mRNA_C-tenellus_contig8327.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8327.2.1 vs. uniprot
Match: D7FQD4_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD4_ECTSI) HSP 1 Score: 123 bits (309), Expect = 3.860e-31 Identity = 61/146 (41.78%), Postives = 95/146 (65.07%), Query Frame = 3 Query: 159 RLSTRKEREILACFQAFDQGGKGFLDKDDLKCAITALTGSRPTKYEVKRLLDAAIVQEPACPGVTQTFFLESMSVRIAQVDPAEEVREIFRAFDKRGRGFLTKEDLQEVSVSGWRRGIESPQKLSSVGFDACWLV*REFVNGADWL 596 R++ K +EI CF F K +LDKDDLK A+TAL G RP+K++V+++L A ++P CPG+++ F+ESM R+A VDPAEE+R+IF+AFD+ RGF+T++DL++V + P K++ + +A W + DW+ Sbjct: 4 RITESKLQEISDCFNEFSDN-KSYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADW----DGSGRVDWI 144
BLAST of mRNA_C-tenellus_contig8327.2.1 vs. uniprot
Match: A0A812C2P9_SEPPH (EF-hand calcium-binding domain-containing protein 11 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812C2P9_SEPPH) HSP 1 Score: 77.8 bits (190), Expect = 8.850e-14 Identity = 40/107 (37.38%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 168 TRKEREIL-ACFQAFDQGGKGFLDKDDLKCAITALTGSRPTKYEVKRLLDAAIVQEPACPGVTQTFFLESMSVRIAQVDPAEEVREIFRAFDKRGRGFLTKEDLQEV 485 ++KE ++L FQ D+GGKG+L ++DLK ++ + G +P+KYE +++ + PG+ FLE M ++ D EE+R+ F AFD + GFL EDL++V Sbjct: 62 SKKETKLLHKVFQDCDEGGKGYLTREDLKVSLVLVFGYKPSKYETDQMMKKYCHGDEINPGLNLEQFLEVMKPKMLVKDEDEEIRQTFMAFDSQCNGFLKVEDLKKV 168
BLAST of mRNA_C-tenellus_contig8327.2.1 vs. uniprot
Match: A0A401PTM7_SCYTO (Uncharacterized protein n=2 Tax=Scyliorhinus TaxID=7829 RepID=A0A401PTM7_SCYTO) HSP 1 Score: 75.1 bits (183), Expect = 1.830e-13 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 3 Query: 132 CPVKEDRKYRLSTRKEREILACFQAFDQGGKGFLDKDDLKCAITALTGSRPTKYEVKRLLDAAIVQEPACPGVTQTFFLESMSVRIAQVDPAEEVREIFRAFDKRGRGFLTKEDLQEV 485 C V E+R ++ + + F D G KG+L ++DLK A+ A+ G +P+K E ++ AA QE PG++ F MS ++A D +E+R IF AFD R RGFLT ED + Sbjct: 7 CIVGEERI--VTDSDKSHFVTVFHECDLGQKGYLSREDLKVAVVAIFGYKPSKMETDVVMAAA--QENDLPGLSLEQFTVLMSRKMAAQDRYDEIRHIFSAFDARCRGFLTLEDFKRA 120
BLAST of mRNA_C-tenellus_contig8327.2.1 vs. uniprot
Match: A0A6G0X8N6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8N6_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.050e-12 Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 186 ILACFQAFDQGGKGFLDKDDLKCAITALTGSRPTKYEVKRLLDAAIVQEPACPGVTQTFFLESMSVRIAQVDPAEEVREIFRAFDKRGRGFLTKEDLQEV 485 +L CF+ +D G KG+L KD++K A+TAL GS PTK + +L + Q + Q FL+ MS R+ VD E +R F+AFD GF++ ++ +++ Sbjct: 9 VLECFRRYDSGQKGYLIKDEVKWAVTALLGSTPTKLVLVQLFNIPQEQYKDM-RIDQDIFLQVMSRRMENVDVTETIRRWFKAFDTDSSGFISWKNFEKI 107
BLAST of mRNA_C-tenellus_contig8327.2.1 vs. uniprot
Match: A0A8D2Q7D5_VARKO (EF-hand calcium binding domain 11 n=1 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2Q7D5_VARKO) HSP 1 Score: 73.6 bits (179), Expect = 1.280e-12 Identity = 44/132 (33.33%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 198 FQAFDQGGKGFLDKDDLKCAITALTGSRPTKYEVKRLLDAAIVQEPACPGVTQTFFLESMSVRIAQVDPAEEVREIFRAFDKRGRGFLTKEDLQE------------VSVSGWRRG-IESPQKLSSVGFDAC 554 F+A D+G KG+L ++D K A+ L G +P+K EV ++ A+++Q PG++ FL MS + A EVR++F AFD++ +GFL+ ED ++ + + +RR I+SP G + C Sbjct: 19 FEASDEGNKGYLSREDYKVAVVMLFGYKPSKVEVDSIM-ASVMQSQ--PGLSLEKFLNVMSTKKAARFYHNEVRQLFTAFDRQCKGFLSFEDFKKAFNIVAPKLPERIIIEAFRRSCIKSPASAEKAGKETC 147
BLAST of mRNA_C-tenellus_contig8327.2.1 vs. uniprot
Match: UPI001CB81A38 (EF-hand calcium-binding domain-containing protein 11 isoform X1 n=1 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=UPI001CB81A38) HSP 1 Score: 71.6 bits (174), Expect = 7.690e-12 Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 3 Query: 129 LCPVKEDRKYRLSTRKER-EILACFQAFDQGGKGFLDKDDLKCAITALTGSRPTKYEVKRLLDAAIVQEPACPGVTQTFFLESMSVRIAQVDPAEEVREIFRAFDKRGRGFLTKEDLQEV 485 LC E+R + T E+ + F+ D G KG+L ++DLK A+ A G +P+K E+ ++ A+ E PG+ F MS ++A D +E+R+IF AFD R GFLT +D + Sbjct: 7 LCTADEER---IVTDLEKCHFVTVFRECDLGQKGYLSREDLKVAVVAAFGYKPSKLEIDMMMAGAV--ENNLPGLPLEQFTALMSRKLAAQDRYDEIRQIFSAFDARCCGFLTLDDFKRA 121
BLAST of mRNA_C-tenellus_contig8327.2.1 vs. uniprot
Match: A0A388KTV3_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KTV3_CHABU) HSP 1 Score: 73.2 bits (178), Expect = 1.100e-11 Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 3 Query: 183 EILACFQAFDQGGKGFLDKDDLKCAITALTGSRPTKYEVKRLLDAAIVQEPACPGVTQTFFLESMSVRIAQVDPAEEVREIFRAFDKRGRGFLTKEDLQEV 485 ++ F A+D GGKG L +LKCA+T LTG +P+K E+ AA + V Q+ F +S R+ DP + VR F AFD RG GF+ ++D + Sbjct: 142 DVDGVFSAYDNGGKGSLAPFELKCAMTCLTGIKPSKAEI-----AAFIASAPRGCVDQSTFKRLVSERLQLADPFDSVRHAFHAFDVRGVGFIGRQDFRSA 237
BLAST of mRNA_C-tenellus_contig8327.2.1 vs. uniprot
Match: UPI001CB7CF47 (EF-hand calcium-binding domain-containing protein 11 isoform X3 n=1 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=UPI001CB7CF47) HSP 1 Score: 70.9 bits (172), Expect = 1.310e-11 Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 3 Query: 153 KYRLSTRKEREILACFQAFDQGGKGFLDKDDLKCAITALTGSRPTKYEVKRLLDAAIVQEPACPGVTQTFFLESMSVRIAQVDPAEEVREIFRAFDKRGRGFLTKEDLQEV 485 K + S + + F+ D G KG+L ++DLK A+ A G +P+K E+ ++ A+ E PG+ F MS ++A D +E+R+IF AFD R GFLT +D + Sbjct: 18 KLQQSVHRLHPVAFVFRECDLGQKGYLSREDLKVAVVAAFGYKPSKLEIDMMMAGAV--ENNLPGLPLEQFTALMSRKLAAQDRYDEIRQIFSAFDARCCGFLTLDDFKRA 126
BLAST of mRNA_C-tenellus_contig8327.2.1 vs. uniprot
Match: UPI001CB853C2 (EF-hand calcium-binding domain-containing protein 11 isoform X2 n=1 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=UPI001CB853C2) HSP 1 Score: 70.9 bits (172), Expect = 1.370e-11 Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 3 Query: 153 KYRLSTRKEREILACFQAFDQGGKGFLDKDDLKCAITALTGSRPTKYEVKRLLDAAIVQEPACPGVTQTFFLESMSVRIAQVDPAEEVREIFRAFDKRGRGFLTKEDLQEV 485 K + S + + F+ D G KG+L ++DLK A+ A G +P+K E+ ++ A+ E PG+ F MS ++A D +E+R+IF AFD R GFLT +D + Sbjct: 18 KLQQSVHRLHPVAFVFRECDLGQKGYLSREDLKVAVVAAFGYKPSKLEIDMMMAGAV--ENNLPGLPLEQFTALMSRKLAAQDRYDEIRQIFSAFDARCCGFLTLDDFKRA 126
BLAST of mRNA_C-tenellus_contig8327.2.1 vs. uniprot
Match: A0A7S3V2M3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V2M3_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.750e-11 Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 3 Query: 186 ILACFQAFDQGGKGFLDKDDLKCAITALTGSRPTKYEVKRLL----------------------DAAIVQEPACPG--VTQTFFLESMSVRIAQVDPAEEVREIFRAFDKRGRGFLTKED 473 + ACF+ FD+G KGFL+K DLK A+ AL G RPTK+EV+++L D + +++ G + + F + M ++ VD + +R++F AFD RGFLT ED Sbjct: 7 VRACFRDFDKGNKGFLNKHDLKFAMAALFGIRPTKFEVEQILSIAKDYVIRLEQDRQKNSETVHDNSGLEDTEIEGARIYEPIFAQIMMSKLELVDEDDILRQVFCAFDVGCRGFLTFED 126 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8327.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8327.2.1 >prot_C-tenellus_contig8327.2.1 ID=prot_C-tenellus_contig8327.2.1|Name=mRNA_C-tenellus_contig8327.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=179bp MQGSGCANEGVSPLLPGTGRRGVFEASTSRLHTLCPVKEDRKYRLSTRKEback to top mRNA from alignment at C-tenellus_contig8327:562..2517- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8327.2.1 ID=mRNA_C-tenellus_contig8327.2.1|Name=mRNA_C-tenellus_contig8327.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1956bp|location=Sequence derived from alignment at C-tenellus_contig8327:562..2517- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8327:562..2517- >mRNA_C-tenellus_contig8327.2.1 ID=mRNA_C-tenellus_contig8327.2.1|Name=mRNA_C-tenellus_contig8327.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=537bp|location=Sequence derived from alignment at C-tenellus_contig8327:562..2517- (Choristocarpus tenellus KU2346)back to top |