mRNA_C-tenellus_contig7970.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7970.2.1 vs. uniprot
Match: D7FVW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVW4_ECTSI) HSP 1 Score: 252 bits (644), Expect = 6.620e-80 Identity = 124/189 (65.61%), Postives = 142/189 (75.13%), Query Frame = 1 Query: 1 GHFRLTNLLLPKVLQSKDGRVINVSSSAHMIPQSINWDDLNASKPGSYGPWSAYGLSKLSNILFTKELQKRLDKRGGGSSTVTCMALHPGACRTELGRYIFDPSQAVNPLLLPLLGAATLVTRSPKEGAQTQICCAADPLLGCKGGSKSGGGQYFTAPKFMETPSTLARDPENALRMWKETEALVGGFS 567 GHFRLT+LL+P +L+S D RV+NV+SSAH+ S+ WDDLNA PG+Y PW AYGLSKLSNI FTK LQ+R+D +GG ++T LHPGACRTELGRY+FDPSQ NPL+ P L A TLVT+S KEGAQTQI CAADP LG KG S GG YF PK E PS LARDPE A RMW +E LVG FS Sbjct: 225 GHFRLTSLLMPALLKSPDARVVNVASSAHLFASSVEWDDLNAQAPGAYAPWKAYGLSKLSNIYFTKALQRRVDSKGG---SITATTLHPGACRTELGRYLFDPSQPANPLVYPALAALTLVTKSSKEGAQTQIACAADPALG-KG--SSAGGTYFVGPKISELPSELARDPEAAERMWAASEKLVGKFS 407
BLAST of mRNA_C-tenellus_contig7970.2.1 vs. uniprot
Match: A0A7S2UUD6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUD6_9STRA) HSP 1 Score: 152 bits (383), Expect = 4.100e-41 Identity = 90/187 (48.13%), Postives = 121/187 (64.71%), Query Frame = 1 Query: 1 GHFRLTNLLLPKVLQSKDG-RVINVSSSAHMIPQSINWDDLNASKPGSYGPWSAYGLSKLSNILFTKELQKRLDKRGGGSSTVTCMALHPGACRTELGRYIFDPSQAVNPLLLPLLGAATLVTRSPKEGAQTQICCAADPLLGCKGGSKSGGGQYFTAPKFMETPSTLARDPENALRMWKETEALVG 558 GHF LT+LLL K+ ++K G R++NVSS AH + +N+DDL A K Y PW+AYG SKLSNILFTKELQKRL++ G ++TC A HPG RTELGRY+ P A PLL+PL+ T+S K GAQTQ+ +A+ L ++ GG Y+ K + P+ A+D E A ++WK +E +G Sbjct: 210 GHFYLTSLLLDKIRKAKAGARIVNVSSEAHRFVKEVNFDDLMAEK--EYAPWTAYGQSKLSNILFTKELQKRLNQAG---DSITCTACHPGGVRTELGRYLDIPVWAY-PLLVPLV----YFTKSVKMGAQTQVFLSAEQSLT----PQNSGGLYYDNCKAKD-PTAGAKDMEAAAKLWKVSEEYLG 381
BLAST of mRNA_C-tenellus_contig7970.2.1 vs. uniprot
Match: A0A835ZD35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD35_9STRA) HSP 1 Score: 149 bits (376), Expect = 5.960e-41 Identity = 91/200 (45.50%), Postives = 117/200 (58.50%), Query Frame = 1 Query: 1 GHFRLTNLLLPKVLQSKDGRVINVSSSAHMIPQS-INWD-DLNASKPGSYGPWSAYGLSKLSNILFTKELQKRL-DKRGGGSSTVTCMALHPGACRTELGRYIFDPSQAVNP-----------LLLPLLGAATLVTRSPKEGAQTQICCAADPLLGCKGGSKSGGGQYFTAPKFMETPSTLARDPENALRMWKETEALVG 558 GHF LT LL K+ +S DGRV++VSS AH IP +N D DLN K Y W AY SKL+NILF +EL +R+ + GGG VT M +HPGACRT+LGRY+FD + ++NP LL+ +A + R+P +GAQT + CA P LG S +GGG YF P+ A D A +W E+E LVG Sbjct: 100 GHFLLTGLLFDKLKRSPDGRVVSVSSEAHKIPPGQLNPDGDLNFEKT-PYSAWPAYSQSKLANILFIRELDRRVREAAGGGRPAVTAMVVHPGACRTDLGRYLFD-ANSINPAAALVASPILALLVATTKSANQLRRAPLQGAQTAVHCATSPALG----SGAGGGTYFL-DTHAARPAAPALDAAAARALWSESERLVG 292
BLAST of mRNA_C-tenellus_contig7970.2.1 vs. uniprot
Match: A0A0G4H233_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H233_9ALVE) HSP 1 Score: 146 bits (369), Expect = 5.040e-39 Identity = 88/189 (46.56%), Postives = 113/189 (59.79%), Query Frame = 1 Query: 1 GHFRLTNLLLPKVLQSKDGRVINVSSSAHMIPQSINWDDLNASKPGSYGPWSAYGLSKLSNILFTKELQKRLDKRGGGSSTVTCMALHPGACRTELGRYIFDPSQAVNPL---LLPLLGAATLVTRSPKEGAQTQICCAADPLLGCKGGSKSGGGQYFTAPKFMETPSTLARDPENALRMWKETEALVG 558 GHF LT+LLL V ++ GRV+NVSS AH + +DL +K G+Y PW AYG SKL+NILFT+EL +RL R S VT +A HPG RTELGRY F+ + PL L+P L +RSP+ GAQTQI C+AD + S G YF K + S +RD E+A ++WKE+ L G Sbjct: 207 GHFLLTSLLLENVAKASKGRVVNVSSRAHELASPDWLEDLQLTKEGAYDPWKAYGRSKLANILFTRELDRRL--RAANSDIVT-LACHPGLVRTELGRYFFNGDN-LGPLAIGLVPFLPIGIYASRSPERGAQTQIFCSADDRV------LSESGDYFANCK-VNPGSDASRDFESAAKLWKESVRLTG 384
BLAST of mRNA_C-tenellus_contig7970.2.1 vs. uniprot
Match: L1JAU5_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JAU5_GUITC) HSP 1 Score: 142 bits (358), Expect = 1.080e-37 Identity = 92/207 (44.44%), Postives = 117/207 (56.52%), Query Frame = 1 Query: 1 GHFRLTNLLLPKVLQ----SKDGRVINVSSSAHMIP-QSINWDDLNASKPGSYGPWSAYGLSKLSNILFTKELQKRLDKRGGGSSTVTCMALHPGACRTELGRYIFDPSQAVNPL-------LLP---------LLGAATLVTRSPKEGAQTQICCAADPLLGCKGGSKSGGGQYFTAPKFMETPSTLARDPENALRMWKETEALVG 558 GHF LTNLLLP++ + S D R+IN+SS AH+I +N+DDL + SY PW AYG SKL+NILFTKELQ+RL G S V+ A+HPG RTELGR F P + + L LP LL A +R P +GAQTQ+ C+ DP L K G G+YF PS A+D AL++W+ +E L G Sbjct: 157 GHFHLTNLLLPQIKKASEKSGDARIINLSSDAHLIAFNGMNFDDLQSKS--SYDPWKAYGQSKLANILFTKELQRRL----GADSPVSAAAVHPGVVRTELGRNFFLPPELCSSLGSVDCKGQLPPAALVAGAVLLPLAVYTSRDPAQGAQTQVRCSVDPELKGKLG-----GRYFR-DCHEAAPSPAAQDASAALKLWEISEELTG 351
BLAST of mRNA_C-tenellus_contig7970.2.1 vs. uniprot
Match: A0A6V1PTB0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PTB0_HETAK) HSP 1 Score: 139 bits (349), Expect = 3.620e-36 Identity = 84/187 (44.92%), Postives = 117/187 (62.57%), Query Frame = 1 Query: 1 GHFRLTNLLLPKVLQSKDGRVINVSSSAHMIPQ-SINWDDLNASKPGSYGPWSAYGLSKLSNILFTKELQKRLDKRGGGSSTVTCMALHPGACRTELGRYIFDPSQAVNPLLLPLLGAATLVTRSPKEGAQTQICCAADPLLGCKGGSKSGGGQYFTAPKFMETPSTLARDPENALRMWKETEALVG 558 GHF LTNLL+ +L+++ R++N+SS+AH IP +++++DL K Y PW AYG SKL+NILFTKELQ+RLD R + T M HPG RTELGR + P+ A+ PLL+PL+ T+S ++GAQTQ +ADP L + G G+YF + P+ A D A R+W+ +E L G Sbjct: 204 GHFLLTNLLMGSLLKAERPRIVNLSSAAHQIPPGTVDFEDLMGEK--DYQPWKAYGQSKLANILFTKELQRRLDAR---TDAATAMCCHPGGVRTELGRNLDLPAWAL-PLLVPLV----YFTKSVEQGAQTQTRLSADPAL-----HRVGAGKYFDNCAEAQ-PAPPALDAAAARRLWEVSEELTG 374
BLAST of mRNA_C-tenellus_contig7970.2.1 vs. uniprot
Match: M2Y4X3_GALSU (Protochlorophyllide reductase n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4X3_GALSU) HSP 1 Score: 128 bits (321), Expect = 2.260e-32 Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 1 GHFRLTNLLLPKVLQSKDGRVINVSSSAHMIPQSINWDDLNASKPGSYGPWSAYGLSKLSNILFTKELQKRLDKRGGGSSTVTCMALHPGACRTELGRYIFDPSQAVNPLLLPLLGAATLVTRSPKEGAQTQICCAADPLLGCKGGSKSGGGQYFTAPKFMETPSTLARDPENALRMWKETEALVG 558 GHF LTNLLL +++ S RVI VSS H + I++D+L + +Y ++AYG SKL+NILF KEL KRL ++ ++ V A+HPGA RTEL RYI S L P+L + L+ + P GAQTQI CA DP L + G+YF K TPS ARD A ++W+ +E LVG Sbjct: 166 GHFLLTNLLLDRLIASAPSRVIVVSSYGHTFGK-IDFDNLQWER--NYSGFAAYGASKLANILFVKELDKRLKQQ---NANVGVYAVHPGAVRTELARYILS-SWWKKLLAAPVLPRSYLLMKDPYHGAQTQIRCAIDPSL------QQSSGKYFADCKET-TPSAAARDARVAEKLWQVSEQLVG 337
BLAST of mRNA_C-tenellus_contig7970.2.1 vs. uniprot
Match: C3XRT8_BRAFL (Uncharacterized protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XRT8_BRAFL) HSP 1 Score: 130 bits (326), Expect = 8.840e-32 Identity = 88/189 (46.56%), Postives = 112/189 (59.26%), Query Frame = 1 Query: 1 GHFRLTNLLLPKVLQSKDGRVINVSSSAHMIPQSINWDDLNASKPGSYGPWSAYGLSKLSNILFTKELQKRLDKRGGGSSTVTCMALHPGACRTELGRYIFDPSQAVNPLLLPLLGAAT-LVTRSPKEGAQTQICCAADPLLGCKGGSKSGGGQYFT--APKFMETPSTLARDPENALRMWKETEALVG 558 GHF LTNLLL K+ +S RV+NVSS AH +IN+DD+N + +Y PW AYG SKL+N+LFTKEL ++L G VT +LHPG TEL R + LL P+L AA L +S ++GAQT I CA G +G S GQYF APK PS A+D E A R+W+ +E +VG Sbjct: 405 GHFLLTNLLLDKLKKSAPSRVVNVSSGAHE-QGAINFDDINLER--TYTPWGAYGQSKLANVLFTKELDRKLKDSG-----VTTYSLHPGVINTELSRNMDAAFGWGFTLLSPVLSAAVRLFGKSVQQGAQTTIHCAVTE--GLEGFS----GQYFADCAPKV---PSKKAQDDETARRLWEISEQMVG 576
BLAST of mRNA_C-tenellus_contig7970.2.1 vs. uniprot
Match: UPI000C252D55 (retinol dehydrogenase 13-like n=1 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C252D55) HSP 1 Score: 125 bits (313), Expect = 2.150e-31 Identity = 82/187 (43.85%), Postives = 110/187 (58.82%), Query Frame = 1 Query: 1 GHFRLTNLLLPKVLQSKDGRVINVSSSAHMIPQSINWDDLN-ASKPGSYGPWSAYGLSKLSNILFTKELQKRLDKRGGGSSTVTCMALHPGACRTELGRYIFDPSQAVNPLLLPLLGAATLVTRSPKEGAQTQICCAADPLLGCKGGSKSGGGQYFTAPKFMETPSTLARDPENALRMWKETEALVG 558 GHF LT LLLPK+ QS R++NVSS AH +P SI+ DLN S+P Y AY SKL+N+LFTKEL ++L + VT +LHPG +TELGR++ L ++G L ++P++GAQTQI CA D S G Y++ K + PSTLAR+ E A ++W E+ LVG Sbjct: 132 GHFLLTLLLLPKICQSVPARIVNVSSVAHCVPSSIDLSDLNWNSRP--YSAIGAYQQSKLANVLFTKELARKLKENN--IENVTVYSLHPGIIKTELGRHLRLR------WLWSIVGKFLL--KNPEQGAQTQIYCAVDENCA------SESGLYYSDCKVAQ-PSTLARNEEIAKKLWDESLKLVG 299
BLAST of mRNA_C-tenellus_contig7970.2.1 vs. uniprot
Match: A0A6P5B085_BRABE (retinol dehydrogenase 13-like n=2 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5B085_BRABE) HSP 1 Score: 129 bits (323), Expect = 2.490e-31 Identity = 87/190 (45.79%), Postives = 113/190 (59.47%), Query Frame = 1 Query: 1 GHFRLTNLLLPKVLQSKDGRVINVSSSAHMIPQSINWDDLNASKPGSYGPWSAYGLSKLSNILFTKELQKRLDKRGGGSSTVTCMALHPGACRTELGRYIFDPSQAVN-PLLLPLLGAATLVT-RSPKEGAQTQICCAADPLLGCKGGSKSGGGQYFT--APKFMETPSTLARDPENALRMWKETEALVG 558 GHF LTNLLL K+ S RV+ VSS+AHM I++DD+N K +Y P+SAYG SKL+NILFT EL +RL G VT +LHPG TEL R++ D S + LL P+L A L+ + P++GAQT I CA G + GQYF APK PS A+D + A R+W+ +E +VG Sbjct: 163 GHFLLTNLLLDKLKNSAPSRVVTVSSNAHMRGGKIHFDDINLEK--TYTPYSAYGQSKLANILFTTELDRRLKGTG-----VTAYSLHPGVIATELARHM-DVSFGLGFTLLKPVLRAFMLLFGKRPQQGAQTTIHCAVSE------GLEEFSGQYFADCAPK---KPSKEAQDDQTARRLWELSEEMVG 335 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7970.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7970.2.1 >prot_C-tenellus_contig7970.2.1 ID=prot_C-tenellus_contig7970.2.1|Name=mRNA_C-tenellus_contig7970.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=192bp GHFRLTNLLLPKVLQSKDGRVINVSSSAHMIPQSINWDDLNASKPGSYGPback to top mRNA from alignment at C-tenellus_contig7970:5430..6414- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7970.2.1 ID=mRNA_C-tenellus_contig7970.2.1|Name=mRNA_C-tenellus_contig7970.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=985bp|location=Sequence derived from alignment at C-tenellus_contig7970:5430..6414- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7970:5430..6414- >mRNA_C-tenellus_contig7970.2.1 ID=mRNA_C-tenellus_contig7970.2.1|Name=mRNA_C-tenellus_contig7970.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=576bp|location=Sequence derived from alignment at C-tenellus_contig7970:5430..6414- (Choristocarpus tenellus KU2346)back to top |