGTHTYSICTNFVTRD-EKALRGRLILEGSCEEHPKRSDRLNVRFLSGYIEPDDGQDLDAWCAVIGQRDGASKKRLKARAVELMLKLVFGYRPPRGGLGEHGEMSYTMTRPPKGSLDILYLDEELRVTRGQRGSVIIVER 642 TLGRLAFN+F+P L ++I + V +A HT+ I +F T D E L+GR+ G C+ P +++L V+F G +EP D D W V G D + + LKAR L+LKL+FG PP+ + G + + M R PKG L+ILYLD++LR+TRG++G++++ +R Sbjct: 86 TLGRLAFNMFQPQTLKLVIDQVSQPVWP----------------------------IADGAHHTHDIVVDFTTLDLEVPLQGRVRNLGICQ--PATANQLQVQFTGGVLEPAVDSDRDHWHQVFGDPDASPRPGLKARLQGLVLKLMFGLVPPKAMAADTGRIEFQMRRSPKGRLEILYLDDDLRITRGEKGTILVCDR 254
BLAST of mRNA_C-tenellus_contig8407.5.1 vs. uniprot
Match: A0A846BZ97_9CYAN (Fimbrial protein n=4 Tax=unclassified Okeania TaxID=2634635 RepID=A0A846BZ97_9CYAN) HSP 1 Score: 118 bits (296), Expect = 3.680e-29 Identity = 75/200 (37.50%), Postives = 107/200 (53.50%), Query Frame = 1 Query: 49 TLGRLAFNIFEPIDLPILITSIGNKVGTEEIHTSATESSTASPSGERRGDAPSAGSLASAGTHTYSICTNFVTRDE--KALRGRLILEGSCEEHPKRSDRLNVRFLSGYIEPDDGQDLDAWCAVIGQRDGASKKRLKARAVELMLKLVFGYRPPRGGLGEHGEMSYTMTRPPKGSLDILYLDEELRVTRGQRGSVIIVER 642 TLGRLAFN+FEP +L ++I S+ V GE+R ++ I F DE L+G + G C +P + L V F G + P G+DL W + GQ +SKK LK + + + LKL+FG PP+G E GE+S+TM R PKG L++LYLDEE R+T+G++G+V++ ER Sbjct: 79 TLGRLAFNMFEPTNLKLVIDSVRQPV-------------VLLGEGEKR---------------SHDIVVEFSIIDELFPPLKGIVRNLGVC--YPADNQNLQVEFTGGTLGPQKGEDLSTWKDIFGQNK-SSKKGLKEQLMSVFLKLMFGLVPPQGMNTETGEISFTMKRSPKGRLEVLYLDEEFRITKGEKGTVLVCER 247
BLAST of mRNA_C-tenellus_contig8407.5.1 vs. uniprot
Match: A0A846FND7_9CYAN (Fimbrial protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FND7_9CYAN) HSP 1 Score: 117 bits (293), Expect = 9.330e-29 Identity = 72/200 (36.00%), Postives = 107/200 (53.50%), Query Frame = 1 Query: 49 TLGRLAFNIFEPIDLPILITSIGNKVGTEEIHTSATESSTASPSGERRGDAPSAGSLASAGTHTYSICTNFVTRDEK--ALRGRLILEGSCEEHPKRSDRLNVRFLSGYIEPDDGQDLDAWCAVIGQRDGASKKRLKARAVELMLKLVFGYRPPRGGLGEHGEMSYTMTRPPKGSLDILYLDEELRVTRGQRGSVIIVER 642 TLGRLAFN+F+P L ++I + V + +G++R T+ I T F T +E L+G + G CE P D L V+F G + P D +L+AW A+ G + +KK LK + L ++FG PP+G + G++S+ M R PKG L +LYLDEELR+T+G+RG+V++ ER Sbjct: 80 TLGRLAFNMFQPTHLQVVIDRVLQPV-------------VPTGNGQQR---------------THDIITEFTTVNENIPTLQGIVYNFGVCE--PADDDALQVQFTGGALAPKDTHNLEAWKAIFGDQSKPAKKSLKEKLSSAFLGIMFGLVPPQGMEPDTGQISFKMRRSPKGKLKLLYLDEELRITQGERGTVLVCER 249
BLAST of mRNA_C-tenellus_contig8407.5.1 vs. uniprot
Match: UPI001785C01E (fimbrial protein n=1 Tax=Microcoleus sp. FACHB-SPT15 TaxID=2692830 RepID=UPI001785C01E) HSP 1 Score: 117 bits (292), Expect = 1.370e-28 Identity = 74/211 (35.07%), Postives = 109/211 (51.66%), Query Frame = 1 Query: 16 GTNRTEAGLECTLGRLAFNIFEPIDLPILITSIGNKVGTEEIHTSATESSTASPSGERRGDAPSAGSLASAGTHTYSICTNFVTRDEKA--LRGRLILEGSCEEHPKRSDRLNVRFLSGYIEPDDGQDLDAWCAVIGQRDGASKKRLKARAVELMLKLVFGYRPPRGGLGEHGEMSYTMTRPPKGSLDILYLDEELRVTRGQRGSVIIVER 642 G R++ TLGRLAFN+F+P L I+I + V P GE + T+ I F T DE L+G + +G C H + L V+F G + P +++AW AV G++ S LK R + +L+++FG PP+G G +S+ M R PKG+L++LYLDEELR+TRG+RG+V++ ER Sbjct: 69 GELRSDGKYVYTLGRLAFNLFQPTSLKIVIDRVLQPVV---------------PVGEGQ-------------QRTHDIIVEFTTVDENTPTLQGIVHNQGICSPHDDNT--LQVQFTGGELAPKAPNEIEAWKAVFGEQSKPSTTGLKERLMTSVLRMMFGIVPPQGMDRNTGRVSFKMRRSPKGNLELLYLDEELRITRGERGTVLVCER 249
BLAST of mRNA_C-tenellus_contig8407.5.1 vs. uniprot
Match: A0A1Z4N4X8_9CYAN (PAP_fibrillin domain-containing protein n=5 Tax=Nostocales TaxID=1161 RepID=A0A1Z4N4X8_9CYAN) HSP 1 Score: 114 bits (284), Expect = 2.000e-27 Identity = 71/215 (33.02%), Postives = 108/215 (50.23%), Query Frame = 1 Query: 7 DFVGTNRTEAGLEC-TLGRLAFNIFEPIDLPILITSIGNKVGTEEIHTSATESSTASPSGERRGDAPSAGSLASAGTHTYSICTNFVTRDEKA--LRGRLILEGSCEEHPKRSDRLNVRFLSGYIEPDDGQDLDAWCAVIGQRDGASKKRLKARAVELMLKLVFGYRPPRGGLGEHGEMSYTMTRPPKGSLDILYLDEELRVTRGQRGSVIIVER 642 +F G + G C TLGRLAFN+F+P L + + + V L + H++ I F T DE L G + +G C+ + L V F G ++P D Q+L+ W AV G + ++++ K + L L+FG PP+G + GE+S+TM R PKG L+ILY+DEELR+TRG+R ++++ ER Sbjct: 65 NFPGGEQLADGSFCYTLGRLAFNMFQPTGLKVTLQRVSQPVFL----------------------------LGNGEQHSHDIVVEFTTIDESVPKLSGIVRNQGVCQVVSDTT--LQVEFTGGILQPQDNQNLEEWKAVFGNQQPSARRSFKDILMSGFLNLMFGLVPPQGMDADTGEISFTMRRSPKGRLEILYVDEELRITRGEREAILVSER 249
BLAST of mRNA_C-tenellus_contig8407.5.1 vs. uniprot
Match: K9QSZ7_NOSS7 (PAP_fibrillin n=2 Tax=Nostocaceae TaxID=1162 RepID=K9QSZ7_NOSS7) HSP 1 Score: 114 bits (284), Expect = 2.000e-27 Identity = 72/200 (36.00%), Postives = 106/200 (53.00%), Query Frame = 1 Query: 49 TLGRLAFNIFEPIDLPILITSIGNKVGTEEIHTSATESSTASPSGERRGDAPSAGSLASAGTHTYSICTNFVTRDEK--ALRGRLILEGSCEEHPKRSDRLNVRFLSGYIEPDDGQDLDAWCAVIGQRDGASKKRLKARAVELMLKLVFGYRPPRGGLGEHGEMSYTMTRPPKGSLDILYLDEELRVTRGQRGSVIIVER 642 +LGRLAFN+F+P L ++I + V +GE+R T+ I F T DE L G + G C+ R L V+F G + P D +D W AV GQ+ +K+ +K + ++L+L+FG PP+G GE+++TM R PKG L+ILYLDEELR+TRG++G+V++ ER Sbjct: 80 SLGRLAFNMFQPTGLKLVIDRVLQPVFPVG-------------NGEQR---------------THDIVVEFTTIDESFPQLSGIVRNLGVCQPISDRV--LQVKFTGGVLAPQDPNSIDDWRAVFGQQSKPTKQTIKENLMSVVLRLMFGLVPPQGINPTTGEVAFTMERSPKGRLEILYLDEELRITRGEKGTVLVCER 249
BLAST of mRNA_C-tenellus_contig8407.5.1 vs. uniprot
Match: UPI00082A7F03 (fimbrial protein n=2 Tax=unclassified Anabaena TaxID=2619674 RepID=UPI00082A7F03) HSP 1 Score: 114 bits (284), Expect = 2.000e-27 Identity = 72/200 (36.00%), Postives = 103/200 (51.50%), Query Frame = 1 Query: 49 TLGRLAFNIFEPIDLPILITSIGNKVGTEEIHTSATESSTASPSGERRGDAPSAGSLASAGTHTYSICTNFVTRDEKA--LRGRLILEGSCEEHPKRSDRLNVRFLSGYIEPDDGQDLDAWCAVIGQRDGASKKRLKARAVELMLKLVFGYRPPRGGLGEHGEMSYTMTRPPKGSLDILYLDEELRVTRGQRGSVIIVER 642 TLGRLAFN+FEP L ++I + V +GE+R T+ I F T DE + L G + G C+ P L V+F G + P + +DAW V GQ+ ++ K + + L+L+FG PP+G GE+++TM R PKG L ILYLDEELR+TRG++G+V++ ER Sbjct: 80 TLGRLAFNMFEPTKLKLVIDRVLQPVLPVG-------------NGEQR---------------THDIVVEFTTIDESSAPLSGVVRNLGVCQ--PASDTVLQVKFTGGVLAPQNLNQIDAWRGVFGQQSQPKQRTFKEHLMSVFLRLMFGLVPPQGMNNTTGEVAFTMERSPKGRLSILYLDEELRITRGEKGTVLVCER 249 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8407.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8407.5.1 >prot_C-tenellus_contig8407.5.1 ID=prot_C-tenellus_contig8407.5.1|Name=mRNA_C-tenellus_contig8407.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=216bp GEDFVGTNRTEAGLECTLGRLAFNIFEPIDLPILITSIGNKVGTEEIHTSback to top mRNA from alignment at C-tenellus_contig8407:2583..3230+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8407.5.1 ID=mRNA_C-tenellus_contig8407.5.1|Name=mRNA_C-tenellus_contig8407.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=648bp|location=Sequence derived from alignment at C-tenellus_contig8407:2583..3230+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8407:2583..3230+ >mRNA_C-tenellus_contig8407.5.1 ID=mRNA_C-tenellus_contig8407.5.1|Name=mRNA_C-tenellus_contig8407.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=648bp|location=Sequence derived from alignment at C-tenellus_contig8407:2583..3230+ (Choristocarpus tenellus KU2346)back to top |