mRNA_C-tenellus_contig832.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig832.1.1
Unique NamemRNA_C-tenellus_contig832.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig832.1.1 vs. uniprot
Match: D7FVC7_ECTSI (CTR-like PK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC7_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 3.020e-113
Identity = 165/269 (61.34%), Postives = 206/269 (76.58%), Query Frame = 1
Query:    1 SWTNIQFNEVTIGERIGGGAVGIVQKGWYKGREVALKTLFNCRVDDAVIQEYMDELNVLSQLDHPNIVGLLGACVEPPNLFFVMELCLHSLFHLLHECRRSLSTKEILHMALDVTKAMSYLHAHRPPIIHRDLKSLNLLQSKEGGPLKLCDFGLVRTKVTSAGTPAYMAPELLENRPFNKSVDVYAFGFLLWEMFSSEVPFRGYELSDIREAVLSGTRPKVPRGECPEIIRYLISRSWAEDQAQRPEFEEILTALEKTLNEIPDATHLE 807
            SW  I+F+E+ +GER+GGG+VG+V +G YKG  VA+KTLF+ R+D+ + +E+ DEL VLSQL HPNIV   GA + PPNLFFVMELC  SLF LLH CRR++  +  + MALDV++AM YLH+  PPIIHRDLKSLNLL +   GP+KLCDFGLVRT VT+AGT AYM+P+LL  +PFNKSVDVYAFG LLWE+FS E+PF G+E++DIREAV+SG RP VPRG+CP  I  L+ R W+E+  QRP F EI   L++ L     AT LE
Sbjct:   24 SWKTIKFDEILLGERLGGGSVGLVHRGQYKGENVAVKTLFDRRIDEGLKREFQDELLVLSQLSHPNIVRFYGASMIPPNLFFVMELCQRSLFDLLHHCRRTIGVRRRIGMALDVSRAMEYLHSRNPPIIHRDLKSLNLLLAGTEGPVKLCDFGLVRTTVTAAGTVAYMSPQLLLGQPFNKSVDVYAFGVLLWEIFSREIPFNGFEVADIREAVVSGGRPTVPRGDCPREISSLMCRCWSENPQQRPAFGEIEEILQELLLSTAAATELE 292          
BLAST of mRNA_C-tenellus_contig832.1.1 vs. uniprot
Match: A0A7S2WD89_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WD89_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.180e-96
Identity = 149/269 (55.39%), Postives = 193/269 (71.75%), Query Frame = 1
Query:    1 SWTNIQFNEVTIGERIGGGAVGIVQKGWYKGREVALKTLFNCRVDDAVIQEYMDELNVLSQLDHPNIVGLLGACVEPPNLFFVMELCLHSLFHLLHECRRSLSTKEILHMALDVTKAMSYLHAHRPPIIHRDLKSLNLLQSKEGGPLKLCDFGLVRTKVTSAGTPAYMAPELLENRPFNKSVDVYAFGFLLWEMFSSEVPFRGYELSDIREAVLSGTRPKVPRGECPEIIRYLISRSWAEDQAQRPEFEEILTALEKTLNEIPDATHLE 807
            SW  I F+E+ +G++IGGG VG++  G ++ R VALKTLF+ +VD+ ++QEYMDEL V+SQLDHPN+V  LGA + PPNL FVMELC  SL+ +LH  R   +T E + +ALDV  AM YLH+ +P IIHRDLKS NLL  +  G +KLCDFGLVRT+VT AGTPAYMAPELL  + FNKSVDVY+FG LL E+FS E+PF  Y+L DIR  V  G RP++P  + P  IR +IS  W +D + RP F  ++  LE  L ++P  ++LE
Sbjct:   56 SWRQIDFSEIELGKKIGGGGVGVIYSGHWRDRPVALKTLFDPKVDEDLMQEYMDELLVMSQLDHPNVVSFLGASMSPPNLCFVMELCDQSLYDMLHVQRLQFTTYECVQIALDVAMAMEYLHSLQPCIIHRDLKSHNLLVQR--GVVKLCDFGLVRTRVTQAGTPAYMAPELLAGQAFNKSVDVYSFGVLLCEIFSQEIPFSSYDLDDIRRCVARGDRPRIPTIDTPPRIRDMISDCWQQDPSDRPIFGRLVRDLEDLLRDLPQRSNLE 322          
BLAST of mRNA_C-tenellus_contig832.1.1 vs. uniprot
Match: A0A1W0A757_9STRA (Serine/threonine protein kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A757_9STRA)

HSP 1 Score: 293 bits (750), Expect = 3.410e-96
Identity = 144/255 (56.47%), Postives = 187/255 (73.33%), Query Frame = 1
Query:    1 SWTNIQFNEVTIGERIGGGAVGIVQKGWYKGREVALKTLFNCRVDDAVIQEYMDELNVLSQLDHPNIVGLLGACVEPPNLFFVMELCLHSLFHLLHECRRSLSTKEILHMALDVTKAMSYLHAHRPPIIHRDLKSLNLLQSKEGGPLKLCDFGLVRTKVTSAGTPAYMAPELLENRPFNKSVDVYAFGFLLWEMFSSEVPFRGYELSDIREAVLSGTRPKVPRGECPEIIRYLISRSWAEDQAQRPEFEEILTAL 765
            +WT+I+F E+T+GE+IGGG VGIV  G Y+G+EVALKTLF+ RVD A+  EYMDEL V+S+L HP++V  +GAC+E PNL FVMELC  SLF  LH     +S  E++ +A  V  AM YLHA  P IIHRDLKS N+L  K+G  +KLCDFGLV TK T+AGTPAYM PELL  RPF+K+VD+Y +G LLWE+F+ +VPFRGY++ DI+  VL+G RP +P  +CP   + LI + W +D + RP F+ I  +L
Sbjct:    6 AWTSIRFEELTVGEKIGGGGVGIVYSGTYRGKEVALKTLFDPRVDQALKDEYMDELLVMSKLHHPHVVEFIGACMEAPNLCFVMELCRMSLFERLHRTNEQISLNELVAIATGVASAMQYLHAQTPVIIHRDLKSQNVLLDKKG-IVKLCDFGLVCTKETTAGTPAYMPPELLAGRPFSKAVDIYMYGVLLWEIFARDVPFRGYDVDDIQRKVLAGHRPTIPTIDCPAKCQELIRQCWDQDPSGRPSFKSIHASL 259          
BLAST of mRNA_C-tenellus_contig832.1.1 vs. uniprot
Match: A0A835YIR4_9STRA (CTR-like PK n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR4_9STRA)

HSP 1 Score: 291 bits (745), Expect = 1.500e-95
Identity = 137/265 (51.70%), Postives = 192/265 (72.45%), Query Frame = 1
Query:   13 IQFNEVTIGERIGGGAVGIVQKGWYKGREVALKTLFNCRVDDAVIQEYMDELNVLSQLDHPNIVGLLGACVEPPNLFFVMELCLHSLFHLLHECRRSLSTKEILHMALDVTKAMSYLHAHRPPIIHRDLKSLNLLQSKEGGPLKLCDFGLVRTKVTSAGTPAYMAPELLENRPFNKSVDVYAFGFLLWEMFSSEVPFRGYELSDIREAVLSGTRPKVPRGECPEIIRYLISRSWAEDQAQRPEFEEILTALEKTLNEIPDATHLE 807
            + ++++T+GE+IGGG VG+V +GWY  + VALK LF+ R+++ +I+E+ +E+NVL+QL HPNIV +LG    PP+LFF+MELC  S++  LH  RR    +E+L +ALD   AM YLH+  PP++HRDLKS NLL   +G   KLCDFGLV T  T+AGTP YMAPELL+NRPF KSVDVYAFG LLWE+FS ++PFRG E+ D++E V +G RP VPRG+ P  IR ++ + WA+   +RP F + +  L++ + E    +H++
Sbjct:    4 VAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNT-KLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQELVQEHSSRSHVD 267          
BLAST of mRNA_C-tenellus_contig832.1.1 vs. uniprot
Match: A0A1V9ZDZ5_9STRA (Serine/threonine protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDZ5_9STRA)

HSP 1 Score: 291 bits (745), Expect = 1.830e-95
Identity = 144/255 (56.47%), Postives = 184/255 (72.16%), Query Frame = 1
Query:    1 SWTNIQFNEVTIGERIGGGAVGIVQKGWYKGREVALKTLFNCRVDDAVIQEYMDELNVLSQLDHPNIVGLLGACVEPPNLFFVMELCLHSLFHLLHECRRSLSTKEILHMALDVTKAMSYLHAHRPPIIHRDLKSLNLLQSKEGGPLKLCDFGLVRTKVTSAGTPAYMAPELLENRPFNKSVDVYAFGFLLWEMFSSEVPFRGYELSDIREAVLSGTRPKVPRGECPEIIRYLISRSWAEDQAQRPEFEEILTAL 765
            +WT+I F+E+T+G++IGGG VGIV  G Y+GR VALKTLF+ RVD A+  E+MDEL V+S+L HP++V  +GAC+E PNL FVMELC  SLF  LH    +L   E++ MA  V  AM YLHA  P IIHRDLKS N+L    G  +KLCDFGLV TK T+AGTPAYM PELL  RPF+K+VDVY FG LLWE+FS +VPFRGY++ DI+  VL+G RP +P  +CP+  + LI + W  + ++RP F  +  AL
Sbjct:    5 AWTSIAFDELTVGDKIGGGGVGIVYSGTYRGRPVALKTLFDPRVDKALKDEFMDELLVMSKLKHPHVVNFIGACMEAPNLCFVMELCTMSLFDRLHRTNDALGVSELVDMATGVADAMRYLHAQSPAIIHRDLKSQNVLLDHRG-VVKLCDFGLVCTKETTAGTPAYMPPELLAGRPFSKAVDVYMFGVLLWELFSRDVPFRGYDVDDIQRKVLAGDRPAIPTLDCPQKCQELIRQCWDNEPSRRPSFAAVYDAL 258          
BLAST of mRNA_C-tenellus_contig832.1.1 vs. uniprot
Match: A0A067CQ82_SAPPC (TKL protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQ82_SAPPC)

HSP 1 Score: 286 bits (733), Expect = 1.210e-93
Identity = 144/255 (56.47%), Postives = 183/255 (71.76%), Query Frame = 1
Query:    1 SWTNIQFNEVTIGERIGGGAVGIVQKGWYKGREVALKTLFNCRVDDAVIQEYMDELNVLSQLDHPNIVGLLGACVEPPNLFFVMELCLHSLFHLLHECRRSLSTKEILHMALDVTKAMSYLHAHRPPIIHRDLKSLNLLQSKEGGPLKLCDFGLVRTKVTSAGTPAYMAPELLENRPFNKSVDVYAFGFLLWEMFSSEVPFRGYELSDIREAVLSGTRPKVPRGECPEIIRYLISRSWAEDQAQRPEFEEILTAL 765
            +W +I+F+E+ +GE+IGGG VGIV  G Y+ + VALKTLF+ RVD A+  EYMDEL V+S+L HP+IV  +GAC+E PNL FVMELC  SLF  LH    +LS  E++ MA  V  AM YLHA  P IIHRDLKS N+L    G  +KLCDFGLV TK T+AGTPAYM PELL  RPF+K+VDVY +G LLWE+F+ +VPFRGY++ DI+  VL+G RP++P  +CP+  + LI   W  D A+RP F+ I   L
Sbjct:    5 AWKSIRFDELHVGEKIGGGGVGIVYSGTYREKPVALKTLFDPRVDQALKDEYMDELLVMSKLQHPHIVHFIGACMEAPNLCFVMELCNMSLFDRLHRTNLALSVTELVEMATGVADAMMYLHAQSPAIIHRDLKSQNVLLDMHG-VVKLCDFGLVCTKETTAGTPAYMPPELLAGRPFSKAVDVYMYGVLLWELFARDVPFRGYDVDDIQRKVLAGDRPQIPTLDCPQKCKELIRMCWDHDPARRPSFKTIHATL 258          
BLAST of mRNA_C-tenellus_contig832.1.1 vs. uniprot
Match: A0A6G0WVS0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WVS0_9STRA)

HSP 1 Score: 284 bits (726), Expect = 1.530e-92
Identity = 138/255 (54.12%), Postives = 182/255 (71.37%), Query Frame = 1
Query:    1 SWTNIQFNEVTIGERIGGGAVGIVQKGWYKGREVALKTLFNCRVDDAVIQEYMDELNVLSQLDHPNIVGLLGACVEPPNLFFVMELCLHSLFHLLHECRRSLSTKEILHMALDVTKAMSYLHAHRPPIIHRDLKSLNLLQSKEGGPLKLCDFGLVRTKVTSAGTPAYMAPELLENRPFNKSVDVYAFGFLLWEMFSSEVPFRGYELSDIREAVLSGTRPKVPRGECPEIIRYLISRSWAEDQAQRPEFEEILTAL 765
            SW +I+F E+T+G++IGGG VGIV +G Y  + VALKTLF+ RVDD++ QE+MDEL+V+S+L+HPN+V  +GAC+E PNL FVMELC  S++ LLH     +S   ++ MA  V  AM YLH   P I+HRDLKS N+L    G  +KLCDFGLV TK  +AGTPAYM PELL  +PF+K+VDVY FG LLWEMF+ +VPFRGY++ DI+  VL G RP++P  +CP   + LI + W  + + RP F+ I   L
Sbjct:    8 SWKSIRFQELTVGDKIGGGGVGIVYRGKYLSKPVALKTLFDPRVDDSLKQEFMDELHVMSKLNHPNVVAFIGACLEAPNLCFVMELCTMSMYELLHTTNDPISVASLVTMATQVVSAMRYLHGLSPAIVHRDLKSQNVLVDTRGD-VKLCDFGLVCTKERTAGTPAYMPPELLAGKPFSKAVDVYMFGVLLWEMFARDVPFRGYDIDDIQRKVLHGDRPRIPTTDCPPPCQELIRQCWHSEPSCRPTFDAIYDKL 261          
BLAST of mRNA_C-tenellus_contig832.1.1 vs. uniprot
Match: H3HDH0_PHYRM (2'-phosphotransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HDH0_PHYRM)

HSP 1 Score: 290 bits (742), Expect = 4.510e-92
Identity = 145/270 (53.70%), Postives = 194/270 (71.85%), Query Frame = 1
Query:    4 WTNIQFNEVTIGERIGGGAVGIVQKGWYKGREVALKTLFNCRVDDAVIQEYMDELNVLSQLDHPNIVGLLGACVEPPNLFFVMELCLHSLFHLLHECRRSLSTKEILHMALDVTKAMSYLHAHRPPIIHRDLKSLNLLQSKEGGPLKLCDFGLVRTKVTSAGTPAYMAPELLENRPFNKSVDVYAFGFLLWEMFSSEVPFRGYELSDIREAVLSGTRPKVPRGECPEIIRYLISRSWAEDQAQRPEFEEILTALEKTLNEIPDATHLEVS 813
            W NIQ +++T+ E IGGG V +V +G Y+ + VALKTLF+ RVD+A+ QE+MDEL V+S+L HPN+V L+GAC+EPPNL  VMELC HSL HLLH+    LS +++  +A +V   M +LH+ RP +IHRDLKS N+L   +G   KLCDFGLVRTK T+AGTP+YM PELL  +PF+KSVDV+ FG LLWE+FS +VPFRGY++SDIR  VL+G R +VP  +CP   + L+ + W  + + RP FEE+     +TL+ +  A   E S
Sbjct:   12 WENIQLSDLTVCETIGGGGVALVHRGIYRKQSVALKTLFDPRVDEALKQEFMDELLVMSKLKHPNVVTLIGACLEPPNLCMVMELCDHSLSHLLHDTNTYLSPQQLTRIAAEVANGMRFLHSRRPAVIHRDLKSANVLLDAKG-VAKLCDFGLVRTKFTTAGTPSYMPPELLSGQPFSKSVDVFMFGILLWEIFSRDVPFRGYDVSDIRRRVLAGERFRVPTVDCPRECQELMKQCWDGEPSCRPTFEEVY----ETLHNVSFARSFEAS 276          
BLAST of mRNA_C-tenellus_contig832.1.1 vs. uniprot
Match: A0A485KH26_9STRA (Aste57867_5585 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KH26_9STRA)

HSP 1 Score: 281 bits (720), Expect = 1.370e-91
Identity = 139/261 (53.26%), Postives = 185/261 (70.88%), Query Frame = 1
Query:    4 WTNIQFNEVTIGERIGGGAVGIVQKGWYKGREVALKTLFNCRVDDAVIQEYMDELNVLSQLDHPNIVGLLGACVEPPNLFFVMELCLHSLFHLLHECRRSLSTKEILHMALDVTKAMSYLHAHRPPIIHRDLKSLNLLQSKEGGPLKLCDFGLVRTKVTSAGTPAYMAPELLENRPFNKSVDVYAFGFLLWEMFSSEVPFRGYELSDIREAVLSGTRPKVPRGECPEIIRYLISRSWAEDQAQRPEFEEILTALEKTLNEI 786
            W NI F ++T+GE+IGGG VGIV +G Y+GR VALKTLF+ RVD A+ QE+MDEL V+S+L+HPN+V  +GAC+E PNL FVMELC  SL+ +LH     +    ++ +A  V  AM+YLH   P I+HRDLKS N+L   +G  +KLCDFGLV TK  +AGTP YM PELL  +PF+K+VDVY FG LLWEMF+ +VPFRGY++ DI+  VL+G RP +P  +CP   + LI + W+ D  +RP F+     +E+TL  +
Sbjct:   13 WKNIPFADLTVGEKIGGGGVGIVHRGKYRGRPVALKTLFDPRVDAALKQEFMDELLVMSKLEHPNVVEFIGACMEAPNLCFVMELCAMSLYDMLHGSNDPIRVPRLVSLATGVASAMNYLHTLSPAIVHRDLKSQNVLIDIDGD-VKLCDFGLVCTKERTAGTPNYMPPELLAGKPFSKAVDVYMFGVLLWEMFARDVPFRGYDIDDIQRKVLNGDRPAIPTIDCPPACQDLIRQCWSGDPTRRPSFD----VIERTLQHV 268          
BLAST of mRNA_C-tenellus_contig832.1.1 vs. uniprot
Match: G4ZW68_PHYSP (Protein kinase domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=G4ZW68_PHYSP)

HSP 1 Score: 281 bits (718), Expect = 2.340e-91
Identity = 138/255 (54.12%), Postives = 184/255 (72.16%), Query Frame = 1
Query:    4 WTNIQFNEVTIGERIGGGAVGIVQKGWYKGREVALKTLFNCRVDDAVIQEYMDELNVLSQLDHPNIVGLLGACVEPPNLFFVMELCLHSLFHLLHECRRSLSTKEILHMALDVTKAMSYLHAHRPPIIHRDLKSLNLLQSKEGGPLKLCDFGLVRTKVTSAGTPAYMAPELLENRPFNKSVDVYAFGFLLWEMFSSEVPFRGYELSDIREAVLSGTRPKVPRGECPEIIRYLISRSWAEDQAQRPEFEEILTALE 768
            W NI F+ +T+ E IGGG V +V +G Y+ + VALKTLF+ RVD+A+ QE+MDEL V+S L HPN+V L+GAC+EPPNL  VMELC +SL HLLH     LS +++  +A DV   M +LH+ +P +IHRDLKS N+L   +G   KLCDFGLVRTK T+AGTP+YM PELL  +PF+KSVDV+ FG LLWE+FS ++PFRGY++SDI+  VL G R +VP  +CP   + L+ + W  + + RP FEE+   L+
Sbjct:    9 WENIPFSSLTVCETIGGGGVALVHRGIYRKQSVALKTLFDPRVDEALKQEFMDELLVMSILRHPNVVTLIGACLEPPNLCMVMELCDYSLHHLLHGTNTYLSPQQLTRIAGDVANGMRFLHSRKPAVIHRDLKSANVLLDAKG-VAKLCDFGLVRTKFTTAGTPSYMPPELLSGQPFSKSVDVFMFGILLWEIFSRDIPFRGYDVSDIKWRVLGGERFRVPTVDCPRECQELMKQCWDGEPSSRPTFEEVCETLQ 262          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig832.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVC7_ECTSI3.020e-11361.34CTR-like PK n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A7S2WD89_9STRA1.180e-9655.39Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1W0A757_9STRA3.410e-9656.47Serine/threonine protein kinase n=1 Tax=Thraustoth... [more]
A0A835YIR4_9STRA1.500e-9551.70CTR-like PK n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A1V9ZDZ5_9STRA1.830e-9556.47Serine/threonine protein kinase n=1 Tax=Achlya hyp... [more]
A0A067CQ82_SAPPC1.210e-9356.47TKL protein kinase n=2 Tax=Saprolegnia TaxID=4769 ... [more]
A0A6G0WVS0_9STRA1.530e-9254.12Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
H3HDH0_PHYRM4.510e-9253.702'-phosphotransferase n=1 Tax=Phytophthora ramorum... [more]
A0A485KH26_9STRA1.370e-9153.26Aste57867_5585 protein n=1 Tax=Aphanomyces stellat... [more]
G4ZW68_PHYSP2.340e-9154.12Protein kinase domain-containing protein n=16 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig832contigC-tenellus_contig832:7095..10123 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog164328.Phyra96144
PFAMsPkinase_Tyr
Model size819
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons7
Evalue7.39e-93
EggNOG OGsCOG0515@1|root,COG1859@1|root,KOG0192@2759|Eukaryota,KOG2278@2759|Eukaryota,3Q71I@4776|Peronosporales
Ec32 ortholog descriptionCTR-like protein kinase
Ec32 orthologEc-14_000610.1
DescriptionProtein tyrosine kinase
Cds size819
COG categoryT
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig832.1.1prot_C-tenellus_contig832.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig832 7095..10123 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790097.8601146-CDS-C-tenellus_contig832:7094..72111680790097.8601146-CDS-C-tenellus_contig832:7094..7211Choristocarpus tenellus KU2346CDSC-tenellus_contig832 7095..7211 +
1680790097.9218812-CDS-C-tenellus_contig832:7370..74321680790097.9218812-CDS-C-tenellus_contig832:7370..7432Choristocarpus tenellus KU2346CDSC-tenellus_contig832 7371..7432 +
1680790097.933331-CDS-C-tenellus_contig832:7842..79961680790097.933331-CDS-C-tenellus_contig832:7842..7996Choristocarpus tenellus KU2346CDSC-tenellus_contig832 7843..7996 +
1680790097.9462354-CDS-C-tenellus_contig832:8306..84401680790097.9462354-CDS-C-tenellus_contig832:8306..8440Choristocarpus tenellus KU2346CDSC-tenellus_contig832 8307..8440 +
1680790097.9568992-CDS-C-tenellus_contig832:9206..93181680790097.9568992-CDS-C-tenellus_contig832:9206..9318Choristocarpus tenellus KU2346CDSC-tenellus_contig832 9207..9318 +
1680790097.9673474-CDS-C-tenellus_contig832:9744..98251680790097.9673474-CDS-C-tenellus_contig832:9744..9825Choristocarpus tenellus KU2346CDSC-tenellus_contig832 9745..9825 +
1680790097.976125-CDS-C-tenellus_contig832:9964..101231680790097.976125-CDS-C-tenellus_contig832:9964..10123Choristocarpus tenellus KU2346CDSC-tenellus_contig832 9965..10123 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig832.1.1

>prot_C-tenellus_contig832.1.1 ID=prot_C-tenellus_contig832.1.1|Name=mRNA_C-tenellus_contig832.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=273bp
SWTNIQFNEVTIGERIGGGAVGIVQKGWYKGREVALKTLFNCRVDDAVIQ
EYMDELNVLSQLDHPNIVGLLGACVEPPNLFFVMELCLHSLFHLLHECRR
SLSTKEILHMALDVTKAMSYLHAHRPPIIHRDLKSLNLLQSKEGGPLKLC
DFGLVRTKVTSAGTPAYMAPELLENRPFNKSVDVYAFGFLLWEMFSSEVP
FRGYELSDIREAVLSGTRPKVPRGECPEIIRYLISRSWAEDQAQRPEFEE
ILTALEKTLNEIPDATHLEVSY*
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mRNA from alignment at C-tenellus_contig832:7095..10123+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig832.1.1 ID=mRNA_C-tenellus_contig832.1.1|Name=mRNA_C-tenellus_contig832.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3029bp|location=Sequence derived from alignment at C-tenellus_contig832:7095..10123+ (Choristocarpus tenellus KU2346)
AGCTGGACCAATATTCAGTTCAATGAGGTCACCATCGGGGAGCGCATAGG CGGTGGGGCGGTGGGGATCGTTCAGAAAGGCTGGTACAAGGGGCGCGAAG TTGCACTGAAAACCTTGGTGAGAGGAAGCTGAGAAAGCTCGGTGTTGTTT GTCACTTTTCACATTACACATTCTAAGAATACCCTACAATCAATCGGCTC CATCTGCAATTCAAGATCCATGTCTGTAGATCGCAATATTCGACGACAAC ATCTTCTTTTTTGTTCCCTTGGCCAGTTCAACTGTCGGGTTGATGATGCA GTCATTCAGGAGTACATGGATGAACTCAATGTTCTCAGGTATGCTTCGAA TGTATAAACATTAAAAGGGATCTTATCACAACCAGCCAGGCCAGGCATGG TTTTGGTTCCAAACAAACAGGTTTTATATAAGTTTTCATTGCTTTTGTTC AACTGGTTTCGTGTGTATGTGTATCATGAGTAATTTCCTTGATCTAATGT TACTCTACCTGAAATTTTCTCTCATTAGAAAAAATGGTGATATGTCACCA TTTTTTCTGTGCAAGCTTCGATTACAGTCCATTGATTCCTCCGAGAATTA GTTCCCTTGGATAGGACAGAGTTTTAGTGGAGCAAGGTTGATTGGCTCAA AGTAGAGAAATAATTTCCACTCACTGGCAGCAACTCCAATAACCACGTGA CATTCTACCTTCATGAAAAACATGTTGTCAACAAACATTGGACGACAGTC AACTGGACCACCCCAACATAGTTGGTCTCCTTGGCGCATGTGTGGAACCT CCTAATCTCTTCTTCGTGATGGAGCTGTGCCTACATTCCCTCTTCCACTT GCTGCATGAGTGTCGACGCAGCCTTAGCACCAAAGAAATATTGCACATGG CGGTGAGACATGCTCAAAACTCCTACTGGGATGGTGCTGCCCAAGGCATT TCCGAACGTCCGTATTGAAATTTGTTAACAAGCTGCTGTGTACATTCGAT GTAGGTCATGCCACATATTACAATATGCACACTGGGTGCACTCCTCCTTG TTTCTCTGGATCGTTTTTCATTGCATCTTTACCACTGGGATTTGAAATGC AGTTGATTCCCTTAATCCCATTTTCTCTTCCTGCCTGGTTGGAAGCGGTG AAGGTACAATTATCTCCTGTAATCATGCCCCACTAACCACATTACTTCCC ACTTGCCTCCAGCTAGATGTGACCAAGGCAATGTCCTACCTTCATGCGCA TCGGCCCCCAATAATTCACCGAGATCTCAAGAGTCTGAACCTGCTGCAGT CAAAGGAAGGAGGACCGCTCAAGCTGTGCGACTTTGGTCTTGTAAGGTGC TTGAATAATTTAGTCTTTGCTTATTCTGGGAGAGCAGCTGGTAGGAAGTC AAACATTGCTTAAGGCACTCCTATAGAGTACTAGCAGGGAGTGTGTCAGT TCCATTAGCAATAGGTTTTCTGGCTTGAAGTATCTGGGGGGGGTGGGGGG GGTGGCTGTCTATTTGGAGCCCATTTTTGCCTGTCGCGATTTTTTGGTGG TTTGGTTGCCTCCGCTGGATGGATAATGTAAGCACACTTCTCCTGGTCAG GGCTCGAATGGACACCCAGGTGTAGATTCCCCCCCCCCCCCCCCCCCCCC CGCCGTTAATCCCCTCCCAGATACTTTGAGCCTCTGCAGTACAGTATACT ATGCCACATCCTCCAGAGTTCTTTGAAACACATATAACGAGTGCTAGTAG TATGTACGTGCTACTGCCCCAACTAGTTTAGACTATAATCAGAGCTTGTG AAGCAACACCTATTTTTCAGGTATGCAGCAGGCACCTTTAACAAGCCAGC TCTCTCTCACACACATATATTCAGGGTTTCAGTAGTTCACTCTGCACAGA AACGTGGCAATAAGTCCTTCAAAGTGCGAGCAATATTTTATATTCCTACT ACATCCTATTTTTCTTATTAATATAATTCCTATGTACTTCCGAATGCATA TTATACACCTCAGTTCCCAGAGAACAGACATCTCAAAGTTAGTTTACCCC ATGGACCTGACTATTCCGTGTAACATCCTGTTCCGTCCTCTCCCATAATT TGATGTGTAAAGGACCAAAGTCACATCAGCTGGTACCCCAGCATACATGG CACCAGAGCTTCTTGAGAATCGCCCATTCAACAAGAGTGTCGATGTCTAT GCCTTTGGGTTCCTACTGTGGGAGGTGAAGTTGACCCTTTATTTGTGTGC GGCATCAGGAAGCCAAGTTGGTGGTCCAAGAAATGCACTCTTCCTATGTT TCCAGTTTGCAGCGGAGGACTGTAGTGCTGTGTGTGTTTTGACCCCGGGT CACACAGCACAGGGCCTACAGAAGAAGTCTCCAAGCCCATCTTGCATGCA TTGTTTTCACTGCCTTATATCCTTCTTTTTTCCTTGGAGGTATACTGCAT ACTTTGAAGCAATGTTGTCATGCTTGAGTCTTGATTAGGGCCACCAAGGC TGTTGCAGGGAGCTATGACTTTCTGGCACAATACCTCCTTCTCGCGTACC TCTTTGTACAGTTCCCTGTTGTACATCAAATTTCTATCGAATTTTCTGGC AGCAACTGTCTACATCACCACCTGAACTCATCCACCCACCATCTGAAAAG ATGTTCTCCTCTGAGGTGCCCTTTCGAGGCTACGAGCTCTCTGACATCCG GGAGGCTGTGCTTAGCGGGACCCGACCAAAGGTACTTGATCTGCTCTTTT GTGGGTGTGATTTGTGCATCATGCAAGATAGATTTGTGTGCTTCCAATCA CAAAGCAGATTGCCATCACATGAAGTTGACAATCAATACGAGGAGCTCCA AACTGTGCTTTTTCTTTTAGGTTCCTCGAGGGGAGTGCCCAGAAATTATC CGGTACCTCATTTCCCGGAGCTGGGCAGAAGACCAGGCACAACGGCCAGA GTTTGAAGAGATATTGACAGCTTTGGAGAAGACTTTGAATGAGATACCAG ATGCCACGCACTTAGAGGTGAGCTATTAA
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Coding sequence (CDS) from alignment at C-tenellus_contig832:7095..10123+

>mRNA_C-tenellus_contig832.1.1 ID=mRNA_C-tenellus_contig832.1.1|Name=mRNA_C-tenellus_contig832.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=819bp|location=Sequence derived from alignment at C-tenellus_contig832:7095..10123+ (Choristocarpus tenellus KU2346)
AGCTGGACCAATATTCAGTTCAATGAGGTCACCATCGGGGAGCGCATAGG
CGGTGGGGCGGTGGGGATCGTTCAGAAAGGCTGGTACAAGGGGCGCGAAG
TTGCACTGAAAACCTTGTTCAACTGTCGGGTTGATGATGCAGTCATTCAG
GAGTACATGGATGAACTCAATGTTCTCAGTCAACTGGACCACCCCAACAT
AGTTGGTCTCCTTGGCGCATGTGTGGAACCTCCTAATCTCTTCTTCGTGA
TGGAGCTGTGCCTACATTCCCTCTTCCACTTGCTGCATGAGTGTCGACGC
AGCCTTAGCACCAAAGAAATATTGCACATGGCGCTAGATGTGACCAAGGC
AATGTCCTACCTTCATGCGCATCGGCCCCCAATAATTCACCGAGATCTCA
AGAGTCTGAACCTGCTGCAGTCAAAGGAAGGAGGACCGCTCAAGCTGTGC
GACTTTGGTCTTGTAAGGACCAAAGTCACATCAGCTGGTACCCCAGCATA
CATGGCACCAGAGCTTCTTGAGAATCGCCCATTCAACAAGAGTGTCGATG
TCTATGCCTTTGGGTTCCTACTGTGGGAGATGTTCTCCTCTGAGGTGCCC
TTTCGAGGCTACGAGCTCTCTGACATCCGGGAGGCTGTGCTTAGCGGGAC
CCGACCAAAGGTTCCTCGAGGGGAGTGCCCAGAAATTATCCGGTACCTCA
TTTCCCGGAGCTGGGCAGAAGACCAGGCACAACGGCCAGAGTTTGAAGAG
ATATTGACAGCTTTGGAGAAGACTTTGAATGAGATACCAGATGCCACGCA
CTTAGAGGTGAGCTATTAA
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