mRNA_C-tenellus_contig834.6.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig834.6.1
Unique NamemRNA_C-tenellus_contig834.6.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: D7G6E6_ECTSI (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E6_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 9.160e-111
Identity = 173/237 (73.00%), Postives = 202/237 (85.23%), Query Frame = 1
Query:    1 MAVIVSAQLVNLTDKSELKLVEAVASLLPSGKAEFTKACSDLIAEANAPELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGDEGKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAPIVSFTEQ 711
            MA+ VSAQLVNL+ K+ELKLVEAVA  +PSG+A+F+KAC+ LI  ANAP+LIRK+L QRN IL M +T+DVEGCFGILFSLL KTDNPK A+PALSMEI+  +LE VD  A LRLKLVTNLYNMLPV +A QL+VL+ +IRYA  AKL  MLS+FF   D+WIKGW+LSV DQRRLYLLIS+TLG EGK VESQKFLMKYL T+DGA+  EL++VKAAAV+GCIGAVK+PIVSFTEQ
Sbjct:    1 MAMAVSAQLVNLSAKAELKLVEAVAKAMPSGQAQFSKACTALITNANAPDLIRKVLEQRNVILEMSKTDDVEGCFGILFSLLFKTDNPKAAVPALSMEIATKVLEKVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYAKEAKLVAMLSSFFAGVDDWIKGWELSVADQRRLYLLISDTLGSEGKAVESQKFLMKYLATYDGATTAELAEVKAAAVRGCIGAVKSPIVSFTEQ 237          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A835Z3J7_9STRA (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J7_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.740e-59
Identity = 115/238 (48.32%), Postives = 154/238 (64.71%), Query Frame = 1
Query:   13 VSAQLVNLTDKSELKLVEAVASLL--PSGKAEFTKACSDLIAEANAPELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGDEGKDVESQKFLMKYLVTFDG---ASAEELSQVKAAAVKGCIGAVKAPIVSFTEQ 711
            VSAQLVNL  ++ +KLV AVA+ L  P+ +  F   CS LI EANA ELIRKLLG R  +L  ++ E +EGCF +LF LLH+  +P   MP L  E++  +L+  D  A LRL+L T+LYNMLP  ++ Q +VL+++I+YA    L  ML++FF   +  +  W LS+ DQRRL+LL+++ L        SQ FLMKYLVTFD     S     +V+AAA +G +GAVKAPIVSF E 
Sbjct:    3 VSAQLVNLGPEAPVKLVGAVAAALKDPAEQNAFRTECSKLINEANAAELIRKLLGHRQVMLSFDKEETIEGCFAVLFHLLHRLPDPAKNMPVLVPEVTAALLDSED-KAGLRLRLATSLYNMLPAKTSVQFEVLLAIIKYAASTGLLAMLNSFFASMESMLAAWQLSLKDQRRLFLLVADVLSKASDAAGSQVFLMKYLVTFDNDAEGSKTSAKEVRAAAARGAVGAVKAPIVSFMEH 239          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A8K0H384_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0H384_9ROSA)

HSP 1 Score: 87.8 bits (216), Expect = 1.770e-16
Identity = 60/182 (32.97%), Postives = 98/182 (53.85%), Query Frame = 1
Query:  148 ELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGD-EGKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 690
            +L   +L     I      +D+E  F ++ +++ K+++P  A+    + IS  I +  +   ALRLK++ NLYN+L     S+  V +  +  A   K+T  +   FT  D ++K W++ + DQR+L+L IS+ L + +    +S KFL KYL+TF G  A  LS+ K  AV   +  VKAP
Sbjct:   55 DLASLMLTSAEVIFSKVAEKDLECIFTVICNVVTKSESPDEALEMAKL-ISAKITQQPNDKPALRLKILFNLYNLLEN-PYSRFYVYMKTLNLAIDGKVTEHIIPSFTKIDSFLKEWNIGIVDQRKLFLAISDVLKENKSAPKDSFKFLTKYLMTFSGDDAHNLSEAKEEAVHTIVEFVKAP 234          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A7S2UX52_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX52_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 9.980e-16
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 1
Query:  424 YAHVAKLTGMLSTFFTC-ADEWIKGWDLSVHDQRRLYLLISETLGDEGKDVESQKFLMKYLVTF-DGASAEELSQVKAAAVKGCIGAVKAPIVSFTE 708
            +A  +   G+LS+FF     EW++ +DL   DQR LYLL++++L       E+QKFL+KYL T+ D A A+ LS VK  A +G +GA++ PIVSFTE
Sbjct:    1 FAMASSQNGLLSSFFIKQGQEWVELFDLETGDQRTLYLLMADSLVQSQHSHEAQKFLLKYLATYEDEADAKALSAVKEHAARGAVGAIRFPIVSFTE 97          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: UPI001CB957E6 (eukaryotic translation initiation factor 3 subunit M-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB957E6)

HSP 1 Score: 84.0 bits (206), Expect = 4.030e-15
Identity = 58/184 (31.52%), Postives = 93/184 (50.54%), Query Frame = 1
Query:  148 ELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNML--PVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGD-EGKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 690
            +L   ++   + ++     +D+E  F ++ +L+ K ++    +    + +S  I++      ALRLK++ NLYN+L  P C   +  V +  ++ A   K+T  +   F   D ++K WDL VHDQR LYL IS  L + +    E  KFL KYL TF G  A  + + K  A    I  +KAP
Sbjct:   55 DLASLMITSADLLVSKASDKDLECIFTVICNLVKKPESTDEILEMAKL-LSTKIVQQPTDKPALRLKILFNLYNLLENPYC---RFYVYMGALKLAIDGKVTEHIIPSFKKIDSFLKEWDLGVHDQRELYLAISNVLKEHKSSPKEILKFLSKYLATFSGEDAHVMEEAKEEAAHAIIEFIKAP 234          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: D7SVA4_VITVI (Eukaryotic translation initiation factor 3 subunit M n=3 Tax=Vitis TaxID=3603 RepID=D7SVA4_VITVI)

HSP 1 Score: 83.2 bits (204), Expect = 7.510e-15
Identity = 61/184 (33.15%), Postives = 98/184 (53.26%), Query Frame = 1
Query:  148 ELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGDE---GKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 690
            +L   +L   + +      +D+E  F ++ +L+ K+++P  A+  ++  IS  I +  +  AALRLK++ NLYN+L     S+  V +  +  A   K+T  +   F   D ++K W++ + DQR LYL IS  L +    GKD    KFL KYL TF G  A  +S+ K  AV+  +  V+AP
Sbjct:   55 DLASLMLTSADLMFSKASDKDLECIFTVICNLVTKSESPDEALE-MAKFISAKITQQPNDKAALRLKILFNLYNLLEN-PYSRFYVYMKALNLAVNGKVTEHIIPSFKMMDSFLKEWNIGILDQRALYLNISNILKENKSLGKDYF--KFLTKYLATFSGEDAYTMSEAKEEAVRTIMEFVRAP 234          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A7S3DAN4_9EUKA (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DAN4_9EUKA)

HSP 1 Score: 81.6 bits (200), Expect = 2.710e-14
Identity = 52/172 (30.23%), Postives = 91/172 (52.91%), Query Frame = 1
Query:  190 GMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAAL---RLKLVTNLYNML--PVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGDEGKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 690
            G + + ++E  F I+  +L      +VA          N++EV+  +  L   R +++ + YN +  P+  + +  V V+L+R+A   KL   ++   + AD W+K W  S  D R++YL ISE L +E +   + KFL+KYL T++G+ + EL +VK  A    + A+  P
Sbjct:   83 GNKTSGEIESMFTIVIDMLAAVKADEVAAKL------DNVIEVLSLNHNLPETRFRILVSTYNSIDEPLPLSLRARVFVALVRFAASNKLLVSIANQLSNADAWVKEWQCSAEDIRKVYLTISEALAEEKQKALAHKFLVKYLNTYEGSESAELGEVKELAADAIVEAISLP 248          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A0K9QZ29_SPIOL (Eukaryotic translation initiation factor 3 subunit M n=3 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9QZ29_SPIOL)

HSP 1 Score: 77.4 bits (189), Expect = 7.760e-13
Identity = 57/216 (26.39%), Postives = 104/216 (48.15%), Query Frame = 1
Query:   46 SELKLVEAVASLLPSGKAEFTKACSDLIAEANAPELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGD-EGKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 690
            SEL   +A   +  +  A  ++   + +A     +L   +L   + +      +D E  + ++ +L+ K++NP+  +  + + IS  I++  +    LRLK++ NLYN+L   + S+  V ++++  A   K+T  +       D ++  W+LSV DQR L+L +   L + +    ES  FL KYL TF     + + + K  A    I  VK P
Sbjct:   21 SELAWADAGTEVAQAQVARSSQEAQECMAMERWIDLASLILTSADLVFSKVAEKDTECIYTVICNLVTKSENPEEVLEIVKL-ISAKIVQHPNEKPTLRLKILFNLYNLLED-AYSRFHVYLNVLNLAASGKVTEHVIPSIKKIDSFLSEWNLSVQDQRELFLAVFNALKESKSSGKESFNFLSKYLATFSPEDEQAMIEAKEEAANAIIEFVKGP 234          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A2J6KR62_LACSA (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6KR62_LACSA)

HSP 1 Score: 75.9 bits (185), Expect = 2.650e-12
Identity = 56/182 (30.77%), Postives = 92/182 (50.55%), Query Frame = 1
Query:  148 ELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGDEGKDV-ESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 690
            +L   ++   + +      +D+E  F ++ +L+ K ++   ++  +S  IS  I +  +   +LRLK++ NLYNML       L V +  +  A   K+   +   F   D  +K W+L +HDQR+L+L IS  L +      E+ KFL KYL TF G  A ++++ K  A    I  VKAP
Sbjct:   55 DLASLMITSADLVFSKASEKDLECIFTVICNLVKKPESLDESLE-ISKLISTKIAQQPNEKPSLRLKILFNLYNMLENPYGRFL-VYMKALEVAANGKVMDHIIPSFKNTDTLLKEWNLGLHDQRQLFLAISNILKEHKSSTKENLKFLTKYLATFSGDDAHDINEAKEEAAYTIIEFVKAP 234          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A2J6LV32_LACSA (Eukaryotic translation initiation factor 3 subunit M n=4 Tax=Lactuca TaxID=4235 RepID=A0A2J6LV32_LACSA)

HSP 1 Score: 73.6 bits (179), Expect = 1.550e-11
Identity = 59/216 (27.31%), Postives = 101/216 (46.76%), Query Frame = 1
Query:   46 SELKLVEAVASLLPSGKAEFTKACSDLIAEANAPELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGD-EGKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 690
            +E+   EA   +     A       D +      +L   +L   + +      +D+E  F I+ +L+ K ++    M  ++  +S  + +  +   A+RLK++ NLYN+L     S+  V ++ ++ A   K+   +   F   D ++K W+L VHDQR L+L IS  L + +    E+ KFL KYL TF    A  + + K  A    I  VK+P
Sbjct:   21 AEMSWAEAGPEVAEPQVASLCLEAQDCMIAGRWFDLASLMLTSADLVFPKASDKDLECIFTIICNLVKKPESLD-EMLEMAKLLSTKVAQQPNDKPAIRLKILFNLYNLLEN-PYSRFYVYMNALKLAMNGKVIEHIIPSFKKIDSFLKEWNLGVHDQRELFLTISNILKEHKSSPKETFKFLTKYLATFSDEDAHTMEEAKEEAAYTIIEFVKSP 234          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7G6E6_ECTSI9.160e-11173.00Eukaryotic translation initiation factor 3 subunit... [more]
A0A835Z3J7_9STRA1.740e-5948.32Eukaryotic translation initiation factor 3 subunit... [more]
A0A8K0H384_9ROSA1.770e-1632.97Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A0A7S2UX52_9STRA9.980e-1646.39Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
UPI001CB957E64.030e-1531.52eukaryotic translation initiation factor 3 subunit... [more]
D7SVA4_VITVI7.510e-1533.15Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S3DAN4_9EUKA2.710e-1430.23Eukaryotic translation initiation factor 3 subunit... [more]
A0A0K9QZ29_SPIOL7.760e-1326.39Eukaryotic translation initiation factor 3 subunit... [more]
A0A2J6KR62_LACSA2.650e-1230.77Eukaryotic translation initiation factor 3 subunit... [more]
A0A2J6LV32_LACSA1.550e-1127.31Eukaryotic translation initiation factor 3 subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig834contigC-tenellus_contig834:13092..16048 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G6E6
Preferred nameEIF3M
PFAMsPCI
Model size711
Max annot lvl2759|Eukaryota
KEGG koko:K15030
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001732,GO:0002020,GO:0002181,GO:0002183,GO:0002790,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0005852,GO:0005856,GO:0006412,GO:0006413,GO:0006508,GO:0006518,GO:0006807,GO:0006810,GO:0006996,GO:0007030,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009306,GO:0009653,GO:0009893,GO:0009987,GO:0010033,GO:0010256,GO:0010467,GO:0010604,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0016282,GO:0016485,GO:0019222,GO:0019538,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030162,GO:0031323,GO:0031325,GO:0031369,GO:0031638,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032940,GO:0032991,GO:0033036,GO:0033993,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042886,GO:0042981,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043280,GO:0043281,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045184,GO:0045862,GO:0046677,GO:0046903,GO:0048232,GO:0048468,GO:0048515,GO:0048518,GO:0048522,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051604,GO:0051704,GO:0051716,GO:0052547,GO:0052548,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0070864,GO:0070865,GO:0070887,GO:0070993,GO:0071236,GO:0071310,GO:0071396,GO:0071541,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0080090,GO:0089720,GO:0097202,GO:0097305,GO:0097306,GO:0097307,GO:0097308,GO:1900117,GO:1900119,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901701,GO:1990904,GO:2000116,GO:2001056,GO:2001270,GO:2001272
Exons6
Evalue1.5e-111
EggNOG OGsKOG2753@1|root,KOG2753@2759|Eukaryota
Descriptiontranslation initiation factor activity
Cds size711
COG categoryJ
BRITEko00000,ko03012
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig834.6.1prot_C-tenellus_contig834.6.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig834 13092..16048 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790099.5756965-CDS-C-tenellus_contig834:13091..131871680790099.5756965-CDS-C-tenellus_contig834:13091..13187Choristocarpus tenellus KU2346CDSC-tenellus_contig834 13092..13187 +
1680790099.5892272-CDS-C-tenellus_contig834:13680..137921680790099.5892272-CDS-C-tenellus_contig834:13680..13792Choristocarpus tenellus KU2346CDSC-tenellus_contig834 13681..13792 +
1680790099.6053739-CDS-C-tenellus_contig834:14452..145941680790099.6053739-CDS-C-tenellus_contig834:14452..14594Choristocarpus tenellus KU2346CDSC-tenellus_contig834 14453..14594 +
1680790099.615897-CDS-C-tenellus_contig834:14933..150751680790099.615897-CDS-C-tenellus_contig834:14933..15075Choristocarpus tenellus KU2346CDSC-tenellus_contig834 14934..15075 +
1680790099.6288376-CDS-C-tenellus_contig834:15502..155951680790099.6288376-CDS-C-tenellus_contig834:15502..15595Choristocarpus tenellus KU2346CDSC-tenellus_contig834 15503..15595 +
1680790099.6384804-CDS-C-tenellus_contig834:15922..160481680790099.6384804-CDS-C-tenellus_contig834:15922..16048Choristocarpus tenellus KU2346CDSC-tenellus_contig834 15923..16048 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig834.6.1

>prot_C-tenellus_contig834.6.1 ID=prot_C-tenellus_contig834.6.1|Name=mRNA_C-tenellus_contig834.6.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=237bp
MAVIVSAQLVNLTDKSELKLVEAVASLLPSGKAEFTKACSDLIAEANAPE
LIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEIS
GNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTG
MLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGDEGKDVESQKFLMKY
LVTFDGASAEELSQVKAAAVKGCIGAVKAPIVSFTEQ
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mRNA from alignment at C-tenellus_contig834:13092..16048+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig834.6.1 ID=mRNA_C-tenellus_contig834.6.1|Name=mRNA_C-tenellus_contig834.6.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2957bp|location=Sequence derived from alignment at C-tenellus_contig834:13092..16048+ (Choristocarpus tenellus KU2346)
ATGGCTGTGATCGTGTCTGCTCAGCTGGTCAATCTGACCGACAAGTCGGA GCTCAAACTTGTGGAAGCGGTAGCATCATTATTGCCTTCAGGAAAGGTAA GCACAGTTTAGATCTTCTGAGTACCCGGTTACATACACAAAGTTGTGACA TCCTCTGGATGGCTGAAGGATGTTAGTCCTCTGTTGTGCACAGGATACAT TTGCCTACTTTTTGCAAGTGAATGGGGTCGGAAGAAGATGGGAGACGAGG TTTCTTCCAGTACCATACAAAATATTGATTGATGCTTTTACAACTATGAG ATCGAGACGTTGGTGTTCCTAATAGGTATCCCTTGCTTCCTGTGTACAGT CCGACAAAACTTGAGACTATTGTACCACACCCAACCTGCATGTTTCACAA GACAACCAAGAATCCTTGACAACCAACCTGTTGACCGATCCCTCCCCCCC CCCCCCCCCCCCCGCACAAGCCGGGGGGCACGAACGCCGCCCGCCACCCC CNNNNNNNNNNTTCACAAGACAACCAAGAATCCTTGACAACCAACCTGTT GACCGATCCCTCCCCCCCCCCCCTTCATTCATGGAGAAGGCCGAGTTCAC GAAAGCTTGCAGCGACCTCATCGCGGAGGCAAATGCACCGGAGCTTATTC GGAAGTTGCTGGGGCAGCGGAATGCAATCTTGGGGATGGAGCGGACAGAA GGTGTGTGCTTCCTATGCCACCTGACCTCTGCTTTCCTCGAGGAGCAATG ATACGATCTCTGGGTATTACCCGGTTGTTGGGCAAATGTGCGGCTCATGC ACACACGGAAAGAGAGATAGAGGAGGCAGGTTTTAAGGTTGATGGGCTGC CATAGAAGGTGACATACAGATTTGAAAGTTCTCTTTTCGGTCGGGGGAGA AACAGTTATTTGCCAGTTAGGATGGGGCATTCTTAAAGTCCGTCATCCTG CCCCTCCCAATTGGTTTACTCTCTTGTGGTGGAGATAGGGTTGGGGCTAT CATTGTGATATTGAGGTAAGGTTTCGGTGTATGGTAGGTGTATATAGGAC ATACGTGTCTTCATGTTAGTTACGATAGTGCATGTAATAGTTGAGTTAAC TATTTGGTTATTGCTACATTTATGAATAACTAGGCAATATTCTGTGTGGT CTATTAATATTATCATATTTATACTCTATACCCCAAACCAAGTCTTGGTT CACTCCTTTAATGTCGGCATATGTCAGTTCCTCTCGGAATGAGGAAGACA CTGGCCACCCACCCTGGGCTTCTGGTGTGAGCCAAACAACTGACAATCTT CATCCTTGCCCATCCACAACCACTTGGATGGAATTGGTGCATGGGATGTG ATGTCATACAGATGTTGAAGGATGCTTTGGCATTCTCTTCTCCCTCCTGC ACAAGACTGACAACCCCAAGGTGGCAATGCCAGCTCTGTCAATGGAGATA TCTGGAAACATTCTTGAAGTTGTGGATGGTCATGCAGCACTGCGACTCAA ACTGTAAGCTACAATATAGTAGTGGAATATACTCTTCTCATGGTCGTGTT TGTGTTCCCTAATGATTGAGTTGTCAACTGAATCTAATCAGGAAAGGAGT CCATCCAACTGTATGAAAAAGAAGAATGTCTTGACGTTTTTGTTGCATGG GTTGATGTACCATCCCATGTACCATCATCTGTTAGGTTGCAATCGAGTCA CTCAAGGTTTTCTTGTTGTGCAATATTGTATTTGACATTTTTGGTAGGTT CACCTTGTAATAAGAAGTCCTTATTGTTATCCTCTTCTTGGTCATATCCC CCACCCACCTTCTCTTTGTCCCTTGTCCATTTTGTTCTCCAGAGTGACCA ACCTGTATAACATGCTTCCAGTTTGCAGTGCAAGTCAGCTGGATGTATTG GTTAGTCTTATACGCTATGCACATGTTGCCAAGCTAACGGGGATGCTTTC TACCTTTTTCACTTGTGCAGACGAGTGGATCAAGGTACGTGTTGTGGTAG CGTTGTGTTAGCGTTGTGGTAGTGTTGTGATATATTATAAGTACATACGC ATGTTTAAACATCTGTCGAGTGGTATAATGTCTCCTCCTGTACATGACTG TTGTGGAAGAAGTGCCGTAGATGCTGTTCATACTGAGACATGGATTGATA CTCCAGTGTGCCTTTTTTGTTGAACTTCCTGTCAGTTATTTGTAATCAGT TATTTTTTTGTCAAAAGTGTTACCAAGCCTTACTGTAATCTGGTCTCTGT GTGACTAACATGACACCTCAACAGCACCATGTTGTGATTGCTCCTCCCCA CCTTGCTATGTATTTCTCTAATCTATTATCTCCTGTGCCGTTATTCCACT TGTCTATGTACTCTGGTGCAATGCTTGTTTCATGATACATATTTCCTGGG TATCATTGCAGGGATGGGACCTTTCAGTGCATGACCAGAGGCGTCTGTAC CTGCTTATTTCTGAAACCCTGGGGGATGAGGGCAAGGATGTTGAAAGTCA AAAGGTCAGTTAATCGACCTGTGCTTGTTGAGGTTACCATTTGACAATTT GGTGCACTTTTACTCAATGTCCCATGTCTCCATCTTACCCCTGCTGAACA TACGTTTCCAGTCTGATGTGTCCTTAACCCTTCAAGTAACCTTTTTGCCT CAGCTGCCTACATTGTGATCCTTGAATTATGTGAAAGCAGTTGCTAAGTC TAGTAGTTGGTAGTTTGTGTGATGTGAAAACCCTACACTTAAGCTTTTTC GTGTTTGTGTGATGTGAAACTGTACTGAAACAAACTGTGTCAACTTGTCT TTCACTTGACGTTTGAACCCGTTTGTACCAGTTCCTCATGAAGTACCTGG TGACGTTTGACGGTGCTTCTGCTGAGGAACTGTCTCAAGTTAAGGCTGCT GCTGTGAAGGGCTGTATCGGGGCAGTAAAAGCGCCCATTGTTAGCTTCAC AGAACAA
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Coding sequence (CDS) from alignment at C-tenellus_contig834:13092..16048+

>mRNA_C-tenellus_contig834.6.1 ID=mRNA_C-tenellus_contig834.6.1|Name=mRNA_C-tenellus_contig834.6.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=711bp|location=Sequence derived from alignment at C-tenellus_contig834:13092..16048+ (Choristocarpus tenellus KU2346)
ATGGCTGTGATCGTGTCTGCTCAGCTGGTCAATCTGACCGACAAGTCGGA
GCTCAAACTTGTGGAAGCGGTAGCATCATTATTGCCTTCAGGAAAGGCCG
AGTTCACGAAAGCTTGCAGCGACCTCATCGCGGAGGCAAATGCACCGGAG
CTTATTCGGAAGTTGCTGGGGCAGCGGAATGCAATCTTGGGGATGGAGCG
GACAGAAGATGTTGAAGGATGCTTTGGCATTCTCTTCTCCCTCCTGCACA
AGACTGACAACCCCAAGGTGGCAATGCCAGCTCTGTCAATGGAGATATCT
GGAAACATTCTTGAAGTTGTGGATGGTCATGCAGCACTGCGACTCAAACT
AGTGACCAACCTGTATAACATGCTTCCAGTTTGCAGTGCAAGTCAGCTGG
ATGTATTGGTTAGTCTTATACGCTATGCACATGTTGCCAAGCTAACGGGG
ATGCTTTCTACCTTTTTCACTTGTGCAGACGAGTGGATCAAGGGATGGGA
CCTTTCAGTGCATGACCAGAGGCGTCTGTACCTGCTTATTTCTGAAACCC
TGGGGGATGAGGGCAAGGATGTTGAAAGTCAAAAGTTCCTCATGAAGTAC
CTGGTGACGTTTGACGGTGCTTCTGCTGAGGAACTGTCTCAAGTTAAGGC
TGCTGCTGTGAAGGGCTGTATCGGGGCAGTAAAAGCGCCCATTGTTAGCT
TCACAGAACAA
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