mRNA_C-tenellus_contig835.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig835.1.1
Unique NamemRNA_C-tenellus_contig835.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig835.1.1 vs. uniprot
Match: A0A6H5JP74_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP74_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 2.110e-49
Identity = 88/120 (73.33%), Postives = 100/120 (83.33%), Query Frame = 1
Query:   16 KVFRGTSNAGPPLDVWSVGVILFALLCGHLPFEGTDLLGHSRPRDSVIRKRIMQCRYKTDESVSPEAK-ARNGGGE-----RDLLRRMLKLDPTERTSIPEIFNHCWLRIRNITSLDLQV 357
            +VFRGTSNAGPPLDVWS+GVILFALLCG LPFEG+DL G +RPR++ IR+RIM+CRYK  ES+SPEAK AR   G+     +DLLRRMLKLDP ER SIPEIFNH WLR RN+TSLD QV
Sbjct:  317 EVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPAESLSPEAKVARGTRGKTMFQAKDLLRRMLKLDPNERASIPEIFNHSWLRFRNVTSLDNQV 436          
BLAST of mRNA_C-tenellus_contig835.1.1 vs. uniprot
Match: D8LST6_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST6_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 1.840e-48
Identity = 84/113 (74.34%), Postives = 94/113 (83.19%), Query Frame = 1
Query:   16 KVFRGTSNAGPPLDVWSVGVILFALLCGHLPFEGTDLLGHSRPRDSVIRKRIMQCRYKTDESVSPEAKARNGGGERDLLRRMLKLDPTERTSIPEIFNHCWLRIRNITSLDLQ 354
            +VFRGTSNAGPPLDVWS+GVILFALLCG LPFEG+DL G +RPR++ IR+RIM+CRYK  ES+SPEAK        DLLRRMLKLDP ER SIPEIFNH WLR RN+TSLD Q
Sbjct:  289 EVFRGTSNAGPPLDVWSIGVILFALLCGRLPFEGSDLQGTNRPREAAIRRRIMECRYKPVESLSPEAK--------DLLRRMLKLDPNERASIPEIFNHSWLRFRNVTSLDNQ 393          
BLAST of mRNA_C-tenellus_contig835.1.1 vs. uniprot
Match: A0A7S3M4V4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4V4_9STRA)

HSP 1 Score: 148 bits (373), Expect = 3.620e-41
Identity = 65/103 (63.11%), Postives = 82/103 (79.61%), Query Frame = 1
Query:   16 KVFRGTSNAGPPLDVWSVGVILFALLCGHLPFEGTDLLGHSRPRDSVIRKRIMQCRYKTDESVSPEAKARNGGGERDLLRRMLKLDPTERTSIPEIFNHCWLR 324
            +VF+GTSNAGPPLDVWS+GVILF +LCG LPFEG DL+G  RPR+ +I+ RIM+C+YK D+ + PE K        DL+RRML++DP+ER SIPEIFNH W+R
Sbjct:   17 EVFKGTSNAGPPLDVWSLGVILFTMLCGRLPFEGQDLIGTKRPREQIIKSRIMKCQYKIDDHLGPEVK--------DLVRRMLQVDPSERASIPEIFNHVWMR 111          
BLAST of mRNA_C-tenellus_contig835.1.1 vs. uniprot
Match: A0A836CH35_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH35_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.820e-39
Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 1
Query:   16 KVFRGTSNAGPPLDVWSVGVILFALLCGHLPFEGTDLLGHSRPRDSVIRKRIMQCRYKTDESVSPEAKARNGGGERDLLRRMLKLDPTERTSIPEIFNHCWLRIRNITSLDLQ 354
            +VFRGTSNAGPPLDVWS+GV+LFA LCG LPFEGTDL G  R +++ IR+RI++C YK ++ +S EAK        DL+RRML+ DP+ER SIP++ +HCWLR R++  LDLQ
Sbjct:  374 EVFRGTSNAGPPLDVWSLGVMLFAALCGRLPFEGTDLRGAHRAKEASIRRRILRCEYKMEDGLSSEAK--------DLVRRMLRPDPSERASIPDVLSHCWLRSRHVACLDLQ 478          
BLAST of mRNA_C-tenellus_contig835.1.1 vs. uniprot
Match: A0A024GBW1_9STRA (Protein kinase domain-containing protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GBW1_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.890e-38
Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 1
Query:   16 KVFRGTSNAGPPLDVWSVGVILFALLCGHLPFEGTDLLGHSRPRDSVIRKRIMQCRYKTDESVSPEAKARNGGGERDLLRRMLKLDPTERTSIPEIFNHCWLRIRNITSL 345
            +VFRGTSNAGPPLDVWS+GVIL+A+LCG LPFEG DL G +RPR+SVIR RIMQC+YK D+ +SP           DL+ +MLKLDP ER +IPEIF H W+R  + T+L
Sbjct:  238 EVFRGTSNAGPPLDVWSLGVILYAILCGRLPFEGPDLQGSNRPRESVIRSRIMQCQYKLDDHLSPCVT--------DLIAQMLKLDPNERATIPEIFTHSWVRGISSTTL 339          
BLAST of mRNA_C-tenellus_contig835.1.1 vs. uniprot
Match: A0A1V9ZXR3_9STRA (Kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXR3_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.690e-38
Identity = 69/112 (61.61%), Postives = 88/112 (78.57%), Query Frame = 1
Query:   16 KVFRGTSNAGPPLDVWSVGVILFALLCGHLPFEGTDLLGHSRPRDSVIRKRIMQCRYKTDESVSPEAKARNGGGERDLLRRMLKLDPTERTSIPEIFNHCWLRIR-NITSLD 348
            +VFRGTSNAGPPLDVWS+GVILFA++CG LPFEGTDL G +RPR++VIR RIM+ ++K DE +SP+          DL+ RMLKLDP ER +IPEIF+H W+R + N +S+D
Sbjct:  289 EVFRGTSNAGPPLDVWSLGVILFAIVCGRLPFEGTDLKGTNRPRENVIRNRIMRAQFKLDEHLSPDVT--------DLITRMLKLDPVERATIPEIFSHPWIRGKSNFSSID 392          
BLAST of mRNA_C-tenellus_contig835.1.1 vs. uniprot
Match: H3G6Z1_PHYRM (Protein kinase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6Z1_PHYRM)

HSP 1 Score: 139 bits (349), Expect = 3.270e-38
Identity = 64/101 (63.37%), Postives = 79/101 (78.22%), Query Frame = 1
Query:   16 KVFRGTSNAGPPLDVWSVGVILFALLCGHLPFEGTDLLGHSRPRDSVIRKRIMQCRYKTDESVSPEAKARNGGGERDLLRRMLKLDPTERTSIPEIFNHCW 318
            +VFRGTSNAGPPLDVWS+G+ILFA++CG LPFEG DLLG +RPR++VIR RIM+C++K DE +SP           DL+ RMLK DP ER +IPEIF+H W
Sbjct:  186 EVFRGTSNAGPPLDVWSLGIILFAIVCGRLPFEGPDLLGTNRPRENVIRNRIMRCQFKLDEDLSPALT--------DLVIRMLKPDPNERATIPEIFSHPW 278          
BLAST of mRNA_C-tenellus_contig835.1.1 vs. uniprot
Match: A0A485KMH0_9STRA (Aste57867_9197 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMH0_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.740e-38
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 1
Query:   16 KVFRGTSNAGPPLDVWSVGVILFALLCGHLPFEGTDLLGHSRPRDSVIRKRIMQCRYKTDESVSPEAKARNGGGERDLLRRMLKLDPTERTSIPEIFNHCWLRIRNITS 342
            +VFRGTSNAGPPLDVWS+GVILFA++CG LPFEG+DL G +RPR++VIR RIM+ +YK D+ ++PE          DL++RMLKLDP ER +IPEIF+H W+R +  TS
Sbjct:  286 EVFRGTSNAGPPLDVWSLGVILFAIVCGRLPFEGSDLKGSNRPRENVIRNRIMRAQYKLDDHLTPEVT--------DLIQRMLKLDPIERATIPEIFSHPWIRAKAGTS 386          
BLAST of mRNA_C-tenellus_contig835.1.1 vs. uniprot
Match: A0A662XLY9_9STRA (Protein kinase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLY9_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.120e-37
Identity = 65/103 (63.11%), Postives = 82/103 (79.61%), Query Frame = 1
Query:   16 KVFRGTSNAGPPLDVWSVGVILFALLCGHLPFEGTDLLGHSRPRDSVIRKRIMQCRYKTDESVSPEAKARNGGGERDLLRRMLKLDPTERTSIPEIFNHCWLR 324
            +VFRGTSNAGPPLDVWS+GVILFA++CG LPFEG+DL G +RPR++VIR RIM+C++K DE +SP           DLL +MLK DP+ER +IPEIF+H W+R
Sbjct:   50 EVFRGTSNAGPPLDVWSLGVILFAIVCGRLPFEGSDLQGTNRPRENVIRNRIMRCQFKLDEGLSPALT--------DLLLKMLKPDPSERATIPEIFSHPWVR 144          
BLAST of mRNA_C-tenellus_contig835.1.1 vs. uniprot
Match: T0PYH2_SAPDV (CAMK/CAMKL protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PYH2_SAPDV)

HSP 1 Score: 143 bits (361), Expect = 1.370e-37
Identity = 67/103 (65.05%), Postives = 82/103 (79.61%), Query Frame = 1
Query:   16 KVFRGTSNAGPPLDVWSVGVILFALLCGHLPFEGTDLLGHSRPRDSVIRKRIMQCRYKTDESVSPEAKARNGGGERDLLRRMLKLDPTERTSIPEIFNHCWLR 324
            +VFRGTSNAGPPLDVWS+GVILFA++CG LPFEGTDL G +RPR++VIR RIM+ +YK DE++SPE          DL+ RML+ DP ER +IPEIF+H WLR
Sbjct:  285 EVFRGTSNAGPPLDVWSLGVILFAIVCGRLPFEGTDLKGTNRPRENVIRNRIMRAQYKLDETLSPEVT--------DLITRMLQPDPVERATIPEIFSHPWLR 379          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig835.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JP74_9PHAE2.110e-4973.33Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LST6_ECTSI1.840e-4874.34Serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
A0A7S3M4V4_9STRA3.620e-4163.11Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A836CH35_9STRA1.820e-3960.18Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A024GBW1_9STRA1.890e-3862.73Protein kinase domain-containing protein n=3 Tax=A... [more]
A0A1V9ZXR3_9STRA2.690e-3861.61Kinase n=1 Tax=Thraustotheca clavata TaxID=74557 R... [more]
H3G6Z1_PHYRM3.270e-3863.37Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A485KMH0_9STRA3.740e-3861.47Aste57867_9197 protein n=1 Tax=Aphanomyces stellat... [more]
A0A662XLY9_9STRA1.120e-3763.11Protein kinase domain-containing protein n=1 Tax=N... [more]
T0PYH2_SAPDV1.370e-3765.05CAMK/CAMKL protein kinase n=2 Tax=Saprolegnia TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig835contigC-tenellus_contig835:1129..2028 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog653948.CCA23247
PFAMsKHA,Pkinase
Model size369
Max annot lvl2759|Eukaryota
KEGG koko:K19008
KEGG Pathwayko04922,map04922
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.42e-40
EggNOG OGsKOG0583@1|root,KOG0583@2759|Eukaryota
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
Cds size369
COG categoryG
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790100.3361535-CDS-C-tenellus_contig835:1128..13711680790100.3361535-CDS-C-tenellus_contig835:1128..1371Choristocarpus tenellus KU2346CDSC-tenellus_contig835 1129..1371 +
1680790100.3495274-CDS-C-tenellus_contig835:1902..20281680790100.3495274-CDS-C-tenellus_contig835:1902..2028Choristocarpus tenellus KU2346CDSC-tenellus_contig835 1903..2028 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig835.1.1prot_C-tenellus_contig835.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig835 1129..2028 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig835.1.1

>prot_C-tenellus_contig835.1.1 ID=prot_C-tenellus_contig835.1.1|Name=mRNA_C-tenellus_contig835.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=123bp
MHPCEKVFRGTSNAGPPLDVWSVGVILFALLCGHLPFEGTDLLGHSRPRD
SVIRKRIMQCRYKTDESVSPEAKARNGGGERDLLRRMLKLDPTERTSIPE
IFNHCWLRIRNITSLDLQVGVTE
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mRNA from alignment at C-tenellus_contig835:1129..2028+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig835.1.1 ID=mRNA_C-tenellus_contig835.1.1|Name=mRNA_C-tenellus_contig835.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=900bp|location=Sequence derived from alignment at C-tenellus_contig835:1129..2028+ (Choristocarpus tenellus KU2346)
ATGCACCCCTGCGAGAAGGTGTTTCGGGGTACGTCAAACGCTGGACCCCC ACTCGATGTCTGGTCGGTGGGTGTGATACTGTTTGCTTTGCTTTGCGGCC ACCTCCCCTTTGAGGGGACTGACCTACTCGGCCACAGTCGACCTCGGGAC AGCGTGATCCGGAAACGAATAATGCAGTGCCGCTACAAGACTGATGAGTC TGTCTCCCCTGAGGCGAAGGCAAGAAACGGAGGGGGAGAGAGGGTTGTAC TGCAGGGGGAGAGAGGGTTGTACTGCAGGGGCCGAAGGAATGAGAACTTG CCGTGGGGAATGTATGGGGCATGTAGGAAAAGGTCTTTGATTCAGCGGGA GGGCTTGGGACCTACATTCGCTGCCACGTTTTTCCAGATGCAGAATCATG GGTTCTTACGGATGAAACCGTCACCCGGGGTCGGATGCATATGTTTCTAG TGCGCATTGATGCACGTTCCATCTGATCAGATGCTTGTTTTTTAAAAGAA TGGTGCCCTGTCTCCTTTGGCAAAGTACATGGACCAGTCGGCGGCGTAAG GATAGAAAATTAGGCAATAGCGATAGTGGTTCGTTTCTTCCGACGCCAAA ATGTCCCTGCCAGCCAAACTGACCAATCACTTCCAACTCTTGCTCCTCGC CTTGTTAAAGAGCATTTCTTCCATCGGTCCCTCTCAGTTGCCCAGTTGCC CAGTTGCCCAGCTGCCCCTCCGTGGTAACACTCAAGCCGTGTGGTCATGT GCCGCCCCTGCGTTGACCACACAGGACCTTCTTCGGAGGATGCTTAAGCT GGATCCCACGGAAAGAACTTCTATTCCAGAGATTTTCAACCATTGCTGGT TGCGAATCAGGAACATCACTAGCCTGGACCTCCAGGTAGGTGTCACTGAG
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Coding sequence (CDS) from alignment at C-tenellus_contig835:1129..2028+

>mRNA_C-tenellus_contig835.1.1 ID=mRNA_C-tenellus_contig835.1.1|Name=mRNA_C-tenellus_contig835.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=369bp|location=Sequence derived from alignment at C-tenellus_contig835:1129..2028+ (Choristocarpus tenellus KU2346)
ATGCACCCCTGCGAGAAGGTGTTTCGGGGTACGTCAAACGCTGGACCCCC
ACTCGATGTCTGGTCGGTGGGTGTGATACTGTTTGCTTTGCTTTGCGGCC
ACCTCCCCTTTGAGGGGACTGACCTACTCGGCCACAGTCGACCTCGGGAC
AGCGTGATCCGGAAACGAATAATGCAGTGCCGCTACAAGACTGATGAGTC
TGTCTCCCCTGAGGCGAAGGCAAGAAACGGAGGGGGAGAGAGGGACCTTC
TTCGGAGGATGCTTAAGCTGGATCCCACGGAAAGAACTTCTATTCCAGAG
ATTTTCAACCATTGCTGGTTGCGAATCAGGAACATCACTAGCCTGGACCT
CCAGGTAGGTGTCACTGAG
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