mRNA_C-tenellus_contig797.3.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig797.3.2
Unique NamemRNA_C-tenellus_contig797.3.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
[Close]
BLAST of mRNA_C-tenellus_contig797.3.2 vs. uniprot
Match: D8LR77_ECTSI (DUF1995 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR77_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 1.240e-102
Identity = 165/247 (66.80%), Postives = 196/247 (79.35%), Query Frame = 1 
Query:    1 QGCTRLRIDFDTSAGDEMYTKLKSSLEMAKHFTALLAEALIVD----KEGEEPKGATMTLYFPDMGSAALAKHQWQSGNDTAQYQVPEGVRFASVTSDSPLETDVGCIVLCPRNSEAEGTLKLVEKISHGNTFMVLVNPELINMGTTGYGLAGRRVRDEILSIFQTCYYLRTLPWGAVTMEYGKKYSVWQDEPKNPTGYRLLKSVRQRPLGEVLDDIYLESNSDDEPGATPKFLDSVAGFVRDFGRL 729
            +G  RLR+DFDTSAGDE YTKLK+SLEMAK FT LLAEALI      + GEE  G T+ L+FPD GSAALAK +W SG + AQ  VP GVRF +V +DSP +TDVGCI+LCP+NSEA+  L+LV+KI     FMVLVNP LINMGTTGYGLAGRR+RDEI+S FQT YYLRTLPWGAVT E+GK+Y+VWQD+  +P+GYRLLK+V +RP+GE LDDIY  +N   +  + P+FLDSVA FVRDFGRL
Sbjct:   11 EGQKRLRVDFDTSAGDETYTKLKASLEMAKQFTKLLAEALICGGGGVEGGEEGTGQTLALFFPDAGSAALAKFEWGSGTENAQ--VPAGVRFCTVKTDSPADTDVGCILLCPQNSEADFALELVKKIEARGQFMVLVNPALINMGTTGYGLAGRRIRDEIISTFQTTYYLRTLPWGAVTKEHGKRYTVWQDDADDPSGYRLLKAVSERPVGEALDDIYDIANGLADEDSAPEFLDSVAKFVRDFGRL 255
[Close]
BLAST of mRNA_C-tenellus_contig797.3.2 vs. uniprot
Match: A0A6H5KFG6_9PHAE (DUF1995 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG6_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 2.400e-101
Identity = 165/247 (66.80%), Postives = 194/247 (78.54%), Query Frame = 1 
Query:    1 QGCTRLRIDFDTSAGDEMYTKLKSSLEMAKHFTALLAEALIVDKEG----EEPKGATMTLYFPDMGSAALAKHQWQSGNDTAQYQVPEGVRFASVTSDSPLETDVGCIVLCPRNSEAEGTLKLVEKISHGNTFMVLVNPELINMGTTGYGLAGRRVRDEILSIFQTCYYLRTLPWGAVTMEYGKKYSVWQDEPKNPTGYRLLKSVRQRPLGEVLDDIYLESNSDDEPGATPKFLDSVAGFVRDFGRL 729
            +G  RLR+DFDTSAGD+ YTKLK+SLEMAK  T LLAEALI   EG    EE  G T+ L+FPD GSAALAK +W SG + AQ  VP GVRF +V +DSP +TDVGCI+LCP+NSEA+  L+LV+KI     FMVLVNP LINMG TGYGLAGRR+RDEI+S FQT YYLRTLPWGAVT EYGK+Y+VWQD+P +P+GYRLLK+V +RP GE LDDIY  +N   +  + P+FLDSVA FVRDFGRL
Sbjct:  119 EGQKRLRVDFDTSAGDDTYTKLKASLEMAKQLTKLLAEALICGGEGVEGGEEGTGQTLALFFPDAGSAALAKFEWGSGTENAQ--VPAGVRFCTVKTDSPADTDVGCILLCPQNSEADFALELVKKIEARGQFMVLVNPALINMGITGYGLAGRRIRDEIISTFQTTYYLRTLPWGAVTKEYGKRYTVWQDDPDDPSGYRLLKAVSERPAGEALDDIYNVANGLADDDSAPEFLDSVAKFVRDFGRL 363
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BLAST of mRNA_C-tenellus_contig797.3.2 vs. uniprot
Match: A0A835YKF2_9STRA (DUF1995 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKF2_9STRA)

HSP 1 Score: 241 bits (614), Expect = 9.340e-70
Identity = 122/242 (50.41%), Postives = 157/242 (64.88%), Query Frame = 1 
Query:    4 GCTRLRIDFDTSAGDEMYTKLKSSLEMAKHFTALLAEALIVDKEGEEPKGATMTLYFPDMGSAALAKHQWQSGNDTAQYQVPEGVRFASVTSDSPLETDVGCIVLCPRNSEAEGTLKLVEKISHGNTFMVLVNPELINMGTTGYGLAGRRVRDEILSIFQTCYYLRTLPWGAVTMEYGKKYSVWQDEPKNPTGYRLLKSVRQRPLGEVLDDIYLESNSDDEPGATPKFLDSVAGFVRDFGRL 729
            G   +R+DFDTS GDE YT LK SL M +   +L+A  L        P   T+ L+FPD G+AA+    W+ G  T +  VP  V F+ +  DSP  TD G +VLCPRNSEA+ TL+LVE+++    FM+LVNPEL+NM TTGYGLAGRR+RD +L+ F + YYLRTL WGAV    GK YSVWQ++     GYRLL++V  +P  E L++IY E N       TP FL++ A F+RDFGRL
Sbjct:   12 GVRNVRVDFDTSVGDETYTMLKQSLPMTQRLVSLVAPRL--------PDNGTLRLFFPDAGTAAMMVRDWRVG--TNESLVPANVAFSGMRRDSPEPTDAGILVLCPRNSEADDTLRLVEEVAAAGQFMLLVNPELVNMATTGYGLAGRRIRDLVLAKFTSAYYLRTLTWGAVAKRLGKSYSVWQEDDALEAGYRLLRNVDAKPTFEDLEEIYDEENGLSNRADTPAFLNAFADFMRDFGRL 243
[Close]
BLAST of mRNA_C-tenellus_contig797.3.2 vs. uniprot
Match: A0A7S3NLL6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLL6_9STRA)

HSP 1 Score: 178 bits (451), Expect = 3.570e-46
Identity = 94/225 (41.78%), Postives = 133/225 (59.11%), Query Frame = 1 
Query:    1 QGCTRLRIDFDTSAGDEMYTKLKSSLEMAKHFTALLAEALIVDKEGEEPKGATMTLYFPDMGSAALAKHQWQSGNDTAQYQVPEGVRFASVTSDSPLETDVGCIVLCPRNSEAEGTLKLVEKISHGNTF-MVLVNPELINMGTTGYGLAGRRVRDEILSIFQTCYYLRTLPWGAVTMEYGKKYSVWQDEPKNPTGYRLLKSVRQRPLGEVLDDIYLESNSDDEPG 672
            +G T +RIDFDTS GD  YTKLK+SLE  ++  A LA  ++      +     + L+FPD G+AALA  QW+ G  T +  +   V   S   D P + D   +V+CPR SEA     L++ ++       VL+NPEL++MGTTGYG AGRR++  +L      Y L+TLPWGA+ + Y   YSV+Q++   P GY+LL +    P GE L++IY E N +D+ G
Sbjct:   73 RGKTLIRIDFDTSNGDATYTKLKNSLEFTRYVAANLATRMLAQDTNSQ-----LCLFFPDAGAAALAAQQWKLG--TPEAMLGANVNLKSFPRDKPSKEDSNFLVICPRASEASAVEILIDDVARTQQKPTVLINPELVDMGTTGYGFAGRRLKQRLLDELTQAYLLKTLPWGALALTYPNLYSVYQEDANAPDGYKLLTTRPTLPNGEELEEIYAEYNKNDDDG 290
[Close]
BLAST of mRNA_C-tenellus_contig797.3.2 vs. uniprot
Match: A0A4D9D446_9STRA (DUF1995 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D446_9STRA)

HSP 1 Score: 164 bits (416), Expect = 7.560e-41
Identity = 93/251 (37.05%), Postives = 143/251 (56.97%), Query Frame = 1 
Query:    4 GCTRLRIDFDTSAGDEMYTKLKSSLEMAKHFTALLA------EALIVDKEGEEP--KGATMTLYFPDMGSAALAKHQWQSGNDTAQYQVPEGVRFASVTSDS-PLETDVGCIVLCPRNSEAEGTLKLVEKISHGNTFMVLVNPELINMGTTGYGLAGRRVRDEILSIFQTCYYLRTLPWGAVTMEYGKKYSVWQDEPKNPTGYRLLKSVRQRPLGEVLDDIYLESNSDDEPGATPKFLDSVAGFVRDFGRL 729
            G  R+RIDFDT+AGD  YT LK+S+ +A      L       E ++ D EG++   +G  + + FPD GSA   +  W++G   +  +VP  VR A+  ++      D   +++CPR SEA  T +L+  +   +  +VL+NPELIN    G+G+AGRR+RDE+ + F+  YYL+TL WGA+T  +   YS+W ++     GYRLLK+V + P  + ++DI     +D E G     L  +A F+  F R+
Sbjct:  120 GRNRVRIDFDTTAGDLTYTTLKNSIPLALALAQYLGQEVMEEEKVVTDAEGKKAGYEGKQLVVVFPDTGSAVWVEQDWRAGKLGSSAKVPPSVRCAAFPNEMVDSARDSAFLIVCPRASEAPATYELLTSLP-ADAKVVLLNPELINAEVVGFGMAGRRIRDEVENKFERAYYLKTLSWGALTRRWPGGYSIWMEDEGEEEGYRLLKTVGRFPSLDEMEDI--RDAADMEGGENRGVLSGLARFIDSFKRM 367
[Close]
BLAST of mRNA_C-tenellus_contig797.3.2 vs. uniprot
Match: A0A7S2FCL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FCL6_9STRA)

HSP 1 Score: 157 bits (398), Expect = 4.740e-39
Identity = 96/231 (41.56%), Postives = 125/231 (54.11%), Query Frame = 1 
Query:    4 GCTRLRIDFDTSAGDEMYTKLKSSLEMAKHFTALLAEALIVDKEGE---------------EPKGATMT--LYFPDMGSAALAKHQWQSGNDTAQYQVPEGVRFASVTSDSPLETDVGCIVLCPRNSEAEGTLKLVEKISHGNTFMVLVNPELINMGTTGYGLAGRRVRDEILSIFQTCYYLRTLPWGAVTMEYGKKYSVWQDEPKNPTGYRLLKSVRQRPLGEV-LDDIY 642
            G   LRIDFDTSAGD  YTKLKSS+ MA+ FT  + + L +D++ E               E  G T T  LYFPD GS ALA   W  G   A   VP  V+  S++SD P  TD   I +CP+ SE E    ++          V +NPEL++MG TG+G AGRR+R E++      YYL+TL WGAVTM Y   Y+V+Q + ++           +RP+ E  L DIY
Sbjct:   69 GWNLLRIDFDTSAGDMTYTKLKSSIPMAQKFTIQMCQLLSLDEKSESSNDLENISGDPAEEEATGETKTARLYFPDAGSTALALRDWMVGTPAAL--VPSCVKLCSLSSDRPAATDQIIIFVCPKASEVEAVKMVMRDAEEMVIPTVFINPELVDMGVTGFGAAGRRLRQELIDRMVNTYYLKTLQWGAVTMAYPGGYTVYQTD-ESAXXXXXXXXXTERPVNEEQLMDIY 296
[Close]
BLAST of mRNA_C-tenellus_contig797.3.2 vs. uniprot
Match: A0A7S2WGZ0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGZ0_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.200e-38
Identity = 86/242 (35.54%), Postives = 139/242 (57.44%), Query Frame = 1 
Query:   13 RLRIDFDTSAGDEMYTKLKSSLEMAKHFTALLAEALIVDKEGEEPKGATMTLYFPDMGSAALAKHQWQSGNDTAQYQVPEGVRFASVTSDSPLETDVGCIVLCPRNSEAEGTLKLVEKISHGNTFMVLVNPELINMGTTGYGLAGRRVRDEILSIFQTCYYLRTLPWGAVTMEYGKKYSVWQDEPKNPTGYRLLKSVRQRPLGEVLDDIYL---ESNSDDEPGATPKFLDSVAGFVRDFGRL 729
            R+R+DFDTS GD  YT LK+++ +A+ F A +A  L+   + E P    + +YFPD GSAALA+  W+ G+  A+  VPE V+ +S++ + P E D   + +CPR SE +    +V  +      ++ +NPEL++MG TG+G  GR +R+ +++   T + L+T PWGA+   Y K +S +  +P   +GY+L+++ +Q    E LD +     E +S D       F +SV  F +   RL
Sbjct:  102 RIRVDFDTSGGDATYTVLKNTMPLAQGFLAKVAPRLV---DAENP--GAVRVYFPDAGSAALAQRDWKIGS--AEAVVPECVQLSSLSRELPEERDQAIVFMCPRASEVDALRAVVSAVEDKGIPLIFLNPELVDMGVTGFGAVGRMLRETLINTMVTSFCLKTTPWGAIARAYPKDFSTYVVDPDEDSGYKLMQTSQQPLDAEELDALLQGSSEGSSSDSSNGGGLF-NSVGKFFQGLSRL 335
[Close]
BLAST of mRNA_C-tenellus_contig797.3.2 vs. uniprot
Match: A0A1Z5JNI5_FISSO (DUF1995 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNI5_FISSO)

HSP 1 Score: 155 bits (391), Expect = 1.360e-37
Identity = 95/291 (32.65%), Postives = 146/291 (50.17%), Query Frame = 1 
Query:   13 RLRIDFDTSAGDEMYTKLKSSLEMAKHFTALLAEALI-----------------------------VDKEGEEP----------------KGATMTLYFPDMGSAALAKHQWQ-SGNDTAQYQVPEGVRFAS---VTSDSPLETDVGCIVLCPRNSEAEGTLKLVEKISHGNTFM---VLVNPELINMGTTGYGLAGRRVRDEILSIFQTCYYLRTLPWGAVTMEYGKKYSVWQDEPKNPTGYRLLKSVRQRPLGEVLDDIYLESNSDDEPGATPKFLDSVAGFVRDFGRL 729
            R R+DFDTS GDE YT LKSS E  +++ + L  ++I                              + E EE                 +G    +YFPD G+AALA+  W  SG      +VP  V F+S   V   + +  D+     CP+ SE++   K++++    ++ +   V VNP L++MG TG+G+AGR +R+ ++   QT YYLRTL WGA+T +Y + +SVWQ++     GYRL+K++ + P    ++DIY   N      ++  FLD +  FV+   RL
Sbjct:   70 RCRVDFDTSVGDETYTMLKSSTEFMQNYVSALCYSMIPGLQEQRQAEMMRVVEARAELKAMENAEEANAEREEQLVQIIAANGRDKNAKWEGPKARIYFPDEGNAALARRDWLGSGPKPGAAKVPPCVEFSSCGGVQRVNDVSNDMLVFFFCPKASESDSVEKILQRSEAESSCLKLTVFVNPSLVDMGVTGFGMAGRMLRERLIDPLQTTYYLRTLAWGALTRQYPEAFSVWQEDEGADGGYRLIKTMDRLPSNPEVEDIYDIENGAKSERSSGGFLDQLGDFVQGMTRL 360
[Close]
BLAST of mRNA_C-tenellus_contig797.3.2 vs. uniprot
Match: A0A7S2EEN6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EEN6_9STRA)

HSP 1 Score: 155 bits (391), Expect = 3.200e-37
Identity = 100/300 (33.33%), Postives = 142/300 (47.33%), Query Frame = 1 
Query:    4 GCTRLRIDFDTSAGDEMYTKLKSSLEMAKHFTALLAEALIV-------------------------DKEGE------------------EPK------GATMTLYFPDMGSAALAKHQWQSGNDTAQYQVPEGVRFASV--TSDSPLETDVGCIVLCPRNSEAEGTLKLV----EKISHGNTFMVLVNPELINMGTTGYGLAGRRVRDEILSIFQTCYYLRTLPWGAVTMEYGKKYSVWQDEPKNPTGYRLLKSVRQRPLGEVLDDIYLESN---SDDEPGATPKFLDSVAGFVRDFGRL 729
            G TR R+DFDTS GDE YT LKSS E  + + + L  ALI                          DKEGE                  +PK      G    +YFPD GSAALA+  W       +  VP  V F+S        +  D   +  CP+ SEAE   +++     K        V VNP L++MG TG+G+AGR +R+ ++    + YYLRTL WGA+T  +  +++VWQ++ +   GYR++KS+ + P    ++DIY   N   +D   G    FLD++  FV    +L
Sbjct:  100 GMTRCRVDFDTSVGDETYTTLKSSTEFMQKYVSALCYALIPGAMERRQDEMMRLATAQAQLTAMMQDKEGEVDEEKRQELLDIIAEGGRDPKADNTWKGPVARIYFPDEGSAALARRDWNPKGPPTEALVPPCVEFSSCGGVQMQDITNDKIILFFCPKASEAEFVEQILYKTEAKCGENLALTVFVNPLLVDMGVTGFGMAGRMLRERLIDDLTSIYYLRTLQWGALTRIWPNQFTVWQEDEEEEGGYRMIKSLDRLPSNPEVEDIYDYENGLANDPAAGGGLGFLDALGDFVNGMTKL 399
[Close]
BLAST of mRNA_C-tenellus_contig797.3.2 vs. uniprot
Match: A0A8J2SYR0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYR0_9STRA)

HSP 1 Score: 151 bits (382), Expect = 6.810e-37
Identity = 88/252 (34.92%), Postives = 133/252 (52.78%), Query Frame = 1 
Query:    4 GCTRLRIDFDTSAGDEMYTKLKSSLEMAKHFTALLAEALIVDKEGEEPKGATMTLYFPDMGSAALAKHQWQSGNDTAQYQVPEGVRFASVTSDSPLETDVGCIVLCPRNSEAEGTLKLVEKISHGNTFMVLVNPELINMGTTGYGLAGRRVRDEILSIFQTCYYLRTLPWGAVTMEYGKKYSVWQD---EPKNPTGYRLLKSVRQRPLGEVLDDIYLE---SNS----DDEPGATPKFLDSVAGFVRDFGRL 729
            G  +LR+DFDTS GDE YTKLK S E A+      A ++  D+         + L+FPD G+AALA+ +W+  +D  + +VP  VR  +   D     D     LCPR  E +   +LV         + L+NP L++MGTTGYG+AGR  ++  +   + CYYLRTL WGA+   Y + YSVW+    +     GY  +K+   +P  E+L++++ E   +N+    D+  G      D +  F+  F +L
Sbjct:   70 GSLKLRLDFDTSMGDETYTKLKLSTEFARDVAIEWALSMEEDEN--------LVLFFPDAGAAALARQEWKM-DDLDEAEVPPNVRVKAFPRDRLDADDRAVFALCPRAPERDACEELVNTCEETLRPVALLNPYLVDMGTTGYGMAGRLFKERFVDALEPCYYLRTLEWGALARTYPRPYSVWRQCGLDEDVEGGYAFVKNYFSQPNDEMLEELFDEVYGTNTGGPMDEADGGGGNLFDGIGKFIDAFQKL 312
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig797.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR77_ECTSI1.240e-10266.80DUF1995 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KFG6_9PHAE2.400e-10166.80DUF1995 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YKF2_9STRA9.340e-7050.41DUF1995 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S3NLL6_9STRA3.570e-4641.78Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A4D9D446_9STRA7.560e-4137.05DUF1995 domain-containing protein n=1 Tax=Nannochl... [more]
A0A7S2FCL6_9STRA4.740e-3941.56Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2WGZ0_9STRA1.200e-3835.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5JNI5_FISSO1.360e-3732.65DUF1995 domain-containing protein n=2 Tax=Fistulif... [more]
A0A7S2EEN6_9STRA3.200e-3733.33Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8J2SYR0_9STRA6.810e-3734.92Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig797contigC-tenellus_contig797:7169..13758 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LR77
PFAMsDUF1995
Model size2730
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.38e-101
EggNOG OGs28J60@1|root,2QRI3@2759|Eukaryota
Ec32 ortholog descriptionDomain of unknown function DUF1995
Ec32 orthologEc-06_004070.1
DescriptionDomain of unknown function (DUF1995)
Cds size681
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig797.3.2prot_C-tenellus_contig797.3.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig797 9299..13707 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790072.6801038-UTR-C-tenellus_contig797:7168..90691680790072.6801038-UTR-C-tenellus_contig797:7168..9069Choristocarpus tenellus KU2346UTRC-tenellus_contig797 7169..9069 -
1680790072.6912305-UTR-C-tenellus_contig797:9201..92981680790072.6912305-UTR-C-tenellus_contig797:9201..9298Choristocarpus tenellus KU2346UTRC-tenellus_contig797 9202..9298 -
1680790072.7752953-UTR-C-tenellus_contig797:13707..137581680790072.7752953-UTR-C-tenellus_contig797:13707..13758Choristocarpus tenellus KU2346UTRC-tenellus_contig797 13708..13758 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790072.7098527-CDS-C-tenellus_contig797:9298..95031680790072.7098527-CDS-C-tenellus_contig797:9298..9503Choristocarpus tenellus KU2346CDSC-tenellus_contig797 9299..9503 -
1680790072.727929-CDS-C-tenellus_contig797:10890..110511680790072.727929-CDS-C-tenellus_contig797:10890..11051Choristocarpus tenellus KU2346CDSC-tenellus_contig797 10891..11051 -
1680790072.7372992-CDS-C-tenellus_contig797:11920..120431680790072.7372992-CDS-C-tenellus_contig797:11920..12043Choristocarpus tenellus KU2346CDSC-tenellus_contig797 11921..12043 -
1680790072.7507951-CDS-C-tenellus_contig797:13312..134041680790072.7507951-CDS-C-tenellus_contig797:13312..13404Choristocarpus tenellus KU2346CDSC-tenellus_contig797 13313..13404 -
1680790072.764892-CDS-C-tenellus_contig797:13607..137071680790072.764892-CDS-C-tenellus_contig797:13607..13707Choristocarpus tenellus KU2346CDSC-tenellus_contig797 13608..13707 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig797.3.2

>prot_C-tenellus_contig797.3.2 ID=prot_C-tenellus_contig797.3.2|Name=mRNA_C-tenellus_contig797.3.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=227bp
MYTKLKSSLEMAKHFTALLAEALIVDKEGEEPKGATMTLYFPDMGSAALA
KHQWQSGNDTAQYQVPEGVRFASVTSDSPLETDVGCIVLCPRNSEAEGTL
KLVEKISHGNTFMVLVNPELINMGTTGYGLAGRRVRDEILSIFQTCYYLR
TLPWGAVTMEYGKKYSVWQDEPKNPTGYRLLKSVRQRPLGEVLDDIYLES
NSDDEPGATPKFLDSVAGFVRDFGRL*
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mRNA from alignment at C-tenellus_contig797:7169..13758-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig797.3.2 ID=mRNA_C-tenellus_contig797.3.2|Name=mRNA_C-tenellus_contig797.3.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=6590bp|location=Sequence derived from alignment at C-tenellus_contig797:7169..13758- (Choristocarpus tenellus KU2346)
CAGGGCTGCACTCGTTTGCGCATCGACTTCGACACGTCTGCAGGGGATGA
GATGTACACGAAACTTAAGTCGAGTCTCGAAATGGCCAAACACTTCACTG
CTCTCCTGGCAGAGGCCCTCATAGTCGACAAGGAAGGAGAGGAGCCAAAG
GGTGAGGCTCACTGCACGCACATACGTCGAGCTGTTGAAGGCTTCAGCAT
AGTGTTCACCTCTCACTTTTTGACCTACTCTTAAAGTCATAAGAGATTTG
CACCGCCACTCGCAATTCTGCACCAAACACCTCATACGCCCCAGACCACG
TTTCACACCACATGGCCTCCCTTCTCCAAACCCATACACCCTTTTTGTCA
CCAGGAGCTACCATGACGCTATATTTTCCTGACATGGGATCGGCTGCCCT
TGCGAAGCACCAATGGCAGTCAGGAAATGACACAGCTCAATACCAGGTAA
GGAGCTTCTTTTCCTTCCCCAAGCTGCTCTTGTGCGAACAAATGTTTCTG
CAGGTCGGTCACCCATAGGTTGAAGATTTGTTGGTACATTACTGATGCAT
CCCATACCATTTGAAAACTCTTCAAATTGGCCGCGATGGTGCAGTTGGTT
GGGTAGCTGTGCAGGCCCTTCTCTAAATGGCGTATTTTGATTTAATGGTG
GAGTCATGTCACATGCACTGTCAAAGTACCCACATGTGCCAACAGCCTTG
TGCAGACCCCAAGCTCCTGTTTGCAGCAAAAACAACCTGTAGGAATACAT
CAACAGTGCTAACAGGTCAAGAGGTGTGCTTTCCCTCTGCAAGGACTTAC
TTTGTGCTTTCACGGCTCGTCTCAATGAGTTTATGAGCATTTGACTTTGT
CGAGGTTCCAGTGAAATATACAATATCGTCCACCTCAGTCATACCTATCT
AAATCCATTCTGCAATTCTCCAGCGAGAGGAGTTCAATACCCTATCCCTA
ACTCTAATCCTAATGACAGCACTATACTACGTAGTACATATTGTTTATAT
ATTGTTTGTATTGTACGGTATTCACAACCCTACCACTTCAAGAGTGCTCT
TGCAATTTGCTGTAAGGTATGTTTATCAGCGAAGTATGTCTGCACCAGGC
AGACCTGTACTGCGCAGTGCTTGGCCTAGTCTTGTCACCTTCTGTGTGTA
CATTGCTGAATAGGTTAGAATAGATTGGACCAGAGTCCTCACTAATGTGT
ACATGCAATTATTGCTTACAGCAAGGCTTGGACAAAAAGCTCTTGTGTAT
GCCTAGCTGGCAGTTGTGCTCTGTGGGCATATTTGTGGGGAAGTGGGACG
TGCCAAACATCTTCCTGCTTCGATGGCGAGGACCGAAAAGGTTCTGGATG
CTTTGTCTTTCTGATTATTGCGAAGGTCTTACTTTGAAATGTCAAAAATA
CGCCTTTTAAGGATATCAAGAACTGTTTTTGTAGTACTTGCTCTGATCAC
ACTATATATTTTCAATTCCGACTGCTGTGAACCAACTCCCAGCAATTATT
GAGGAGTGGTGCACAGAGGTGGTACGCATAACTGAAATAGACAAAAAAAA
AAGCAATATGTAAAGAAAATAGGCCAAGTCACAGGAATACTTTTGTTTCG
CACATCCCTTCCCTCGTGCACCCCAAAACCTTGGTACTTGGTCTTGTTGT
ATTCTCAAACGACCCCTGCGAACTCTGTAGTGCTATTAATACTCTGTGCA
TGGTCTTTTTGTAAGGTGCCAGAAGGCGTGAGGTTTGCGTCAGTGACGAG
CGACTCGCCCTTAGAAACAGATGTTGGGTGCATTGTGCTCTGTCCACGGA
ACTCGGAGGCAGAGGGCACCCTCAAATTGGTGGAAAAGGTATGAGCATGA
TGTTGAGTGCAATGGTGTTGTGGAGATAGAAGGTGGGGGGGATGGGTCAA
TGACTAGATGAAGGACTTGTCAAGGTCTTCAGCTTTGGAAGGCTATCACT
GGGGTTGAGGATTCCTCTATCAACCTTCATGTAGGTGGATAAGTATGTTC
TGTTAATACTTCCGTTGGTAATGCATTGGGTGTGGATTTTGTTGCTTGTG
GGGAGGCGTGCTCATCACCAATGGTAGAACTTGGGGTTATTTGTTGTGGT
ATATATATGTTCTACTGTGTGTGTGTGTTAGCTTGATTTGAGCATTGTTG
TAGGGGTTGTTACTGAGTTTTACTATGATGAGAGGGTTCTGCTTGTCTTC
ACATGGCAAGAGCCTTCTCTCCCACCGCCCAAAGAGGCTTGTCAACTTGC
TACAGGATTTTTCACGGGCGTCAGCATGTATGTGCATGGCATGGTTGAGA
AATCACGGGTGGTACTAGCCTGATAATGAGAGGAAATTTTATTTTTGTTA
TTTTTGTTGTGGTTTTGGGAGGTGGGAGGATAACTGAGCGTCTTGTGTTG
GAACACCCAGCTTAGAAGAGGGTGTAGAAATAGGAGAAGATAACAAGCTT
TGGAGCATTCATACTGCCTCCTGCGGAGCAATCGAGAGGTATACCTTTGT
CACGTCCCGTGACACAACAGCCCCCATTTTAACATTTCGTTTGCGGTTGC
CCCTTGACCACCCTGCTGGCAATACAGTTTACCTACTTGATCAGGGCCCT
GCACCATATCCGGAGTAAAAGTCTTCGCAAATGCCCCCCCCCCCCTGCCC
CCGGCCACTCTCGCCCACCGCCCATGCCCTGACCCGGCTGTACTTTTCCC
CTCCAAGATTTCGCATGGGAATACTTTCATGGTGCTAGTGAACCCAGAGC
TGATCAACATGGGAACAACAGGGTACGGCTTGGCGGGAAGACGTGTCCGG
GACGAAATCCTTTCTATTTTTCAGACCTGCTACTACCTGCGCACGCTTCC
GTGGGGGGCTGTAACCATGTGAGTTTTTTTTTTAGTGCGGAATTTTTTTT
TTGGTGGCGAGCTCTGCTTGCGATGAAGAAATTTCTGGGAACAAGAAAAA
AATAAGGTATGAGTTGTTACCCTTCGTAGTGGACTTCTTTTTTTTTAGTC
GGGGTGTCATTTTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATGTGGA
GTGAAACCTCCCTTAACAGTAGTAACAGTAGTGTGTTCCAATAGCCTGGA
AGATCGGATGTGTCGTCACATGCAGTTAACTGTGTGTCTGTGGTTGTTTG
AGGCCACGTTCACAAGTCTAACCCTAACCCTAAACCCAAGTCAGGTGGAG
CTCCCATGATACTGGATGCGTAATGTATTGCCCTCTTGTGTTCGGAAGCA
GTTGATGCTGCGAGGGTCCACCTTCAGTAGCGTTGCCTTTGTAGCTCTTG
AAAATGGCGAAGTTGAGCCTGTTCCCAGTGGTTGAATTTTATGACCCATT
TCCTCCTTGTAGCTTAATTAAATTAAATGGTCTGTATCAATCTTGTCGTA
TCCATCCATTTCCACACTGGAGGTGGATGAATTGACTGGTTTTGTCTCCT
TGTGTTCCCATTACGCCTTGTCAACAATCAAAACCGGCTGCTCGATTGTA
CCAATGGTTGTTTCTGTGTTTTTATATCGGTACATGCCTGTGCAGTATGG
TCCATACCCCCGTGCTGTCAAGTTTTATTTGGATTTGGTGGGGGGGGGGG
CAGCTGTGTACCTAGTCTCTTTTTCTCACGATATTCTGTAGTTGGTTTTC
CACCAATCCACACTGCTCATTACTACAGTGTGGCTTTCAAGGTATATGCT
TCAAGTATGACTATATTTGGTCAAGCGCCATGGAAGGTTGGCTTAGGTAC
TGATTGTTAAACCTGAAGTTTACCCACTTTAGAGAGGACCAAGCAGGAGA
CTAAGAAGAAGAAGTGACTGAGCCCTTCTCCCTTCATGATTGTGTACTTT
TGACCTGCTCATTGGGTTAGGGTTAGGGTTAGGGTTACTGATTTTTCTGG
GTGTTGTAGAGATCAAGGGGGGGTAAAAGGATATTGGACGATAAAATGCA
TGTATCCTACGGACTGAAGCATTACTATGACTTAGGTTTAGGTTAGGGTG
GGGGTTGGGTACCTGAACTAATGCGTGGTACTGTTTGTATTATGGTCCTG
TCTACTGTACTCTATGCTGAGATGAATCATCAGAACCACACATTGTACAC
CCTACATGCCAGCGGAGTAAGACCAGTACTGGACTGGACTTGATTCTCAC
TACCCCCACGCACCTTGCGCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCG
CCCCACGCACACCGACACACCACCGGANNNNNNNNNNCCCCCCCTTCCAA
CACAGGGAGTACGGGAAAAAGTACTCTGTTTGGCAAGATGAACCGAAAAA
CCCAACAGGCTACCGCCTCCTCAAGTCTGTGAGACAGAGACCTCTTGGAG
AGGTTCTTGATGACATATACCTTGAGAGCAATAGCGATGATGAACCCGGT
GCAACCCCAAAGTTCCTCGACAGTGTTGCAGGCTTTGTGAGGGACTTTGG
CAGACTGTAGTGGTTCAATAGAGGAGATGACCAAGAACATGAACTGTATC
CACCTTACCCTGGACAATTTGGCACCATCGGTCGCCTAGGGGGGAGGGGG
GGGGGGGGAATTTTTGTGCGGGAATGAAACTGAGATGGGAAGGGGGGGGG
GGGGGNNNNNNNNNNAAAAAAATCAACGTTCCCCCCCTCCCCCTGGACAT
TTGGGCACGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAATCTTTGTGC
GAGAATGAAACTGGGGAGGTGAGGAAAGAGGAGTTTCTCTCTTCTTTCTT
TACAGGCTGGTTGAAAAGCTTGCTTTGTTTTGATGGTGTAAGTGATGCTT
ATATCCCAGGTTGATTGGTTGGGTTGGTTTGAAGCGAATACTGAGAGCCC
TGCCACCTGAGCAAAGTTTTTTTTTATTGAAATTTCCTGAGTGCGTTGTT
GAGGAATAGATGTGTTACTCAGATTGGGAGTGAAGGATTTTGTGAATAAA
GAAACGGCTACCGCGAGGGCTTCCCCTTCATTTTTTTTTATAATTTGCCT
GTTCGCAAACGGTGCTCTTGTTTTGTTTTTTTTAATCATTGTAATGATGT
CACATATCAAGATCTGTGTGTGTCACATGCTCTTTTGCCCCGAAGGTATT
TGTACTGTGGTTTGAAGGAACATGTGTTAATCGAGATGTCTTGTCTGGAG
ACCTGTACTGTGTAGGGTTTTTACATTGTTTTTCATCTCTCATTATAGTG
GCAATCAAGGAAGAAAAAATGATACGCTATGTTGTATAGTTACCTGGTAC
AATTAACGTATTTTTTTTACTGAGTTACGTATTAACAGTATAAATCCAGT
TTTTTAATGCAGTGTACAGACTAGTACATACAGCTCTCTTCTCCGCCAAC
AGGAGATAGAATACCCCCAAGGTTTATGAAAGATGGGTCAGATTGAAGGG
AGAGGAGAGGTTGCAGGGATGATAGGATTGTAGCAGCTTCTGTGTTTGGT
AGTACAAGCTTTTTCGTTCCAGTGTTGATATTTTTTATTTCCGTTCCATG
CCTTGTATGTGAAGTATGCTGGGCCCTCGCCATTGGTCTTGGCATGGCTT
ACTCCTGCAAACCACGATGGTCTTGCTGGCGCAATTTTATTTATATTGGC
AGTTTTATCAGTACTTGAAACCAAAATTTTGGTTAGGGATAGGGTTAGGG
ATAGGGATAGGGATATATATTTTGTGTATATTTTCTTGGCATCATCAAAA
GAATTGCAAAGGGCTCCCCGCCAATAGCAAACCTAATGGGGCCCATCAAG
GAGGTCCAAGTTTGCTTGAGGAAGACACTTCTGTGAACTCCCCCCTCATC
ATCCCCCACATACATCTCTGTGACTTAGGCATTGACCTCAAGCAACAAAG
ATACTATCTACAGTACTACCCTTTCCTGACCTTGACTGTGATGATGAGGA
ACTATGTGATTGGGCAAAGATGTCTGTGTGACTCTGCACAAGAGGTATGA
TTGAGGGGTTTTCCAAACCGCTTTGGCGATGGGTCAAATAGTATGTACTG
GTGTGAGGGTCCACGTGGGTAGCCTCCAATAAGGTCCATAGGGTGTAAGT
AGGTGGTGATTGCCTGTGTGAACCCCAGGACCAAGCTCCTTTGTGGCATT
CCACAGTTTGGAGGCGTGTAGAGTTGTAAGTGGTTGATATCTTGGAGGTT
GAGTAATCGAGGGAGGACATGCTAGAGACGGCTGTTACGATATGACACAG
TGCACACACTGCCCTTGCTAAGGGGTTATAGTCCCATACAATGAAGAGGC
TAAGGGAATTATATAGAGCTTCTCTCTTGAATATTGTGGTGGGTTTTGGC
GCTGCTGTTAGTGGAGGGGTGATGTGTGTCATGAGGAGGGAGCAGTATAC
AGGGCAGTCAGTTCAAGTGGAAGTTGAGTCCTTCCAGAACAGTAATGAGG
AGAGGAGAGTTTAGATAAATGTCCCGCTTAGGTAGTGGTGAGGGAAGGAT
TCATCTTTTTCGCACTTATTTAGCTTTGTAGACAAGCTGGCACATAGTGT
TTTGGTCATCCCTGCTTCAGAGGCAGTAGTTGGACTGTTACGTCTGCTGT
TCATGTTACTTGGGAATTTTTTATAGGGAATAGAAATGGG
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Coding sequence (CDS) from alignment at C-tenellus_contig797:7169..13758-

>mRNA_C-tenellus_contig797.3.2 ID=mRNA_C-tenellus_contig797.3.2|Name=mRNA_C-tenellus_contig797.3.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=681bp|location=Sequence derived from alignment at C-tenellus_contig797:7169..13758- (Choristocarpus tenellus KU2346)
ATGTACACGAAACTTAAGTCGAGTCTCGAAATGGCCAAACACTTCACTGC
TCTCCTGGCAGAGGCCCTCATAGTCGACAAGGAAGGAGAGGAGCCAAAGG
GAGCTACCATGACGCTATATTTTCCTGACATGGGATCGGCTGCCCTTGCG
AAGCACCAATGGCAGTCAGGAAATGACACAGCTCAATACCAGGTGCCAGA
AGGCGTGAGGTTTGCGTCAGTGACGAGCGACTCGCCCTTAGAAACAGATG
TTGGGTGCATTGTGCTCTGTCCACGGAACTCGGAGGCAGAGGGCACCCTC
AAATTGGTGGAAAAGATTTCGCATGGGAATACTTTCATGGTGCTAGTGAA
CCCAGAGCTGATCAACATGGGAACAACAGGGTACGGCTTGGCGGGAAGAC
GTGTCCGGGACGAAATCCTTTCTATTTTTCAGACCTGCTACTACCTGCGC
ACGCTTCCGTGGGGGGCTGTAACCATGGAGTACGGGAAAAAGTACTCTGT
TTGGCAAGATGAACCGAAAAACCCAACAGGCTACCGCCTCCTCAAGTCTG
TGAGACAGAGACCTCTTGGAGAGGTTCTTGATGACATATACCTTGAGAGC
AATAGCGATGATGAACCCGGTGCAACCCCAAAGTTCCTCGACAGTGTTGC
AGGCTTTGTGAGGGACTTTGGCAGACTGTAG
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