mRNA_C-tenellus_contig8277.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8277.1.1 vs. uniprot
Match: D8LG74_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG74_ECTSI) HSP 1 Score: 226 bits (576), Expect = 2.400e-67 Identity = 124/219 (56.62%), Postives = 147/219 (67.12%), Query Frame = 1 Query: 109 NALLESPTGTGKTLCLLCSTLAWQFKASLAVKKGGQKGSLAYEDPG----------QAPPLPQTQSMPVGVPT-IIYSSRTHSQLAQVVKELKNTTYRPRLSLLGSREQLCVHDDVRRLKGQAMNHACGALVSGRQCKYHRGTE-----AGPVVNT---------NQNQVVDIEELVSLAKTHQFCPYYHSRGEAPQAELVLMPYNYLLDPNSRRGVKV 690 NALLESPTGTGKTLCLL ++LAWQ + S V LAY++ Q P ++ +P+ IIY+SRTHSQL QV ELKNT YRPRLSLLGSR+QLCVH++V ++KG A NHAC ALV R+CKYHRGTE AG +Q+ V DIEELVSLAK H+FCPYY RG AP+AELVLMPYNYLLDP +RRG+K+ Sbjct: 3 NALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAPTQLAYDERPVTDLSRPRHEQQPYQENKPALAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXPPDQSTVPDIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGTRRGIKI 221
BLAST of mRNA_C-tenellus_contig8277.1.1 vs. uniprot
Match: A0A482SMY5_9ARCH (Helicase ATP-binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMY5_9ARCH) HSP 1 Score: 217 bits (553), Expect = 1.990e-65 Identity = 106/239 (44.35%), Postives = 159/239 (66.53%), Query Frame = 1 Query: 1 MPTFDINGTDVDFPFQPYDCQFTYMRSVMEALNTPTNALLESPTGTGKTLCLLCSTLAWQFKASLAVKKGGQKGSLAYE-------DPGQAPPLPQTQSMPVGVPTIIYSSRTHSQLAQVVKELKNTTYRPRLSLLGSREQLCVHDDVRRLKGQAMNHACGALVSGRQCKYHRGTEA--GPVVNTNQNQVVDIEELVSLAKTHQFCPYYHSRGEAPQAELVLMPYNYLLDPNSRRGVKV 690 MP I+G +V+FP PY+CQ TYM+ V++A++T +NALLESPTGTGKTL LLC++LAWQ + + ++ K + + AP + Q IIY++RTHSQL QV++EL++T YRP++++LGSREQLC+HD V +LKG A+NHAC L + R C+Y ++ G V++ +Q +VVDIE+L + + CPY++SR + A+++ MPYNYLLD + R+ ++ Sbjct: 1 MPVVPISGVNVEFPKTPYECQVTYMQKVLQAMSTGSNALLESPTGTGKTLSLLCASLAWQKQHNRRLEPANDKINQFDQFNVSKDNSTANAPTINQNV-------VIIYATRTHSQLNQVIRELQSTAYRPKMAVLGSREQLCIHDKVSKLKGSAINHACTTLTTQRGCRYRNNLDSDNGSVIHVSQEEVVDIEDLALIGRRKAICPYFYSRDMSANADIIFMPYNYLLDASIRKTTRI 232
BLAST of mRNA_C-tenellus_contig8277.1.1 vs. uniprot
Match: A0A836CNR1_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNR1_9STRA) HSP 1 Score: 224 bits (570), Expect = 5.110e-65 Identity = 119/237 (50.21%), Postives = 149/237 (62.87%), Query Frame = 1 Query: 1 MPTFDINGTDVDFPFQPYDCQFTYMRSVMEALNTPTNALLESPTGTGKTLCLLCSTLAWQFKASLAVKKGGQKGSLAYEDPGQAPPLPQTQSMPVGVP-------TIIYSSRTHSQLAQVVKELKNTTYRPRLSLLGSREQLCVHDDVRRLKGQAMNHACGALVSGRQCKYHRGTEAGPVVNTNQNQVVDIEELVSLAKTHQFCPYYHSRGEAPQAELVLMPYNYLLDPNSRRGVKV 690 M +I G V FPF+PYDCQ YM +V+ AL+ TNALLESPTGTGKTLCLLCS LAWQ + +G + + G TIIY+SRTHSQL+QV +ELK+T YRPRL+LLGSREQLCVH ++ +L+G +N AC AL S R C +HR +AG + V+DIEEL + + FCPYY SRG A A+LVLMPYNYLLD +RR +++ Sbjct: 1 MAALNIEGVPVQFPFKPYDCQRDYMTAVIRALSDKTNALLESPTGTGKTLCLLCSALAWQAHNKAQQARQLSRGGGSMQQLGXXXXXXXXXXXXXXXXXXXXXRCTIIYASRTHSQLSQVARELKSTAYRPRLALLGSREQLCVHKEIAQLRGGQLNAACQALASRRACAHHRALDAG--AGPPADAVLDIEELAARGRAEGFCPYYLSRGAAADADLVLMPYNYLLDAAARRALRL 235
BLAST of mRNA_C-tenellus_contig8277.1.1 vs. uniprot
Match: UPI000E6F4BBA (regulator of telomere elongation helicase 1 homolog n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6F4BBA) HSP 1 Score: 221 bits (563), Expect = 3.620e-64 Identity = 114/239 (47.70%), Postives = 160/239 (66.95%), Query Frame = 1 Query: 1 MPTFDINGTDVDFPFQPYDCQFTYMRSVMEALNTPTNALLESPTGTGKTLCLLCSTLAWQ-----FKASLAVKKGGQKGSLAYEDPGQAPPLPQTQSMPVGVPTIIYSSRTHSQLAQVVKELKNTTYRPRLSLLGSREQLCVHDDVRRLKGQAMNHACGALVSGRQCKYHRGT----EAGPVVNTNQNQVVDIEELVSLAKTHQFCPYYHSRGEAPQAELVLMPYNYLLDPNSRRGVKV 690 MP + I G +VDFPF+ YDCQ YM V+E+L T +NALLESPTGTGKTLCLLC+TLAW+ F ++ KG KG+ +D G P Q++ G+PTI+Y+SRTHSQL QV++ELK T YRP++++LGSREQLC+HDDV+ L+G+A +AC + R+CK+ R + P + ++ VDIE+LV++ ++H CPYY SR ++V PYNYL+D +R + + Sbjct: 1 MPIYKIRGINVDFPFEAYDCQIVYMEKVIESLQTKSNALLESPTGTGKTLCLLCATLAWRKSLGAFSHGVSAFKG--KGN---KDDG---PSSQSEKKQTGLPTIVYTSRTHSQLQQVIQELKRTNYRPKMTVLGSREQLCIHDDVQMLQGKAQTNACHFICKKRECKHQRQVPDYLKGNPYLG---DEPVDIEDLVNIGRSHGACPYYVSRELHKVVDIVFAPYNYLIDHGNRGSLAI 228
BLAST of mRNA_C-tenellus_contig8277.1.1 vs. uniprot
Match: A0A7F8R8A6_LEPWE (regulator of telomere elongation helicase 1 n=1 Tax=Leptonychotes weddellii TaxID=9713 RepID=A0A7F8R8A6_LEPWE) HSP 1 Score: 210 bits (535), Expect = 3.780e-64 Identity = 109/236 (46.19%), Postives = 145/236 (61.44%), Query Frame = 1 Query: 1 MPTFDINGTDVDFPFQPYDCQFTYMRSVMEALNTPTNALLESPTGTGKTLCLLCSTLAWQ--FKASLAVKKGGQK--GSL----AYEDPGQAPPLPQTQSMPVGVPTIIYSSRTHSQLAQVVKELKNTTYRPRLSLLGSREQLCVHDDVRRLKGQAMN-HACGALVSGRQCKYHRGTEAGPVVNTNQNQVVDIEELVSLAKTHQFCPYYHSRGEAPQAELVLMPYNYLLDPNSRRG 681 MP +NG VDFPFQPY CQ YM V+E L N LLESPTGTGKTLCLLC+TLAW+ + +++ +K ++ G L G A T + + +P IIY+SRTHSQL QV+ EL+NT+YRPR+ +LGSREQLC+H +V++ + M H C V+ R C+++ E + ++DIE+LV H CPYY SR QA+++ MPYNYLLD SRR Sbjct: 1 MPKIALNGVTVDFPFQPYPCQEEYMSKVLECLQKKVNGLLESPTGTGKTLCLLCTTLAWREHLRDTISARKIAERAQGELFPDRTLSSWGLAASDGDTTACYMDIPKIIYASRTHSQLTQVISELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQIHLCRKKVASRSCRFYNNVEEKSLQQELATPILDIEDLVRSGNKHGLCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 236
BLAST of mRNA_C-tenellus_contig8277.1.1 vs. uniprot
Match: A0A4W5K8S7_9TELE (Helicase ATP-binding domain-containing protein n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5K8S7_9TELE) HSP 1 Score: 210 bits (535), Expect = 6.770e-64 Identity = 109/237 (45.99%), Postives = 144/237 (60.76%), Query Frame = 1 Query: 1 MPTFDINGTDVDFPFQPYDCQFTYMRSVMEALNTPTNALLESPTGTGKTLCLLCSTLAWQ--FKASLAVKKGGQKGSLAYEDP-------GQAPPLPQTQSMPVGVPTIIYSSRTHSQLAQVVKELKNTTYRPRLSLLGSREQLCVHDDVRRLKGQAMN-HACGALVSGRQCKYHRGTEAGPVVNTNQNQVVDIEELVSLAKTHQFCPYYHSRGEAPQAELVLMPYNYLLDPNSRRG 681 MP + G VDFPF PY+CQ YM V+E L N +LESPTGTGKTLCLLC+TLAW+ FK +++ +K +K A P G A T + +P IIY+SRTHSQL QV+ ELKNT+YRP++ +LGSREQLC++ +V R + + H C +S R C ++ E + N ++D+E+LV + CPYY SR QAE++ MPYNYLLDP SRR Sbjct: 1 MPPLTLKGITVDFPFTPYECQKDYMSKVIECLQNKVNGVLESPTGTGKTLCLLCATLAWRDYFKDTISARKIAEKMGGAELFPNTPLASWGTAATDGDTTTYYTDIPKIIYASRTHSQLTQVINELKNTSYRPKVCVLGSREQLCINPEVMRQESNHLKVHMCRQKISSRSCVFYNNVEEKSMDKDLVNSILDVEDLVKAGNKQRVCPYYLSRSLKQQAEIIFMPYNYLLDPKSRRA 237
BLAST of mRNA_C-tenellus_contig8277.1.1 vs. uniprot
Match: UPI000778E3EB (regulator of telomere elongation helicase 1 n=1 Tax=Python bivittatus TaxID=176946 RepID=UPI000778E3EB) HSP 1 Score: 212 bits (539), Expect = 7.420e-64 Identity = 110/237 (46.41%), Postives = 144/237 (60.76%), Query Frame = 1 Query: 1 MPTFDINGTDVDFPFQPYDCQFTYMRSVMEALNTPTNALLESPTGTGKTLCLLCSTLAWQ--FKASLAVKKGGQK--GSLAYEDP-----GQAPPLPQTQSMPVGVPTIIYSSRTHSQLAQVVKELKNTTYRPRLSLLGSREQLCVHDDVRRLKGQAMN-HACGALVSGRQCKYHRGTEAGPVVNTNQNQVVDIEELVSLAKTHQFCPYYHSRGEAPQAELVLMPYNYLLDPNSRRG 681 MP +NG +DFPF PY CQ YM V+E L N +LESPTGTGKTLCLLCS LAWQ FK +++ +K Q+ G+ + D G+A + VP IIY+SRTHSQL QV+ ELKNT YRP++ +LGSR+QLC+H +V+R + M H C V+ R C ++ E N ++DIE+L+ H+ CPYY SR QA+++ MPYNYLLD SRR Sbjct: 1 MPKIKLNGITIDFPFPPYKCQEEYMSKVLECLQKQVNGILESPTGTGKTLCLLCSALAWQGHFKDAVSAQKIAQRLNGAELFSDQPLSSWGKAVTGTDVPAYYSDVPKIIYASRTHSQLTQVISELKNTVYRPKVCVLGSRDQLCIHPEVKRQENNHMQIHLCRLKVTARMCHFYNNVEEKSTEKDLINPILDIEDLIKNGNKHRVCPYYLSRNLKQQADIIFMPYNYLLDSKSRRS 237
BLAST of mRNA_C-tenellus_contig8277.1.1 vs. uniprot
Match: C4J9W5_MAIZE (Helicase ATP-binding domain-containing protein n=1 Tax=Zea mays TaxID=4577 RepID=C4J9W5_MAIZE) HSP 1 Score: 208 bits (529), Expect = 1.210e-63 Identity = 112/239 (46.86%), Postives = 149/239 (62.34%), Query Frame = 1 Query: 1 MPTFDINGTDVDFPFQPYDCQFTYMRSVMEALNTPTNALLESPTGTGKTLCLLCSTLAWQ--FKASLAVKKGGQKGSLAYEDPGQAPPLPQTQSMPVG-------VPTIIYSSRTHSQLAQVVKELKNTTYRPRLSLLGSREQLCVHDDVRRLKGQAMNHACGALVSGRQCKYHRGTEAGPVVNTNQ--NQVVDIEELVSLAKTHQFCPYYHSRGEAPQAELVLMPYNYLLDPNSRRGV 684 MP + I G +VDFPF YDCQ TYM V+E+L NALLESPTGTGKTLCLLC++LAW+ F L V +GG G G P Q P IIY+SRTHSQL QV+KELK T+YRP++++LGSREQ+C+HD+V +L G+A N+AC L R+C H A + N + N+ DIE+L+++ + CPYY SR + +++ PYNYL+DP +RR + Sbjct: 1 MPVYSIRGVNVDFPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAWRRTFGEFLRVGRGG--GGTKQLPYGSQPSASQQSEDSTSQKQQQSRYPVIIYASRTHSQLRQVIKELKATSYRPKMAVLGSREQMCIHDEVSKLHGRAQNNACHFLCKKRRCP-HNNHVAEFIKNKPELGNEPFDIEDLINIGRHKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSL 236
BLAST of mRNA_C-tenellus_contig8277.1.1 vs. uniprot
Match: A0A093GG69_DRYPU (Regulator of telomere elongation helicase 1 (Fragment) n=2 Tax=Dryobates pubescens TaxID=118200 RepID=A0A093GG69_DRYPU) HSP 1 Score: 217 bits (552), Expect = 2.470e-63 Identity = 114/237 (48.10%), Postives = 145/237 (61.18%), Query Frame = 1 Query: 1 MPTFDINGTDVDFPFQPYDCQFTYMRSVMEALNTPTNALLESPTGTGKTLCLLCSTLAWQ--FKASLAVKKGGQK---GSLAYEDP----GQAPPLPQTQSMPVGVPTIIYSSRTHSQLAQVVKELKNTTYRPRLSLLGSREQLCVHDDVRRLKGQAMN-HACGALVSGRQCKYHRGTEAGPVVNTNQNQVVDIEELVSLAKTHQFCPYYHSRGEAPQAELVLMPYNYLLDPNSRRG 681 MP +NG VDFPF+PY CQ YM V+E L N +LESPTGTGKTLCLLCSTLAW+ FK S+ +K Q+ G L P G A P + + VP IIY+SRTHSQL QV+ ELKNT YRP++ +LGSREQLC++ +V+RL+ M + C + V R C ++ E ++DIE+LV H+ CPYY SR QAE++ MPYNYLLD SR+ Sbjct: 1 MPRLTLNGITVDFPFEPYPCQEVYMEKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWREHFKDSITARKIAQRMAGGELFPGRPLCSWGTAAPEEEASTYYTDVPKIIYASRTHSQLTQVINELKNTAYRPKICVLGSREQLCINPEVKRLQSNHMQIYTCRSKVMNRACHFYTNVEEKSTDKELMKSIMDIEDLVKNGSKHRACPYYLSRSLKQQAEVIFMPYNYLLDSKSRKS 237
BLAST of mRNA_C-tenellus_contig8277.1.1 vs. uniprot
Match: V8NB43_OPHHA (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Ophiophagus hannah TaxID=8665 RepID=V8NB43_OPHHA) HSP 1 Score: 208 bits (529), Expect = 4.970e-63 Identity = 111/233 (47.64%), Postives = 144/233 (61.80%), Query Frame = 1 Query: 1 MPTFDINGTDVDFPFQPYDCQFTYMRSVMEALNTPTNALLESPTGTGKTLCLLCSTLAWQ--FKASLAVKKGGQKGSLAYEDPGQAPPLPQTQSMPVG---------VPTIIYSSRTHSQLAQVVKELKNTTYRPRLSLLGSREQLCVHDDVRRLKGQAMN-HACGALVSGRQCKYHRGTEAGPVVNTNQNQVVDIEELVSLAKTHQFCPYYHSRGEAPQAELVLMPYNYLLD 663 MP +NG +DFPF PY CQ +YM V+E L N +LESPTGTGKTLCLLCSTLAW+ FK +++ +K Q+ A P Q PL S G VP IIY+SRTHSQLAQV+ ELKNT YRP++ +LGSR+QLC+H +V++ + M H C +S R C ++ E + ++DIE+LV K H+ CPYY SR QA+++ MPYNYLLD Sbjct: 1 MPKIKLNGITIDFPFPPYKCQESYMSKVLECLQKQVNGILESPTGTGKTLCLLCSTLAWRAHFKDAVSAQKIAQRLKGAELFPNQ--PLSSWGSAVTGTEVPAYYTDVPKIIYASRTHSQLAQVIGELKNTVYRPKVCVLGSRDQLCIHPEVKKQENNHMQIHLCRMKMSSRSCHFYNNLEEKGTEKDLIDPILDIEDLVKNGKKHRVCPYYLSRSLKQQADIIFMPYNYLLD 231 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8277.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8277.1.1 >prot_C-tenellus_contig8277.1.1 ID=prot_C-tenellus_contig8277.1.1|Name=mRNA_C-tenellus_contig8277.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=230bp MPTFDINGTDVDFPFQPYDCQFTYMRSVMEALNTPTNALLESPTGTGKTLback to top mRNA from alignment at C-tenellus_contig8277:727..3291- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8277.1.1 ID=mRNA_C-tenellus_contig8277.1.1|Name=mRNA_C-tenellus_contig8277.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2565bp|location=Sequence derived from alignment at C-tenellus_contig8277:727..3291- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8277:727..3291- >mRNA_C-tenellus_contig8277.1.1 ID=mRNA_C-tenellus_contig8277.1.1|Name=mRNA_C-tenellus_contig8277.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=690bp|location=Sequence derived from alignment at C-tenellus_contig8277:727..3291- (Choristocarpus tenellus KU2346)back to top |