mRNA_C-tenellus_contig8346.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8346.3.1 vs. uniprot
Match: A0A6H5KT04_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT04_9PHAE) HSP 1 Score: 252 bits (644), Expect = 2.920e-75 Identity = 175/355 (49.30%), Postives = 214/355 (60.28%), Query Frame = 1 Query: 1 LRAINRGVRRKAITIALLMAFTFPGVSVPRWSGG--VGGEGATGALNSEPIIETVLLTPKKSTPTAEKVALQKRGTTDRQTTARSASLLTGAGSGSTIRASGNGAAEGQLRGMHS-SRTAFVMP---REGGVVGIGQWQDEVSSRGMVETG------RRAVVGGRNVVVESRASDPLVQLQSLLRSVIGSAREIADEFGGHIVGAKRDVLIILLANALIIPVCKRVKLSPILGFLASGILLGPNGLSLLTDVKAMEVLGEMGIVFFLFEMGLELSLSRLKAMKRDVFGLGLSQFLITSAGVAGVCSLAXXXXXXXXXXXXXXALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 1029 LRA R ++A+T+AL FP +S PR S G GG A GA ++ P +E VL P +E A ++ T +TG +G + + G + SR AFV P EG G SS+G + RRA R VE+ + L+S+ + REIA +FGGHI GAKRDVL+IL+ANALIIPVCKRV LSP+LGFLA+G+ LGPN LS+++DVKA+EVLGEMGIVFFLFEMGLELS++RL AMKRDVFGLGL+ F +++A VAG C LA ALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ Sbjct: 153 LRAAKRVASKRALTVALAFTLAFPSLSAPRISPGGTEGGLAAGGAGSAHPAVELVL-------PFSENAAAAEQATPV---------SVTGGATGVREQHQQHXGXXXXXAGRTAASRAAFVGPWGKEEGDRGGGXXXXXRSSSKGGLSAAAVRAPSRRAGGKKRGKAVENDGTKEA--LRSMASKAGENGREIAQDFGGHIQGAKRDVLVILMANALIIPVCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGMSAAAVAGACYLAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 489
BLAST of mRNA_C-tenellus_contig8346.3.1 vs. uniprot
Match: D8LS49_ECTSI (Similarity to sodium/hydrogen exchanger and potassium exchanger n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS49_ECTSI) HSP 1 Score: 235 bits (599), Expect = 4.990e-66 Identity = 143/239 (59.83%), Postives = 167/239 (69.87%), Query Frame = 1 Query: 337 SSRTAFVMP---REGGVVGIGQWQDEVSSRGMVETGRRAV---VGG--RNVVVESRASDPLVQLQSLLRSVIGSAREIADEFGGHIVGAKRDVLIILLANALIIPVCKRVKLSPILGFLASGILLGPNGLSLLTDVKAMEVLGEMGIVFFLFEMGLELSLSRLKAMKRDVFGLGLSQFLITSAGVAGVCSLAXXXXXXXXXXXXXXALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 1029 +SR AFV P EG G Q S G+ RA VGG R VE + ++ + V G REIA++F GHI GAKRDVL+IL+ANALIIPVCKRV LSP+LGFLA+G+ LGPN LS+++DVKA+EVLGEMGIVFFLFEMGLELS++RL AMKRDVFGLGL+ F +++A VAG C +A ALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ Sbjct: 221 ASRAAFVGPWGKEEGDRGGDAQGARSSSKGGLSAAAVRAPSKRVGGTKRGKAVEKDGTKEALRSMATKAGVNG--REIAEDFWGHIQGAKRDVLVILMANALIIPVCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGACYVAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 457
BLAST of mRNA_C-tenellus_contig8346.3.1 vs. uniprot
Match: A0A835Z5B4_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B4_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.860e-48 Identity = 98/142 (69.01%), Postives = 111/142 (78.17%), Query Frame = 1 Query: 604 LANALIIPVCKRVKLSPILGFLASGILLGPNGLSLLTDVKAMEVLGEMGIVFFLFEMGLELSLSRLKAMKRDVFGLGLSQFLITSAGVAGVCSLAXXXXXXXXXXXXXXALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 1029 +A AL+IP+CKR SPILGFLA+G LLGPNGL L+ DVKA EVLGE+GIVFFLFEMGLELS+ RL AMK+DVFGLGL+QF +T+ GVA V S A ALSSSAFVLQLL+DRDD+GTRYGRA FGILL Q Sbjct: 1 MAVALVIPLCKRAGQSPILGFLATGTLLGPNGLRLIADVKATEVLGELGIVFFLFEMGLELSIQRLAAMKKDVFGLGLAQFFLTALGVAAVASRAGLGAPALVVIGGGIALSSSAFVLQLLKDRDDMGTRYGRASFGILLLQ 142
BLAST of mRNA_C-tenellus_contig8346.3.1 vs. uniprot
Match: A0A7S2WPP6_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WPP6_9STRA) HSP 1 Score: 181 bits (458), Expect = 3.860e-47 Identity = 101/196 (51.53%), Postives = 135/196 (68.88%), Query Frame = 1 Query: 451 GGRNVVVESRASDPLVQLQSLLRSVIGSA---REIADEFGGHIVGAKRDVLIILLANALIIPVCKRVKLSPILGFLASGILLGPNGLSLLTDVKAMEVLGEMGIVFFLFEMGLELSLSRLKAMKRDVFGLGLSQFLITSAGVAGVCSLAXXXXXXXXXXXXXXALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 1029 GG + +++ + Q S+ ++ G+ RE D+ ++ G K D LIILLA ALI P+C+R+K SPILGFLASG+LLGPNG+ L++ + E L E+GIVFFLFEMG+ELSL RLK+M+RDVFGLG+SQFL ++ +A V SL ALSSSAFVLQLL+D++ L TR+G+A FG+LLFQ Sbjct: 183 GGNTAISKNKQTSNQAQ-SSIAETIEGTTQTFREALDDLYHYMKGPKSDTLIILLATALITPLCQRIKTSPILGFLASGMLLGPNGMGLISGIHTTETLAELGIVFFLFEMGIELSLDRLKSMRRDVFGLGMSQFLGSAIAIAAVGSLFGIPANALVVLGGGLALSSSAFVLQLLKDKNALATRFGKASFGVLLFQ 377
BLAST of mRNA_C-tenellus_contig8346.3.1 vs. uniprot
Match: A0A7S2MX89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MX89_9STRA) HSP 1 Score: 170 bits (431), Expect = 6.870e-46 Identity = 91/176 (51.70%), Postives = 119/176 (67.61%), Query Frame = 1 Query: 502 LQSLLRSVIGSAREIADEFGGHIVGAKRDVLIILLANALIIPVCKRVKLSPILGFLASGILLGPNGLSLLTDVKAMEVLGEMGIVFFLFEMGLELSLSRLKAMKRDVFGLGLSQFLITSAGVAGVCSLAXXXXXXXXXXXXXXALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 1029 +Q+ + +E + ++ G K D L++LLA ALI P+CK + SPILGFLA+G+LLGPNG L++ + E L E+GIVFFLFEMG+ELS +RL +MK+DVFGLGLSQFL T+ + GV L ALSSSAFVLQLL+D+D L TR+G+A FG+LLFQ Sbjct: 190 IQTASEQTSRTLQEAVQDLKKYMEGPKSDTLLLLLATALITPLCKSIGTSPILGFLAAGMLLGPNGFGLISGIHTTETLAELGIVFFLFEMGIELSFNRLLSMKKDVFGLGLSQFLTTAITIGGVGRLCGLPGNAGVVLGGGLALSSSAFVLQLLKDKDQLATRFGKASFGVLLFQ 365
BLAST of mRNA_C-tenellus_contig8346.3.1 vs. uniprot
Match: A0A7S2XSK7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSK7_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.240e-45 Identity = 111/251 (44.22%), Postives = 151/251 (60.16%), Query Frame = 1 Query: 283 TIRASGNGAAEGQLRGMHSSRTAFVMPREGGVVGIG--QWQDEVSSRGMVETGRRAVVGGRNVVVESRASDPLVQLQSLLRSVIGSAREIADEFGGHIVGAKRDVLIILLANALIIPVCKRVKLSPILGFLASGILLGPNGLSLLTDVKAMEVLGEMGIVFFLFEMGLELSLSRLKAMKRDVFGLGLSQFLITSAGVAGVCSLAXXXXXXXXXXXXXXALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 1029 T+R++G+G R+ V GGV G +W + +S+ V A G + V++ A + V S + + R+ + + G K D L++LLA ALI P+C+R+ SPILGFLASG+LLGPNG L++ + E L E+GIVFFLFEMG+ELS RLK+MK+DVFGLG+SQF+ T+ +AGV SL ALSSSAFVLQLL+D+D L TR+G+A FG+LLFQ Sbjct: 215 TVRSTGSG---------EGVRSKLVSKTGGGVSQAGPHKWMQKQNSQQKVTPMPMAAAGLSSKSVQTSAFEETVISASTVTKT--TLRQAFLDLFDFMKGPKSDTLLLLLATALITPLCQRLGTSPILGFLASGMLLGPNGFGLISGIHTTETLAELGIVFFLFEMGIELSFDRLKSMKKDVFGLGMSQFVCTALAIAGVGSLFGLPANALVVLGGGLALSSSAFVLQLLKDKDKLATRFGKASFGVLLFQ 454
BLAST of mRNA_C-tenellus_contig8346.3.1 vs. uniprot
Match: A0A7S4VUL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VUL3_9STRA) HSP 1 Score: 169 bits (429), Expect = 7.380e-45 Identity = 93/199 (46.73%), Postives = 126/199 (63.32%), Query Frame = 1 Query: 439 RAVVGGRNVVVESRASDPLVQ--LQSLLRSVIGSAREIADEFGGHIVGAKRDVLIILLANALIIPVCKRVKLSPILGFLASGILLGPNGLSLLTDVKAMEVLGEMGIVFFLFEMGLELSLSRLKAMKRDVFGLGLSQFLITSAGVAGVCSLAXXXXXXXXXXXXXXALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 1029 RA +N+ + + + + +Q+ + +E + ++ G K D L++LLA ALI P+CK + SPILGFLA+G+LLGPNG L++ + E L E+GIVFFLFEMG+ELS RL +MK+DVFGLGLSQF+ T+ V GV ALSSSAFVLQLL+D+D L TR+G+A FG+LLFQ Sbjct: 170 RAAAQNQNLDLRGGGTKKIAENPIQTASEKTSRTLKEAVQDLQKYMQGPKSDTLLLLLATALITPLCKSIGTSPILGFLAAGMLLGPNGFGLISGIHTTETLAELGIVFFLFEMGIELSFDRLISMKKDVFGLGLSQFITTAIAVGGVGKFCGLPGNACVVLGGGLALSSSAFVLQLLKDKDQLATRFGKASFGVLLFQ 368
BLAST of mRNA_C-tenellus_contig8346.3.1 vs. uniprot
Match: A0A4D9D2S5_9STRA (Na_H_Exchanger domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2S5_9STRA) HSP 1 Score: 162 bits (411), Expect = 9.400e-45 Identity = 83/152 (54.61%), Postives = 111/152 (73.03%), Query Frame = 1 Query: 574 GAKRDVLIILLANALIIPVCKRVKLSPILGFLASGILLGPNGLSLLTDVKAMEVLGEMGIVFFLFEMGLELSLSRLKAMKRDVFGLGLSQFLITSAGVAGVCSLAXXXXXXXXXXXXXXALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 1029 G +RD L++LL+ L++P+ R+K SPILGFL +G++LGP GLS++ D+K E L E+GIVFFLFEMGLELS+ RL +M+RDVFGLG +QF +++ + + + ALSSSAFVLQLLRD+D LGTR+GRA FG+LLFQ Sbjct: 46 GPRRDTLVLLLSTTLVVPIMTRLKTSPILGFLLTGMVLGPRGLSVVNDIKTTEALAELGIVFFLFEMGLELSVERLISMRRDVFGLGFAQFSLSAVAIFILSRMRGLPGPTSVVVGGALALSSSAFVLQLLRDKDSLGTRHGRASFGVLLFQ 197
BLAST of mRNA_C-tenellus_contig8346.3.1 vs. uniprot
Match: A0A7S3L4P7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4P7_9STRA) HSP 1 Score: 174 bits (441), Expect = 9.640e-45 Identity = 94/176 (53.41%), Postives = 123/176 (69.89%), Query Frame = 1 Query: 502 LQSLLRSVIGSAREIADEFGGHIVGAKRDVLIILLANALIIPVCKRVKLSPILGFLASGILLGPNGLSLLTDVKAMEVLGEMGIVFFLFEMGLELSLSRLKAMKRDVFGLGLSQFLITSAGVAGVCSLAXXXXXXXXXXXXXXALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 1029 L+++ + + ++ A + G ++ G K D L++LLA ALI P+CKR+ SPILGFLASG+LLGPNG L++ + E L E+GIVFFLFEMG+ELS+ RL M++DVFGLGL QF +T+ VAG SL ALSSSAFVLQLL+D+D L TR+G+A FGILLFQ Sbjct: 205 LETVEKVTSRTLKDAAMDLGEYMTGPKSDTLLLLLATALITPICKRLGTSPILGFLASGMLLGPNGCGLISGIHTTETLAELGIVFFLFEMGIELSVERLMQMRKDVFGLGLGQFGLTALAVAGFGSLFGLPGNALVVLGGGLALSSSAFVLQLLKDKDQLATRFGKASFGILLFQ 380
BLAST of mRNA_C-tenellus_contig8346.3.1 vs. uniprot
Match: A0A7S2A6S9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6S9_TRICV) HSP 1 Score: 163 bits (413), Expect = 1.240e-44 Identity = 93/187 (49.73%), Postives = 123/187 (65.78%), Query Frame = 1 Query: 472 ESRASDPLVQLQSLLRSVIGSAREIADEFGGHIVGAKRDVLIILLANALIIPVCKRVKLSPILGFLASGILLGPNGLSLLTDVKAMEVLGEMGIVFFLFEMGLELSLSRLKAMKRDVFGLGLSQFLITSAGVAGVCSLAXXXXXXXXXXXXXX-ALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQ 1029 ES D +V+ ++ ++ +E + ++ G K D L++LLA AL+ P+CK + SPILGFLA+G +LGPN L ++ + E L E+GIVFFLFEMG+ELS RL +MK+DVFGLGLSQFL T+ VA V +A ALSSSAFVLQLL+D+D L TR+GRA FG+LLFQ Sbjct: 70 ESVVFDNIVEAETRVQKTF---QEALADLAAYMSGPKSDTLLLLLATALVTPLCKSLGTSPILGFLAAGTILGPNALGWISGIHTTETLAELGIVFFLFEMGIELSFERLLSMKKDVFGLGLSQFLTTAVAVAAVGRVAFGLPANALVVLGGGLALSSSAFVLQLLKDKDQLATRFGRASFGVLLFQ 253 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8346.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8346.3.1 >prot_C-tenellus_contig8346.3.1 ID=prot_C-tenellus_contig8346.3.1|Name=mRNA_C-tenellus_contig8346.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=353bp LRAINRGVRRKAITIALLMAFTFPGVSVPRWSGGVGGEGATGALNSEPIIback to top mRNA from alignment at C-tenellus_contig8346:3704..5574+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8346.3.1 ID=mRNA_C-tenellus_contig8346.3.1|Name=mRNA_C-tenellus_contig8346.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1871bp|location=Sequence derived from alignment at C-tenellus_contig8346:3704..5574+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8346:3704..5574+ >mRNA_C-tenellus_contig8346.3.1 ID=mRNA_C-tenellus_contig8346.3.1|Name=mRNA_C-tenellus_contig8346.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1059bp|location=Sequence derived from alignment at C-tenellus_contig8346:3704..5574+ (Choristocarpus tenellus KU2346)back to top |