mRNA_C-tenellus_contig8343.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8343.1.2 vs. uniprot
Match: D7FQ44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ44_ECTSI) HSP 1 Score: 146 bits (369), Expect = 1.160e-43 Identity = 66/86 (76.74%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 16 FAQVPGIAEGARKRLADGEGDDCVTNTYQLVGKFLSLRGPDIDGEKVDCVEHCDKFWYWLQSKGINSHRSGIVNAIAEKVNTWIPG 273 +VPGIA + LADGEGDD VTNTYQL+GKFL+LRGPD +VD VEHCDKFWYWLQ+KGINS+RSGIVNAIAEKVNTWIPG Sbjct: 30 LTEVPGIAARGAEILADGEGDDKVTNTYQLIGKFLALRGPDKTDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWIPG 115
BLAST of mRNA_C-tenellus_contig8343.1.2 vs. uniprot
Match: A0A835Z4N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N7_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.140e-36 Identity = 56/91 (61.54%), Postives = 68/91 (74.73%), Query Frame = 1 Query: 1 PTNFIFAQVPGIAEGARKRLADGEGDDCVTNTYQLVGKFLSLRGPDIDGEKVDCVEHCDKFWYWLQSKGINSHRSGIVNAIAEKVNTWIPG 273 P +VPGI A K+LA GEG + V NTYQL+GKFLSL+G D G+ + +EHCD+FWYWL+ GI+S+RSGIVNAIAEK NTWIPG Sbjct: 26 PITGELTEVPGIGPAAVKKLAAGEGSNKVANTYQLIGKFLSLKGGDDSGKTIQTIEHCDRFWYWLKEMGISSYRSGIVNAIAEKCNTWIPG 116
BLAST of mRNA_C-tenellus_contig8343.1.2 vs. uniprot
Match: K0QZN8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZN8_THAOC) HSP 1 Score: 128 bits (321), Expect = 2.580e-36 Identity = 54/86 (62.79%), Postives = 67/86 (77.91%), Query Frame = 1 Query: 16 FAQVPGIAEGARKRLADGEGDDCVTNTYQLVGKFLSLRGPDIDGEKVDCVEHCDKFWYWLQSKGINSHRSGIVNAIAEKVNTWIPG 273 +VPGI A K+LA+GE D+C+TNTYQL+GKFL L+GPD D KV+ +EHC+KFWYWLQ K I++HRS IV AIA KVN +PG Sbjct: 30 ITEVPGIGPAAAKKLAEGEHDECITNTYQLIGKFLMLKGPDTDDNKVESMEHCEKFWYWLQDKQISAHRSAIVKAIAMKVNGLLPG 115
BLAST of mRNA_C-tenellus_contig8343.1.2 vs. uniprot
Match: A0A7S2V4V0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V0_9STRA) HSP 1 Score: 125 bits (313), Expect = 4.930e-35 Identity = 53/91 (58.24%), Postives = 70/91 (76.92%), Query Frame = 1 Query: 1 PTNFIFAQVPGIAEGARKRLADGEGDDCVTNTYQLVGKFLSLRGPDIDGEKVDCVEHCDKFWYWLQSKGINSHRSGIVNAIAEKVNTWIPG 273 P QVPGI + A LA + D+ +TN++QL+GKFL ++GPD + +VDCV HC+KFWY+L+SKG+NSHRSGIV+AIAEK+NT IPG Sbjct: 24 PITGDITQVPGIGKAAAAALASADDDEPITNSFQLIGKFLLMKGPDTEEGEVDCVMHCNKFWYYLKSKGVNSHRSGIVHAIAEKINTMIPG 114
BLAST of mRNA_C-tenellus_contig8343.1.2 vs. uniprot
Match: B8CF00_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CF00_THAPS) HSP 1 Score: 122 bits (307), Expect = 2.160e-34 Identity = 52/86 (60.47%), Postives = 67/86 (77.91%), Query Frame = 1 Query: 16 FAQVPGIAEGARKRLADGEGDDCVTNTYQLVGKFLSLRGPDIDGEKVDCVEHCDKFWYWLQSKGINSHRSGIVNAIAEKVNTWIPG 273 +VPGI A K+LA+ EG++ +TNTYQL+GKFL L+GPD D KV+ EHC+KFWYWLQ+ GI++HRS IV AIA+KVN +PG Sbjct: 13 ITEVPGIGPAAAKKLANVEGEEGITNTYQLIGKFLMLKGPDTDTNKVESFEHCEKFWYWLQAMGISAHRSAIVKAIAQKVNGLLPG 98
BLAST of mRNA_C-tenellus_contig8343.1.2 vs. uniprot
Match: A0A7S2R0A3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0A3_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.390e-33 Identity = 55/98 (56.12%), Postives = 71/98 (72.45%), Query Frame = 1 Query: 4 TNFIFAQ-------VPGIAEGARKRLADGEGD-DCVTNTYQLVGKFLSLRGPDIDGEKVDCVEHCDKFWYWLQSKGINSHRSGIVNAIAEKVNTWIPG 273 T+F+ +Q VPGI A++ LA G+ + D +TNT+QL+GKFL L+GPD D K+DC+EH +KFWYWL+ KGI SHRS IV AI EK+NT IPG Sbjct: 20 TDFLRSQITGDVTEVPGIGPAAKRALAGGDDESDRITNTFQLIGKFLMLKGPDEDDMKIDCMEHMEKFWYWLKQKGIKSHRSAIVKAIGEKINTMIPG 117
BLAST of mRNA_C-tenellus_contig8343.1.2 vs. uniprot
Match: A0A6U3Z2B1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Z2B1_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.700e-32 Identity = 57/90 (63.33%), Postives = 68/90 (75.56%), Query Frame = 1 Query: 16 FAQVPGIAEGARKRLA---DGEGD-DCVTNTYQLVGKFLSLRGPDIDGEKVDCVEHCDKFWYWLQSKGINSHRSGIVNAIAEKVNTWIPG 273 VPGI A K+L DGE + D VTNTYQL+GKFL L+GPD DG KV+ VEH +KFW++L+ KGI+SHRSGIV AIAEKVNT +PG Sbjct: 29 LTDVPGIGPAAAKKLGQIGDGETEFDRVTNTYQLIGKFLMLKGPDEDGNKVESVEHMEKFWWYLKQKGISSHRSGIVRAIAEKVNTMLPG 118
BLAST of mRNA_C-tenellus_contig8343.1.2 vs. uniprot
Match: A0A7S2MQ62_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MQ62_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.680e-30 Identity = 55/90 (61.11%), Postives = 67/90 (74.44%), Query Frame = 1 Query: 16 FAQVPGIAEGARKRLA---DGEGD-DCVTNTYQLVGKFLSLRGPDIDGEKVDCVEHCDKFWYWLQSKGINSHRSGIVNAIAEKVNTWIPG 273 VPGI A ++L D E D D +TNTYQL+GKFL L+GPD DG KV+ +EH +KFW++L+ KGI+SHRSGIV AIAEKVNT IPG Sbjct: 38 LTDVPGIGPAAARKLGEIGDEEKDSDRITNTYQLIGKFLMLKGPDEDGHKVESMEHMEKFWWFLKEKGISSHRSGIVRAIAEKVNTMIPG 127
BLAST of mRNA_C-tenellus_contig8343.1.2 vs. uniprot
Match: D8LR09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR09_ECTSI) HSP 1 Score: 114 bits (284), Expect = 2.230e-30 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 1 Query: 1 PTNFIFAQVPGIAEGARKRLADGEGDDCVTNTYQLVGKFLSLRGPDIDGEKVDCVEHCDKFWYWLQSKGINSHRSGIVNAIAEKVNTWIPG 273 P + ++VPGI A L +GEGDDCV NT+QL+GKFL LRG DG+ +DCVEHCDKF++WL+SK ++++R IV IA K N PG Sbjct: 52 PITGLLSEVPGIGPTAVGLLGEGEGDDCVKNTFQLIGKFLVLRGSKEDGQLIDCVEHCDKFYWWLKSKAVDNYRGRIVQCIAVKTNLSYPG 142
BLAST of mRNA_C-tenellus_contig8343.1.2 vs. uniprot
Match: A0A1V9Z038_9STRA (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z038_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.780e-30 Identity = 53/93 (56.99%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 1 PTNFIFAQVPGIAEGARKRLADGEG-DDCVTNTYQLVGKFLSL-RGPDIDGEKVDCVEHCDKFWYWLQSKGINSHRSGIVNAIAEKVNTWIPG 273 P + +VPGI A K+LA G+ D VTNT+QL+GKFL L R D E +DC HCD FW+WL+SKG+ S+RSGIV AIAEKVNT +PG Sbjct: 25 PLTGVLTEVPGIGPAAAKKLASGDDIADQVTNTFQLIGKFLMLKRNDDETDEPIDCPTHCDAFWHWLKSKGVTSYRSGIVMAIAEKVNTMVPG 117 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8343.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8343.1.2 >prot_C-tenellus_contig8343.1.2 ID=prot_C-tenellus_contig8343.1.2|Name=mRNA_C-tenellus_contig8343.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=91bp PTNFIFAQVPGIAEGARKRLADGEGDDCVTNTYQLVGKFLSLRGPDIDGEback to top mRNA from alignment at C-tenellus_contig8343:69..1801- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8343.1.2 ID=mRNA_C-tenellus_contig8343.1.2|Name=mRNA_C-tenellus_contig8343.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1733bp|location=Sequence derived from alignment at C-tenellus_contig8343:69..1801- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8343:69..1801- >mRNA_C-tenellus_contig8343.1.2 ID=mRNA_C-tenellus_contig8343.1.2|Name=mRNA_C-tenellus_contig8343.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=273bp|location=Sequence derived from alignment at C-tenellus_contig8343:69..1801- (Choristocarpus tenellus KU2346)back to top |