mRNA_C-tenellus_contig8393.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8393.1.1 vs. uniprot
Match: D7FRF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF6_ECTSI) HSP 1 Score: 159 bits (401), Expect = 3.470e-47 Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = 1 Query: 22 QASLDRTVKVWDVRSLGRGKGKRSESSAKPKVLAEMPHHRSVNSAHFSPGGGEWMVTVGQDDKLRLYRDVAQQANGVKISPEHVMPHNNQTGRWLTKFQAAWDPKSTGLFSIGSMQREPHAV 387 +ASLDR+V++WD R++G G G S + +AE+PH RSVNSAHFSP G EWM TV QDDK+RLY+D+ A+G ++S V+PHNNQTGRWLTKFQA+WDPKS GLF+IGSMQ+ PH + Sbjct: 8 RASLDRSVRLWDARNVGAGTG--SSGIGGMQHVAELPHFRSVNSAHFSPTG-EWMATVCQDDKIRLYQDLGS-ASGKQVSASQVLPHNNQTGRWLTKFQASWDPKSKGLFAIGSMQKYPHGI 125
BLAST of mRNA_C-tenellus_contig8393.1.1 vs. uniprot
Match: A0A836C879_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C879_9STRA) HSP 1 Score: 120 bits (300), Expect = 5.550e-32 Identity = 64/122 (52.46%), Postives = 80/122 (65.57%), Query Frame = 1 Query: 25 ASLDRTVKVWDVRSLGRGKGKRSESSAKPKVLAEMPHHRSVNSAHFSPGGGEWMVTVGQDDKLRLYRDVA-QQANGVKISPEHVMPHNNQTGRWLTKFQAAWDPKSTGLFSIGSMQREPHAV 387 ASLD TV +WD R++G+ S+ KP LA +PH RSVNSAHF+P G ++VT QDD+L LY +A A G I+ HNNQTGRWLTKFQA WDPK++ LF GSM + PH + Sbjct: 1 ASLDTTVCLWDARNMGKHHSAPKVSARKP--LATLPHARSVNSAHFAPAGA-YLVTTCQDDRLHLYDTLAFAAALGESIA------HNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGI 113
BLAST of mRNA_C-tenellus_contig8393.1.1 vs. uniprot
Match: W2QSC9_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QSC9_PHYPN) HSP 1 Score: 110 bits (274), Expect = 1.490e-25 Identity = 57/122 (46.72%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 25 ASLDRTVKVWDVRSLGRGKGKRSESSAKPKVLAEMPHHRSVNSAHFSPGGGEWMVTVGQDDKLRLY--RDVAQQANGVKIS---PEHV-MPHNNQTGRWLTKFQAAWDPKSTGLFSIGSMQR 372 ASLDRTV +WD R + SS K L +PHHRS+N A+FSP G+W+VTVGQD + ++ + ++ VK + P+ V +PHNN TGRWLTK AAWDPK F IG M++ Sbjct: 399 ASLDRTVCLWDARKM---------SSKKNTPLVTLPHHRSINCAYFSPRNGDWLVTVGQDSYIDMFDTSSLTERKPSVKSAIALPKSVRVPHNNMTGRWLTKLHAAWDPKRPNQFVIGCMEQ 511
BLAST of mRNA_C-tenellus_contig8393.1.1 vs. uniprot
Match: A0A5D6XZ84_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZ84_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.840e-24 Identity = 57/117 (48.72%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 25 ASLDRTVKVWDVRSLGRGKGKRSESSAKPKVLAEMPHHRSVNSAHFSPGGGEWMVTVGQDDKLRLYRDV-AQQANGVKISPEHVMPHNNQTGRWLTKFQAAWDPKSTGLFSIGSMQR 372 ASLDRTV +WD R L + K L MPH RSVN A+FSP G E +VTVGQDD + ++ AQ + ++P +PHNN TGRWLTK AAWDPK F +G MQ+ Sbjct: 405 ASLDRTVCLWDARQLRKSKNA---------PLVTMPHRRSVNCAYFSPDG-EHLVTVGQDDYVNVFATGDAQHYDAHSVAPTLAIPHNNATGRWLTKLHAAWDPKRKDQFVLGCMQQ 511
BLAST of mRNA_C-tenellus_contig8393.1.1 vs. uniprot
Match: A0A3M6VCT6_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCT6_9STRA) HSP 1 Score: 105 bits (261), Expect = 9.080e-24 Identity = 55/123 (44.72%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 25 ASLDRTVKVWDVRSLGRGKGKRSESSAKPKVLAEMPHHRSVNSAHFSPGGGEWMVTVGQDDKLRLYRDVAQQA-------NGVKISPEHVMPHNNQTGRWLTKFQAAWDPKSTGLFSIGSMQR 372 ASLDRTV +WD R + SS K L +PH+RSVN A+FSP G W+VTVGQD + ++ D + A + + + +PHNN TGRWLTK AAWDPK F IG M++ Sbjct: 397 ASLDRTVCLWDARKM---------SSTKNTPLVTLPHYRSVNCAYFSPRDGAWLVTVGQDSYIDMF-DTSSLAERKTSDRSAITLPNSIRVPHNNMTGRWLTKLHAAWDPKRPNQFVIGCMEQ 509
BLAST of mRNA_C-tenellus_contig8393.1.1 vs. uniprot
Match: A0A2D4C066_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C066_PYTIN) HSP 1 Score: 104 bits (260), Expect = 1.220e-23 Identity = 59/118 (50.00%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 25 ASLDRTVKVWDVRSLGRGKGKRSESSAKPKVLAEMPHHRSVNSAHFSPGGGEWMVTVGQDDKLRLYR--DVAQQANGVKISPEHVMPHNNQTGRWLTKFQAAWDPKSTGLFSIGSMQR 372 ASLDRTV +WDVR L S +K L MPH RSVN A+FSP G E +VTV QDD R++ D+A+ + +P +PHNNQTGRWLTK AAWDPK + +G MQ+ Sbjct: 412 ASLDRTVSLWDVRKL---------SKSKNTPLVTMPHTRSVNCAYFSPSG-EHLVTVCQDDYNRVFETADLAK----LPTTPALRIPHNNQTGRWLTKLHAAWDPKRPTQYVVGCMQQ 515
BLAST of mRNA_C-tenellus_contig8393.1.1 vs. uniprot
Match: K3W540_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W540_GLOUD) HSP 1 Score: 104 bits (259), Expect = 1.330e-23 Identity = 58/117 (49.57%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 25 ASLDRTVKVWDVRSLGRGKGKRSESSAKPKVLAEMPHHRSVNSAHFSPGGGEWMVTVGQDDKLRLYRDV-AQQANGVKISPEHVMPHNNQTGRWLTKFQAAWDPKSTGLFSIGSMQR 372 ASLDRTV +WD R L S+S+ KP L MPH RSVN A+FSP G + +VTVG D+ + L+ A+ + ++P +PHNNQTGRWLTK A WDPK F IG MQ+ Sbjct: 341 ASLDRTVCLWDSRKL-------SKSNNKP--LVTMPHERSVNCAYFSPTG-DHLVTVGLDNYVNLFNTGDAKHHDAHSVAPTLAIPHNNQTGRWLTKLHATWDPKHKDRFVIGCMQQ 447
BLAST of mRNA_C-tenellus_contig8393.1.1 vs. uniprot
Match: A0A067CEG2_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CEG2_SAPPC) HSP 1 Score: 95.1 bits (235), Expect = 2.160e-20 Identity = 56/118 (47.46%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 25 ASLDRTVKVWDVRSLGRGKGKRSESSAKPKVLAEMPHHRSVNSAHFSPGGGEWMVTVGQDDKLRLYRDVAQQANGVKISPEHVMPHNNQTGRWLTKFQAAWDPK--STGLFSIGSMQR 372 ASLDRTV +WD R L +PHHRS+N A+FSP G E +VTVGQDD + LY A P HNNQTGRWLTKF A WDPK +T F +GS Q+ Sbjct: 294 ASLDRTVCLWDARQPST-------------PLNMLPHHRSINCAYFSPNG-EALVTVGQDDHVHLYSMPAS-----SDEPTTRFVHNNQTGRWLTKFHAHWDPKCLATPRFVLGSNQQ 392
BLAST of mRNA_C-tenellus_contig8393.1.1 vs. uniprot
Match: A0A8K1CSD2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSD2_PYTOL) HSP 1 Score: 95.1 bits (235), Expect = 2.980e-20 Identity = 55/118 (46.61%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 25 ASLDRTVKVWDVRSLGRGKGKRSESSAKPKVLAEMPHHRSVNSAHFSPGGGEWMVTVGQDDKLRLY--RDVAQQANGVKISPEHVMPHNNQTGRWLTKFQAAWDPKSTGLFSIGSMQR 372 ASLDRTV +WD R L K L MPH RSVN A+FSP G +VTVGQD+ +Y RD + + + P + HNNQTGRWLTK AAWDPK + IG M++ Sbjct: 377 ASLDRTVCLWDSRQL-----------KKATPLLTMPHSRSVNCAYFSPNGHH-LVTVGQDNYNHVYDTRDASHHSTQ-DVKPTLRISHNNQTGRWLTKLHAAWDPKRPDHYVIGCMEQ 481
BLAST of mRNA_C-tenellus_contig8393.1.1 vs. uniprot
Match: A0A1V9YZQ7_9STRA (WD repeat-containing protein 76-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZQ7_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.040e-19 Identity = 53/110 (48.18%), Postives = 62/110 (56.36%), Query Frame = 1 Query: 10 STSLQASLDRTVKVWDVRSLGRGKGKRSESSAKPKV-LAEMPHHRSVNSAHFSPGGGEWMVTVGQDDKLRLYRDVAQQANGVKISPEHVMPHNNQTGRWLTKFQAAWDPK 336 +T ASLDRTV +WD R KP +A +PHHRS+N A+FSP G E +VTVGQDD + +Y A P HNNQTGRWLTKF A WDPK Sbjct: 280 NTFATASLDRTVCIWDAR--------------KPATAIATLPHHRSINCAYFSPNG-EALVTVGQDDFVHVYEMPATDR------PTTRFAHNNQTGRWLTKFHAHWDPK 368 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8393.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8393.1.1 >prot_C-tenellus_contig8393.1.1 ID=prot_C-tenellus_contig8393.1.1|Name=mRNA_C-tenellus_contig8393.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=129bp MLCSTSLQASLDRTVKVWDVRSLGRGKGKRSESSAKPKVLAEMPHHRSVNback to top mRNA from alignment at C-tenellus_contig8393:495..1048+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8393.1.1 ID=mRNA_C-tenellus_contig8393.1.1|Name=mRNA_C-tenellus_contig8393.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=554bp|location=Sequence derived from alignment at C-tenellus_contig8393:495..1048+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8393:495..1048+ >mRNA_C-tenellus_contig8393.1.1 ID=mRNA_C-tenellus_contig8393.1.1|Name=mRNA_C-tenellus_contig8393.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=387bp|location=Sequence derived from alignment at C-tenellus_contig8393:495..1048+ (Choristocarpus tenellus KU2346)back to top |