mRNA_C-tenellus_contig8295.3.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig8295.3.1
Unique NamemRNA_C-tenellus_contig8295.3.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig8295.3.1 vs. uniprot
Match: A0A6H5JPI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 3.880e-66
Identity = 167/465 (35.91%), Postives = 249/465 (53.55%), Query Frame = 3
Query:  354 GDGTLF-IILSFIFVAYILHPIVAKALARVRAHMGWVAIKHRRQSVEVTHYPLEAEVMGDRGNCNFARIATLLLALFSISSLGLELTMDLAFETGGPVDLLNRPPPVLERGENNDG----KIWFITRMDNSTAIEGKRGNFKDTYSSGYAVGFYRVGRHGNVGIGDREVEGNAVISRWSNNFLTETTPDLYYNRKNHS--VKGIDCTGDSLKNGTVQLDKDANHWGTATECVNGPALPSRSGVE--SPPTIILRNKNPHGSTYLVVEEDTSYPSFLYSVWRASGA----TTLLPVFYISSSYRLVEAIVTGIVNGVKTEGRDEITGGDCFALLTYWSLNNLDYP--EGIRISPFGEHPDNNIGVVQHLNVVESIEAGVEVTSLTAVFGVVVLALSLGAIAGWLC--SSSPVDIYNPYELISHLNLPTDKDGSVDSDLGKLRIFVEYVKNNHINVEVIKDIGRRNG 1697
             D   F I L  + ++ +LHPIV     R+RA++ W +I+ +R  VEVT Y + +E +GDRG  + AR+ T+LLA F +S+ GLEL++DLA  T GPVDLLNRPPP++ R +  D       W + R + +    G   + + T   G A   YR        IG+  + GN V + WS    +     L+Y+  N    V  I C+  S         ++++ WG  +EC +GP+L + S  +  SPP I+L +    G  YL+VEE++SYPSFLYSVW           L   FY+SS+ RLVEAIV+G              GG C  +LT +S+ N  Y     +R+SPFGEHP ++   V+ L+ VE I  GV V+ +  V GV+++ ++  A AG LC  S   +D+Y+  +LI  ++LP+ +    D     L+I+V   +NN  ++ +I D G   G
Sbjct:    9 SDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRP-VEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPIVFRTQVVDVAHNFSDWIVIRNEEAIVEGGSLDHIRGTLVDGNATTTYR--------IGESIIRGNTVFASWSPQ-SSRIASGLFYDIDNGQAIVSEIACSTPSRTGSLYITAEESSKWGDVSECESGPSLVNASANDRASPPVILLNSTE--GEAYLIVEEESSYPSFLYSVWVPGEVKPQEAQLNHAFYVSSTTRLVEAIVSGXXXXXXX-------GGGCLDMLTKFSVQNATYSLNGALRVSPFGEHPSSSS--VERLDQVEPIVVGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGE--GADGKPVALKIYVRQERNNGFSI-IISDDGVYRG 449          
BLAST of mRNA_C-tenellus_contig8295.3.1 vs. uniprot
Match: D7FRU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 1.870e-65
Identity = 175/479 (36.53%), Postives = 262/479 (54.70%), Query Frame = 3
Query:  327 RMWTIRLRKG-DGTLFIILSFIFVAYILHPIVAKALARVRAHMGWVAIKHRRQSVEVTHYPLEAEVMGDRGNCNFARIATLLLALFSISSLGLELTMDLAFETGGPVDLLNRPPPVLERGENNDGKI--W-FITRMDNSTAIEGK-RG----NFKDTYSSG--YAVGFYR--VGRHGNVGIGDREVEGNAVISRWSNNFLTETTPDLYYNRKNHSVKGIDCTGDSLKNGTVQLDKDANHWGTATECVNGPALPSRSGVESPPTIILRNKNPHGSTYLVVEEDTSYPSFLYSVWRASGATT--LLPVFYISSSYRLVEAIVTGIVNGVKTEGRDEITGGDCFALLTYWSLNNLDYPEGI-RISPFGEHPDNNIGVVQHLNVVESIEAGVEVTSLTAVFGVVVLALSLGAIAGWLC--SSSPVDIYNPYELISHLNLPTDKDGSVDSDLGKLRIFVEYVKNNHINVEVIKDIGR-RNGWDR 1706
            + W + L  G DGTL I  +F+ +AY LHP +  A  R+RA+  W  I+ +RQ+VEVT Y L AEV G RG+ + AR   ++LA+FS++S GLEL+MDLA    G  DLLNRPPPV  R E ND     W  +T  D      G  RG    N +DT+++   Y V   R  +G+       D  + G  +++ W      +  P L+Y+    +V  ++C+G++LK+  V L  D   WG A +C  GP     +   SPP ++L N +  G   ++VEE +SYP+FLYSVW A G+ +  L  +F++ S+ RLVEA++TGIV+G       E  GG CF LL  +S   ++Y +G+ R SPFGE P  +  +VQ L   E+IEAGVE+     V  + V+A +   +   +C  +S  +D+Y+  EL+  ++L         ++   +RIFV    + HI V +     + +  W+R
Sbjct:   11 KTWVLPLADGFDGTLTIGWTFVLLAYFLHPAIEWAFHRLRAYRAWRCIQ-KRQAVEVTSYNLMAEVFGGRGSWDSARNIAVILAVFSLASWGLELSMDLA-SLEGEADLLNRPPPVFLRPETNDTNTDPWQVLTLSDIDPDYNGNWRGLEHLNVEDTHANSRYYIVKDTRDYLGKTAK----DTFINGEILVASW------DDKPSLFYDINGANVDSLECSGETLKDAEVYLGTDL--WGNALDCERGPRPTGLT--TSPPAVVLTNGD-SGLVSVIVEESSSYPTFLYSVWTAEGSDSVELAYLFHVHSTVRLVEAVITGIVHG-------ETEGGACFGLLRVFSETRVEYEDGLDRASPFGEIPTGDTVLVQDL---ETIEAGVEINMNALVCLLWVMASTAVCVVWLICLRNSIGMDVYDRDELLRAVSLQGHASRDPAAEHPAIRIFVRREDSGHITVFINDSHDKEQRAWER 462          
BLAST of mRNA_C-tenellus_contig8295.3.1 vs. uniprot
Match: D7FRU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU0_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 6.000e-51
Identity = 162/440 (36.82%), Postives = 235/440 (53.41%), Query Frame = 3
Query:  333 WTIRLRKGDGTLFIILSFIFVAYILHPIVAKALARVRAHMGWVAIKHRRQSVEVTHYPLEAEVMGDRGNCNFARIATLLLALFSISSLGLELTMDLAFETGGPVDLLNRPPPVLE-RGENNDGKI-WFITRMDNSTAIEGK-RGN-------FKDTYSSGYAVG---FYRVGRHGNVGIGDREVEGNAVISRWSNNFLTETTPD--LYYNRKNHSVKGIDCTGDSLKNGTVQLDKDAN----HWGTATECVNGPALPSRSGVESPPTIILRNKNPHGSTYLVVEEDTSYPSFLYSVWRASG---------ATTLLPVFYISSSYRLVEAIVTGIVNGVKTEGRDEITGGDCFALLTYWSLNNLDYPE-----GIRISPFGEHPDNNIGVVQHLNVVESIEAGVEVTSLTAVFGVVVLALS-LG-AIAGWLCSSSPVDIYN 1547
            WT+     D TL I LSFIF+AYILHP +  A  RVRA+  W  I+ ++Q V+VT Y + +E+   RG  + AR+ TLLL  FS++S  LEL+MDL      P  LL +PPPV +   EN++G++ W +  +   T I+ + +GN       F+    S Y V    +Y   +       DR ++G  +++ WS     E  PD  +Y       V GI C+ +  ++ T    ++A      WGT  EC  GP + + +G +S P+IIL   +  G T+++VEE + +PSFLYSVW A+G         +  +   F+I+S+ RL EA+VTGIVNGV   G     GG CF LL  +S  + D PE       + +PFGE P+N  G V  LN VE I  GV + +   V  V +L LS +G  +  +L S   +DIY+
Sbjct:   13 WTMPTGGVDSTLAIGLSFIFLAYILHPAIEAAYQRVRAYHAWRCIE-KQQRVDVTTYLMLSELFAGRGRWDAARVITLLLLAFSLASWILELSMDLN-PVDNPAHLLTQPPPVFKWDAENDNGEVPWHVLNL---TEIDSEYQGNWWKLPNVFETFAKSRYYVQNDTYYAWSKRK-----DRYIDGEIIVASWS----PEEKPDSLIYGQSATVMVDGITCSSNGTRDDTTVTRRNATDHIEEWGTVLECDRGPGITNGTG-KSKPSIIL-TAHDGGDTHVIVEETSKHPSFLYSVWNATGDSITAAGDSSVEIAYAFHIASTVRLAEAVVTGIVNGVAGGG-----GGACFGLLRAYSKGS-DTPEFEEYGTEKATPFGEDPEN--GAVDSLNEVEIINTGVMMNANAMVAFVWLLVLSFIGFGMTFFLRSKIDMDIYD 428          
BLAST of mRNA_C-tenellus_contig8295.3.1 vs. uniprot
Match: A0A6H5JST2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST2_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 1.150e-48
Identity = 167/483 (34.58%), Postives = 252/483 (52.17%), Query Frame = 3
Query:  357 DGTLFIILSFIFVAYILHPIVAKALARVRAHMGWVAIKHRRQSVEVTHYPLEAEVMGDRGNCNFARIATLLLALFSISSLGLELTMDL-AFETGGPVDLLNRPPPVLERGENNDGKI-WFITRMDNSTAIEGKRG--------NFKDTYSSG--YAVGFYRVGRHGNVGIGDREVEGNAVISRWS-------NNFLTETTPDLYYNRKNHS--VKGIDCTGDS-LKNGTV--QLDKDANHWGTATECVNGPALPSRSGVESPPTIILRNKNPHGS--TYLVVEEDTSYPSFLYSVWRASGATTLLP-VFYISSSYRLVEAIVTGIVNGVKTEGRDEITGGDCFALLTYWSLN----NLDYPEGIRISPFGEHPDNNIGVVQHLNVVESIEAGVEVTSLTAVFGVVVLALSLGAI--AGWLCSSSPVDIYNPY-----ELISHLNLPTDK-DGSVDSDLGKLRIFVEYVKNNHINVEVIKDIGR 1688
            DGT  I LSFI +AY+LHP+V +A  RVRA+  W AI++ R  VEVT Y    E++  RG  +  RI T+LL +F+++S  LEL +DL +FE       L +PPPV    EN  G   W +  +D     + K          N  +T +    Y   F R      V   ++++ G+ +++ W        N F  E      Y  K  +  V+ +DC+    LK+  V  +++  +  WG   EC  GP LP+ S  ++ P IIL     HG+  T++++EE T++ SFLYSVW+ +G +  L   F+I+S+ RL EA+VTGIV G       E TGG CF +L  +S        +Y E I+  PFGE+P +  G VQ L  VE+IEAG+++        V VL+L++  +  A +L  S+ +DIY+ +     ELI  ++L   + +    ++  K+RIFV    N  I+V  I D G+
Sbjct:   32 DGTRAISLSFIVLAYVLHPLVIQAYHRVRAYRAWRAIENGRV-VEVTAYSDREEILRGRGVWDATRIVTVLLVVFNVASWVLELMLDLYSFENEAYP--LTQPPPVYR--ENIQGNASWQVLNLDEINGEDRKYDGSSWFDLPNVSETEAKSLYYVENFKRSAWSDGV---EKDISGDIIVANWDPAIAGSLNFFFGENILSRSYEEKTATAVVEAVDCSSSGRLKDAPVYRKINNKSEEWGRVVECEVGPRLPNGSE-QAQPAIILTQ---HGTNETHVIIEETTTFLSFLYSVWKTNGESVNLSYAFHIASTVRLAEAVVTGIVLG-------ESTGGGCFGMLRAFSRGPNPPEDEYGEMIKALPFGENPQS--GKVQKLTDVETIEAGIDINVAAMSCLVCVLSLTVVGVVWAVYLGRSTGMDIYDRWGTAWDELIRAVSLQGQRRELDPAAEHSKIRIFVRREDNGSISV-AISDTGQ 492          
BLAST of mRNA_C-tenellus_contig8295.3.1 vs. uniprot
Match: D8LC87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC87_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 3.660e-45
Identity = 170/493 (34.48%), Postives = 239/493 (48.48%), Query Frame = 3
Query:  288 ALTEYSSCAAKQSRMWTIRLRKGDGTLFIILSFIFVAYILHPIVAKALARVRAHMGWVAI-KHRRQSVEVTHYPLEAEVMGDRGNCNFARIATLLLALFSISSLGLELTMDLAFETGGPVDLLNRPPPVLERGENNDGKIWFITRMDNSTAIEGKRGNFKDTYS-----SGYAVGFYRVGRHGNVGIGDREVEGNAVISRWSNNFLTETTPDLYYNRKNHS--VKGIDCTGDSLKNGTVQLDKDANHWGTATECVNGPALPSRSGVESPPTIILRNKNPHGSTYLVVEEDTSYPSFLYSVWRASGATT--LLPVFYISSSYRLVEAIVTGIVNGVKTEGRDEITGGDCFALLTYWSLNNLDYPEGI--------RISPFGEHPDNNIGVVQHLNVVESIEAGVEVTSLTAVFGVVVLALSLGAIAGWLC--SSSPVDIYNPYELISHLNLPTDKDGSVDSDLGKLRIFVEYVKNNHINVEVIKDIGRRNGWDR 1706
            AL+E  S  +  S+ W   L   + T  I LSF+F+AY LHP +     +VRA   W A+ KH+R  V+VT YP+ +EV   RG  + AR  TLLLA FS+ S  LEL++++    GG   LLN P P+     N     W +  ++      G+     D        S Y V  YR   H      +  V+G  V++ W  +   +    LYY   NH+  V  I C G     G V L  +A  WG+   C  GP   +++   S P IIL      G   ++VEE  ++PSFLYSVW A  A +  L   F+ISS+ RL EA+VTGIVNG       E  GG CF LL  ++    D  EGI        R  PFGE P+++   V  L  VE+IE GV + +   V  V +L LSL  I   +C  SS  +D+Y+  EL+  ++     + +  S    +RI+V+  +   +NV +      +NG  R
Sbjct:    3 ALSEVLS--SNGSKKW--HLPTQEPTFAIGLSFVFLAYFLHPRIEATYQKVRAARAWRAVEKHKR--VDVTTYPMVSEVFRGRGKWDAARAVTLLLAAFSLGSWVLELSLEIDHVEGG-ARLLNLPVPIYL--VNQTSLAWQVMPLEEINPEYGRAWRDLDNMEEKQAKSTYFVTGYR--EHAWSKKIETHVDGEIVVASWDPD--DKHRAGLYYG-SNHTATVDSITCKGTG---GDVYLYDEAA-WGSFLWCGEGPLAENKTS--SQPVIILEKSE--GEVSVIVEEVGTHPSFLYSVWTAGSADSKELAYSFHISSTVRLAEAVVTGIVNG-------ETGGGPCFGLLRTFNAGR-DMEEGISTGEEERERAKPFGEKPEDD--KVDSLQDVETIEVGVLMNTNALVAFVCLLVLSLVGIGWSMCLESSVEMDVYDRDELLRAISQQAQGEDNDPSTRSDMRIYVQKERGGELNVVISASDDDQNGCAR 463          
BLAST of mRNA_C-tenellus_contig8295.3.1 vs. uniprot
Match: D7FRT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT6_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 4.880e-45
Identity = 158/477 (33.12%), Postives = 248/477 (51.99%), Query Frame = 3
Query:  357 DGTLFIILSFIFVAYILHPIVAKALARVRAHMGWVAIKHRRQSVEVTHYPLEAEVMGDRGNCNFARIATLLLALFSISSLGLELTMDLAFETGGPVDLLNRPPPVLERGENNDGKIWFITRMDNSTAIEGKRGNFKDTY------SSGYAVGFYRVGRHGNVGIGD---REVEGNAVISRW--------SNNFLTETTPDLYYNRKNHSV-KGIDCTG--DSLKNGTV--QLDKDANHWGTATECVNGPALPSRSGVESPPTIILRNKNPHGSTYLVVEEDTSYPSFLYSVWRASG-ATTLLPVFYISSSYRLVEAIVTGIVNGVKTEGRDEITGGDCFALLTYWSLNNLDYPEG------IRISPFGEHPDNNIGVVQHLNVVESIEAGVEVTSLTAVFGVVVLALSLGAI--AGWLCSSSPVDIYNPYELISHLNLPTDKDGSVD--SDLGKLRIFVEYVKNNHINVEVIKDIGR 1688
            DGT  I LSFI +AY LHP+V  A  RVRA+  W AI+  R +VEVT Y    E++  RG  +  RI T+LL +F+++S GLEL +D  +        L +P PV  +  +N+ + W +  +D    I G+  ++  ++      S   A   Y V         D   +++ G  +++ W        S +F    +   Y      +V + ++C+   D LK+  V  +++  +  WG   EC  GP L +  G ++ P IIL  +N    T++++EE T++ SFLYSVW+ +G + TL   F+I+S+ RL EA+VTGIV G       E +GG CF +L  +S    + PE       ++  PFGE+P +  G V+ L  VE+IEAG+++        V VL+L++  I  A +L  S+ +DIY+  ELI  ++L      +VD  +   ++RIFV    N  I+V  I D G+
Sbjct:   32 DGTRAIGLSFIGLAYFLHPLVVWAYHRVRAYRAWRAIEKGR-AVEVTAYSNREEILRGRGVWDATRIVTVLLVVFNVASWGLELMLD-QYSHENEACPLTQPSPVYRKDLDNNAR-WQVLNLDE---INGEDRDYNGSWLDLPNVSKTEAKSLYYVENFKRSAWSDPVEKDISGEIIVANWDPAIAESLSFSFGESISSGSYEEGTATAVVEAVNCSSSSDPLKDAPVYRKMNNKSEEWGRVVECEAGPRL-ANGGEQAQPAIIL-TQNGTNETHVIIEETTTFLSFLYSVWKTNGDSVTLTYAFHIASTVRLAEAVVTGIVLG-------ESSGGGCFGMLRAFS-RGPEPPEDEYAKMMVKALPFGENPQS--GKVEKLTDVETIEAGIDINVAAMTCLVCVLSLTVVGIVWAVYLGRSTGMDIYDRDELIRAVSLQ-GHGRAVDLAAQHSRMRIFVRREDNGGISV-AISDTGQ 488          
BLAST of mRNA_C-tenellus_contig8295.3.1 vs. uniprot
Match: D7FRT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT9_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 9.250e-45
Identity = 155/458 (33.84%), Postives = 228/458 (49.78%), Query Frame = 3
Query:  324 SRMWTIRLRKGDGTLFIILSFIFVAYILHPIVAKALARVRAHMGWVAIKHRRQSVEVTHYPLEAEVMGDRGNCNFARIATLLLALFSISSLGLELTMDLAFETGGPVDLLNRPPPVLE-RGENNDGKIWFI---TRMDNSTAIEGKRGNFKDTYSSGYAVGFYRVGRHGNVGIG---DREVEGNAVISRWSNNFLTETTPD--LYYNRKNHSVKGIDCTGD-------------SLKNGTVQLDKDANHWGTATECVNGPALPSRSGVESPPTIILRNKNPHGSTYLVVEEDTSYPSFLYSVWRASGATT----------LLPVFYISSSYRLVEAIVTGIVNGVKTEGRDEITGGDCFALLTYWS---LNNLDYPEGI---RISPFGEHPDNNIGVVQHLNVVESIEAGVEVTSLTAVFGVVVLALSLGAIAG--WLCSSSPVDIYNPYELISHLNL 1577
            SR W +     + TL I L++IF+AY++HP    A  RVRA+  W  I+   + V+VT+YP   E++G+ G  + AR+  LLL LF+++S  L+L++D+ F    P       P V +    N+ G  W +   T +D     EG   N  + + +  A   Y V  + N       DR + G+ +++ WS N    T PD  +Y  R    V GI C+               +LKNGT  ++     WGT  EC  GPA     G  S P+IIL  +   G T+++VEE +S PSFLYSVW A+GA+           +   F+ISS+ RL EA+VT IVNGV  EG     GG CF LL  ++    + +D+ +     +  PFGE P ++   +  L   E I  GVE+ +   V   +V+ LS   I    +LC    +D+YN  EL+  +NL
Sbjct:    8 SRKWDLPTGTMNTTLVIGLAYIFLAYVVHPATQYAYLRVRAYRAWRRIEEGER-VDVTNYPTWMELLGNCGRRDTARVVALLLLLFALASWILDLSIDV-FPVPNPAYSQTLAPQVFKWPASNSTGASWHVLSLTEIDQE--YEGDWLNQPNVFET-VAKSRYYVKEYKNYVWSEPKDRYINGDIIVANWSRN----TKPDNLVYGERATVMVDGITCSSGGEADIFTDDPIPVTLKNGTDAIEV----WGTVLECDQGPAGIDVIG-SSKPSIILTERET-GDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGEG-----GGACFGLLRAYNRGPYDTVDFSDSYGKQKAMPFGEDPVSHY--INSLKDNEHIIVGVEMNTNGMVAFALVIGLSFTGIVLTLFLCPKYEMDVYNRDELLRAINL 443          
BLAST of mRNA_C-tenellus_contig8295.3.1 vs. uniprot
Match: A0A6H5JMP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP8_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 4.460e-44
Identity = 158/495 (31.92%), Postives = 234/495 (47.27%), Query Frame = 3
Query:  324 SRMWTIRLRKGDGTLFIILSFIFVAYILHPIVAKALARVRAHMGWVAIKHRRQSVEVTHYPLEAEVMGDRGNCNFARIATLLLALFSISSLGLELTMDLAFETGGPVDLLNRPPPVLERGENNDGKI-WFITRMDN-STAIEGKRGNFKDTYSSGYAVGFYRVGRHGNVGIG---DREVEGNAVISRWSNNFLTETTPD--LYYNRKNHSVKGIDCTG--------DSLKNGTVQLDKDANHWGTATECVNGPALPSRSGVESPPTIILRNKNPHGSTYLVVEEDTSYPSFLYSVWRASGATT----------LLPVFYISSSYRLVEAIVTGIVNGVKTEGRDEITGGDCFALLTYWSLNNLDYPEGIRI------SPFGEHPDNNIGVVQHLNVVESIEAGVEVTSLTAVFGVVVLALSLGAIAG--WLCSSSPVDIYNPYELISHLNLPTDKDGSVDSDLGKLRIFVEYV-KNNHINVEVIKDIGRRNGWDR 1706
            SR W +     + TL I L++IF+AY++HP    A  RVRA+  W  I+   + V+VT YP   E++G     + AR+  LLL LF+++   LEL++D  F    P      PPPV +    N     W +  ++  +   EG   N  + + +  A   Y V  + N       DR + G+ +++ WS N    T PD  +Y       V GI C+         D     T+        WGT  EC  GPA+    G  S P+IIL  +   G T+++VEE +S PSFLYSVW A+GA+           +   F+ISS+ RL EA+VT IVNGV  +G     GG CF LL  ++    D  +   +       PFGE P ++   +  L  +E+I  GVE+ +   V   +V+ LS   IA   +LC    +DIYN  EL+   NL         S    +RI V+   ++ H+ + + +    R+G  R
Sbjct:    8 SRKWELPTGTMNTTLVIGLAYIFLAYVVHPTTKYAYLRVRAYRAWRRIEEGER-VDVTDYPTWMELLGGCARRDTARVVALLLLLFALALWYLELSIDW-FPVSVPAYSQTLPPPVFQWSAGNSTPTPWHVLSLNEIAPEYEGDWLNQPNVFET-VAKSRYYVKEYKNYPWSEPKDRYINGDIIVANWSRN----TKPDNLVYGENATVMVDGITCSSGGKAQTFTDDPIPVTLNRTNGIEEWGTVLECDQGPAVVEVIG-NSKPSIILTERET-GDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGDG-----GGACFGLLRAYNRGPYDTRDFSALYGKQKARPFGEDPVSHY--IYSLKDIENIIIGVEMNTNGMVAFALVIGLSFIGIALTLFLCPKYEMDIYNRDELLRATNLQAQGLPDDPSRHSAMRIEVQREDRSRHLTITISESDSERSGCAR 486          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8295.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JPI8_9PHAE3.880e-6635.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRU1_ECTSI1.870e-6536.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FRU0_ECTSI6.000e-5136.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JST2_9PHAE1.150e-4834.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LC87_ECTSI3.660e-4534.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRT6_ECTSI4.880e-4533.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRT9_ECTSI9.250e-4533.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMP8_9PHAE4.460e-4431.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8295contigC-tenellus_contig8295:2803..5532 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2730
Hectar predicted targeting categorysignal anchor
Exons1
Cds size1860
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790094.3570552-UTR-C-tenellus_contig8295:2802..35291680790094.3570552-UTR-C-tenellus_contig8295:2802..3529Choristocarpus tenellus KU2346UTRC-tenellus_contig8295 2803..3529 -
1680790094.379229-UTR-C-tenellus_contig8295:5389..55321680790094.379229-UTR-C-tenellus_contig8295:5389..5532Choristocarpus tenellus KU2346UTRC-tenellus_contig8295 5390..5532 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790094.3672602-CDS-C-tenellus_contig8295:3529..53891680790094.3672602-CDS-C-tenellus_contig8295:3529..5389Choristocarpus tenellus KU2346CDSC-tenellus_contig8295 3530..5389 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8295.3.1prot_C-tenellus_contig8295.3.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig8295 3530..5389 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig8295.3.1

>prot_C-tenellus_contig8295.3.1 ID=prot_C-tenellus_contig8295.3.1|Name=mRNA_C-tenellus_contig8295.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=620bp
MPNLLLLNIRVAHSSNSCFSIDAPCAVLLIPPSDLLSRMDRCDGMFVYAL
TEYSSCAAKQSRMWTIRLRKGDGTLFIILSFIFVAYILHPIVAKALARVR
AHMGWVAIKHRRQSVEVTHYPLEAEVMGDRGNCNFARIATLLLALFSISS
LGLELTMDLAFETGGPVDLLNRPPPVLERGENNDGKIWFITRMDNSTAIE
GKRGNFKDTYSSGYAVGFYRVGRHGNVGIGDREVEGNAVISRWSNNFLTE
TTPDLYYNRKNHSVKGIDCTGDSLKNGTVQLDKDANHWGTATECVNGPAL
PSRSGVESPPTIILRNKNPHGSTYLVVEEDTSYPSFLYSVWRASGATTLL
PVFYISSSYRLVEAIVTGIVNGVKTEGRDEITGGDCFALLTYWSLNNLDY
PEGIRISPFGEHPDNNIGVVQHLNVVESIEAGVEVTSLTAVFGVVVLALS
LGAIAGWLCSSSPVDIYNPYELISHLNLPTDKDGSVDSDLGKLRIFVEYV
KNNHINVEVIKDIGRRNGWDRISFEAAELALCCSGFSQATSTNKMWLMPL
KDLRGASDNELRAFTWNDGSARKLPGARRNGASDFSRLTKGRLFFPAQVT
TDHEAEVGNTSHATASISP*
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mRNA from alignment at C-tenellus_contig8295:2803..5532-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig8295.3.1 ID=mRNA_C-tenellus_contig8295.3.1|Name=mRNA_C-tenellus_contig8295.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2730bp|location=Sequence derived from alignment at C-tenellus_contig8295:2803..5532- (Choristocarpus tenellus KU2346)
AACTTCAGTTGTTGATAAAAACTATTGTTCAATGCCTTGATTTAGGAAAG GAAGGAAGACCGAGGTGAGTGGTTCTTTCCCCTGGAATGCCTGACTTGGT TTGACAAGCCAGTTTTCTCGCTGTTCTCCCTGAGTTCGTAGTTATGCCAA ATCTTTTGCTTCTCAATATTCGTGTAGCACACTCTTCCAACTCATGTTTT TCTATCGATGCCCCTTGTGCCGTGCTACTCATCCCACCTTCCGATCTGCT CTCACGAATGGATCGGTGTGATGGAATGTTTGTTTACGCTCTTACAGAAT ATTCGTCGTGCGCAGCTAAGCAGTCTAGAATGTGGACCATTAGACTCCGC AAAGGTGATGGTACATTATTCATCATCTTGTCTTTCATCTTCGTTGCGTA CATACTCCACCCGATTGTGGCAAAGGCTCTTGCACGTGTTAGGGCTCATA TGGGTTGGGTGGCGATCAAACATCGACGGCAGTCAGTGGAAGTAACGCAC TATCCTCTGGAAGCGGAAGTTATGGGAGACCGGGGAAACTGTAACTTTGC ACGAATCGCAACTCTGCTGCTGGCCTTATTTTCTATTTCGTCCTTGGGGT TGGAACTGACAATGGATCTCGCTTTTGAAACTGGTGGCCCAGTAGACCTA CTGAATCGTCCTCCCCCAGTGCTTGAGCGTGGTGAGAACAACGACGGAAA GATTTGGTTTATCACTCGTATGGATAACAGTACTGCTATAGAGGGAAAGA GGGGCAATTTCAAGGACACATACAGCAGCGGTTACGCCGTGGGATTCTAC AGAGTCGGTAGACATGGAAATGTGGGGATTGGTGATCGTGAAGTTGAGGG AAATGCAGTCATCTCTCGGTGGTCCAACAACTTCTTAACTGAAACTACTC CCGACTTGTATTACAACAGGAAAAACCACTCTGTCAAAGGCATAGACTGC ACTGGCGATTCACTCAAGAACGGAACAGTGCAGCTGGACAAAGATGCAAA CCATTGGGGTACTGCCACTGAGTGTGTAAATGGGCCAGCTTTACCGTCTC GAAGTGGAGTCGAAAGTCCCCCCACCATCATCCTCCGCAACAAGAATCCC CACGGTAGCACATACCTGGTAGTTGAGGAGGATACCAGCTACCCAAGCTT CCTCTACTCTGTCTGGCGAGCCAGTGGGGCCACAACATTACTTCCCGTCT TCTACATCTCCTCCAGTTACCGTCTGGTCGAAGCGATTGTGACAGGGATC GTGAATGGTGTGAAGACAGAGGGAAGAGATGAAATAACGGGCGGGGATTG TTTCGCATTGCTAACTTACTGGAGCTTGAACAACCTCGACTATCCCGAAG GAATCCGTATTTCGCCCTTTGGCGAACACCCTGACAATAACATTGGTGTT GTTCAGCACTTGAATGTCGTTGAGTCCATTGAGGCCGGTGTAGAAGTGAC TTCTCTTACAGCTGTCTTCGGGGTAGTCGTGCTTGCTTTATCGTTGGGTG CTATAGCTGGGTGGCTATGCTCAAGCAGTCCTGTGGATATTTATAACCCC TATGAGCTCATTAGCCACCTGAACTTGCCTACGGACAAAGATGGAAGCGT GGACAGTGACTTAGGAAAGCTACGCATTTTCGTAGAATACGTGAAAAATA ACCATATCAATGTTGAAGTGATAAAGGATATAGGGAGGCGGAATGGATGG GATCGCATATCTTTTGAGGCCGCTGAACTTGCGCTCTGCTGTTCAGGATT TAGTCAGGCCACGTCCACCAATAAGATGTGGTTGATGCCGTTGAAAGATC TCAGAGGAGCCAGTGACAATGAGCTAAGGGCATTCACCTGGAATGATGGG AGTGCTAGGAAACTACCAGGGGCACGAAGGAACGGTGCTTCAGATTTTTC TCGCCTAACTAAAGGACGTCTATTCTTTCCTGCACAAGTGACAACTGATC ATGAAGCAGAGGTGGGTAACACTAGCCACGCAACAGCGAGCATCAGCCCA TAGTCATAGACTGTTAAATGTGAGCAATGGCAAGCAAAAAGCTGATTTGC CAACATCATAGCACAGATTAGAGGTTGCCGCTTCTTGTTGTGTAGAAAGG TTGCATTTATCTTGATGGGGAGAGTTTTAGAGCAAGCTTTCAATGTGTAC ATGTTTCCAGGTATTTTGCTCTTTGTTGTTGTGGGCTATTGAAGTTTCCT TTGTATAGTTTATATATTTATTTTATGTTACCATACGGTTTCAATTTTTT TTGTAGAAGATGCCGTTCCAACCTGCGCTTTCTCCTCACCCCATCTATAC AGATAGTTCCTATGGGACTTAAGGCATACCCGACTTGTTTGTTTTATCCA ACTCAGTCACACTACCCAAAGGTGGAATAAAAATTTATGTGGAAGTTCAG GATGTTTTTTTTCCTACTGTGCTTTGTTGAGCCCATGTGAGGCACAGTTT GTTGTATTTGTGGATTTTCAGCTTGTTCTGTGTTCGATTATGGACAAAGC ATATGGATTGACTGGCCTATGCTTCGTGGCAGTAACCAATTAATTTAAGC TAGTAGTACATGTTACATTCTATTATGAATCTGAATAAATGGCAATAATT TTCAAGATACATCTACAGCAATAGAAAATACAGTACATACAGCTAGGCGC TGCTACGTTATGGCAGAACGTTATGGCAGAAATTCGTTCACCTTTCATAC CCACCTTTTCTGAAGGATGGGATTTTTGAG
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Coding sequence (CDS) from alignment at C-tenellus_contig8295:2803..5532-

>mRNA_C-tenellus_contig8295.3.1 ID=mRNA_C-tenellus_contig8295.3.1|Name=mRNA_C-tenellus_contig8295.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1860bp|location=Sequence derived from alignment at C-tenellus_contig8295:2803..5532- (Choristocarpus tenellus KU2346)
ATGCCAAATCTTTTGCTTCTCAATATTCGTGTAGCACACTCTTCCAACTC
ATGTTTTTCTATCGATGCCCCTTGTGCCGTGCTACTCATCCCACCTTCCG
ATCTGCTCTCACGAATGGATCGGTGTGATGGAATGTTTGTTTACGCTCTT
ACAGAATATTCGTCGTGCGCAGCTAAGCAGTCTAGAATGTGGACCATTAG
ACTCCGCAAAGGTGATGGTACATTATTCATCATCTTGTCTTTCATCTTCG
TTGCGTACATACTCCACCCGATTGTGGCAAAGGCTCTTGCACGTGTTAGG
GCTCATATGGGTTGGGTGGCGATCAAACATCGACGGCAGTCAGTGGAAGT
AACGCACTATCCTCTGGAAGCGGAAGTTATGGGAGACCGGGGAAACTGTA
ACTTTGCACGAATCGCAACTCTGCTGCTGGCCTTATTTTCTATTTCGTCC
TTGGGGTTGGAACTGACAATGGATCTCGCTTTTGAAACTGGTGGCCCAGT
AGACCTACTGAATCGTCCTCCCCCAGTGCTTGAGCGTGGTGAGAACAACG
ACGGAAAGATTTGGTTTATCACTCGTATGGATAACAGTACTGCTATAGAG
GGAAAGAGGGGCAATTTCAAGGACACATACAGCAGCGGTTACGCCGTGGG
ATTCTACAGAGTCGGTAGACATGGAAATGTGGGGATTGGTGATCGTGAAG
TTGAGGGAAATGCAGTCATCTCTCGGTGGTCCAACAACTTCTTAACTGAA
ACTACTCCCGACTTGTATTACAACAGGAAAAACCACTCTGTCAAAGGCAT
AGACTGCACTGGCGATTCACTCAAGAACGGAACAGTGCAGCTGGACAAAG
ATGCAAACCATTGGGGTACTGCCACTGAGTGTGTAAATGGGCCAGCTTTA
CCGTCTCGAAGTGGAGTCGAAAGTCCCCCCACCATCATCCTCCGCAACAA
GAATCCCCACGGTAGCACATACCTGGTAGTTGAGGAGGATACCAGCTACC
CAAGCTTCCTCTACTCTGTCTGGCGAGCCAGTGGGGCCACAACATTACTT
CCCGTCTTCTACATCTCCTCCAGTTACCGTCTGGTCGAAGCGATTGTGAC
AGGGATCGTGAATGGTGTGAAGACAGAGGGAAGAGATGAAATAACGGGCG
GGGATTGTTTCGCATTGCTAACTTACTGGAGCTTGAACAACCTCGACTAT
CCCGAAGGAATCCGTATTTCGCCCTTTGGCGAACACCCTGACAATAACAT
TGGTGTTGTTCAGCACTTGAATGTCGTTGAGTCCATTGAGGCCGGTGTAG
AAGTGACTTCTCTTACAGCTGTCTTCGGGGTAGTCGTGCTTGCTTTATCG
TTGGGTGCTATAGCTGGGTGGCTATGCTCAAGCAGTCCTGTGGATATTTA
TAACCCCTATGAGCTCATTAGCCACCTGAACTTGCCTACGGACAAAGATG
GAAGCGTGGACAGTGACTTAGGAAAGCTACGCATTTTCGTAGAATACGTG
AAAAATAACCATATCAATGTTGAAGTGATAAAGGATATAGGGAGGCGGAA
TGGATGGGATCGCATATCTTTTGAGGCCGCTGAACTTGCGCTCTGCTGTT
CAGGATTTAGTCAGGCCACGTCCACCAATAAGATGTGGTTGATGCCGTTG
AAAGATCTCAGAGGAGCCAGTGACAATGAGCTAAGGGCATTCACCTGGAA
TGATGGGAGTGCTAGGAAACTACCAGGGGCACGAAGGAACGGTGCTTCAG
ATTTTTCTCGCCTAACTAAAGGACGTCTATTCTTTCCTGCACAAGTGACA
ACTGATCATGAAGCAGAGGTGGGTAACACTAGCCACGCAACAGCGAGCAT
CAGCCCATAG
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