mRNA_C-tenellus_contig834.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig834.4.1 vs. uniprot
Match: D7G6E5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E5_ECTSI) HSP 1 Score: 348 bits (894), Expect = 4.430e-114 Identity = 188/296 (63.51%), Postives = 225/296 (76.01%), Query Frame = 1 Query: 1 LLAVGVLCGTADAFVPAPVGLAGG--LNKHAMACQTSSAV---RYSSESMTMVFGGFKRGNIKSGVPSKISNLFNKGSRSKGKSNDGKSGNDDGGSKLPPAGPLGSSASADDSGDKQSSNPLIIFWAAYLGLLETQPIITKSLTSMIGFSLGDLLAQKGLEKKEEIDLTRLLRLASFGALIHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVIWNPIFGCLFFGYMGAVDGAGPAAIGSKIKNNLWTSVRGSWTVWPVAHAINFRFIPTSQRLLYINTIQIFYNCFLSIIAQRE 873 L+ G LC + DAFVPA V + ++K ++ + A+ R M++ GG K+G + V SKI+N+F GSR KG K+PP LG+S+SA+ G+K++ L + WAAY+ LL +QP++TKSLTSM GF+LGDLLAQK ++KKEEIDL RLL+LASFGALIHGS+GHFFYNFLDSKIPGTAALTVAKKVFIDQV+WNPIFGC+FFGYMGAVDG GP+ I KIKNNLWTSV+GSWTVWPVAHAINFR IPTSQRLLYINTIQIFYNCFLS+IAQRE Sbjct: 7 LVGAGALCASTDAFVPAAVPASSSTFVSKRSVVDAAAPAILASRGGDVMMSLGGGGSKKGGLPQSVSSKITNIFRGGSR-KGNXXXXXXXXXXXXGKVPP---LGASSSAEGDGEKKAKG-LGVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEEIDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRMIPTSQRLLYINTIQIFYNCFLSVIAQRE 297
BLAST of mRNA_C-tenellus_contig834.4.1 vs. uniprot
Match: A0A835Z9Q4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q4_9STRA) HSP 1 Score: 277 bits (709), Expect = 4.620e-86 Identity = 134/199 (67.34%), Postives = 161/199 (80.90%), Query Frame = 1 Query: 274 KLPPAGPLGSSASADDSGDKQSSNPLIIFWAAYLGLLETQPIITKSLTSMIGFSLGDLLAQKGLEKKEEIDLTRLLRLASFGALIHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVIWNPIFGCLFFGYMGAVDGAGPAAIGSKIKNNLWTSVRGSWTVWPVAHAINFRFIPTSQRLLYINTIQIFYNCFLSIIAQR 870 K PP GPL +S+++ D K+ + L+ WAAY L+ +PI+TK+LTSMIGF LGD LAQK + K E+ID RL R+ASFG LIHG+TGHFFY LDSKIPGTAALTVA KVFIDQ IWNPIFGC+FFGYMG +G P+A+ ++I+NNLW SV+GSWTVWPVAHAINFR IPTSQRLLYIN++QI YN FLSI++QR Sbjct: 91 KGPPTGPLSASSASGDG--KKKAGGLMAIWAAYNNSLDKRPILTKALTSMIGFGLGDFLAQKFISKSEKIDWERLGRMASFGLLIHGTTGHFFYGMLDSKIPGTAALTVATKVFIDQAIWNPIFGCMFFGYMGFAEGLSPSAVKARIQNNLWASVKGSWTVWPVAHAINFRCIPTSQRLLYINSVQIGYNMFLSILSQR 287
BLAST of mRNA_C-tenellus_contig834.4.1 vs. uniprot
Match: A0A7S2FYX3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYX3_9STRA) HSP 1 Score: 255 bits (651), Expect = 3.250e-78 Identity = 143/246 (58.13%), Postives = 169/246 (68.70%), Query Frame = 1 Query: 145 FGGFKRGNIKSGVPSKISNLFNKGSRSKGKSNDGKSGNDDGGSKLPPA---GPLGSSASADDSGDKQSSNPLIIFWAAYLGLLETQPIITKSLTSMIGFSLGDLLAQKGLEKKEEIDLTRLLRLASFGALIHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVIWNPIFGCLFFGYMGAVDGAGPAAIGSKIKNNLWTSVRGSWTVWPVAHAINFRFIPTSQRLLYINTIQIFYNCFLSIIAQRE 873 FGG RG I+ + + S NKG G +GN GG+ PP G L + AS D K+ L WAAY LET PI+TK+LTSMIGF+LGD+LAQ +EKK E D+ R +RLASFG LIHG+TGH+FY LD IPGT A+ V KV IDQV+WNPIFG +FF YMG +G GPAA+ +K+K +L T V GSWTVWP+AHAINFRFIPTSQRLLYINTIQIFYN FLSII +E Sbjct: 23 FGGRGRGGIRRSI--RKSPFNNKGGF-------GTNGNI-GGNGQPPIXXXGGLNADASGGDGDAKEDGQGL---WAAYNNKLETNPILTKALTSMIGFTLGDILAQNFVEKKGEYDIMRTIRLASFGFLIHGTTGHWFYGKLDKAIPGTGAMQVFSKVGIDQVLWNPIFGVMFFSYMGFTNGDGPAAVAAKVKRDLMTQVTGSWTVWPIAHAINFRFIPTSQRLLYINTIQIFYNVFLSIIGNKE 255
BLAST of mRNA_C-tenellus_contig834.4.1 vs. uniprot
Match: A0A7S2XWX9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWX9_9STRA) HSP 1 Score: 250 bits (639), Expect = 7.700e-76 Identity = 137/270 (50.74%), Postives = 170/270 (62.96%), Query Frame = 1 Query: 103 SSAVRYSSESMTMVFGGFKRGN-------IKSGVPSKISNLFNKGSRSKGKSNDGKSGNDDGGSK---------LPPAGPLGSSASADDSGDKQSSNPLIIFWAAYLGLLETQPIITKSLTSMIGFSLGDLLAQKGLEKKEEIDLTRLLRLASFGALIHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVIWNPIFGCLFFGYMGAVDGAGPAAIGSKIKNNLWTSVRGSWTVWPVAHAINFRFIPTSQRLLYINTIQIFYNCFLSIIA 864 +S + + ESM+M+FGGF +G+ +K G+ ++ N K GN G + L P +SAS++ + SNP WAAY LE+ PI TK+LTS++GFSLGD+LAQK L E D R+ RLASFG L HG GH+FY FLD+KIPGTA VA KV IDQ+IWNPIFG F GYMG +G +G KIKN+L +V GSWTVWP+AHAINFRFIPTSQRLLYIN+IQ+FYNCFLS +A Sbjct: 31 TSVRKINDESMSMLFGGFGKGSNNWGGFGVKRGISTR---------------NPIKGGNFGGNNXXXXXXXXXGLVPPRNSEASASSEGGDNNSGSNPFASLWAAYNAALESSPITTKALTSLVGFSLGDILAQKFLSAGEPFDFLRMARLASFGLLFHGPVGHYFYGFLDTKIPGTALSVVASKVAIDQIIWNPIFGTFFLGYMGFAEGKNAGEVGQKIKNDLVKAVTGSWTVWPIAHAINFRFIPTSQRLLYINSIQVFYNCFLSFLA 285
BLAST of mRNA_C-tenellus_contig834.4.1 vs. uniprot
Match: W7U673_9STRA (Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U673_9STRA) HSP 1 Score: 249 bits (635), Expect = 2.360e-75 Identity = 112/183 (61.20%), Postives = 144/183 (78.69%), Query Frame = 1 Query: 325 GDKQSSNPLIIFWAAYLGLLETQPIITKSLTSMIGFSLGDLLAQKGLEKKEEIDLTRLLRLASFGALIHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVIWNPIFGCLFFGYMGAVDGAGPAAIGSKIKNNLWTSVRGSWTVWPVAHAINFRFIPTSQRLLYINTIQIFYNCFLSIIAQRE 873 G+K NPL + W Y LL+ QP++TK+LTS +GFS+GDLLAQK ++K E +DL RLL+LA FG L+HG TGH+FY FLD K+PGT+A+TVA KV IDQ++WNPIFG +FFG++G +G I ++I+ +LW SV+GSWTVWP+AHAINFRFIP SQRLLYIN++QI YN FLS +A R Sbjct: 93 GNKGGENPLQLLWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRN 275
BLAST of mRNA_C-tenellus_contig834.4.1 vs. uniprot
Match: F0YKE1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKE1_AURAN) HSP 1 Score: 231 bits (590), Expect = 2.270e-70 Identity = 109/167 (65.27%), Postives = 130/167 (77.84%), Query Frame = 1 Query: 361 WAAYLGLLETQPIITKSLTSMIGFSLGDLLAQKGLEKKEEIDLTRLLRLASFGALIHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVIWNPIFGCLFFGYMGAVDGAGPAAIGSKIKNNLWTSVRGSWTVWPVAHAINFRFIPTSQRLLYINTIQIFYNCFLSII 861 WAAY LE P++ K LTSMIGF LGD+LAQ +EK ++ D+ R +R +SFG L+HG+T H+FY LD KIPGT A VA KV IDQV+WNPIFG +FFGYMG +G+G +KIKN+L T V GSWTVWP+AHAINF+FIP SQR+LYINTIQIFYNCFLSII Sbjct: 2 WAAYEAALEKDPLLIKGLTSMIGFFLGDVLAQCFIEKSDKYDIWRTIRFSSFGLLVHGTTSHWFYGKLDGKIPGTGAGAVASKVGIDQVLWNPIFGIMFFGYMGIFEGSGVGGTITKIKNDLLTQVTGSWTVWPIAHAINFKFIPNSQRVLYINTIQIFYNCFLSII 168
BLAST of mRNA_C-tenellus_contig834.4.1 vs. uniprot
Match: A0A6T7UAW2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A6T7UAW2_9EUKA) HSP 1 Score: 236 bits (601), Expect = 2.930e-70 Identity = 111/182 (60.99%), Postives = 135/182 (74.18%), Query Frame = 1 Query: 328 DKQSSNPLIIFWAAYLGLLETQPIITKSLTSMIGFSLGDLLAQKGLEKKEEIDLTRLLRLASFGALIHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVIWNPIFGCLFFGYMGAVDGAGPAAIGSKIKNNLWTSVRGSWTVWPVAHAINFRFIPTSQRLLYINTIQIFYNCFLSIIAQRE 873 D NPL+ W AY LE+ P+I K LTS GF LGDL+AQ + K + D RL RL+SFG +HGST HFFYNFLD KIPG +A +VA KVFIDQVIWNPIFG +FF Y+ A++G GP + +K+K L TSV GSW VWP+AH INFRFIP+SQR+LYIN+IQI YNCFLS+I+ R+ Sbjct: 112 DSNGDNPLVSIWKAYNSKLESDPLIMKMLTSFTGFLLGDLIAQTCITKGD-FDWFRLARLSSFGFFVHGSTSHFFYNFLDGKIPGKSAASVASKVFIDQVIWNPIFGVMFFSYVAALEGKGPEYVVNKVKKELLTSVTGSWKVWPIAHTINFRFIPSSQRVLYINSIQIGYNCFLSVISSRD 292
BLAST of mRNA_C-tenellus_contig834.4.1 vs. uniprot
Match: A0A5J4YL21_PORPP (Protein sym-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL21_PORPP) HSP 1 Score: 227 bits (579), Expect = 5.850e-67 Identity = 109/188 (57.98%), Postives = 136/188 (72.34%), Query Frame = 1 Query: 313 ADDSGDKQSSNPLIIFWAAYLGLLETQPIITKSLTSMIGFSLGDLLAQKGL-EKKEEIDLTRLLRLASFGALIHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVIWNPIFGCLFFGYMGAVDGAGPAAIGSKIKNNLWTSVRGSWTVWPVAHAINFRFIPTSQRLLYINTIQIFYNCFLSIIAQRE 873 A +GD SSNPL+ FW AY LE QP++ K++TS +GFSLGD+LAQK L K +D+ RL R+A+FG LIHG TGH+FY LD IPGT A VA KV IDQ++W PIF +FF ++GA++G I K+K + WT V GSW VWP+ H INFRFIP+SQRLLYINTIQI YN FLS+IA ++ Sbjct: 101 AGGAGDGASSNPLLTFWKAYNSALEAQPLLIKAMTSFVGFSLGDILAQKFLGPKNAALDMNRLGRMAAFGFLIHGPTGHYFYGALDRAIPGTEAWKVASKVAIDQILWAPIFTVMFFAFIGAMEGRSVDDIKQKVKRDTWTGVTGSWKVWPLVHTINFRFIPSSQRLLYINTIQIAYNMFLSLIANKD 288
BLAST of mRNA_C-tenellus_contig834.4.1 vs. uniprot
Match: A0A7S2RA66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RA66_9STRA) HSP 1 Score: 223 bits (569), Expect = 6.250e-67 Identity = 106/171 (61.99%), Postives = 130/171 (76.02%), Query Frame = 1 Query: 361 WAAYLGLLETQPIITKSLTSMIGFSLGDLLAQKGLEKKEEIDLTRLLRLASFGALIHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVIWNPIFGCLFFGYMGAVDGAGPAAIGSKIKNNLWTSVRGSWTVWPVAHAINFRFIPTSQRLLYINTIQIFYNCFLSIIAQRE 873 WAAY LLETQP++TK+LTSM GF+LGD+LAQ ++KKE+ D+ R +RL SFG L+HG+TGH+FY FLDSK+PGT +TVA KV IDQV WNP FG +FF Y+G +G A I KIK +L T+V GSW VW AH INF FIP SQRLLYIN+IQI YN FLS + ++ Sbjct: 14 WAAYNRLLETQPLLTKALTSMTGFTLGDVLAQNFVDKKEKYDVMRTVRLGSFGLLVHGTTGHYFYGFLDSKLPGTKPVTVASKVLIDQVFWNPCFGIMFFTYLGLAEGKSFADIMKKIKADLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYNIFLSFLGNKK 184
BLAST of mRNA_C-tenellus_contig834.4.1 vs. uniprot
Match: A0A7S4M7F7_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M7F7_9EUKA) HSP 1 Score: 224 bits (572), Expect = 1.070e-66 Identity = 104/182 (57.14%), Postives = 131/182 (71.98%), Query Frame = 1 Query: 328 DKQSSNPLIIFWAAYLGLLETQPIITKSLTSMIGFSLGDLLAQKGLEKKEEIDLTRLLRLASFGALIHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVIWNPIFGCLFFGYMGAVDGAGPAAIGSKIKNNLWTSVRGSWTVWPVAHAINFRFIPTSQRLLYINTIQIFYNCFLSIIAQRE 873 D SNPL W +Y L+ +P++ K+LTSM+GF+LGD+LAQ ++K + D R +RL SFG L+HG+T H+FY FLD KIPGT V KVFIDQV+WNP FG +FF Y+ A + G + K++N L T V GSW VWP+AHAINFRFIP+SQR+LYINTIQI YN FLSIIA R+ Sbjct: 53 DDSGSNPLEALWKSYETALDEKPLLMKALTSMVGFALGDILAQTFIQKGDAFDWARFIRLTSFGCLVHGTTSHYFYGFLDGKIPGTGGKQVFTKVFIDQVLWNPCFGVMFFSYVAAFELKGIGYVKDKVQNELLTQVFGSWKVWPIAHAINFRFIPSSQRVLYINTIQIGYNMFLSIIANRD 234 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig834.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig834.4.1 >prot_C-tenellus_contig834.4.1 ID=prot_C-tenellus_contig834.4.1|Name=mRNA_C-tenellus_contig834.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=263bp MACQTSSAVRYSSESMTMVFGGFKRGNIKSGVPSKISNLFNKGSRSKGKSback to top mRNA from alignment at C-tenellus_contig834:6544..9893+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig834.4.1 ID=mRNA_C-tenellus_contig834.4.1|Name=mRNA_C-tenellus_contig834.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3350bp|location=Sequence derived from alignment at C-tenellus_contig834:6544..9893+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig834:6544..9893+ >mRNA_C-tenellus_contig834.4.1 ID=mRNA_C-tenellus_contig834.4.1|Name=mRNA_C-tenellus_contig834.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=789bp|location=Sequence derived from alignment at C-tenellus_contig834:6544..9893+ (Choristocarpus tenellus KU2346)back to top |