mRNA_C-tenellus_contig7721.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7721.1.1 vs. uniprot
Match: D7FL06_ECTSI (TLDc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL06_ECTSI) HSP 1 Score: 292 bits (748), Expect = 3.630e-91 Identity = 142/218 (65.14%), Postives = 172/218 (78.90%), Query Frame = 1 Query: 1 GTDVSESLYEWAMHYRGVALLGGLALLLSTGKFISYYWDRIPLLRRTVIPPAAIAGLLGCAIYRVFSGLLEASGVKSLVDEGLSEVVVNLINFTFVAFMLGFASMGTYVPRTRVVLHTIWHEAMPMLIYSQVLIWGQSCMALGVVGLFRLGNPEVSPYLGALVTLGLETGRDVTAFSSARIVGEWAHEAVQLADSIGLLLSILAGVVLVTLHKQGQWG 654 G D E+L WA+ YRGVA G LA+LL TGKF+ ++W R+ LRR V+PPA I+GLLGC +YR+F G++ GVKS +DE LSEVVV +INFTF A LGFAS GTYVPRTR VL +IWHEA+PML+YSQVLIWGQSC+AL VGL RLGNP+VS +LGALVT+GLETGRDV +FS+ I GEWA E V+LADS+GLLLS+ G+ L+T+H G WG Sbjct: 5 GADDDETLGAWALRYRGVATFGALAVLLGTGKFVGFHWHRLAFLRRFVVPPAVISGLLGCVVYRLFKGVMSP-GVKSSLDESLSEVVVLMINFTFSALTLGFASAGTYVPRTRAVLASIWHEALPMLVYSQVLIWGQSCVALLTVGLIRLGNPDVSVFLGALVTMGLETGRDVMSFSTREIAGEWADEVVRLADSLGLLLSVFGGICLMTMH-MGSWG 220
BLAST of mRNA_C-tenellus_contig7721.1.1 vs. uniprot
Match: A0A835ZFP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFP8_9STRA) HSP 1 Score: 179 bits (454), Expect = 2.050e-51 Identity = 95/205 (46.34%), Postives = 131/205 (63.90%), Query Frame = 1 Query: 28 EWAMHYRGVALLGGLALLLSTGKFISYYWDRIPLLRRTVIPPAAIAGLLGCAIYRVFSGLLEASGVKSLVDEGLSEVVVNLINFTFVAFMLGFASMGTYVPRTRVVLHTIWHEAMPMLIYSQVLIWGQSCMALGVVGLFRLGNPEVSPYLGALVTLGLETGRDVTAFSSARIVGEWAHEAVQLADSIGLLLSILAGVVLVTLHKQ 642 +WA Y GVALLG L++LL+ GK I+++ +PLLRR +PPA +AGLLGC ++ G + +++ V+E + +VVVNLIN F LGF + TYVP TR +L IWHEA+PML+YSQVL+WGQSC+AL V LF NP V+PYLGAL G G AH+ V+ AD++GL++S+ A V ++T + Sbjct: 2 QWAGRYSGVALLGVLSVLLAAGKGINHHMGHVPLLRRLTVPPAVVAGLLGCFLFHTI-GKQFPTELENSVEERMGDVVVNLINLCFAGLALGFGAAKTYVPHTRAILMGIWHEALPMLLYSQVLLWGQSCVALMVGALFSAHNPAVTPYLGALRKGGGAGG------------AADAHDIVRQADAVGLMVSLAASVAVMTWNSM 193
BLAST of mRNA_C-tenellus_contig7721.1.1 vs. uniprot
Match: A0A4D9DA04_9STRA (TLDc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA04_9STRA) HSP 1 Score: 131 bits (330), Expect = 4.580e-32 Identity = 86/206 (41.75%), Postives = 119/206 (57.77%), Query Frame = 1 Query: 28 EWAMHYRGVALLGGLALLLSTGKFISYYWDRIPLLRRTVIPPAAIAGLLGCAIYRVFSGLLEASGVKSLVDEGLSEVVVNLINFTFVAFMLGFASMGTYVPRT--RVVLHTIWHEAMPMLIYSQVLIWGQSCMALGVVGLFRLGNPEVSPYLGALVTLGLETGRDVTAFSSARIVGEWAHEAVQLADSIGLLLSILAGVVLVTLHK 639 EWA Y +A +G L+ LL GK + + ++ R T P A I+G LG A+Y + + V+ ++ L + VN++NF F A +LGF S GT + + + I+HE MPML+Y+Q LIWG S +AL V G++RL N E+S + G LVTLGLE GRD+ S E A V LADS GL +SI+ GVVLV + Sbjct: 29 EWAARYEMIAAMGYLSALLMVGKAL-HNLGKLAKFRFTP-PSAVISGFLGLALYDMMGAGSKLLQVE--LESTLRSIEVNIVNFVFTALVLGFTS-GTKKNKMTYKRIFGLIFHEGMPMLLYAQALIWGNSVVALLVTGIYRLWNTEISAFEGGLVTLGLEAGRDL--LPSRVKFKEEALAVVHLADSAGLTISIIVGVVLVACRR 227
BLAST of mRNA_C-tenellus_contig7721.1.1 vs. uniprot
Match: W7TMX7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMX7_9STRA) HSP 1 Score: 113 bits (283), Expect = 8.400e-28 Identity = 69/166 (41.57%), Postives = 99/166 (59.64%), Query Frame = 1 Query: 28 EWAMHYRGVALLGGLALLLSTGKFISYYWDRIPLLRRTVIPPAAIAGLLGCAIYRVFSGLLEASGVKSLVDEGLSEVVVNLINFTFVAFMLGFASMGTYVPRT--RVVLHTIWHEAMPMLIYSQVLIWGQSCMALGVVGLFRLGNPEVSPYLGALVTLGLETGRDV 519 EWA Y +A +G L+ LL GK + + ++ R T P A I+G LG A+Y + + V+ ++ L + VN++NF F A +LGF S GT + + + I+HE MPML+Y+Q LIWG S +AL V G++RL N E+S + G LVTLGLE GRD+ Sbjct: 29 EWAARYEMIAAMGYLSALLMVGKAL-HNLGKLAKFRFTP-PSAVISGFLGLALYDMMGAGSKLLQVE--LESTLRSIEVNIVNFVFTALVLGFTS-GTKKNKMTYKRIFGLIFHEGMPMLLYAQALIWGNSVVALLVTGIYRLWNKEISAFEGGLVTLGLEAGRDL 189
BLAST of mRNA_C-tenellus_contig7721.1.1 vs. uniprot
Match: A0A482RZP7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZP7_9ARCH) HSP 1 Score: 82.0 bits (201), Expect = 7.040e-16 Identity = 58/166 (34.94%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 16 ESLYEWAMHYRGVALLGGLALLLSTGKFISYYWDRIPLL-RRTVIPPAAIAGLLGCAIYRVFSGLLEASGVKSLVDE----GLSEVVVNLINFTFVAFMLGFASMGTYVPRT---RVVLHTIWHEAMPMLIYSQVLIWGQSCMALGVVGLFRLGNPEVSPYLGALV 489 E + WA + G ALLG ++ LL GK Y R LL V+PP I+G+LG + L+ V ++ E GL + NL++F F AF LG S ++ T R ++ +I HE MPM+IYSQVL+WGQ+ + V + R+ +V L +++ Sbjct: 4 EDVEAWARSFGGTALLGLISALLLVGKLTHYVCQRRGLLCGLLVVPPVLISGVLGLLL------LVTLDHVDPIMAEDVRVGLESLRRNLVSFVFAAFALGLMSTKSHSLHTSSLRGLVVSILHEGMPMMIYSQVLLWGQTVCCMLVYMVTRIVTGQVGVVLLSII 163
BLAST of mRNA_C-tenellus_contig7721.1.1 vs. uniprot
Match: A0A7S3GR50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GR50_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.920e-7 Identity = 36/98 (36.73%), Postives = 58/98 (59.18%), Query Frame = 1 Query: 337 RVVLHTIWHEAMPMLIYSQVLIWGQS--CMALGVVGLFRLGNPEVSPYLGALVTLGLETGRDVTAFSSARIVGEWAHEAVQLADSIGLLLSILAGVVL 624 R ++ +++HE MPM+IYSQ+L WGQ+ C+ + F G S + A+V LG+E G D+ S+ +W V+ A+S+GLL ++GV+L Sbjct: 20 RGIVTSLFHEGMPMVIYSQLLNWGQTTCCLLFVCISNFIFGMGIPSAF-AAMVPLGIEAGADIVLSSNYNT--DWTSSIVEEAESLGLLAITVSGVLL 114 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7721.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7721.1.1 >prot_C-tenellus_contig7721.1.1 ID=prot_C-tenellus_contig7721.1.1|Name=mRNA_C-tenellus_contig7721.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=218bp GTDVSESLYEWAMHYRGVALLGGLALLLSTGKFISYYWDRIPLLRRTVIPback to top mRNA from alignment at C-tenellus_contig7721:67..3879- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7721.1.1 ID=mRNA_C-tenellus_contig7721.1.1|Name=mRNA_C-tenellus_contig7721.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3813bp|location=Sequence derived from alignment at C-tenellus_contig7721:67..3879- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7721:67..3879- >mRNA_C-tenellus_contig7721.1.1 ID=mRNA_C-tenellus_contig7721.1.1|Name=mRNA_C-tenellus_contig7721.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=654bp|location=Sequence derived from alignment at C-tenellus_contig7721:67..3879- (Choristocarpus tenellus KU2346)back to top |