mRNA_C-tenellus_contig834.3.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig834.3.2 vs. uniprot
Match: D7G6E4_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E4_ECTSI) HSP 1 Score: 220 bits (560), Expect = 5.010e-62 Identity = 104/170 (61.18%), Postives = 136/170 (80.00%), Query Frame = 2 Query: 1262 IAELKQKIMDEALGTSNGLKATPEQKEIISSSVNKLVSLNPPVTPSCSTLATGTWDLLYTTTSGASGGKLGPFIGKVRQMVDVASLLYVNYVEVGPLLGELEATWEVMNDTQWKVIFKTIKFSLWGLQLIEKEIDNVGIWTLMYLDQNMRVLSARSTERTSGNMYILVKS 1771 + LKQ I++EA GTSNGLKATP+Q++ IS ++N L + NP + S LATGTWDL+YTTT GASGGKLGPFIG+V+Q VD+A LYVNYV +GPL G LEATW+V+N +QWKV+FK+I F L+G QL++ E+D G+WTL YLD +MRVL+ARS ER +GN+Y+L ++ Sbjct: 59 VRALKQTILEEAAGTSNGLKATPQQRDAISKAINGLAAANPTKDITTSELATGTWDLIYTTTPGASGGKLGPFIGEVQQEVDIAEGLYVNYVRLGPLTGRLEATWDVVNKSQWKVVFKSIAFLLFGQQLVKNELDQAGLWTLSYLDDDMRVLTARSLERDTGNVYVLARA 228
BLAST of mRNA_C-tenellus_contig834.3.2 vs. uniprot
Match: A0A7S4CQT7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CQT7_9EUGL) HSP 1 Score: 132 bits (332), Expect = 7.600e-30 Identity = 81/188 (43.09%), Postives = 112/188 (59.57%), Query Frame = 2 Query: 1217 LLSSTTPLLDESGLGIAE-LKQKIMDEALGTSNGLKATPEQKEIISSSVNKLVSLNPPVTPSCSTLATGTWDLLYTTTSGASGGKLGPFIGKVRQMVDVASLLYVNYVEVGPLLGE--LEATWEVMNDTQWKVIFKTIKFSLWGLQLIEKEIDNVGIWTLMYLDQNMRVLSARSTERTS-GNMYILVK 1768 L+++ + E G G E LK++I A GTSNG A+ + K +V+KL LNP + S TG W LLYTT +G S GKLGPF+G V Q V +S Y N V +GP + E L A W+V+ +W+V F+ I+FSL+G + EKE+ N G+W + YLD +MRVL A + N+Y+LVK Sbjct: 163 LMTTAGDVETERGGGTVESLKKEIFRLAEGTSNGTSASEDTKAAFLDAVSKLEKLNPEPEIATSEGMTGNWKLLYTTNTGNSAGKLGPFVGDVFQNVVYSSGKYENIVRLGPGIVEACLGADWDVLGPCKWQVNFRYIRFSLFGNVVSEKEVSNCGVWRMTYLDDSMRVLWASGGKNAKVENVYVLVK 350
BLAST of mRNA_C-tenellus_contig834.3.2 vs. uniprot
Match: A0A7S2XW95_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW95_9STRA) HSP 1 Score: 127 bits (318), Expect = 4.000e-29 Identity = 71/169 (42.01%), Postives = 102/169 (60.36%), Query Frame = 2 Query: 1262 IAELKQKIMDEALGTSNGLKATPEQKEIISSSVNKLVSLNPPVTPSCSTLATGTWDLLYTTTSGASGGKLGPFIGKVRQMVDVASLLYVNYVEVGPLLGELEATWEVMNDTQWKVIFKTIKFSLWGLQLIEKEIDNV--GIWTLMYLDQNMRVLSARSTERTSGNMYIL 1762 + + + I+ A GTSNG+KA+ E KE I+ +L +LN + S L G WDL+YTT G S GKLGPF+G+V+Q++D+ YVN V VG + L ATW N+ W VIFK + F L+G+ +I K+ + G W + ++D NMR+L A S + N+YIL Sbjct: 61 VEDASKAIVQLAQGTSNGVKASTEIKEKIAGLAERLENLNQAKDMTSSQLLQGEWDLIYTTNQGNSAGKLGPFVGEVKQIIDLQEDRYVNMVTVGIIEAVLMATWITRNNRNWTVIFKDVTFKLFGIPVISKKFPDSARGDWEMTFMDDNMRILYA-SGKAGVRNIYIL 228
BLAST of mRNA_C-tenellus_contig834.3.2 vs. uniprot
Match: A0A8J6CA72_DIALT (PAP_fibrillin domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA72_DIALT) HSP 1 Score: 125 bits (314), Expect = 5.320e-29 Identity = 70/176 (39.77%), Postives = 100/176 (56.82%), Query Frame = 2 Query: 1271 LKQKIMDEALGTSNGLKATPEQKEIISSSVNKLVSLNPPVTPSCSTLATGTWDLLYTTTSGASGGKLGPFIGKVRQMVDVASLLYVNYVEVGP-----LLGELEATWEVMNDTQWKVIFKTIKFSLWGLQLI-EKEIDNVGIWTLMYLDQNMRVLSARSTERTSGNMYILVKSSTS 1780 LK I+ A GT NGL A I + L LNP + S L G W L+YT+TSG S GK+GPF+G+V Q D+ Y N+V +GP + GEL+ATW+V+ D W+V FK+I F L GL ++ +K + G W L+Y D + R+L A+ + N+Y+L ++ S Sbjct: 27 LKSSIVRLAAGTQNGLTADVSTAAQIQALAKLLEELNPTAHLATSELVDGQWQLVYTSTSGGSAGKIGPFVGRVEQHFDLRQGRYKNFVHLGPQAIDLVTGELQATWDVLGDALWRVNFKSISFFLLGLPIVKDKPLSQCGTWRLVYTDDDFRILWAQGGTKPE-NIYVLKRTGAS 201
BLAST of mRNA_C-tenellus_contig834.3.2 vs. uniprot
Match: K8Z6W7_NANGC (PAP_fibrillin domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z6W7_NANGC) HSP 1 Score: 125 bits (315), Expect = 1.060e-28 Identity = 72/176 (40.91%), Postives = 103/176 (58.52%), Query Frame = 2 Query: 1262 IAELKQKIMDEALGTSNGLKATPEQKEIISSSVNKLVSLNPPVTPSCSTLATGTWDLLYTTTSGASGGKLGPFIGKVRQMVDVASLLYVNYVEV--GPLLGELEATWEVMNDTQWKVIFKTIKFSLWGLQLIEKE--IDNVGIWTLMYLDQNMRVLSARSTERTS-----GNMYIL 1762 +A LKQ + A NGLKAT K I S ++L+ NP + S GTW L+YT+TSG S GKLGPF+G+V Q +D A YVN+V + G + G L ATWEV +WKVIF+ I F ++G+ L++K+ G W L Y+D+++R+L+A + N+Y+L Sbjct: 63 VAALKQDLYAVAKNKDNGLKATESDKAKILSLASELIKRNPTKNIATSDKVDGTWRLVYTSTSGGSAGKLGPFVGQVLQKIDTAGGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRVFGIPLVDKKPLSGQAGQWKLTYVDEDLRILTAAALTNEGKPAKVSNIYVL 238
BLAST of mRNA_C-tenellus_contig834.3.2 vs. uniprot
Match: A0A6U0KQ85_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0KQ85_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.110e-27 Identity = 79/207 (38.16%), Postives = 119/207 (57.49%), Query Frame = 2 Query: 1187 SSKAVPRGKTLLSSTTPLLDESGLGI-----AELKQKIMDEALGTSNGLKATPEQKEIISSSVNKLVSLNPPVTPSCSTLATGTWDLLYTTTSGASGGKLGPFIGKVRQMV-----DVASLLYVNYVEV--GPLLGELEATWEVMNDTQWKVIFKTIKFSLWGLQLIEKEIDNVGIWTLMYLDQNMRVLSARSTERT-SGNMYILVK 1768 S+ A+P G+ LLS P ++G I ++K +I A GTSNG+ A+ E + IS V +L + NP + S G+W L+YTT G+S GKLGP +G+V+Q++ D Y N+V V G + G L ATW+V+ +W+V FK+++FS+ G+ L+E E+ VGIW +LD + R+L A + N+YIL K Sbjct: 46 STTALPIGQ-LLSDFLPK-SQTGSAIDPQRIQDIKTEIKALAKGTSNGISASKEVRNQISQLVAELEAANPTPDLTNSPKLNGSWKLVYTTNEGSSAGKLGPLVGEVQQLIRIDGRDGGEQDYYNFVRVAGGAIEGALRATWDVLAKDKWQVNFKSVRFSVLGIPLVEMELSAVGIWRKSFLDDDFRILYAAGGKNVPKENIYILAK 250
BLAST of mRNA_C-tenellus_contig834.3.2 vs. uniprot
Match: A0A7S0W280_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W280_9CRYP) HSP 1 Score: 90.5 bits (223), Expect = 3.090e-16 Identity = 59/177 (33.33%), Postives = 96/177 (54.24%), Query Frame = 2 Query: 1301 GTSNGLKATPEQKEIISSSVNKLVSLNPPVTPS------CSTLATGTWDLLYTTTSGASGGKLGPFIGKVRQM----VDVASLLYVNYVEVGPLLGELEATWEVMNDTQWKVIFKTIKFSLWGLQLIEKEIDN---------VGIWTLMYLDQNMRVLSARSTERTSGNMYILVKSS 1774 G NG+ ATPE++E I + LV+LNP P+ T G++ +YT T+GAS GK+GPF+G V Q +D + N +++GPL G+L A + VIF+++ F L+G+ + E+E VG W + Y+D+++RVL + + GN+ L+++S Sbjct: 91 GPKNGVGATPEEREDIEGKLRTLVALNPTENPADVLVGEWQTFLDGSFKCIYTNTTGASNGKVGPFVGDVWQQFVTAIDGETGRVTNNLKLGPLRGQLTARCVRRSARVMDVIFESVVFRLFGIPVSEREFGAGGADGGEPPVGSWDIQYMDRDLRVLVSNA-----GNIECLLRTS 262
BLAST of mRNA_C-tenellus_contig834.3.2 vs. uniprot
Match: A0A7S0G154_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G154_9RHOD) HSP 1 Score: 84.7 bits (208), Expect = 9.570e-15 Identity = 56/190 (29.47%), Postives = 101/190 (53.16%), Query Frame = 2 Query: 1223 SSTTPLLDESGLGIAELKQKIMDEALGTS-NGLKATPEQKEIISSSVNKL-----VSLNPPVTPSCSTLATGTWDLLYTTTSGASGGKLGPFIGKVRQMVDVASLLYVNYVEVGPLLGELEATWEVMNDTQWKVIFKTIKFSLWGLQLIEKEIDNV--GIWTLMYLDQNMRVLSARSTERTSGNMYILVK 1768 SS T +D + A L++++++ T NG T E K I+ +L V P T + G+W L YT++ S GK+GPF+G+V+Q +D+ + + N +GPL +L ATW+V++D + V+F T + SL+G+ + + + G W + Y D+++RVL + ++ M +++ Sbjct: 27 SSRTEKIDSA----ASLRKELLNACERTRLNGTAETEETKSSIAKMAAELDEAWSVEGVNPATDGVG-MIDGSWYLEYTSSISTSSGKVGPFVGQVKQKIDLENRRFENICLLGPLKFDLGATWKVLDDNNFNVLFLTKEISLFGISVQKSPFPDGSGGFWRMGYTDEDLRVLWTKRFQKDKNEMLFVLR 211
BLAST of mRNA_C-tenellus_contig834.3.2 vs. uniprot
Match: A0A7S0Y0V0_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0V0_HEMAN) HSP 1 Score: 83.2 bits (204), Expect = 3.240e-14 Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 2 Query: 1301 GTSNGLKATPEQKEIISSSVNKLVSLNPPVTPSCSTLATGTWDLLYTTTSGASGGKLGPFIGKVRQMVDVASLLYVNYVEVGPLLGELEATWEVMND 1591 G NG+ A+ E +E IS++ ++L LNP + S L G W LLYT+T+GAS GKLGP +G+V Q +D+A+ Y N V GP+ L A WEV D Sbjct: 113 GPKNGVGASQELQESISNACSELARLNPTKQQAKSPLLNGDWSLLYTSTTGASAGKLGPLVGEVEQRIDMAAGKYDNVVVAGPIEAVLGAHWEVPAD 209
BLAST of mRNA_C-tenellus_contig834.3.2 vs. uniprot
Match: F0YPM6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPM6_AURAN) HSP 1 Score: 78.6 bits (192), Expect = 3.270e-11 Identity = 55/175 (31.43%), Postives = 92/175 (52.57%), Query Frame = 2 Query: 1214 TLLSSTTPLLDESGLGIAELKQKIMDEALGTSNGLKATPEQKEIISSSVNKLVSLNP-PVTPSCSTLATGTWDLLYTTTSGASGGKLGPFIGKVRQMVDVASLLYVNYVEVGPLLGELEATWEVMNDTQW--KVIFKTIKFSLWGLQLIEKEIDNVGIWTLMYLDQNMRVLSARS 1729 T + P L G A LK+++ A T NG+ A+ + + +L S P+ G +L+++T++GAS GKLGPF+G V Q + +VN VE+GPL L A E ++ + W +V F+++ SL+G+++ K I G W + Y+D ++R++ A S Sbjct: 20 TTKNQRAPSLALKGESTAALKEQLRRTAAPTQNGVGASERTVLTVEAIAAELESRRDLDAFPALE----GAHELVFSTSTGASSGKLGPFVGHVTQTF-LDEKTFVNAVELGPLKVALTARREPLDMSGWTYRVTFESMGLSLFGVEVGSKPISGGGTWNIRYVDDDLRIMDAPS 189 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig834.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig834.3.2 >prot_C-tenellus_contig834.3.2 ID=prot_C-tenellus_contig834.3.2|Name=mRNA_C-tenellus_contig834.3.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=271bp MQNESHLQATLHSLSAPHTCIHARPACPPTYLAVVVCPPILRVQGGMFIPback to top mRNA from alignment at C-tenellus_contig834:2705..6079- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig834.3.2 ID=mRNA_C-tenellus_contig834.3.2|Name=mRNA_C-tenellus_contig834.3.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3375bp|location=Sequence derived from alignment at C-tenellus_contig834:2705..6079- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig834:2705..6079- >mRNA_C-tenellus_contig834.3.2 ID=mRNA_C-tenellus_contig834.3.2|Name=mRNA_C-tenellus_contig834.3.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=813bp|location=Sequence derived from alignment at C-tenellus_contig834:2705..6079- (Choristocarpus tenellus KU2346)back to top |