mRNA_C-tenellus_contig8244.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8244.1.1 vs. uniprot
Match: D7G1B5_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B5_ECTSI) HSP 1 Score: 147 bits (370), Expect = 7.060e-40 Identity = 69/95 (72.63%), Postives = 82/95 (86.32%), Query Frame = 1 Query: 13 RWERSGEGRARLYVPAIGAFLGAPTIALVLLVPGFYSSMFFLFVEYLVAESWFGPAISVLQNALPPRARGVGVGTYSFLTTVAGSFITYLLGVIL 297 RWE++G+ RAR+Y+PAIGA LGAPT LV++ P FY +MFFLFVEYLVAE WFGPAISVLQ ALP R RGVG+G YSF TT+AGSF+TY++GVIL Sbjct: 321 RWEKAGQHRARMYIPAIGALLGAPTFFLVIVTPNFYGAMFFLFVEYLVAECWFGPAISVLQKALPARVRGVGIGYYSFFTTIAGSFMTYIVGVIL 415
BLAST of mRNA_C-tenellus_contig8244.1.1 vs. uniprot
Match: A0A7S2XUC5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUC5_9STRA) HSP 1 Score: 103 bits (258), Expect = 5.440e-24 Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 16 WERSGEGRARLYVPAIGAFLGAPTIALVLLVPGFYSSMFFLFVEYLVAESWFGPAISVLQNALPPRARGVGVGTYSFLTTVAGSFITYLLGVI 294 WE+SG+ AR+++PAIGA P + + +L FY SM LF EYL AE WFGP +SVLQ+AL PR RG+G+ Y+F TT+ GS ++Y++GVI Sbjct: 324 WEKSGQRNARVWIPAIGAIASLPFMMMCVLSGNFYLSMAGLFFEYLFAECWFGPIMSVLQSALSPRVRGIGIAAYTFTTTMLGSLMSYVMGVI 416
BLAST of mRNA_C-tenellus_contig8244.1.1 vs. uniprot
Match: A0A836CG38_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG38_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.580e-20 Identity = 49/93 (52.69%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 13 RWERSGEGRARLYVPAIGAFLGAPTIALVLLVPGFYSSMFFLFVEYLVAESWFGPAISVLQNALPPRARGVGVGTYSFLTTVAGSFITYLLGV 291 +W SG+ RA L VPAIGA P +AL L P F SM LF+EYL AE WFGPA+S LQ ALP AR GV ++ TT+AGS + +GV Sbjct: 303 KWGASGQRRANLLVPAIGAAAAVPALALALYAPSFGLSMAGLFLEYLAAECWFGPAMSALQGALPAGARATGVAAFTLATTLAGSAAAWAVGV 395
BLAST of mRNA_C-tenellus_contig8244.1.1 vs. uniprot
Match: A0A7S2CKQ1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKQ1_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.970e-19 Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 37 RARLYVPAIGAFLGAPTIALVLLVPGFYSSMFF-LFVEYLVAESWFGPAISVLQNALPPRARGVGVGTYSFLTTVAGSFITYLLG 288 +A YVPAIG LG P IA+ L FY SM LF+EYLVAE WFGP +S LQ++LPPR RG+G+ F T GS ++Y +G Sbjct: 70 KANYYVPAIGCLLGCPFIAICCLSSNFYVSMLCGLFLEYLVAECWFGPYMSALQSSLPPRVRGLGISVMMFSATFFGSLMSYAIG 154
BLAST of mRNA_C-tenellus_contig8244.1.1 vs. uniprot
Match: A0A7S2Y1D3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1D3_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 5.890e-18 Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 13 RWERSGEGRARLYVPAIGAFLGAPTIALVLLVPGFYSSMFFLFVEYLVAESWFGPAISVLQNALPPRARGVGVGTYSFLTTVAGSFITYLLG 288 RWE SG AR++VPA+G+ L P + L + F+ +M L+ E+L AE WFGP +SV+Q+ LPPR GV ++ L+T GS T+++G Sbjct: 296 RWEMSGGRHARVWVPALGSLLACPFVVLTMAASNFHVAMMGLYFEFLFAECWFGPTMSVIQSTLPPRLFATGVSVFACLSTFMGSLATWVMG 387
BLAST of mRNA_C-tenellus_contig8244.1.1 vs. uniprot
Match: A0A835YUX0_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUX0_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.100e-17 Identity = 44/92 (47.83%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 13 RWERSGEGRARLYVPAIGAFLGAPTIALVLLVPGFYSSMFFLFVEYLVAESWFGPAISVLQNALPPRARGVGVGTYSFLTTVAGSFITYLLG 288 RW +G+ RA L +P GA P +A L P F SM LF EYL AE W GPA+S LQ ALPP ARG G+G ++ T +AGS + +G Sbjct: 306 RWAAAGQRRAYLLIPGAGAAAAVPLLAAALYAPSFGLSMAALFAEYLCAEVWSGPAVSALQGALPPGARGTGMGVFALGTGLAGSAAAWAVG 397
BLAST of mRNA_C-tenellus_contig8244.1.1 vs. uniprot
Match: A0A7S2WU90_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU90_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 4.380e-17 Identity = 46/93 (49.46%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 13 RWERSGEGRARLYVPAIGAFLGAPTIALVLLVPGFYSSMFF-LFVEYLVAESWFGPAISVLQNALPPRARGVGVGTYSFLTTVAGSFITYLLG 288 RW G +A YVP IGA LG P I + L FY S+ LF+EYLVAE WFGP +S LQ +PP RG+ V T F+ T GS ++YL+G Sbjct: 332 RWP--GAEKANYYVPMIGALLGIPFICICCLASDFYVSLCVGLFLEYLVAECWFGPYMSALQEGVPPTMRGLAVATMMFMATFFGSLMSYLIG 422
BLAST of mRNA_C-tenellus_contig8244.1.1 vs. uniprot
Match: A0A7S4E4V1_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4V1_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 8.830e-15 Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 1 MCEARWERSGEGRARLYVPAIGAFLGAPTIALVLLVPGFYSSMFF-LFVEYLVAESWFGPAISVLQNALPPRARGVGVGTYSFLTTVAGSFITYLLGVI 294 M +W R+ E RAR+Y+P G F P +A+ L FY S+F LFVEYL+AE WFGP ++ +Q+AL R + + ++ + T GS +Y+LG I Sbjct: 316 MLADKW-RAVEPRARMYLPVCGCFGSLPFMAICCLASDFYVSIFLGLFVEYLIAECWFGPVVATMQSALEADCRALAIACFTLIATFFGSLASYILGYI 413
BLAST of mRNA_C-tenellus_contig8244.1.1 vs. uniprot
Match: A0A2R5G269_9STRA (Hexuronate transporter n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G269_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 2.810e-13 Identity = 40/92 (43.48%), Postives = 51/92 (55.43%), Query Frame = 1 Query: 13 RWERSGEGRARLYVPAIGAFLGAPTIALVLLVPGFYSSMFFLFVEYLVAESWFGPAISVLQNALPPRARGVGVGTYSFLTTVAGSFITYLLG 288 RW R+ + R +VPAI G VL FY +MF L +EYL+AE WFGPAIS+LQ+ LP RG + Y F+ + GS LG Sbjct: 384 RWRRT-DPRGAAWVPAIAGACGFIPFLGVLFADNFYLAMFSLMLEYLIAEGWFGPAISILQSRLPGTVRGTSISIYMFVAGLVGSLAPSALG 474
BLAST of mRNA_C-tenellus_contig8244.1.1 vs. uniprot
Match: A0A7S2AAR9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAR9_TRICV) HSP 1 Score: 70.9 bits (172), Expect = 8.710e-13 Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 13 RWERSGEGRARLYVPAIGAFLGAPTIALVLLVPGFYSSMFFLFVEYLVAESWFGPAISVLQNALPPRARGVGVGTYSFLTTVAGSFITYLLGVI 294 RW GE RL VP +G+ L AP L F +M +L +EYLVAE WFGP +SVLQ+++ PR G G ++ LT G+ LLGV+ Sbjct: 126 RWGLRGERAGRLAVPIVGSTLAAPAWYLTATSGTFEGAMAWLAIEYLVAECWFGPVVSVLQSSVGPRRGGTAQGMFT-LTGAVGNLAPSLLGVL 218 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8244.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8244.1.1 >prot_C-tenellus_contig8244.1.1 ID=prot_C-tenellus_contig8244.1.1|Name=mRNA_C-tenellus_contig8244.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=99bp MCEARWERSGEGRARLYVPAIGAFLGAPTIALVLLVPGFYSSMFFLFVEYback to top mRNA from alignment at C-tenellus_contig8244:132..739+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8244.1.1 ID=mRNA_C-tenellus_contig8244.1.1|Name=mRNA_C-tenellus_contig8244.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=608bp|location=Sequence derived from alignment at C-tenellus_contig8244:132..739+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8244:132..739+ >mRNA_C-tenellus_contig8244.1.1 ID=mRNA_C-tenellus_contig8244.1.1|Name=mRNA_C-tenellus_contig8244.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=297bp|location=Sequence derived from alignment at C-tenellus_contig8244:132..739+ (Choristocarpus tenellus KU2346)back to top |