mRNA_C-tenellus_contig8253.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8253.1.1 vs. uniprot
Match: W4GGJ8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGJ8_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.470e-38 Identity = 58/105 (55.24%), Postives = 79/105 (75.24%), Query Frame = 1 Query: 7 ECILQQDNAPIHVSKVTKEWFQEHDIHVLEWPPKSSDLNPMDNLWGIMAHKVYAHGKQYSSCFELMECAKKAWDNIEVETMEKLVSSMTKRCIQVIERKGAKTSY 321 ECI Q DNA IH SK TKE+ EH++HV++WP KS DLNP++N+WG++A VYAHG+Q++S EL+ KAWD I + ++KL+ SM KRC+ V+E KG+KT Y Sbjct: 145 ECIFQHDNASIHASKETKEFLNEHNVHVMDWPAKSPDLNPIENIWGVLARAVYAHGRQFASKNELIAAILKAWDGIGQDLIDKLLKSMQKRCVSVLELKGSKTKY 249
BLAST of mRNA_C-tenellus_contig8253.1.1 vs. uniprot
Match: A0A6A5AIH4_9STRA (DDE_3 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AIH4_9STRA) HSP 1 Score: 132 bits (333), Expect = 9.890e-37 Identity = 58/107 (54.21%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 1 GGECILQQDNAPIHVSKVTKEWFQEHDIHVLEWPPKSSDLNPMDNLWGIMAHKVYAHGKQYSSCFELMECAKKAWDNIEVETMEKLVSSMTKRCIQVIERKGAKTSY 321 G ECI QQDNA IH S TKE+ + H++ V+EWP KS DLNP++N+WG++A VYAHG+Q++S +L+ KAWD I + +EKL+ SM KRCI V+E +G KT Y Sbjct: 112 GRECIFQQDNASIHGSTETKEFLEAHNVRVMEWPAKSPDLNPIENMWGVLARAVYAHGRQFASKTDLIAAILKAWDEIGQDLIEKLLRSMQKRCISVLELEGGKTKY 218
BLAST of mRNA_C-tenellus_contig8253.1.1 vs. uniprot
Match: A0A6A4Z4M8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z4M8_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.940e-36 Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 1 GGECILQQDNAPIHVSKVTKEWFQEHDIHVLEWPPKSSDLNPMDNLWGIMAHKVYAHGKQYSSCFELMECAKKAWDNIEVETMEKLVSSMTKRCIQVIERKGAKTSY 321 G ECI QQDNA IH SK TKE+ + H++ V+EWP KS DLNP++N+WG++A VYAHG+Q++S L+ KAWD I + +EKL+ SM KRCI V+E KG KT Y Sbjct: 226 GRECIFQQDNASIHGSKETKEFLEAHNVRVMEWPAKSPDLNPIENMWGVLARAVYAHGRQFASKTGLIAAILKAWDEIGQDLIEKLLRSMQKRCISVLELKGGKTKY 332
BLAST of mRNA_C-tenellus_contig8253.1.1 vs. uniprot
Match: A0A6A4Z9M4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9M4_9STRA) HSP 1 Score: 125 bits (315), Expect = 7.030e-33 Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 1 Query: 1 GGECILQQDNAPIHVSKVTKEWFQEHDIHVLEWPPKSSDLNPMDNLWGIMAHKVYAHGKQYSSCFELMECAKKAWDNIEVETMEKLVSSMTKRCIQVIERKGAKTSY 321 G +C+ Q DNA IH S+ TK + +H + V+EWP KS DLNP++N+WGI+A VYAHG+Q+++ +L+ KAWD + +E L+ SM RC+ V+E KG KT Y Sbjct: 226 GRDCVFQHDNASIHASRETKAFLSDHGVRVMEWPAKSPDLNPIENMWGILARAVYAHGRQFATKIDLVAAISKAWDEVAQNLIENLLKSMPNRCMSVLELKGGKTKY 332
BLAST of mRNA_C-tenellus_contig8253.1.1 vs. uniprot
Match: R7QFW9_CHOCR (DDE_3 domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QFW9_CHOCR) HSP 1 Score: 124 bits (310), Expect = 7.330e-33 Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 16 LQQDNAPIHVSKVTKEWFQEHDIHVLEWPPKSSDLNPMDNLWGIMAHKVYAHGKQYSSCFELMECAKKAWDNIEVETMEKLVSSMTKRCIQVIERKGAKTSY 321 QD A +H + EWF+E ++HV++WP KS DLNP++NLWGI+A KVYAH +Q+++ EL+EC W+NI ET++KLV SM KRC KG T Y Sbjct: 154 FMQDGAAVHRANCVYEWFEEEEVHVMDWPAKSPDLNPIENLWGILARKVYAHERQFNNIDELLECIMDCWENINTETLDKLVGSMQKRCFDCAMAKGGPTKY 255
BLAST of mRNA_C-tenellus_contig8253.1.1 vs. uniprot
Match: R7Q5P2_CHOCR (DDE_3 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5P2_CHOCR) HSP 1 Score: 121 bits (303), Expect = 1.900e-32 Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 1 GGECILQQDNAPIHVSKVTKEWFQEHDIHVLEWPPKSSDLNPMDNLWGIMAHKVYAHGKQYSSCFELMECAKKAWDNIEVETMEKLVSSMTKRCIQVIERKGAKTSY 321 G QD A +H + EWF+E ++HV++WP KS DLNP++NLW I+A KVYAH +Q+++ EL+EC W+NI ET++KL+ SM KRC KG T Y Sbjct: 91 GSSWTFMQDGAAVHRANCVYEWFEEEEVHVMDWPAKSPDLNPIENLWEILARKVYAHERQFNNIDELLECIMDCWENINTETLDKLLGSMQKRCFYCAMAKGGPTKY 197
BLAST of mRNA_C-tenellus_contig8253.1.1 vs. uniprot
Match: H3G9W0_PHYRM (DDE_3 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9W0_PHYRM) HSP 1 Score: 121 bits (303), Expect = 2.060e-32 Identity = 53/107 (49.53%), Postives = 73/107 (68.22%), Query Frame = 1 Query: 1 GGECILQQDNAPIHVSKVTKEWFQEHDIHVLEWPPKSSDLNPMDNLWGIMAHKVYAHGKQYSSCFELMECAKKAWDNIEVETMEKLVSSMTKRCIQVIERKGAKTSY 321 G + + QQDNA IH S+ TK +F+E + V++WP +S DLNP++NLW IM+ VY +G+QY S L + AWDNI ET+ L++ M +RCI+VIERKG K Y Sbjct: 94 GVDFVFQQDNAAIHTSRETKAFFEEQGVQVMDWPARSPDLNPIENLWVIMSRDVYRNGRQYDSVTSLTKALHTAWDNISAETISTLINFMPRRCIEVIERKGNKAHY 200
BLAST of mRNA_C-tenellus_contig8253.1.1 vs. uniprot
Match: H3G5W4_PHYRM (DDE_3 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5W4_PHYRM) HSP 1 Score: 119 bits (299), Expect = 2.520e-32 Identity = 54/107 (50.47%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 1 GGECILQQDNAPIHVSKVTKEWFQEHDIHVLEWPPKSSDLNPMDNLWGIMAHKVYAHGKQYSSCFELMECAKKAWDNIEVETMEKLVSSMTKRCIQVIERKGAKTSY 321 G + I QQDNA IH SK TKE+F E DI +L+WP KS DLNP++NLW IM+ +VYA+G+Q+ S +L AW++I + L+ SM +RCI+V+++KG KT Y Sbjct: 51 GIDFIFQQDNASIHASKRTKEFFSEQDIRLLDWPSKSPDLNPIENLWSIMSRRVYANGRQFDSVPQLKAALFAAWESIPHALLMSLIESMPRRCIEVLDKKGNKTHY 157
BLAST of mRNA_C-tenellus_contig8253.1.1 vs. uniprot
Match: A0A225VGS8_9STRA (Transposase (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VGS8_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.040e-32 Identity = 58/108 (53.70%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 1 GGECILQQDNAPIHVSKVTKEWFQEHDIHVLEWPPKSSDLNPMDNLWGIMAHKVYAHGK-QYSSCFELMECAKKAWDNIEVETMEKLVSSMTKRCIQVIERKGAKTSY 321 G E I QQDNA IH S+ T E+F+E DI V++WP +S DLNP++NLW I++ VY +GK QY+S F+L A +AWD ++ E +EKLV SM KR ++V+E KG KT Y Sbjct: 210 GTEYIFQQDNASIHTSECTTEFFEEQDITVMKWPARSPDLNPIENLWAILSRIVYDNGKKQYTSVFDLRVAALQAWDLVDQEVLEKLVDSMPKRLVEVLEMKGGKTHY 317
BLAST of mRNA_C-tenellus_contig8253.1.1 vs. uniprot
Match: A0A016SQ41_9BILA (DDE_3 domain-containing protein n=1 Tax=Ancylostoma ceylanicum TaxID=53326 RepID=A0A016SQ41_9BILA) HSP 1 Score: 118 bits (295), Expect = 4.540e-32 Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 16 LQQDNAPIHVSKVTKEWFQEHDIHVLEWPPKSSDLNPMDNLWGIMAHKVYAHGKQYSSCFELMECAKKAWDNIEVETMEKLVSSMTKRCIQVIERKGAKTSY 321 QQDNA +HV+ TK WF H I +++WP S DLNP++NLWGI+A +VYA+ +QYSS EL ++AWD+IE T++ LV M +R +VI KG T Y Sbjct: 28 FQQDNATVHVASSTKSWFNRHHIRLMDWPACSPDLNPIENLWGILARRVYANARQYSSVAELETAVRQAWDSIESSTLKNLVDGMQRRIFEVIYNKGGPTKY 129 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8253.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8253.1.1 >prot_C-tenellus_contig8253.1.1 ID=prot_C-tenellus_contig8253.1.1|Name=mRNA_C-tenellus_contig8253.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=108bp GGECILQQDNAPIHVSKVTKEWFQEHDIHVLEWPPKSSDLNPMDNLWGIMback to top mRNA from alignment at C-tenellus_contig8253:48..371+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8253.1.1 ID=mRNA_C-tenellus_contig8253.1.1|Name=mRNA_C-tenellus_contig8253.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=324bp|location=Sequence derived from alignment at C-tenellus_contig8253:48..371+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8253:48..371+ >mRNA_C-tenellus_contig8253.1.1 ID=mRNA_C-tenellus_contig8253.1.1|Name=mRNA_C-tenellus_contig8253.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=324bp|location=Sequence derived from alignment at C-tenellus_contig8253:48..371+ (Choristocarpus tenellus KU2346)back to top |