mRNA_C-tenellus_contig8388.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8388.1.1 vs. uniprot
Match: A0A6H5KTE1_9PHAE (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTE1_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.060e-46 Identity = 87/140 (62.14%), Postives = 108/140 (77.14%), Query Frame = 1 Query: 28 RFLTLGLVASMASSLAVTQSPRLLILGGTGFIGSTIAKMAVKSGFQVTSLSRRGAPSPDTDPESYPANGVEWLQGDATDPAVVSDVIKNGP--YVGVVHAVGMLFAGKLNRFASGSGSIPNPGCDYDQITRQTAFAAATA 441 + LTL + ++ A+ +P++L+LGGTGFIGST++++AV SG +VTSLSRRG PSPD+DP GV +L+GDATDPAVV VI +G Y GVVHAVGMLFAG LNRFASGSGS+P+PG YD+ITRQTAFAA A Sbjct: 2 QLLTLLIALAVVGDTAMALAPKILVLGGTGFIGSTVSRIAVDSGCEVTSLSRRGTPSPDSDP----LPGVNFLKGDATDPAVVRQVINDGKCDYDGVVHAVGMLFAGSLNRFASGSGSVPDPGTTYDKITRQTAFAATAA 137
BLAST of mRNA_C-tenellus_contig8388.1.1 vs. uniprot
Match: A0A835YPV7_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV7_9STRA) HSP 1 Score: 123 bits (309), Expect = 8.140e-32 Identity = 69/128 (53.91%), Postives = 88/128 (68.75%), Query Frame = 1 Query: 58 MASSLAVTQSPRLLILGGTGFIGSTIAKMAVKSGFQVTSLSRRGAPSPDTDPESYPANGVEWLQGDATDPAVVSDVIKNGPYVGVVHAVGMLFAGKLNRFASGSGSIPNPGCDYDQITRQTAFAAATA 441 MA+S ++ + RLL+LGGTGF+G TIA+ AV G+ VTSLSRRG D D + + WL+GDA+D V+ V++ G + VVHA+GML LNRFASGSGS+P G YDQ+TRQT FAAA A Sbjct: 26 MATSSSLAAN-RLLVLGGTGFVGGTIAQEAVNRGYSVTSLSRRGRLD-DAD------DRITWLEGDASDAGTVARVVQEGEFDAVVHAIGMLLDNSLNRFASGSGSVPGEGATYDQVTRQTVFAAADA 145
BLAST of mRNA_C-tenellus_contig8388.1.1 vs. uniprot
Match: L1I751_GUITC (Epimerase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I751_GUITC) HSP 1 Score: 120 bits (300), Expect = 1.300e-30 Identity = 61/125 (48.80%), Postives = 90/125 (72.00%), Query Frame = 1 Query: 52 ASMASSLAVTQSPRLLILGGTGFIGSTIAKMAVKSGFQVTSLSRRGAPSPDTDPESYPANGVEWLQGDATDPAVVSDVIKNGPYVGVVHAVGMLFAGKLNRFASGSGSIPNPGCDYDQITRQTAF 426 AS ASS + + ++L+LGGTGF+GS +A++A++ G++V +LSRRG P+ + S A+ + W +GDAT A + V++ G + VVHA+GMLF +LN++ASGSGS+P G YD+ITRQTAF Sbjct: 5 ASQASSSSAKKG-KILVLGGTGFVGSNVAQLAIERGYEVVALSRRGEPTGAS--RSGAASKIAWRKGDATKKADIEKVMEEGGFTAVVHAIGMLFETELNKYASGSGSVPRAGSTYDEITRQTAF 126
BLAST of mRNA_C-tenellus_contig8388.1.1 vs. uniprot
Match: C1N367_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N367_MICPC) HSP 1 Score: 117 bits (293), Expect = 5.200e-29 Identity = 61/118 (51.69%), Postives = 80/118 (67.80%), Query Frame = 1 Query: 91 RLLILGGTGFIGSTIAKMAVKSGFQVTSLSRRGAPSPDT-DPESYPANGVEWLQGDATDPAVVSDVIKNGPYVGVVHAVGMLFAGKLNRFASGSGSIPNPGCDYDQITRQTAFAAATA 441 +LL+LGGTGF+G + + A++ G+ V S+SRRGAPS P S V+W GD T P+ V DV+ G +VG VHAVGML A LN +ASGSGS+P+ G YD +TR++AF AA A Sbjct: 60 KLLVLGGTGFVGGNVIERALEGGYSVVSISRRGAPSASARGPTSSLDGRVDWRVGDVTLPSTVRDVLAEGGFVGCVHAVGMLLASDLNAYASGSGSVPSAGSTYDDVTRKSAFHAADA 177
BLAST of mRNA_C-tenellus_contig8388.1.1 vs. uniprot
Match: A0A7S0QX38_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QX38_9CHLO) HSP 1 Score: 116 bits (291), Expect = 1.080e-28 Identity = 58/121 (47.93%), Postives = 82/121 (67.77%), Query Frame = 1 Query: 82 QSPRLLILGGTGFIGSTIAKMAVKSGFQVTSLSRRGAPSPDTDPESYPANGVEWLQGDAT-DPAVVSDVIKNGPYVGVVHAVGMLFAGKLNRFASGSGSIPNPGCDYDQITRQTAFAAATA 441 S ++L+LGGTG++GS + ++A+ G+ V S+SRRG S GV+W +GD DPA+V+ ++ G + GV+HA+GML N+FASGSGS+P PG YDQ+TRQTA AAA+A Sbjct: 86 SSKKILVLGGTGYVGSEVCRIALSRGYSVVSVSRRGLVE-----GSDQLKGVDWRKGDVVADPAIVAHILSEGGFDGVMHAIGMLLESDANKFASGSGSVPTPGSTYDQVTRQTALAAASA 201
BLAST of mRNA_C-tenellus_contig8388.1.1 vs. uniprot
Match: C1E365_MICCC (Epimerase domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E365_MICCC) HSP 1 Score: 114 bits (284), Expect = 8.020e-28 Identity = 61/120 (50.83%), Postives = 77/120 (64.17%), Query Frame = 1 Query: 91 RLLILGGTGFIGSTIAKMAVKSGFQVTSLSRRGAPSPDTDPESYPA---NGVEWLQGDATDPAVVSDVIKNGPYVGVVHAVGMLFAGKLNRFASGSGSIPNPGCDYDQITRQTAFAAATA 441 +LL+LGGTGFIGS I + A+ SG+ V S+SRRG P DP YP N V+W +GD P ++ V+ G +V +HAVGML A +N ASGSGS P+PG YD +TR TA AA A Sbjct: 51 KLLVLGGTGFIGSKICERALSSGYDVVSISRRG--DPPGDPHRYPDGVWNRVDWRKGDCVQPDTIATVLGEGGFVACIHAVGMLLASDINALASGSGSKPSPGATYDDVTRVTALNAADA 168
BLAST of mRNA_C-tenellus_contig8388.1.1 vs. uniprot
Match: A0A7S0S8B4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0S8B4_9CHLO) HSP 1 Score: 110 bits (275), Expect = 1.920e-27 Identity = 61/121 (50.41%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 82 QSPRLLILGGTGFIGSTIAKMAVKSGFQVTSLSRRGAPSPDTDPESYPANGVEWLQGDA-TDPAVVSDVIKNGPYVGVVHAVGMLFAGKLNRFASGSGSIPNPGCDYDQITRQTAFAAATA 441 + +LL+LGGTGF+GS I A+++GF+V S+SRRG P PD + + VEW GD P V D + G YVG +HAVGML LN ASGSGS+PN G YD +TR TA AA A Sbjct: 68 EKGKLLVLGGTGFVGSNICVRAIEAGFRVVSVSRRGLP-PDGIEQGSLLSKVEWRAGDLLAAPGTVRDTLAEGGYVGCIHAVGMLLTSDLNALASGSGSMPNAGATYDDVTRVTASTAADA 187
BLAST of mRNA_C-tenellus_contig8388.1.1 vs. uniprot
Match: A0A7S3QJZ9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJZ9_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.730e-23 Identity = 52/122 (42.62%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 91 RLLILGGTGFIGSTIAKMAVKSGFQVTSLSRRGAPSPDTDPESYPANGVEWLQGDATDPAVVSDVIKNGPYVGVVHAVGMLFAG-----KLNRFASGSGSIPNPGCDYDQITRQTAFAAATA 441 ++L+LGG+GF+G TIA+ A G+ VTSLSRRG P+ DP+ + + +++ GDA + V+ +++ G Y + H +G+L G NRF SGSGS+P YD+ITR TAF A A Sbjct: 58 KILVLGGSGFLGGTIAQRAALEGYSVTSLSRRG--KPEKDPKDFTNDKIDYRIGDARESLVIENILDEGDYTAIFHCIGILLDGDSGLRSFNRFVSGSGSVPEENATYDEITRLTAFNAIAA 177
BLAST of mRNA_C-tenellus_contig8388.1.1 vs. uniprot
Match: B7FWD7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWD7_PHATC) HSP 1 Score: 99.4 bits (246), Expect = 3.610e-22 Identity = 57/131 (43.51%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 91 RLLILGGTGFIGSTIAKMAVKSGFQVTSLSRRGAP----SPDTDPESYPANG----------VEWLQGDATDPAVVSDVIKNGPYVGVVHAVGMLF-----AGKLNRFASGSGSIPNPGCDYDQITRQTAF 426 +LL+LGGTGF+G T+ K A+ G+ VTSLSRRG P S T S A+ +++ QGDA + ++ G YVGV+H +G+LF G NRF SGSGS+P+ YD ITR TAF Sbjct: 56 KLLVLGGTGFLGQTVCKRAIVEGYDVTSLSRRGLPPVTASDKTVSSSSSASSSIMNMASSIKIDYRQGDARQKEAIEAILNEGGYVGVIHTIGLLFDETSGMGSYNRFVSGSGSLPDADSTYDTITRLTAF 186
BLAST of mRNA_C-tenellus_contig8388.1.1 vs. uniprot
Match: A0A7R9ZJZ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZJZ2_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.900e-22 Identity = 51/126 (40.48%), Postives = 76/126 (60.32%), Query Frame = 1 Query: 58 MASSLAVTQSPRLLILGGTGFIGSTIAKMAVKSGFQVTSLSRRGAPSPDTDPESYPANGVEWLQGDATDPAVVSDVIKNGPYVGVVHAVGMLF-----AGKLNRFASGSGSIPNPGCDYDQITRQT 420 M+SS T+ ++L+LGGTGF+G T+ + A G+ VTSLSRRG P D +S ++ ++ GDA + +++ G YV V+H +G+LF G NRF SGSGS+P+ Y+ IT+ T Sbjct: 56 MSSSSGNTKKGKVLVLGGTGFVGQTVCRRASLEGYSVTSLSRRGLPPSAADSKSSSSSNTDYRIGDARKVEPIRNILNEGGYVAVIHCIGLLFDDASGLGTYNRFVSGSGSVPDTNSTYETITQLT 181 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8388.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8388.1.1 >prot_C-tenellus_contig8388.1.1 ID=prot_C-tenellus_contig8388.1.1|Name=mRNA_C-tenellus_contig8388.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=147bp MEGKRKAATRFLTLGLVASMASSLAVTQSPRLLILGGTGFIGSTIAKMAVback to top mRNA from alignment at C-tenellus_contig8388:222..1633- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8388.1.1 ID=mRNA_C-tenellus_contig8388.1.1|Name=mRNA_C-tenellus_contig8388.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1412bp|location=Sequence derived from alignment at C-tenellus_contig8388:222..1633- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8388:222..1633- >mRNA_C-tenellus_contig8388.1.1 ID=mRNA_C-tenellus_contig8388.1.1|Name=mRNA_C-tenellus_contig8388.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=441bp|location=Sequence derived from alignment at C-tenellus_contig8388:222..1633- (Choristocarpus tenellus KU2346)back to top |