mRNA_C-tenellus_contig8277.2.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig8277.2.2
Unique NamemRNA_C-tenellus_contig8277.2.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig8277.2.2 vs. uniprot
Match: D8LJN1_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN1_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 4.690e-71
Identity = 187/446 (41.93%), Postives = 238/446 (53.36%), Query Frame = 1
Query:   19 LVVQLMSKIVNLRRKPPLTLMLMAAMTIIHLKPELFRELLEGSGEFLGGNGLRDVLRGAMGRGTGIVQSICLKPNVIVDTFFRQGRVDLRRLLLSAFLHGDDLHLYYNMASLLLKGVTLELSLGSMAFARTIIFTLLVSHGLVVAIAWTLFNFLDVPGPYQSCSIGFSAVLFALKYIISCRSPPGTSVRVMGLTVSARHAAWLELALISALVPNASFLGHLCGILAGILHEHA------LPLFLGDPTPVPPRFRGRTSGRGGWWPWSSRPSYTYRSGTSGASPPNEGTSQGNGTGLGQGGVDNRGTGMGRHTTRVWVEGGASAGNSDDPD-----LQEAIRRSLQPGQTRGSG------ESNGVDRRYSPPSPSTPLPSEAVRAT------PSAPPVWEVAGDSGTGTXXXXXXXXXSETLQMPVGSNAASELRRRRLLRFDAKR 1287
            L ++L+ +I  L+ KPPLTL LMA M+ +HLKP++F++L    G F         L G        ++++CL P  I+DT+ R G V++RRLL+S F+HGDD+HLYYNMAS LLKGV+LEL++G+ AFA  + F+LL S  L++  AW L    DVP P  +C++GFS VLFALKY++S RSP  TSV  MG +V  R+A WLEL LIS +VPNASFLGHLCGILAG+L+         + LF G    +    RGR              SYTY SGTSG + P                      G  R T +      A+     DP+     LQEA+RRSL    TRG G        NG     +P S S P+  +AV AT      P+APP  E AG  G G                  G  A  ELRRRRL R  A R
Sbjct:   39 LALRLVHQISQLQHKPPLTLALMAGMSALHLKPDIFKDLFGRKGVFEW-----SWLTGGFDH----IRNVCLLPASILDTYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACAVGFSGVLFALKYVLSRRSPGVTSV--MGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVVNLFTGIS--LYNNRRGR--------------SYTYNSGTSGRASPE---------------------GARRETRQQSPNPPAAYDIDSDPEAEEAALQEALRRSLLDS-TRGGGAGDNLRRDNGNSAADNPGSRSRPIGDDAVAATEFLGPAPTAPPPEENAGGYGAGG-----------------GEIAPDELRRRRLRRLGAGR 418          
BLAST of mRNA_C-tenellus_contig8277.2.2 vs. uniprot
Match: A0A2R6WSK1_MARPO (RanBP2-type domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WSK1_MARPO)

HSP 1 Score: 164 bits (414), Expect = 1.540e-41
Identity = 107/246 (43.50%), Postives = 142/246 (57.72%), Query Frame = 1
Query:   16 MLVVQLMSKIVNLRRKPPLTLMLMAAMTIIHLKPELFRELLEGSGEFLGGNGLRDVLRGAMGRGTGIVQSICLKPNVIVDTFFRQGRVDLRRLLLSAFLHGDDLHLYYNMASLLLKGVTLELSLGSMAFARTIIFTLLVSHGLVVAIAWTLFNFLDVPGP-YQSCSIGFSAVLFALKYIISCRSPPGTSVRVMGLTVSARHAAWLELALISALVPNASFLGHLCGILAGILHEHALPLFLGDPTPV 750
            ML +   S+ + L RKPP+T  L+ A TI+HL+P                 G+ D++          VQ +CL P  ++  +      D RRLLLSAF H DD HL YNM SLL KGV LE S+GS  FA  +   L +SHGLVV  A  L++F D PGP Y  C++GFSAVLFALK +++  SP  T+V   G+ + +R+AAW EL  I   VP  SFLGHLCG++AG+++ +   L  G   PV
Sbjct:   18 MLALHAASQFMQLPRKPPVTATLILANTIVHLRP-----------------GVLDLVLPT-------VQEVCLNPYRVLKDW------DARRLLLSAFYHVDDAHLVYNMISLLWKGVQLEGSMGSKKFAGMVGVLLGLSHGLVVVSAKFLYSFADNPGPMYSECAVGFSAVLFALKMVLNWNSPDYTNV--YGVLIPSRYAAWAELFFIQMFVPGTSFLGHLCGVVAGLIYINGSFLLSGTRAPV 231          
BLAST of mRNA_C-tenellus_contig8277.2.2 vs. uniprot
Match: A0A836CHG7_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG7_9STRA)

HSP 1 Score: 159 bits (402), Expect = 7.200e-40
Identity = 113/272 (41.54%), Postives = 145/272 (53.31%), Query Frame = 1
Query:   31 LMSKIVNLRRKPPLTLMLMAAMTIIHLKPELFRELLEGSGEFLGGNGLRDVLRGAMGRGTGIVQSICLKPNVIVDTFFRQGRVDLRRLLLSAFLHGDDLHLYYNMASLLLKGVTLELSLGSMAFARTIIFTLLVSHGLVVAIAWTLFNFLDVPGPYQSCSIGFSAVLFALKYIISCRSPPGTSVRVMGLTVSARHAAWLELALISALVPNASFLGHLCGILAGILHEHALPLFLGDPTPVPPRFRGRTSGRGGWWPWSSRPS-YTYRSGTSG 843
            L+++ + L  KPP T  L+A    IHL P     +L     F                  G    +CLKP  +V      G VD  RL  SA +HGDDLHL+YNM SLL+KGV+LE ++G+ AFA  ++F   +SH LVV +A         PG + SC +GFSAVLFALKY+ + R P      V    + +R A+W EL LI  +VPNASFLGHLCGILAG+L  H   +       + P   GR  G G +  +  R S YTY  GTSG
Sbjct:   22 LLNRFLQLPYKPPFTCFLIALNACIHLYPAALAGVLPARLLF------------------GDYTKVCLKPAKVVKELLN-GEVDAVRLFGSALIHGDDLHLWYNMGSLLMKGVSLETTMGTPAFALLVVFLWALSHTLVVVVALASVYLGFDPG-FNSCMVGFSAVLFALKYVAAFREP-ARPTPVGYFLIDSRWASWAELILIQVVVPNASFLGHLCGILAGVLWVHGGAVVAYTAKTLAPLGVGR-GGPGAYDTYGGRGSRYTYARGTSG 271          
BLAST of mRNA_C-tenellus_contig8277.2.2 vs. uniprot
Match: A0A0D6R7I5_ARACU (RanBP2-type domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R7I5_ARACU)

HSP 1 Score: 151 bits (382), Expect = 4.820e-37
Identity = 96/232 (41.38%), Postives = 133/232 (57.33%), Query Frame = 1
Query:   16 MLVVQLMSKIVNLRRKPPLTLMLMAAMTIIHLKPELFRELLEGSGEFLGGNGLRDVLRGAMGRGTGIVQSICLKPNVIVDTFFRQGRVDLRRLLLSAFLHGDDLHLYYNMASLLLKGVTLELSLGSMAFARTIIFTLLVSHGLVVAIAWTLFNFLDVPGPYQS-CSIGFSAVLFALKYIISCRSPPGTSVRVMGLTVSARHAAWLELALISALVPNASFLGHLCGILAGILH 708
            +L + + S+   L RKPP+T  L+AA  +I+L+P +  ++L    E                        +CL P ++          D++RL +SAF H D+ HL YNM SLL KGV LE  +GS  FA  +   L +SHG+VV +A  L  + D PGP+ S C++GFS+VLFALK +++  SP  T+V   G+ V ARHAAW EL LI   VP  SFLGHL GI+AG+L+
Sbjct:   16 LLAMHVASEFYQLERKPPVTAGLIAANALIYLRPGVLDDVLPTLSE------------------------VCLNPYLVFKN------KDVKRLFVSAFYHVDESHLVYNMLSLLWKGVQLETMMGSTEFASMVAVLLGLSHGIVVILAKVLATYFDYPGPWTSECAVGFSSVLFALKVVLNSNSPNYTNV--YGVIVPARHAAWAELLLIQMFVPGVSFLGHLSGIIAGLLY 215          
BLAST of mRNA_C-tenellus_contig8277.2.2 vs. uniprot
Match: A0A0A7E6Y5_GINBI (Rhomboid protein Ginbi_RBL14 n=1 Tax=Ginkgo biloba TaxID=3311 RepID=A0A0A7E6Y5_GINBI)

HSP 1 Score: 151 bits (382), Expect = 5.050e-37
Identity = 107/267 (40.07%), Postives = 143/267 (53.56%), Query Frame = 1
Query:    1 KAYFAMLVVQLMSKIVNLRRKPPLTLMLMAAMTIIHLKPELFRELLEGSGEFLGGNGLRDVLRGAMGRGTGIVQSICLKPNVIVDTFFRQGRVDLRRLLLSAFLHGDDLHLYYNMASLLLKGVTLELSLGSMAFARTIIFTLLVSHGLVVAIAWTLFNFLDVPGPYQS-CSIGFSAVLFALKYIISCRSPPGTSVRVMGLTVSARHAAWLELALISALVPNASFLGHLCGILAGILHEHALPLFLGDPTPVPPRFRGRTSGRGGWWP 798
            +   ++L +Q+ S+   L RKPP+T  L+AA T+I+L+P +  ++L    E                        +CL P +++         D++RL LSAF H D+ HL YNM SLL KGV LE  +GS  FA  +   L +SHG+VV +A  L  F D P    S C++GFSAVLFALK +++  SP      V G+ V ARHAAW EL LI   VP  SFLGHL GI AG+L+      F G   P+ P  R  T+  G  WP
Sbjct:   11 RGMLSLLALQVASQFYQLERKPPVTAGLIAANTLIYLRPGVLDDVLPPLSE------------------------VCLNPYLVLKDR------DVKRLFLSAFYHVDESHLVYNMLSLLWKGVQLERMMGSTEFASMVALLLGLSHGIVVVLAKLLATFFDYPYALISECAVGFSAVLFALKVVLNSNSP--NYANVYGVLVPARHAAWAELLLIQMFVPGVSFLGHLSGIFAGLLYLRLQRFFPGS-NPLYPIIRKVTAIMG--WP 242          
BLAST of mRNA_C-tenellus_contig8277.2.2 vs. uniprot
Match: F0W223_9STRA (Serine protease family S54 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W223_9STRA)

HSP 1 Score: 149 bits (377), Expect = 6.500e-37
Identity = 96/223 (43.05%), Postives = 131/223 (58.74%), Query Frame = 1
Query:   31 LMSKIVNLRRKPPLTLMLMAAMTIIHLKPELFRELLEGSGEFLGGNGLRDVLRGAMGRGTGIVQSICLKPNVIVDTFFRQGRVDLRRLLLSAFLHGDDLHLYYNMASLLLKGVTLELSLGSMAFARTIIFTLLVSHGLVVAIAWTLFNFLDVPGPYQSCSIGFSAVLFALKYIISCRSPPGTSVRVMGLTVSARHAAWLELALISALVPNASFLGHLCGILAG 699
            L+ KI+ + RKPPLT+ L+  M+ +H +                   + D+  GA    T   +S  L PN+IV       R +  RL+ SAF HGDD+HLY+NM S L KG  LE  +GS  FA  +I+ LLVSHGL+V  ++ +F     P  +  CS+GFSAVLF LK +++ +SP   +  + G  V  ++AAWLEL LI  LVP+ASFLGHLCGI+AG
Sbjct:   23 LIQKIMQMDRKPPLTISLIVLMSNLHFR-------------------IFDI--GA----TLSPESYMLCPNLIVR------RHEWERLIGSAFFHGDDIHLYHNMVSFLWKGYQLESKMGSYHFACLLIYLLLVSHGLIVLASYLIFKLQHNPHAWTQCSLGFSAVLFGLKVVLNSKSP--NTSNIYGFQVPTKYAAWLELVLIHVLVPDASFLGHLCGIVAG 212          
BLAST of mRNA_C-tenellus_contig8277.2.2 vs. uniprot
Match: A0A482UPC4_9ARCH (Rhomboid family intramembrane serine protease (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UPC4_9ARCH)

HSP 1 Score: 145 bits (366), Expect = 4.580e-36
Identity = 92/234 (39.32%), Postives = 137/234 (58.55%), Query Frame = 1
Query:   19 LVVQLMSKIVNLRRKPPLTLMLMAAMTIIHLKPELFRELLEGSGEFLGGNGLRDVLRGAMGRGTGIVQSICLKPNVIVDTFFRQGRVDLRRLLLSAFLHGDDLHLYYNMASLLLKGVTLELSLGSMAFARTIIFTLLVSHGLVVAIAWTLFNFLDVP--GPYQSCSIGFSAVLFALKYIISCRSPPGTSVRVMGLTVSARHAAWLELALISALVPNASFLGHLCGILAGILHEH 714
            L++Q++S++  L  KPP+TL L+A   I H+ P+ +   L+ S        L +V +             C+ P++IV +      +   R++L+ F+H DD+HLYYNM SLL KGV LE   GS  F   ++++LL SH L+V +++ ++          Y SC+IGFSAVLF+LKY+++  SP  TS+  +G  V ++ AAW EL L S L P  SF+GHL GILAG L+ H
Sbjct:   21 LLIQILSQLEKLPYKPPVTLGLLAMNIIAHIHPDPY--FLDYS--------LTNVRQN------------CIWPSLIVSSLTNNHSILWNRIVLAGFMHADDMHLYYNMLSLLWKGVQLEQQFGSFQFGILVVYSLLASHILLVVMSYVVYAVTQNIHISSYDSCAIGFSAVLFSLKYVLNQNSPAYTSI--LGFQVPSKWAAWAELVLASLLSPQVSFIGHLAGILAGYLYVH 230          
BLAST of mRNA_C-tenellus_contig8277.2.2 vs. uniprot
Match: A0A024G5H6_9STRA (Rhomboid domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G5H6_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.660e-35
Identity = 82/167 (49.10%), Postives = 106/167 (63.47%), Query Frame = 1
Query:  220 QSICLKPNVIVDTFFRQGRVDLRRLLLSAFLHGDDLHLYYNMASLLLKGVTLELSLGSMAFARTIIFTLLVSHGLVVAIAWTLFNFLDVPGPYQSCSIGFSAVLFALKYIISCRSPPGTSVRVMGLTVSARHAAWLELALISALVPNASFLGHLCGILAG---ILHE 711
            +S  L PN+I        R +  RL+ +AF HGDD+HLY+NM S L KG  LE  +GS  FA  + + LLVSHGL+V  ++ +  +   P  +  CS+GFSAVLF LK +++  SP  TS+   G  V  ++AAWLEL LI  LVPNASFLGHLCGI+AG   ILH 
Sbjct:   32 ESYMLCPNLIAR------RREWERLIGAAFFHGDDIHLYHNMVSFLWKGYQLESKMGSYRFACVLAYLLLVSHGLIVLTSYLILKYQHNPHAWTQCSLGFSAVLFGLKVVLNSESPNTTSI--YGFHVPTKYAAWLELVLIHVLVPNASFLGHLCGIVAGYSWILHS 190          
BLAST of mRNA_C-tenellus_contig8277.2.2 vs. uniprot
Match: A0A024TVC7_9STRA (Rhomboid domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVC7_9STRA)

HSP 1 Score: 143 bits (361), Expect = 6.840e-35
Identity = 108/280 (38.57%), Postives = 150/280 (53.57%), Query Frame = 1
Query:   16 MLVVQLMSKIVNLRRKPPLTLMLMAAMTIIHLKPELFRELLEGSGEFLGGNGLRDVLRGAMGRGTGIVQSICLKPNVIVDTFFRQGRVDLRRLLLSAFLHGDDLHLYYNMASLLLKGVTLELSLGSMAFARTIIFTLLVSHGLVVAIAWTLFNFLDVPGPYQSCSIGFSAVLFALKYIISCRSPPGTSVRVMGLTVSARHAAWLELALISALVPNASFLGHLCGILAGILHEHALPLFLGDPTPVPPRFRGRTSGRGGWWPWSSRPSYTYRSGTSGASPP 855
            ML +QL+ +I  L RKPP+TL+LM  M                 G FL         +G  G  T    ++C  P++IV+ +       L RL++SAFLH D+ HLY NMAS L KGV LE  +GS  FAR I   L++SH L V +A+ L  F+        C+IGFSAVLFALK +++ RSP  T   ++G++   ++AAW+EL  +   VP +SF+GH+ GI AG L+ + L       T +P          GG    + RP+YTY SG +  S P
Sbjct:   27 MLAMQLLGQIQQLERKPPVTLLLMGGMV----------------GLFL--------YQGHPGIPTARKYALC--PDIIVEKYA------LSRLIVSAFLHVDEWHLYNNMASFLWKGVQLEFHVGSERFARMIGVLLVMSHVLAVVVAYILSTFMGNSSYIHQCAIGFSAVLFALKVVLNQRSP--TYSTILGISFPTKYAAWVELVYLHYFVPGSSFVGHIAGIAAGYLYLYGLSAVPTRATTIP----------GG----TRRPAYTYASGRATNSTP 258          
BLAST of mRNA_C-tenellus_contig8277.2.2 vs. uniprot
Match: L8GZE0_ACACA (Peptidase, S54 (Rhomboid) subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZE0_ACACA)

HSP 1 Score: 142 bits (358), Expect = 2.570e-34
Identity = 87/182 (47.80%), Postives = 109/182 (59.89%), Query Frame = 1
Query:  274 RVDLRRLLLSAFLHGDDLHLYYNMASLLLKGVTLELSLGSMAFARTIIFTLLVSHGLVVAIAWTLFNFLDVPGPYQSCSIGFSAVLFALKYIISCRSPPGTSVRVMGLTVSARHAAWLELALISALVPNASFLGHLCGILAGILH------------EHALPLFLGDPTPVPPRFRGRTSGR 783
            R+DLRRLLL++F H DD+HLYYNM SLL KG  LE  +GS  FA  ++   LVS+ L+V  +  L  F D+PGPY SC++GFSAVLFALK + +  S    S   MG+ V  ++  W EL LI  LVP +SF GHLCGIL GIL+            +  L  FLG    +PP   G   GR
Sbjct:   62 RLDLRRLLLASFFHLDDMHLYYNMVSLLWKGRDLEPRMGSKRFATLVVLFALVSNMLMVVGSVLLDRFADMPGPYNSCAVGFSAVLFALKVVTTHYSTSPYS-HFMGMLVPTQYLYWFELVLIHLLVPGSSFFGHLCGILTGILYVKGVFRPILELVDFVLSFFLGG---LPPSASGGGGGR 239          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8277.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN1_ECTSI4.690e-7141.93Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
A0A2R6WSK1_MARPO1.540e-4143.50RanBP2-type domain-containing protein n=2 Tax=Marc... [more]
A0A836CHG7_9STRA7.200e-4041.54Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
A0A0D6R7I5_ARACU4.820e-3741.38RanBP2-type domain-containing protein n=1 Tax=Arau... [more]
A0A0A7E6Y5_GINBI5.050e-3740.07Rhomboid protein Ginbi_RBL14 n=1 Tax=Ginkgo biloba... [more]
F0W223_9STRA6.500e-3743.05Serine protease family S54 putative n=1 Tax=Albugo... [more]
A0A482UPC4_9ARCH4.580e-3639.32Rhomboid family intramembrane serine protease (Fra... [more]
A0A024G5H6_9STRA3.660e-3549.10Rhomboid domain-containing protein n=1 Tax=Albugo ... [more]
A0A024TVC7_9STRA6.840e-3538.57Rhomboid domain-containing protein n=1 Tax=Aphanom... [more]
L8GZE0_ACACA2.570e-3447.80Peptidase, S54 (Rhomboid) subfamily protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8277contigC-tenellus_contig8277:3609..5855 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJN1
Preferred nameRHBDD1
PFAMsRhomboid
Model size1959
Max annot lvl2759|Eukaryota
KEGG koko:K09651
Hectar predicted targeting categorymitochondrion
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006508,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006986,GO:0007276,GO:0007283,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010604,GO:0010628,GO:0010941,GO:0010954,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019222,GO:0019538,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030162,GO:0030163,GO:0030176,GO:0030970,GO:0031224,GO:0031227,GO:0031293,GO:0031323,GO:0031325,GO:0031984,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032527,GO:0032879,GO:0033036,GO:0033554,GO:0033619,GO:0034613,GO:0034620,GO:0034644,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036503,GO:0042175,GO:0042176,GO:0042221,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044322,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045184,GO:0045732,GO:0045862,GO:0046907,GO:0048232,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0060255,GO:0060548,GO:0065007,GO:0070011,GO:0070613,GO:0070727,GO:0070887,GO:0071214,GO:0071310,GO:0071478,GO:0071482,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0098827,GO:0104004,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903317,GO:1903319,GO:1903513,GO:1904211
Exons2
Evalue2.18e-74
EggNOG OGsKOG2632@1|root,KOG2632@2759|Eukaryota
Ec32 ortholog descriptionPeptidase S54, rhomboid domain
Ec32 orthologEc-17_002690.1
Descriptionserine-type endopeptidase activity
Cds size1275
COG categoryP
BRITEko00000,ko01000,ko01002
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790093.222567-UTR-C-tenellus_contig8277:3608..36231680790093.222567-UTR-C-tenellus_contig8277:3608..3623Choristocarpus tenellus KU2346UTRC-tenellus_contig8277 3609..3623 +
1680790093.2631109-UTR-C-tenellus_contig8277:5186..58551680790093.2631109-UTR-C-tenellus_contig8277:5186..5855Choristocarpus tenellus KU2346UTRC-tenellus_contig8277 5187..5855 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790093.2343984-CDS-C-tenellus_contig8277:3623..38741680790093.2343984-CDS-C-tenellus_contig8277:3623..3874Choristocarpus tenellus KU2346CDSC-tenellus_contig8277 3624..3874 +
1680790093.25283-CDS-C-tenellus_contig8277:4162..51861680790093.25283-CDS-C-tenellus_contig8277:4162..5186Choristocarpus tenellus KU2346CDSC-tenellus_contig8277 4163..5186 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8277.2.2prot_C-tenellus_contig8277.2.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig8277 3624..5186 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig8277.2.2

>prot_C-tenellus_contig8277.2.2 ID=prot_C-tenellus_contig8277.2.2|Name=mRNA_C-tenellus_contig8277.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=425bp
MLVVQLMSKIVNLRRKPPLTLMLMAAMTIIHLKPELFRELLEGSGEFLGG
NGLRDVLRGAMGRGTGIVQSICLKPNVIVDTFFRQGRVDLRRLLLSAFLH
GDDLHLYYNMASLLLKGVTLELSLGSMAFARTIIFTLLVSHGLVVAIAWT
LFNFLDVPGPYQSCSIGFSAVLFALKYIISCRSPPGTSVRVMGLTVSARH
AAWLELALISALVPNASFLGHLCGILAGILHEHALPLFLGDPTPVPPRFR
GRTSGRGGWWPWSSRPSYTYRSGTSGASPPNEGTSQGNGTGLGQGGVDNR
GTGMGRHTTRVWVEGGASAGNSDDPDLQEAIRRSLQPGQTRGSGESNGVD
RRYSPPSPSTPLPSEAVRATPSAPPVWEVAGDSGTGTGEAASGEGESETL
QMPVGSNAASELRRRRLLRFDAKR*
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mRNA from alignment at C-tenellus_contig8277:3609..5855+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig8277.2.2 ID=mRNA_C-tenellus_contig8277.2.2|Name=mRNA_C-tenellus_contig8277.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2247bp|location=Sequence derived from alignment at C-tenellus_contig8277:3609..5855+ (Choristocarpus tenellus KU2346)
AAGGCCTATTTTGCGATGTTAGTGGTCCAACTTATGAGTAAGATAGTAAA TTTAAGGAGGAAACCTCCGTTAACTCTGATGCTGATGGCTGCTATGACGA TTATTCACCTAAAACCTGAATTGTTCCGGGAGTTACTGGAAGGGAGTGGG GAGTTTCTGGGTGGGAATGGACTTCGGGATGTCCTGCGGGGTGCGATGGG GAGAGGGACGGGCATCGTCCAGAGCATCTGTCTCAAACCCAACGTCATCG TTGATACATTTTTTCGGTGAGTGATTCACTGCCCTATACTAGGATGCTTC GGCCTGATGCATGATGCTATTCATTCGGAGAACGGACACGAAGAGTCCAG CCTTGTCTTTGCTCTCACTTGAAACAGATTATCTTTTGTGTCAATCAGTG TGAAGAGTTATCCCTATCCACTTTAACAGTATCATATAGAATCCTGATGC CTTATGCTTCGCCCCTCTTTCCATCTTAAACAAGTCCGCTTTCTCTCGTT CTCTCCTTTCGTTACCACACCTGGACACGTGGACACTCTCTTGTGAACCC TCAGTCAAGGCAGGGTTGATCTAAGAAGGTTGCTGCTCTCGGCGTTCTTG CACGGTGATGACTTGCATCTCTATTATAACATGGCTAGCCTTCTCCTTAA GGGTGTAACTCTGGAGCTCAGCCTTGGGTCAATGGCCTTTGCTCGGACAA TCATCTTTACCCTCCTTGTTTCGCATGGCCTAGTTGTGGCCATCGCCTGG ACCCTCTTCAACTTCCTCGATGTCCCGGGGCCGTACCAATCCTGTTCAAT CGGATTTTCTGCGGTTCTTTTTGCCCTCAAGTACATCATCAGCTGCCGTT CTCCCCCTGGGACCTCTGTGAGGGTGATGGGGTTAACGGTTAGTGCTCGT CATGCTGCATGGCTGGAGCTTGCCCTCATCTCCGCCCTTGTACCCAATGC ATCCTTCCTCGGTCATTTATGTGGTATACTGGCTGGTATTCTCCATGAGC ATGCATTGCCACTTTTCCTTGGTGATCCCACCCCTGTGCCTCCAAGGTTC AGAGGAAGGACCTCGGGACGAGGTGGTTGGTGGCCATGGTCATCTCGGCC ATCCTACACCTACAGGAGTGGTACGAGTGGTGCTTCACCCCCAAATGAAG GAACAAGTCAAGGGAATGGCACGGGGTTGGGGCAGGGTGGGGTCGATAAC AGAGGCACGGGCATGGGAAGACACACCACCCGGGTGTGGGTGGAGGGAGG GGCATCTGCTGGTAATAGTGATGATCCTGATTTGCAAGAGGCAATTCGAC GATCGCTTCAGCCAGGTCAAACTAGGGGATCGGGTGAAAGCAATGGTGTT GATAGGCGATACTCACCACCATCACCCTCAACCCCACTTCCATCAGAGGC TGTTAGGGCAACGCCCTCTGCTCCACCTGTGTGGGAAGTAGCCGGAGATA GTGGAACAGGTACGGGTGAGGCAGCTTCTGGAGAGGGGGAAAGTGAAACC CTGCAAATGCCTGTGGGTTCAAATGCAGCCAGCGAACTTAGAAGGCGGAG GTTGCTTCGGTTTGATGCAAAGAGATGACACAGGAGCAAGGCACTTCAGC CGTTGGCTTTCAATAGGACATGGGTACATCTGTGGTTGATTTTACTGCAG ACAGCTGGTTTGACATATATACTCCAGAGTACATGTGTGGCGGATATGGA GTTTTGTCTAGAGAAGCTAGGGGGCGGATATGGTTGGCAACACAACTGCA AGAGGAGAAACAAGGGGCTTTTGTTTTGTCTGGTCTCCTCCAAGATCCGT TGGAAACTTCACTGCTGCTGTGGTGGTTGCCTGCAACCTGTGCACTTTTT CTGGATGTGAATGCCTTCATTACCTTTCCTCTTGATTACAACATTCAAGT GGAGTGTGAATATATGGAGATTATTTAAAACCTTTATGTGATCAACCTGA GAAGTTCAGGAAAGGAAAAAGTGGAGCAAACTATCGACCCCATTGAGACA ACCCACCAGATGAAAATGGGCCTTCCCTATTCTACAACCGCCCCATCTAC TCTGTCCACCAAGTCTCTAGAATATATGCTTGGGGTATCCTACTGCTTCA AACACATTGGAATGTGTATATACTTCTACTTTGCATGCATTTTGAACTGT GTATATATATAACTTTTATATTAATGCTATGCGTGCATTTTCTTTCAAGA GCGCACATGTGTCTTGTGGTAAGCCATGACATTTTAGTCGAGATTGG
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Coding sequence (CDS) from alignment at C-tenellus_contig8277:3609..5855+

>mRNA_C-tenellus_contig8277.2.2 ID=mRNA_C-tenellus_contig8277.2.2|Name=mRNA_C-tenellus_contig8277.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1275bp|location=Sequence derived from alignment at C-tenellus_contig8277:3609..5855+ (Choristocarpus tenellus KU2346)
ATGTTAGTGGTCCAACTTATGAGTAAGATAGTAAATTTAAGGAGGAAACC
TCCGTTAACTCTGATGCTGATGGCTGCTATGACGATTATTCACCTAAAAC
CTGAATTGTTCCGGGAGTTACTGGAAGGGAGTGGGGAGTTTCTGGGTGGG
AATGGACTTCGGGATGTCCTGCGGGGTGCGATGGGGAGAGGGACGGGCAT
CGTCCAGAGCATCTGTCTCAAACCCAACGTCATCGTTGATACATTTTTTC
GTCAAGGCAGGGTTGATCTAAGAAGGTTGCTGCTCTCGGCGTTCTTGCAC
GGTGATGACTTGCATCTCTATTATAACATGGCTAGCCTTCTCCTTAAGGG
TGTAACTCTGGAGCTCAGCCTTGGGTCAATGGCCTTTGCTCGGACAATCA
TCTTTACCCTCCTTGTTTCGCATGGCCTAGTTGTGGCCATCGCCTGGACC
CTCTTCAACTTCCTCGATGTCCCGGGGCCGTACCAATCCTGTTCAATCGG
ATTTTCTGCGGTTCTTTTTGCCCTCAAGTACATCATCAGCTGCCGTTCTC
CCCCTGGGACCTCTGTGAGGGTGATGGGGTTAACGGTTAGTGCTCGTCAT
GCTGCATGGCTGGAGCTTGCCCTCATCTCCGCCCTTGTACCCAATGCATC
CTTCCTCGGTCATTTATGTGGTATACTGGCTGGTATTCTCCATGAGCATG
CATTGCCACTTTTCCTTGGTGATCCCACCCCTGTGCCTCCAAGGTTCAGA
GGAAGGACCTCGGGACGAGGTGGTTGGTGGCCATGGTCATCTCGGCCATC
CTACACCTACAGGAGTGGTACGAGTGGTGCTTCACCCCCAAATGAAGGAA
CAAGTCAAGGGAATGGCACGGGGTTGGGGCAGGGTGGGGTCGATAACAGA
GGCACGGGCATGGGAAGACACACCACCCGGGTGTGGGTGGAGGGAGGGGC
ATCTGCTGGTAATAGTGATGATCCTGATTTGCAAGAGGCAATTCGACGAT
CGCTTCAGCCAGGTCAAACTAGGGGATCGGGTGAAAGCAATGGTGTTGAT
AGGCGATACTCACCACCATCACCCTCAACCCCACTTCCATCAGAGGCTGT
TAGGGCAACGCCCTCTGCTCCACCTGTGTGGGAAGTAGCCGGAGATAGTG
GAACAGGTACGGGTGAGGCAGCTTCTGGAGAGGGGGAAAGTGAAACCCTG
CAAATGCCTGTGGGTTCAAATGCAGCCAGCGAACTTAGAAGGCGGAGGTT
GCTTCGGTTTGATGCAAAGAGATGA
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