mRNA_C-tenellus_contig8390.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8390.2.1 vs. uniprot
Match: D7FPJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPJ3_ECTSI) HSP 1 Score: 212 bits (539), Expect = 1.510e-61 Identity = 95/120 (79.17%), Postives = 104/120 (86.67%), Query Frame = 1 Query: 1 KGIMRCKRCRTYINPFVGWLNNGRQWRCNVCGMSNDVPTSYFCHLDADGQRRDKAQRPELCNGSVELVAPAEYMVRPPQPPVYMFVIDVSAPAVGCGMIKAAAETIKDCLDNLPGGERTM 360 +GIMRCKRCRTYINP+VGWL+NGRQWRCNVCGM ND P SY CHLD DG+R D+A+RPEL SVE+VAP+EYMVRPPQPPVYMFVIDVS PAV GM+ AAETIK CLDNLPG ERTM Sbjct: 229 QGIMRCKRCRTYINPYVGWLSNGRQWRCNVCGMVNDTPPSYQCHLDQDGRRSDRAERPELGKASVEMVAPSEYMVRPPQPPVYMFVIDVSQPAVASGMVHVAAETIKACLDNLPGEERTM 348
BLAST of mRNA_C-tenellus_contig8390.2.1 vs. uniprot
Match: A0A7S4D505_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D505_HETAK) HSP 1 Score: 200 bits (509), Expect = 3.500e-58 Identity = 88/118 (74.58%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 4 GIMRCKRCRTYINPFVGWLNNGRQWRCNVCGMSNDVPTSYFCHLDADGQRRDKAQRPELCNGSVELVAPAEYMVRPPQPPVYMFVIDVSAPAVGCGMIKAAAETIKDCLDNLPGGERT 357 GI+RCKRCRTYINPFV W+ NGR+WRCN+CGM N+VPT+YFCHLDADGQRRD+ QRPELC GSVE VAP EYMVRPPQPPVY FVIDVSA A G + AA TI+ CL +LPG RT Sbjct: 39 GIVRCKRCRTYINPFVSWVENGRRWRCNMCGMVNEVPTAYFCHLDADGQRRDREQRPELCKGSVEFVAPGEYMVRPPQPPVYFFVIDVSAQAAQNGSVAAACATIRRCLSDLPGSPRT 156
BLAST of mRNA_C-tenellus_contig8390.2.1 vs. uniprot
Match: A0A7S2W394_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W394_9STRA) HSP 1 Score: 194 bits (494), Expect = 6.960e-58 Identity = 83/123 (67.48%), Postives = 99/123 (80.49%), Query Frame = 1 Query: 4 GIMRCKRCRTYINPFVGWLNNGRQWRCNVCGMSNDVPTSYFCHLDADGQRRDKAQRPELCNGSVELVAPAEYMVRPPQPPVYMFVIDVSAPAVGCGMIKAAAETIKDCLDNLPGGERTMASLF 372 GI+RC+RCRTYINPFV W+NNGRQWRCN+CG N+VP SYFCHL+ DG R+D+ +RPELC GSVE+ APAEYM+RPPQ PVY+FV+DVSA AV G+++ AA TIK CLD LPG RT Sbjct: 181 GIIRCRRCRTYINPFVSWVNNGRQWRCNICGYVNEVPQSYFCHLNTDGTRKDRNERPELCKGSVEIQAPAEYMLRPPQAPVYVFVLDVSAGAVASGVLQTAAATIKACLDKLPGAPRTQVGFI 303
BLAST of mRNA_C-tenellus_contig8390.2.1 vs. uniprot
Match: A0A836CAX8_9STRA (Sec23/Sec24 trunk domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX8_9STRA) HSP 1 Score: 201 bits (511), Expect = 9.760e-58 Identity = 91/124 (73.39%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 1 KGIMRCKRCRTYINPFVGWLNNGRQWRCNVCGMSNDVPTSYFCHLDADGQRRDKAQRPELCNGSVELVAPAEYMVRPPQPPVYMFVIDVSAPAVGCGMIKAAAETIKDCLDNLPGGERTMASLF 372 +GI+RCKRCRTYINPFV W+NNGRQWRCNVCGM NDVPTSYFCHLDA+G RRD+ QRPEL GSVE+ APAEYMVRPP PVY FVIDVSA AV GM+ AA IK CLD +PG ER+ L Sbjct: 189 QGIVRCKRCRTYINPFVSWMNNGRQWRCNVCGMVNDVPTSYFCHLDANGMRRDRDQRPELAYGSVEIQAPAEYMVRPPVAPVYFFVIDVSANAVNTGMVAAAVAAIKACLDRVPGDERSQFGLI 312
BLAST of mRNA_C-tenellus_contig8390.2.1 vs. uniprot
Match: A0A8J2SWF0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWF0_9STRA) HSP 1 Score: 201 bits (510), Expect = 3.230e-57 Identity = 86/122 (70.49%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 4 GIMRCKRCRTYINPFVGWLNNGRQWRCNVCGMSNDVPTSYFCHLDADGQRRDKAQRPELCNGSVELVAPAEYMVRPPQPPVYMFVIDVSAPAVGCGMIKAAAETIKDCLDNLPGGERTMASL 369 GI+RCK+CR Y+NPFV W+NNGRQWRCNVCG SNDVP SYFC LD G+RRD+ QRPEL GSVELVAP EYMVRPPQPPVY+F +DVSAP+V G++ AA TIK CLD+LPG RT ++ Sbjct: 517 GIVRCKKCRAYVNPFVAWVNNGRQWRCNVCGFSNDVPNSYFCQLDERGRRRDRDQRPELSKGSVELVAPGEYMVRPPQPPVYVFAVDVSAPSVASGLVNVAASTIKKCLDSLPGAPRTQVAV 638
BLAST of mRNA_C-tenellus_contig8390.2.1 vs. uniprot
Match: A0A813A2P3_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813A2P3_SYMMI) HSP 1 Score: 180 bits (456), Expect = 2.650e-55 Identity = 79/117 (67.52%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 4 GIMRCKRCRTYINPFVGWLNNGRQWRCNVCGMSNDVPTSYFCHLDADGQRRDKAQRPELCNGSVELVAPAEYMVRPPQPPVYMFVIDVSAPAVGCGMIKAAAETIKDCLDNLPGGER 354 GI+RCKRCRTYINPFV W++NGR+WRCN+CGM NDVPTSYF HLD +GQRRDK QRPEL SVE +AP +YMVRPPQPPVY FVIDV++ A GM+ +I+ LD+LPG R Sbjct: 21 GIVRCKRCRTYINPFVSWVDNGRRWRCNICGMLNDVPTSYFSHLDQNGQRRDKDQRPELSRCSVEFIAPGDYMVRPPQPPVYFFVIDVTSGAGSSGMLSHVVSSIRRSLDDLPGNPR 137
BLAST of mRNA_C-tenellus_contig8390.2.1 vs. uniprot
Match: F0YAP0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAP0_AURAN) HSP 1 Score: 192 bits (489), Expect = 2.260e-54 Identity = 86/124 (69.35%), Postives = 99/124 (79.84%), Query Frame = 1 Query: 4 GIMRCKRCRTYINPFVGWLNNGRQWRCNVCGMSNDVPTSYFCHLDAD-GQRRDKAQRPELCNGSVELVAPAEYMVRPPQPPVYMFVIDVSAPAVGCGMIKAAAETIKDCLDNLPGGERTMASLF 372 GI+RCK+CR Y+NPFV W+NNGRQWRCNVCG NDVP SYFC LD + G+RRDK QRPELC GSVELVAP EYMVRPPQPPV++FVIDVSA AV GM+ A+TI+ LD LPG RT ++ Sbjct: 978 GIVRCKKCRAYVNPFVSWVNNGRQWRCNVCGFVNDVPNSYFCQLDPETGERRDKQQRPELCKGSVELVAPGEYMVRPPQPPVFVFVIDVSAGAVATGMLGVVAKTIRASLDGLPGAPRTQVAVI 1101
BLAST of mRNA_C-tenellus_contig8390.2.1 vs. uniprot
Match: A0A067CH61_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CH61_SAPPC) HSP 1 Score: 189 bits (481), Expect = 9.520e-54 Identity = 84/123 (68.29%), Postives = 103/123 (83.74%), Query Frame = 1 Query: 4 GIMRCKRCRTYINPFVGWLNNGRQWRCNVCGMSNDVPTSYFCHLDADGQRRDKAQRPELCNGSVELVAPAEYMVRPPQPPVYMFVIDVSAPAVGCGMIKAAAETIKDCLDNLPGGERTMASLF 372 G++RCK CRTYINPFV W++NGR+WRCN+CG+SNDVP+SYFCHL DGQR+DK +RPELC GSVE+VA +EYM+RPP PPVY+FVIDVSA A+ GM++ AAETI+ LD+LPG RT L Sbjct: 245 GVVRCKSCRTYINPFVQWVDNGRRWRCNLCGVSNDVPSSYFCHLGPDGQRQDKDERPELC-GSVEIVASSEYMMRPPTPPVYVFVIDVSAQAIASGMVQVAAETIQSQLDSLPGDPRTRFGLI 366
BLAST of mRNA_C-tenellus_contig8390.2.1 vs. uniprot
Match: T0QMG2_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QMG2_SAPDV) HSP 1 Score: 189 bits (481), Expect = 1.050e-53 Identity = 84/123 (68.29%), Postives = 103/123 (83.74%), Query Frame = 1 Query: 4 GIMRCKRCRTYINPFVGWLNNGRQWRCNVCGMSNDVPTSYFCHLDADGQRRDKAQRPELCNGSVELVAPAEYMVRPPQPPVYMFVIDVSAPAVGCGMIKAAAETIKDCLDNLPGGERTMASLF 372 G++RCK CRTYINPFV W++NGR+WRCN+CG+SNDVP+SYFCHL DGQR+DK +RPELC GSVE+VA +EYM+RPP PPVY+FVIDVSA A+ GM++ AAETI+ LD+LPG RT L Sbjct: 143 GVVRCKSCRTYINPFVQWVDNGRRWRCNLCGVSNDVPSSYFCHLGPDGQRQDKDERPELC-GSVEIVASSEYMMRPPTPPVYVFVIDVSAQAIASGMVQVAAETIQSQLDSLPGDPRTRFGLI 264
BLAST of mRNA_C-tenellus_contig8390.2.1 vs. uniprot
Match: A0A2D4BP64_PYTIN (Putative vesicle coat complex COPII subunit SEC24/subunit SFB2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP64_PYTIN) HSP 1 Score: 189 bits (481), Expect = 2.520e-53 Identity = 81/118 (68.64%), Postives = 101/118 (85.59%), Query Frame = 1 Query: 4 GIMRCKRCRTYINPFVGWLNNGRQWRCNVCGMSNDVPTSYFCHLDADGQRRDKAQRPELCNGSVELVAPAEYMVRPPQPPVYMFVIDVSAPAVGCGMIKAAAETIKDCLDNLPGGERT 357 G++RC+ CRTY+NPFV W++NGR+WRCN+CG+SNDVP+SYFCHL + QR+D+ +RPEL GSVE+VAP+EYM+RPPQPP YMFVIDVSAPAV G ++ A ETIK+ LDNLPG RT Sbjct: 408 GVVRCRHCRTYVNPFVQWVDNGRRWRCNLCGVSNDVPSSYFCHLGPNQQRQDREERPELNCGSVEIVAPSEYMMRPPQPPCYMFVIDVSAPAVSSGAVQIAVETIKEQLDNLPGAPRT 525 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8390.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8390.2.1 >prot_C-tenellus_contig8390.2.1 ID=prot_C-tenellus_contig8390.2.1|Name=mRNA_C-tenellus_contig8390.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=128bp MRCKRCRTYINPFVGWLNNGRQWRCNVCGMSNDVPTSYFCHLDADGQRRDback to top mRNA from alignment at C-tenellus_contig8390:2167..4495- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8390.2.1 ID=mRNA_C-tenellus_contig8390.2.1|Name=mRNA_C-tenellus_contig8390.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2329bp|location=Sequence derived from alignment at C-tenellus_contig8390:2167..4495- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8390:2167..4495- >mRNA_C-tenellus_contig8390.2.1 ID=mRNA_C-tenellus_contig8390.2.1|Name=mRNA_C-tenellus_contig8390.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=384bp|location=Sequence derived from alignment at C-tenellus_contig8390:2167..4495- (Choristocarpus tenellus KU2346)back to top |