mRNA_C-tenellus_contig8391.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8391.2.1 vs. uniprot
Match: A0A7S1UGK0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGK0_9STRA) HSP 1 Score: 222 bits (565), Expect = 8.590e-66 Identity = 120/293 (40.96%), Postives = 181/293 (61.77%), Query Frame = 1 Query: 397 MESFVIGLLSKYLRQYVLGFKREQLSLSFLKGKGEMRDLEVNCEAINDLL--TNVPVIRFSKIHINRLWVKVPLRQIRVEPIRLNIDEVEVEIVEPTDFVTPTHQPLSR--HGATTKRSKYGVGERIRDSFSLDIDKVIVTFRVLGKRKCPLPGPWTPPAARGVIKGLRFFSTDEHGEECSLEQCWRYSKEHMGTTQDIFIFKKATCQSCHFFLVEDQDPFKKGQVEVVKAVPVDLLLTVRRRSLDNFLKGMQIEISLDRVDFELHVSDGSLSALMHFVVGFGYCLFRQGVSA 1263 MES V +L KYL+ ++ GF++EQL+LS L+G+ EM+D+E+N +A+N+LL V +R I +N L VK+ + +I +PI L IDEV VEI EP F + K SKYG+G+RI D ++++++ +TFR GKRK G WTPPAA + KG+R F+TD +G E +L++ W+Y++ G Q +++FK+ TC S +LV D+ + ++ VPVD+ L +R+ + L G+QIEI++D V + + G L A MHFV GF +C+FRQG A Sbjct: 3 MESMVSSMLGKYLKIFIRGFRKEQLNLSILRGQYEMKDIEINVDAVNELLEYAQVSQVRVRCIRVNSLTVKLSVAKIASKPITLFIDEVTVEIDEPASFDKEAGAGVQELLDKLAVKPSKYGLGDRIGDGICVEVNQLKLTFRTCGKRKVDRVGEWTPPAAVLLAKGIRLFNTDGYGREGNLDEVWQYNRHRRGAMQ-VYLFKRITCASVEVYLV-DERLSPPRIIHGMREVPVDVDLALRKLKATSVLTGVQIEINVDAVSLDFS-APGCLKAFMHFVAGFAFCIFRQGGGA 292
BLAST of mRNA_C-tenellus_contig8391.2.1 vs. uniprot
Match: A0A1E7FW49_9STRA (PH domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW49_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.120e-31 Identity = 89/318 (27.99%), Postives = 157/318 (49.37%), Query Frame = 1 Query: 397 MESFVIGLLSKYLRQYVLGFKREQLSLSFLKGKGEMRDLEVNCEAINDLLTNV-PVIRFSKIHINRLWVKVPL-RQIRVEPIRLNIDEVEVEIVEPTDFVTPTHQ----PLSRHGATTKR----------SKYGVGERIRDSFSLDIDKVIVTFRVLGKRKCPLPGPWTPPAARGVIKGLRFFSTDEHGEECSLEQCWRYSKEHMGTTQDIFIFKKATCQSCHFFLVEDQ-DPFKKGQVEV----VKAVPVDLLLTVRRRSLDNFLKGMQIEISLDRVDFELHVSDGSLSALMHFVVGFGYCLFRQGVSAEMLRDRTR 1287 ME V+G+ + L + ++GF++EQ++ + L GKGE+RD+ +NC+ IND + + P IR +IH++R+ V +R PI ++I V +I EP + P +Q L G ++ YG+ +RI D+ +D+ + F+ GK K PGPWTPP + K L+ D G E + ++ W ++ G I I+KK + C LV DP E + + +++ + V+RR D + +Q+++ + +VD + + S+ L H +G YCL + + L+ + + Sbjct: 1 MEQLVLGIFQEQLAKIIVGFRKEQVNANLLNGKGEIRDVSLNCDVINDSIARLCPYIRLEEIHVSRIGFHVTSWTNLRKAPIIVDIGIVSAKIQEPLSLL-PRNQRRLIELITEGELIRKIAEGLKPFRTGAYGLVDRIVDNLMIDVKSFRLEFQTWGKFKTRRPGPWTPPLLQVECKNLKICMVDAEGNEGNPDEVWHHNG---GRRDSINIYKKVYGE-CQVRLVPQHFDPENNSSTESQPCELAKMKMEIQMAVKRRLRDGAILAVQVDVMIPKVDVD--IDSRSIRLLTHLAIGMQYCLAKDRSFEDPLKSKAK 311
BLAST of mRNA_C-tenellus_contig8391.2.1 vs. uniprot
Match: A0A448ZDS3_9STRA (PH domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZDS3_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.780e-27 Identity = 81/303 (26.73%), Postives = 147/303 (48.51%), Query Frame = 1 Query: 397 MESFVIGLLSKYLRQYVLGFKREQLSLSFLKGKGEMRDLEVNCEAINDLLTNV-PVIRFSKIHINRLWVKVPL-RQIRVEPIRLNIDEVEVEIVEPTDFVTPTHQPLSR---HGATTKR-----------SKYGVGERIRDSFSLDIDKVIVTFRVLGKRKCPLPGPWTPPAARGVIKGLRFFSTDEHGEECSLEQCWRYSKEHMGTTQDIFIFKKATCQSCHFFLVEDQDPFKKGQ-----VEVVKAVPVDLLLTVRRRSLDNFLKGMQIEISLDRVDFELHVSDGSLSALMHFVVGFGYCL 1242 ME V+GL + L + ++GF++EQ++ + L GKGE+RD+ +NC +N+ + P +R +IH++R+ V +R PI ++I V + EP + P+ + + KR S YG+ +RI D+ +D++ + F+ GK K PGPW PP + +K ++ D G E + ++ W +++ G + I++K + C L QDP Q + ++ +++ + RR D + Q ++++ VD ++ D + L HF G YCL Sbjct: 1 MEQLVLGLFQEQLSKVIIGFRKEQVNANLLNGKGEIRDVNLNCSLLNESFARLFPYVRLEEIHVSRIGFHVTSWTNLRRAPIIVDIGHVIARVEEPLGLLPPSELKVIQIITESELIKRLSEGFVPFSVGSSYGLADRIVDNMVVDLESFRLEFQTYGKFKTRRPGPWMPPLLQIEMKHIKACMVDPEGCEGTPDRVWAHNQ---GRRDNFLIYRKVQGE-CKIRL-SPQDPSLNEQENGESYRDIASLKLEIQIATERRLRDGAVMACQFDVTIPEVDVDVDSRD--VRQLAHFASGLQYCL 296
BLAST of mRNA_C-tenellus_contig8391.2.1 vs. uniprot
Match: A0A7M5X4A8_9CNID (Chorein N-terminal domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X4A8_9CNID) HSP 1 Score: 87.0 bits (214), Expect = 1.940e-14 Identity = 44/142 (30.99%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 397 MESFVIGLLSKYLRQYVLGFKREQLSLSFLKGKGEMRDLEVNCEAINDLLTNVPVIRFSKIHINRLWVKVPLRQIRVEPIRLNIDEVEVEIVEPTDFVTPTHQPLSRHGATTKRSKYGVGERIRDSFSLDIDKVIVTFRVLG 822 M + ++K L ++ LSL FLKG+GE+ +LE+ I+DLL P ++ SK+ NR+ KVP ++ +P++L +D V+V+I+ + + P+ + TK +KYG E++ D + I+ + V+F +G Sbjct: 1 MAQWAKNQIAKQLAKFAKNLDPNSLSLKFLKGEGELTNLELEEGVISDLLEFPPWLQLSKVTCNRISAKVPWTSLKSDPLKLILDTVDVQIIASEELRAKSSSPVINKASMTKPTKYGFAEKVVDGMYVSINTLTVSFTSIG 142
BLAST of mRNA_C-tenellus_contig8391.2.1 vs. uniprot
Match: A0A6S7FXV8_PARCT (Chorein N-terminal domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FXV8_PARCT) HSP 1 Score: 86.3 bits (212), Expect = 3.460e-14 Identity = 64/245 (26.12%), Postives = 118/245 (48.16%), Query Frame = 1 Query: 397 MESFVIGLLSKYLRQYVLGFKREQLSLSFLKGKGEMRDLEVNCEAINDLLTNVPVIRFSKIHINRLWVKVPLRQIRVEPIRLNID--EVEVEIVEPTDFVTPTHQPL--SRHGATTKRSKYGVGERIRDSFSLDIDKVIVTFRVLGKRKCPLPGPWTPPAARGVIKGLRFFSTDEHGEECSLEQCWRYSKEHMGTTQDIFIFKKATCQSCHFFLVEDQDPFKKGQVEVVKAVPVDLLLTVRRRSL 1119 M + + + K L ++ ++SL FLKG+GE+R+LE+N + + DLL P IR ++ N++ K+ +++ +PIRL +D EV++E++E +QP A K S+YG E++ D + I+ V++ F+ R A + L STD E+ SL R +H +++ FK+ T + V+ +K GQ + + P+ L+ + + ++ Sbjct: 1 MTTIIKNQIVKQLARFTKNLSPSKISLKFLKGEGELRNLELNEKFLTDLLELPPFIRLTRAVCNKISAKIHWTRLKTDPIRLFLDCVEVDMEMIESVSEDFHLNQPAVSPNQPAREKPSEYGFAEKVVDGMHVTINSVVMAFKTQTFR------------ATFQMSHLSVHSTDPSWEKASLRNT-RIKDDH---GKEVLTFKQITFGTLR---VDADALYKSGQEDSSSSSPLRLITSAAKLNI 226
BLAST of mRNA_C-tenellus_contig8391.2.1 vs. uniprot
Match: A0A1E5WHU5_9POAL (Chorein N-terminal domain-containing protein (Fragment) n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5WHU5_9POAL) HSP 1 Score: 85.5 bits (210), Expect = 5.350e-14 Identity = 69/312 (22.12%), Postives = 139/312 (44.55%), Query Frame = 1 Query: 397 MESFVIGLLSKYLRQYVLGFKREQLSLSFLKGK-GEMRDLEVNCEAINDLLTNVPVIRFSKIHINRLWVKVP-LRQIRVEPIRLNIDEVEVEIVEPTDFVTPTHQPLSRHGATTKRSKYGVGERIRDSFSLDIDKVIVTFRVLGKRKCPLPGPWTPPAARGVIKGLRFFSTDEHGEECSLEQCWRYSKEHMGTTQDIFIFKKATCQSCHFFLVEDQDPFKK-----------------------GQVEVVKAVPVDLLLTVRRRSLDNFLKGMQIEISLDRVDFELHVSDGSLSALMHFVVGFGYCLFRQGV 1257 MES + L L+ ++ F R+Q L +G+ ++ +L++N +A++ L P + + +L + +P + ++VEPI +NID++++ +VE D + + + TK S YG ++I D ++ + V + G + W+PP A + L ++T+E + +L+ +++ I++FKK QS L+ D F G ++ + + +TV+R +N L G+++++ + +S+ L A + F+ G CL R V Sbjct: 1 MESIIARALEYTLKYWLKSFSRDQFKL---QGRTAQLSNLDINGDALHASLGLPPALAVDTARVGKLQITLPSVSNVQVEPIVVNIDKLDLVLVEKDDSENLSPSSTASSPSATKSSGYGYADKIADGMTVQVGIVNLLLETHGGARRQGDATWSPPLAAITFRDLVLYTTNEKWQVVNLKD----ARDFSNNKGFIYVFKKLEWQSLSVDLLPHPDMFTDARFNSSSSHDNKRDDDGAKRMFFGGERFLEGISGEANITVQRTEQNNPL-GLEVQLHITEAVCPA-LSEPGLRAFLRFMTGVSVCLNRGDV 303
BLAST of mRNA_C-tenellus_contig8391.2.1 vs. uniprot
Match: A0A6V7UVT8_9BILA (Hypothetical protein n=2 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7UVT8_9BILA) HSP 1 Score: 84.3 bits (207), Expect = 1.390e-13 Identity = 45/138 (32.61%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 397 MESFVIGLLSKYLRQYVLGFKREQLSLSFLKGKGEMRDLEVNCEAINDLLTNVPVIRFSKIHINRLWVKVPLRQIRVEPIRLNIDEVEVEIVEPTDFVTPTHQPLSRHGATTKRSKYGVGERIRDSFSLDIDKVIVTF 810 M S + + K+L + K EQ+SL L+GKG++R+LE+N E I++ L P ++ K H + + VK+P QI+ P++L ++E++V I VTPT +S+ + T Y + ER+ + SL + + + F Sbjct: 1 MASLIKNQIVKHLSTFARNLKPEQISLEVLRGKGQLRNLELNEEVISERLEFPPWLKIVKAHCSSVTVKIPWTQIKSAPVQLYVEELQVVI----RLVTPTSPNISKKTSPTHNKSYDLPERVLECLSLYVQSIEIYF 134
BLAST of mRNA_C-tenellus_contig8391.2.1 vs. uniprot
Match: A0A6V7TPZ9_9BILA (Hypothetical protein n=1 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7TPZ9_9BILA) HSP 1 Score: 84.0 bits (206), Expect = 1.710e-13 Identity = 45/138 (32.61%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 397 MESFVIGLLSKYLRQYVLGFKREQLSLSFLKGKGEMRDLEVNCEAINDLLTNVPVIRFSKIHINRLWVKVPLRQIRVEPIRLNIDEVEVEIVEPTDFVTPTHQPLSRHGATTKRSKYGVGERIRDSFSLDIDKVIVTF 810 M S + + K+L + K EQ+SL L+GKG++R+LE+N E I++ L P ++ K H + + VK+P QI+ P++L ++E++V I VTPT +S+ + T Y + ER+ + SL + + + F Sbjct: 1 MASLIKNQIVKHLSTFARNLKPEQISLEVLRGKGQLRNLELNEEVISERLEFPPWLKIVKAHCSSVIVKIPWTQIKSAPVQLYVEELQVVI----RLVTPTSPNISKKTSPTHNKSYDLPERVLECLSLYVQSIEIYF 134
BLAST of mRNA_C-tenellus_contig8391.2.1 vs. uniprot
Match: UPI00106C25AC (UHRF1-binding protein 1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C25AC) HSP 1 Score: 83.2 bits (204), Expect = 3.380e-13 Identity = 81/316 (25.63%), Postives = 146/316 (46.20%), Query Frame = 1 Query: 397 MESFVIGLLSKYLRQYVLGFKREQLSLSFLKGKGEMRDLEVNCEAINDLLTNVPVIRFSKIHINRLWVKVPLRQIRVEPIRLNID--EVEVEIVEPTDF--VTPTHQPLSRHGATTKRSKYGVGERIRDSFSLDIDKVIVTFRVLGKRKCPLPGPWTPPAARGVIK--GLRFFSTDEHGEECSLEQCWRYSKEHMGTTQDIFIFKKATCQSCHFFLVEDQDPFKKGQVEV-VKAVPVDLLLTVRRRSLDNFLKGMQIEISLDRVDFELH-VSDGSLSALMHF----VVGFGYCLFRQGVSAEMLRDRTRIAKSNST 1308 M + + + K L ++ ++SL FLKG+GE+R+LE+N + + DLL P IR ++ N++ K+ +++ +PIRL +D EV++E++E +D + T + A K S+YG E++ D + I+ V++ F+ P R + L STD E+ SL K+ G +++ FK+ T + ++ +K GQ E + + P+ L+ + + L+ +K + S+ V LH +SD L L H V GF + + + +A +ST Sbjct: 1 MTTIIKNQIVKQLARFTKNLSPSKISLKFLKGEGELRNLELNEKFLTDLLELPPFIRLTRAVCNKISAKIHWTRLKTDPIRLFLDCVEVDMEMIEVSDDFNLKQTSSVTANQVAREKPSEYGFAEKVVDGMHVTINSVVMAFKT--------------PTFRATFQMSHLSVHSTDPSWEKSSLRNT--RIKDEKG--KEVLTFKQITFGTLR---IDADALYKSGQEESSLSSSPLRLITSAAK--LNIVIKKKIEDCSV--VAARLHAISDDILWVLTHVQLRAVAGFAKSVVQVVEKCKKSEPAPSVASDDST 291
BLAST of mRNA_C-tenellus_contig8391.2.1 vs. uniprot
Match: A0A3L6G6T4_MAIZE (Zinc finger BED domain-containing protein RICESLEEPER 2 n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6G6T4_MAIZE) HSP 1 Score: 83.2 bits (204), Expect = 3.630e-13 Identity = 74/313 (23.64%), Postives = 139/313 (44.41%), Query Frame = 1 Query: 397 MESFVIGLLSKYLRQYVLGFKREQLSLSFLKGK-GEMRDLEVNCEAINDLLTNVPVIRFSKIHINRLWVKVP-LRQIRVEPIRLNIDEVEVEIVEPTDFVTPTHQPLSRHGAT------TKRSKYGVGERIRDSFSLDIDKVIVTFRVLGKRKCPLPGPWTPPAARGVIKGLRFFSTDEHGEECSLEQCWRYSKEHMGTTQDIFIFKKATCQSCHFFLVEDQDPFKKGQVEVVKAVPVDLLLTVRRRSL---DNFLKGMQIE--ISLDR--------VDFELHV--------SDGSLSALMHFVVGFGYCLFR 1248 MES + L L+ ++ F R+Q L +G+ ++ +L++N +A++ L P + + +L + +P L ++VEPI +NID++++ +VE D + LS +T TK S YG ++I D ++ + V + G W+PP A + L ++T+E + +L++ +++ I++FKK QS L+ D F + +R + FL+G+ E I++ R ++ +LH+ S+ L A + F+ G CL R Sbjct: 1 MESIIARALEYTLKYWLKSFSRDQFKL---QGRTAQLSNLDINGDALHASLGLPPALAVDTARVGKLQITLPSLSNVQVEPIEVNIDKLDLVLVEKDDS-----ENLSSPSSTASXXXXTKSSGYGYADKIADGMTVQVGIVNLLLETHGGAHRQGDATWSPPLAAITFRDLVLYTTNEKWQVVNLKE----ARDFSNNKGFIYVFKKLEWQSLSVDLLPHPDMFADARFNSSXXXXXXXXXXXAKRMFFGGERFLEGISGEANITVQRTEQNNPLGLEVQLHITEAVCPALSEPGLRAFLRFMTGVSVCLNR 301 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8391.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8391.2.1 >prot_C-tenellus_contig8391.2.1 ID=prot_C-tenellus_contig8391.2.1|Name=mRNA_C-tenellus_contig8391.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=312bp MESFVIGLLSKYLRQYVLGFKREQLSLSFLKGKGEMRDLEVNCEAINDLLback to top mRNA from alignment at C-tenellus_contig8391:2489..6128+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8391.2.1 ID=mRNA_C-tenellus_contig8391.2.1|Name=mRNA_C-tenellus_contig8391.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3640bp|location=Sequence derived from alignment at C-tenellus_contig8391:2489..6128+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8391:2489..6128+ >mRNA_C-tenellus_contig8391.2.1 ID=mRNA_C-tenellus_contig8391.2.1|Name=mRNA_C-tenellus_contig8391.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=936bp|location=Sequence derived from alignment at C-tenellus_contig8391:2489..6128+ (Choristocarpus tenellus KU2346)back to top |