mRNA_C-tenellus_contig7695.1.3 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7695.1.3
Unique NamemRNA_C-tenellus_contig7695.1.3
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7695.1.3 vs. uniprot
Match: A0A6H5KYY5_9PHAE (FGE-sulfatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY5_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 4.540e-73
Identity = 119/198 (60.10%), Postives = 137/198 (69.19%), Query Frame = 1
Query:  391 MAFIKAGKFRMGTDEPYHLADGEGPSRVVELSDYYIDRYMVTTRDFSEFVSNTSYVTDSEKYGWSFVFHLMLSPSQQRRIHQAVAGAEWWLPVQGASWRYPEGRDGSDALLDGRDNHPATHVSWNDAEAFCKWRGGRLPTEAEWEKAAQGTVVGDENGRDDSLSGGEEYLREPSLYPWGDNLKSPGGEHRANTWQVRF 984
            M  ++ G FR GTD P+ + DGEGP R+  L  +YIDR+MVT   F EFV NTSY TDSEKYGWSFVF  MLS  QQR I QAVAG EWWLPV+GA WR PEG   +D   DGR NHPATHVSWNDA+A+C+WRGGRLP+EAEWE+AAQG  V       +      E  R    YPWGD+L +P G+HRAN WQ  F
Sbjct:  103 MVLVEEGDFRFGTDRPFIIPDGEGPGRLTSLPSFYIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPMLSMRQQREIQQAVAGMEWWLPVEGAYWRRPEGPT-TDVFRDGRGNHPATHVSWNDAKAYCRWRGGRLPSEAEWERAAQGDPV---EAAGEGXXXXXERGRAVPRYPWGDDL-TPEGQHRANIWQGTF 295          
BLAST of mRNA_C-tenellus_contig7695.1.3 vs. uniprot
Match: A0A6U1N9Z0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N9Z0_9STRA)

HSP 1 Score: 219 bits (559), Expect = 3.040e-63
Identity = 111/210 (52.86%), Postives = 138/210 (65.71%), Query Frame = 1
Query:  373 VNGEVDMAFIKAGKFRMGTDEPYHLADGEGPSRVVELSDYYIDRYMVTTRDFSEFVSNTSYVTDSEKYGWSFVFHLMLSPSQQRRIHQAVAGAEWWLPVQGASWRYPEGRDGSDALLDGRDNHPATHVSWNDAEAFCKWRGGRLPTEAEWEKAAQGTVVGDENGRDDSLSGGEEYLREPSLYPWGDNLKS-PGG--EHRANTWQVRF*SK 993
            V+ + +M  I  GKF MGT++P    DGE P+R V LS +Y+D+Y V+   + EF  +T Y +DSEK+GWSFVFHL L+  QQ+ I QAV GAEWWLPV+G+ WR+PEG   +D   DGR+NHP   VSW DA  FCKWRGGRLPTEAEWE AA G  V  E G      G  E   E  L+PWG++L   P G  +HRAN WQ +F +K
Sbjct:   89 VDPKAEMVLIPGGKFYMGTNDPKIPTDGEAPARPVSLSPFYMDKYEVSNAQYREFAESTGYKSDSEKFGWSFVFHLALTEDQQKPITQAVLGAEWWLPVEGSDWRHPEG-PWADVFEDGRENHPVVQVSWTDAAEFCKWRGGRLPTEAEWEYAAGGNRVEFEEG-----GGAPE---EAQLFPWGNDLVGGPQGPDQHRANIWQGKFANK 289          
BLAST of mRNA_C-tenellus_contig7695.1.3 vs. uniprot
Match: A0A7S4DBW2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBW2_HETAK)

HSP 1 Score: 206 bits (524), Expect = 3.110e-58
Identity = 102/202 (50.50%), Postives = 128/202 (63.37%), Query Frame = 1
Query:  385 VDMAFIKAGKFRMGTDEPYHLADGEGPSRVVELSDYYIDRYMVTTRDFSEFVSNTSYVTDSEKYGWSFVFHLMLSPSQQRRIHQAVAGAEWWLPVQGASWRYPEG--RDGSDALLDGRDNHPATHVSWNDAEAFCKWRGGRLPTEAEWEKAAQGTVVGDENGRDDSLSGGEEYLREPSLYPWGDNLKSPGGEHRANTWQVRF 984
             +M FI  G+F MGTD P  + D EGPSR V LS Y++D+Y V+   ++ FV  T Y+TDSEK+GWSFVF  +L+  QQ  I QAVAGAEWWLPV+G+ WR+P G   D  D    G  NHP   VSW D++AFC+WRGGRLPTEAEWE AA+G              G +++    ++YPWG  L  P G HR N WQ +F
Sbjct:   87 AEMVFIPGGEFMMGTDNPVIVTDLEGPSRPVRLSSYWMDKYEVSNDQYAVFVDETGYLTDSEKFGWSFVFDKLLTQEQQDAIPQAVAGAEWWLPVEGSDWRHPAGPWEDVRDPAA-GLGNHPVVQVSWTDSDAFCRWRGGRLPTEAEWEYAARG--------------GSQDW---EAMYPWGRELM-PDGRHRTNIWQGKF 269          
BLAST of mRNA_C-tenellus_contig7695.1.3 vs. uniprot
Match: A0A8C3M3W4_GEOPR (Sulfatase modifying factor 1 n=24 Tax=Passeriformes TaxID=9126 RepID=A0A8C3M3W4_GEOPR)

HSP 1 Score: 202 bits (513), Expect = 1.130e-57
Identity = 101/200 (50.50%), Postives = 126/200 (63.00%), Query Frame = 1
Query:  385 VDMAFIKAGKFRMGTDEPYHLADGEGPSRVVELSDYYIDRYMVTTRDFSEFVSNTSYVTDSEKYGWSFVFHLMLSPSQQRRIHQAVAGAEWWLPVQGASWRYPEGRDGSDALLDGRDNHPATHVSWNDAEAFCKWRGGRLPTEAEWEKAAQGTVVGDENGRDDSLSGGEEYLREPSLYPWGDNLKSPGGEHRANTWQVRF 984
            V M  I AG F MGT EP    DGEGP+R V L  +Y+D+Y V+  DF  FV++T Y+T++EK+G SFVF  MLS + +  IHQAVA A WWLPV+GASWR+PEG D S   +  R +HP  HVSWNDA AFC+W G RLPTEAEWE + +G +                   E  L+PWG+ L+ P G+H AN WQ  F
Sbjct:   13 VQMVLIPAGVFTMGTQEPQIQQDGEGPARRVHLGSFYMDQYEVSNLDFESFVNSTGYITEAEKFGDSFVFEGMLSEAVKADIHQAVAAAPWWLPVKGASWRHPEGPDSS---ISSRMDHPVLHVSWNDALAFCRWAGKRLPTEAEWEYSCRGGL-------------------ENRLFPWGNKLQ-PKGQHYANIWQGEF 189          
BLAST of mRNA_C-tenellus_contig7695.1.3 vs. uniprot
Match: UPI0018D4FD74 (formylglycine-generating enzyme isoform X2 n=1 Tax=Motacilla alba alba TaxID=1094192 RepID=UPI0018D4FD74)

HSP 1 Score: 203 bits (517), Expect = 1.200e-57
Identity = 114/243 (46.91%), Postives = 143/243 (58.85%), Query Frame = 1
Query:  256 ADCGCTAGLESRKAVGGVTGLGQTSGGQPGSFCHLGANGVNGEVDMAFIKAGKFRMGTDEPYHLADGEGPSRVVELSDYYIDRYMVTTRDFSEFVSNTSYVTDSEKYGWSFVFHLMLSPSQQRRIHQAVAGAEWWLPVQGASWRYPEGRDGSDALLDGRDNHPATHVSWNDAEAFCKWRGGRLPTEAEWEKAAQGTVVGDENGRDDSLSGGEEYLREPSLYPWGDNLKSPGGEHRANTWQVRF 984
            A CGC+A   SR A     G G+ +  +  S    G+    G   M  I AG F MGT EP    DGEGP+R V L  +Y+D+Y V+  DF  FV++T YVT++EK+G SFVF  MLS + +  IHQAVA A WWLPV+GASWR+PEG D S   +  R +HP  HVSWNDA AFC+W G RLPTEAEWE + +G +                   E  L+PWG+ L+ P G+H AN WQ  F
Sbjct:   33 AGCGCSA---SRAA-----GDGREAAARRYSAEAAGSGRSGGRGPMVLIPAGVFTMGTREPQIQQDGEGPARRVRLGSFYMDQYEVSNLDFESFVNSTGYVTEAEKFGDSFVFEGMLSEAVKADIHQAVAAAPWWLPVKGASWRHPEGPDSS---ISSRMDHPVLHVSWNDALAFCRWAGKRLPTEAEWEYSCRGGL-------------------ENRLFPWGNKLQ-PKGQHYANVWQGEF 244          
BLAST of mRNA_C-tenellus_contig7695.1.3 vs. uniprot
Match: A0A8C9NUI2_SERCA (Sulfatase modifying factor 1 n=3 Tax=Serinus canaria TaxID=9135 RepID=A0A8C9NUI2_SERCA)

HSP 1 Score: 202 bits (513), Expect = 2.740e-57
Identity = 101/200 (50.50%), Postives = 126/200 (63.00%), Query Frame = 1
Query:  385 VDMAFIKAGKFRMGTDEPYHLADGEGPSRVVELSDYYIDRYMVTTRDFSEFVSNTSYVTDSEKYGWSFVFHLMLSPSQQRRIHQAVAGAEWWLPVQGASWRYPEGRDGSDALLDGRDNHPATHVSWNDAEAFCKWRGGRLPTEAEWEKAAQGTVVGDENGRDDSLSGGEEYLREPSLYPWGDNLKSPGGEHRANTWQVRF 984
            V M  I AG F MGT EP    DGEGP+R V L  +Y+D+Y V+  DF  FV++T Y+T++EK+G SFVF  MLS + +  IHQAVA A WWLPV+GASWR+PEG D S   +  R +HP  HVSWNDA AFC+W G RLPTEAEWE + +G +                   E  L+PWG+ L+ P G+H AN WQ  F
Sbjct:   44 VQMVLIPAGVFTMGTQEPQIQQDGEGPARRVHLGSFYMDQYEVSNLDFESFVNSTGYITEAEKFGDSFVFEGMLSEAVKADIHQAVAAAPWWLPVKGASWRHPEGPDSS---ISSRMDHPVLHVSWNDALAFCRWAGKRLPTEAEWEYSCRGGL-------------------ENRLFPWGNKLQ-PKGQHYANIWQGEF 220          
BLAST of mRNA_C-tenellus_contig7695.1.3 vs. uniprot
Match: UPI000C6C8EE0 (sulfatase-modifying factor 1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6C8EE0)

HSP 1 Score: 202 bits (514), Expect = 2.800e-57
Identity = 111/246 (45.12%), Postives = 148/246 (60.16%), Query Frame = 1
Query:  250 DNADCGCTAGLESRKA-VGGVTGLGQTSGGQPGSFCHLGANGVNGEVDMAFIKAGKFRMGTDEPYHLADGEGPSRVVELSDYYIDRYMVTTRDFSEFVSNTSYVTDSEKYGWSFVFHLMLSPSQQRRIHQAVAGAEWWLPVQGASWRYPEGRDGSDALLDGRDNHPATHVSWNDAEAFCKWRGGRLPTEAEWEKAAQGTVVGDENGRDDSLSGGEEYLREPSLYPWGDNLKSPGGEHRANTWQVRF 984
            + +DCGC+  L SRK     V    QTS            N VN E +M+FIK G F+MGT++P  +ADGEGP+R V L+D+YIDR+ V+ RDF  FV  T Y+T+++K+G SFV   ++S   ++RI QAVA A WWLPV+GA W++PEG+D   + +  R +HP  HVSWNDA  +CKW G RLPTEAEWE A +G +                      L+PWG+ L  P  +H AN WQ +F
Sbjct:   30 EKSDCGCS--LPSRKKDTDNVLDDVQTS------------NNVNFE-EMSFIKGGTFQMGTNKPVFIADGEGPARNVTLTDFYIDRHEVSNRDFEIFVQTTGYITEAQKFGNSFVLDNLISEDTKKRITQAVAAAPWWLPVEGADWQHPEGKD---STIKDRMDHPVIHVSWNDAITYCKWLGKRLPTEAEWEFACRGGL-------------------HDRLFPWGNKLM-PKNKHYANIWQGKF 237          
BLAST of mRNA_C-tenellus_contig7695.1.3 vs. uniprot
Match: A0A8C5JMQ8_JUNHY (Sulfatase modifying factor 1 n=1 Tax=Junco hyemalis TaxID=40217 RepID=A0A8C5JMQ8_JUNHY)

HSP 1 Score: 202 bits (514), Expect = 3.890e-57
Identity = 115/244 (47.13%), Postives = 142/244 (58.20%), Query Frame = 1
Query:  256 ADCGCTAGLESRKAVGGVTGLGQTSGGQPGSFCHLGANGVNG-EVDMAFIKAGKFRMGTDEPYHLADGEGPSRVVELSDYYIDRYMVTTRDFSEFVSNTSYVTDSEKYGWSFVFHLMLSPSQQRRIHQAVAGAEWWLPVQGASWRYPEGRDGSDALLDGRDNHPATHVSWNDAEAFCKWRGGRLPTEAEWEKAAQGTVVGDENGRDDSLSGGEEYLREPSLYPWGDNLKSPGGEHRANTWQVRF 984
            A CGC+A   SR A     G G+    Q  S      +G +G +  M  I AG F MGT EP    DGEGP+R V L  +Y+D+Y V+ RDF  FV+ T YVT++EK+G SFVF  MLS + +  IHQAVA A WWLPV+GASWR+PEG   S   +  R +HP  HVSWNDA AFC+W G RLPTEAEWE   +G +                   E  L+PWG+ L+ P G+H AN WQ  F
Sbjct:   42 AGCGCSA---SRAA-----GDGREEAAQRYSAAAAAGSGRSGGQGPMVLIPAGVFTMGTQEPQIQQDGEGPARRVRLGSFYMDQYEVSNRDFESFVNATGYVTEAEKFGDSFVFEGMLSEAVKADIHQAVAAAPWWLPVKGASWRHPEGPGSS---ISSRMDHPVLHVSWNDALAFCRWAGKRLPTEAEWEYGCRGGL-------------------ESRLFPWGNKLQ-PKGQHYANIWQGEF 254          
BLAST of mRNA_C-tenellus_contig7695.1.3 vs. uniprot
Match: A0A8C3M9U3_GEOPR (Sulfatase modifying factor 1 n=3 Tax=Geospiza parvula TaxID=87175 RepID=A0A8C3M9U3_GEOPR)

HSP 1 Score: 202 bits (513), Expect = 4.270e-57
Identity = 101/200 (50.50%), Postives = 126/200 (63.00%), Query Frame = 1
Query:  385 VDMAFIKAGKFRMGTDEPYHLADGEGPSRVVELSDYYIDRYMVTTRDFSEFVSNTSYVTDSEKYGWSFVFHLMLSPSQQRRIHQAVAGAEWWLPVQGASWRYPEGRDGSDALLDGRDNHPATHVSWNDAEAFCKWRGGRLPTEAEWEKAAQGTVVGDENGRDDSLSGGEEYLREPSLYPWGDNLKSPGGEHRANTWQVRF 984
            V M  I AG F MGT EP    DGEGP+R V L  +Y+D+Y V+  DF  FV++T Y+T++EK+G SFVF  MLS + +  IHQAVA A WWLPV+GASWR+PEG D S   +  R +HP  HVSWNDA AFC+W G RLPTEAEWE + +G +                   E  L+PWG+ L+ P G+H AN WQ  F
Sbjct:   60 VQMVLIPAGVFTMGTQEPQIQQDGEGPARRVHLGSFYMDQYEVSNLDFESFVNSTGYITEAEKFGDSFVFEGMLSEAVKADIHQAVAAAPWWLPVKGASWRHPEGPDSS---ISSRMDHPVLHVSWNDALAFCRWAGKRLPTEAEWEYSCRGGL-------------------ENRLFPWGNKLQ-PKGQHYANIWQGEF 236          
BLAST of mRNA_C-tenellus_contig7695.1.3 vs. uniprot
Match: UPI0011AE42C0 (formylglycine-generating enzyme isoform X2 n=1 Tax=Serinus canaria TaxID=9135 RepID=UPI0011AE42C0)

HSP 1 Score: 201 bits (511), Expect = 4.680e-57
Identity = 106/218 (48.62%), Postives = 132/218 (60.55%), Query Frame = 1
Query:  331 GGQPGSFCHLGANGVNGEVDMAFIKAGKFRMGTDEPYHLADGEGPSRVVELSDYYIDRYMVTTRDFSEFVSNTSYVTDSEKYGWSFVFHLMLSPSQQRRIHQAVAGAEWWLPVQGASWRYPEGRDGSDALLDGRDNHPATHVSWNDAEAFCKWRGGRLPTEAEWEKAAQGTVVGDENGRDDSLSGGEEYLREPSLYPWGDNLKSPGGEHRANTWQVRF 984
            GG+PG        G  G   M  I AG F MGT EP    DGEGP+R V L  +Y+D+Y V+  DF  FV++T Y+T++EK+G SFVF  MLS + +  IHQAVA A WWLPV+GASWR+PEG D S   +  R +HP  HVSWNDA AFC+W G RLPTEAEWE + +G +                   E  L+PWG+ L+ P G+H AN WQ  F
Sbjct:   23 GGEPGIVSPCWRGGEPGI--MVLIPAGVFTMGTQEPQIQQDGEGPARRVHLGSFYMDQYEVSNLDFESFVNSTGYITEAEKFGDSFVFEGMLSEAVKADIHQAVAAAPWWLPVKGASWRHPEGPDSS---ISSRMDHPVLHVSWNDALAFCRWAGKRLPTEAEWEYSCRGGL-------------------ENRLFPWGNKLQ-PKGQHYANIWQGEF 215          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7695.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYY5_9PHAE4.540e-7360.10FGE-sulfatase domain-containing protein n=1 Tax=Ec... [more]
A0A6U1N9Z0_9STRA3.040e-6352.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4DBW2_HETAK3.110e-5850.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8C3M3W4_GEOPR1.130e-5750.50Sulfatase modifying factor 1 n=24 Tax=Passeriforme... [more]
UPI0018D4FD741.200e-5746.91formylglycine-generating enzyme isoform X2 n=1 Tax... [more]
A0A8C9NUI2_SERCA2.740e-5750.50Sulfatase modifying factor 1 n=3 Tax=Serinus canar... [more]
UPI000C6C8EE02.800e-5745.12sulfatase-modifying factor 1-like n=1 Tax=Centruro... [more]
A0A8C5JMQ8_JUNHY3.890e-5747.13Sulfatase modifying factor 1 n=1 Tax=Junco hyemali... [more]
A0A8C3M9U3_GEOPR4.270e-5750.50Sulfatase modifying factor 1 n=3 Tax=Geospiza parv... [more]
UPI0011AE42C04.680e-5748.62formylglycine-generating enzyme isoform X2 n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7695contigC-tenellus_contig7695:77..4462 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog136037.KDR21085
Preferred nameSUMF1
PFAMsFGE-sulfatase
Model size1441
Max annot lvl33208|Metazoa
KEGG koko:K13444
KEGG Pathwayko04142,map04142
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0006464,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006687,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016491,GO:0016667,GO:0016670,GO:0018158,GO:0019538,GO:0031974,GO:0036211,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0046983,GO:0055114,GO:0070013,GO:0071704,GO:0120147,GO:1901135,GO:1901564,GO:1903135,GO:1903509
Exons6
Evalue5.78e-60
EggNOG OGsCOG1262@1|root,2QVDG@2759|Eukaryota,38C17@33154|Opisthokonta,3B9T4@33208|Metazoa,3CX3Y@33213|Bilateria,41TBX@6656|Arthropoda,3SG9Y@50557|Insecta
Ec32 ortholog descriptionC-type lectin fold
Ec32 orthologEc-16_003850.1
EC1.8.3.7
DescriptionSulfatase-modifying factor
Cds size597
COG categoryS
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7695.1.3prot_C-tenellus_contig7695.1.3Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7695 659..4072 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790052.4493532-UTR-C-tenellus_contig7695:76..3551680790052.4493532-UTR-C-tenellus_contig7695:76..355Choristocarpus tenellus KU2346UTRC-tenellus_contig7695 77..355 -
1680790052.4618716-UTR-C-tenellus_contig7695:483..6581680790052.4618716-UTR-C-tenellus_contig7695:483..658Choristocarpus tenellus KU2346UTRC-tenellus_contig7695 484..658 -
1680790052.5399585-UTR-C-tenellus_contig7695:4072..44621680790052.5399585-UTR-C-tenellus_contig7695:4072..4462Choristocarpus tenellus KU2346UTRC-tenellus_contig7695 4073..4462 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790052.483288-CDS-C-tenellus_contig7695:658..8921680790052.483288-CDS-C-tenellus_contig7695:658..892Choristocarpus tenellus KU2346CDSC-tenellus_contig7695 659..892 -
1680790052.49215-CDS-C-tenellus_contig7695:1387..15041680790052.49215-CDS-C-tenellus_contig7695:1387..1504Choristocarpus tenellus KU2346CDSC-tenellus_contig7695 1388..1504 -
1680790052.5059805-CDS-C-tenellus_contig7695:2444..25771680790052.5059805-CDS-C-tenellus_contig7695:2444..2577Choristocarpus tenellus KU2346CDSC-tenellus_contig7695 2445..2577 -
1680790052.5155716-CDS-C-tenellus_contig7695:3710..37631680790052.5155716-CDS-C-tenellus_contig7695:3710..3763Choristocarpus tenellus KU2346CDSC-tenellus_contig7695 3711..3763 -
1680790052.5283551-CDS-C-tenellus_contig7695:4012..40721680790052.5283551-CDS-C-tenellus_contig7695:4012..4072Choristocarpus tenellus KU2346CDSC-tenellus_contig7695 4013..4072 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7695.1.3

>prot_C-tenellus_contig7695.1.3 ID=prot_C-tenellus_contig7695.1.3|Name=mRNA_C-tenellus_contig7695.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=199bp
MAFIKAGKFRMGTDEPYHLADGEGPSRVVELSDYYIDRYMVTTRDFSEFV
SNTSYVTDSEKYGWSFVFHLMLSPSQQRRIHQAVAGAEWWLPVQGASWRY
PEGRDGSDALLDGRDNHPATHVSWNDAEAFCKWRGGRLPTEAEWEKAAQG
TVVGDENGRDDSLSGGEEYLREPSLYPWGDNLKSPGGEHRANTWQVRF*
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mRNA from alignment at C-tenellus_contig7695:77..4462-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7695.1.3 ID=mRNA_C-tenellus_contig7695.1.3|Name=mRNA_C-tenellus_contig7695.1.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4386bp|location=Sequence derived from alignment at C-tenellus_contig7695:77..4462- (Choristocarpus tenellus KU2346)
TTGGCCGGTCACATGGATAAGTGCACTGCGACTGACATCCACACTCGCTC TTGCTACTCAAATCTTTGCAAATGGTACTGAAGGTGAATTGATAGTTTCG TTGTGGAAGTGGATGGGAAGTCTCTCGTATGTATCATAGGTGGGAGTGAA TGAATCGATTCCATTGTGCTGAGCTTGACACAAAGGTTCTTGTTCTACAA GCCAGATATAGATGTGACCGAGAGTGATGGTAGGTTCGTTCCTTCTGCGG ACAACGCTGACTGTGGTTGCACGGCGGGACTGGAGAGCAGGAAAGCAGTG GGAGGGGTGACAGGTTTGGGTCAAACTAGTGGAGGTCAACCAGGAAGCTT TTGCCATCTTGGGGCGAATGGTGTTAATGGGGAAGTGGATATGGCTTTCA TCAAGGCCGGCAAGTTTCGGATGGGCACGGACGAACCTTACCACTTGGCG GTGAGAGAATGGAGATACACACCTCTCTTCACTTGATATTCGGTGTGTTA GACTAAGCTAGACGGAGGGCATCTACAGAGGTGATATTCTTGCTCTGGAC CACTAACAACGCGTGATAGGAATGCCAGTAAATGAGACCATACAAATCTT CTCACCGCAATGGCGTATTGCTTTCGTATCGCTCACACCAGTTAAGGCAC ACCATGTCTTTCCTTCCCTTTACCGCATATCTCTCGATTATAATTTCAGG ATGGGGAAGGGCCAAGCCGTGTGGTGGAGCTGTCAGATTACTACATAGAT AGGTAACCATTGCTTCGGCCTTGTGGCTATACCACAAGCTCAGCGCTTGT CTGTTCTAGTCTGGAGTGGTTGCTTGATTTCTCCCCCCTACCCTACCCAT GCGGACTAAACCTGACCAGGTTAACACTTAAGCTTCTGGTCTACTCAGGA CAATTTCTCAAAACGTTTGACATGCATTAGTCCTATTTGTCTGCAGCTCG ACCCCCAAGCAATACAACCCTCGTGAATGAGCAGCGACTCGCCTTGTGTT TGTCTCCTCTTATGGCCCTTCTCCTTTGTGTATGGTTTCGGCTAATAAGA CAGAGGTTGTTGGGTATAAGATGCATGTCTTTTGGAGCAACAGAGAATTC GTCTGGGATAGGATAATTAAATCTTTTGCTTGCATTGCAGTGCCTAGGTT TACCTGTGAGAGTAGTACAATTACACTGTTCCTTGACAATGAGAAGGGAT GGGATACTATCAGGCAACACAATGATTGCTGGGGGGAGGCGTCAATAATG AGGTATATACTGTAGGTTCGTGCGAATGGGGGGCTTGATTCCATCGATTG GGTTATTGAACATAGCAGTTTGATGGTGGTGTATGGGCAAGATTCCAATG TTGGAATGTGGACATCCAGAGATATGAGATTTTTGGATTTGGTGCTGCAG TAGTAGGTTTACCAGGAAAGTAGGCAAGGGGTGGGAGTGCAGTGATGCCA CTTGAGTTGCAGGGCTCAACTCAGTGAAGGAAGAATGCTGTATCGTGCCT GGGAGTCAGATTCTGACAAGCTTTTGTACTTGTGATTTACTTTGATGCGA CATTACTGTGTAAACATACCACAGAGGAAGAGGGTTCTATATTTTCCCAA CAGCTGGAGGCGTGTCACGACAAGGGAGATGTTGCCATTTTGAATGGACA CGACAAAACATTATCTCATACTTGATGCTCTGGCAGAAGAGGATGTTCTA AGAGGGTAGTATTGCACTAGTACATAGTACTGTTGCTCAGCATTCTGCCC TGAAGCAGGAGACAGGTCAAAGCACCCCGTGCCTTGGTAGATAGTACCTA AATAGCAATGGCATGCAACCGTGAACACCAACCCCCCCCTCCCTCCCAAT GCTCCCCCCAACAACTACAAACCAACGTTGCATAGATACATGGTGACGAC CCGCGACTTCTCTGAGTTTGTCAGCAACACTTCATATGTCACAGATAGTG AGAAGTATGGGTGGTCCTTTGTTTTCCACCTCATGCTATCACCGAGCCAG CAGAGGCGCATTCACCAGGTACAAGTTTACATGAGTTGGTGATGTCTTGC CATAGAACACCCTCACAGTACCCACGGTGCTCTAGAACATGCATATCTAC ATCTGTTTCGCTACTATTTTTTTCCATGATAATTGGTAGCTCTACAGGCA TGCCCATCCGAGGAGGTGTATGGCATTCTGGTGCATGAGAAGGGAACATG TGTCCTCTTGCCCCCTTCCCCCCTTTCCGGTGACCGATGCTTCGCATGGC ATCTTGCCGCATTGGCAGTGAAGGCTTAGAGTGAGTTCATTTCCTTTTGT CCAATCTTCTTAAATGTTTCGCTGTAGTCCTCGCAAACCCTCAGTGCTAC CTAGAAGAGGAAGTATGGTGCAATGCGCTCTCTGGAGATACGAAAGCTGT GCTTTTGCTTCTATTTTTTGACCGTATCTCCTGGAGAGAGAGTTTTTTTT TTAGAACCTTGACAGCTTCTGTTATCTTTCGTTTTCATTGCGAATCGAAA AAATGTCATTTTTTTTTATTTTAACGAGTCATGAGTTTTAGTTGTTTCAT CTCCTAGAAAGAAAAAAAAAGAAGAAATCTTCGCTTACGCGTAACTATCA TCGAAGATCGCTAGCGGGGCACACGAATGCAGGTGCGTGCCTGATCGTCA AGCTCCACGGTGGGCCGTTCCTTGCTTCATGCGGAAAAAAAAAAAAAAAA AAGATCAATCAGCCGATCGAACAAAATCACTCTTCGATTTTTGGTTTCTA TTATTAGTGGTGATTTATTTGAACCGCACCAAACTGTACTCTTTTTGTTA AATGCTAGAACACACACTGCGCGAGCATTGTTCATTCGTTCTGACACGTG GTTAGGAAGCTGTCTTGCGCCCTAGACATGAAAAGGATCCACGCCCCTCC CACCCCGTGGCTTCCCTCCGCATCCTCTGGCATTTACTCACCCTTTGTGT GTGCGCAGGCTGTGGCTGGCGCCGAGTGGTGGCTACCAGTGCAGGGTGCT TCCTGGAGGTATCCGGAAGGACGGGATGGATCGGATGCTCTGTTGGATGG CAGGGATAACCACCCGGCTACTCATGTGGGTGGAGGGTAAATAGTATTTC ATTGGAGAGGGATTGACAATCTATCGGGGGAAGCGCAGAGCTGAGTCGGT ATGGAGACATGTGTTCCTATAAAGGGGTAAAGCTCTGTGTTGTGTGCGAA GAAAATTGACACTGGGTCTGTTCTTGTTTTTTTTTGTTTTTTCCCCCCGA GAGTGTTGATGGTATGGTGTGGCCGAGTTGGTAGCACCACTGGGCCATTG GGAGACTGAAAAGAGACCTGGGGTGATGAATCAAGCAAGGTGCAACCGTC CACATTATTACGTTCTGCGGTAGAAACCGCCACGCCAACTTGTGACCTAC TGAGTACATCGAATAGTGTGTAGTAAGAGAATAGCCCTATGGCTATTAAT TGAAAGTGAGTGACAGCAGAAATGTAGGTATTCAGTTGGTAATCCTATCT TTCTCCGTCCTTGCCGAGGGCTCCTAGCCTTTTACTTTTCCTCCCCCCAT TCTTGCTTGAACTAAAATAGGTTTCGTGGAATGATGCTGAGGCGTTTTGC AAGTGGCGAGGGGGGCGCTTGCCAACTGAGGCAGAGTGGGAGAAGGCTGC CCAGGGTACTGTTGTGGGTGATGAAAATGGAAGGGATGACAGTTTAAGTG GGGGAGAGGAGTATCTGAGGGAGCCAAGTTTGTACCCCTGGGGGGACAAT CTCAAGTCACCTGGTGGGGAGCATCGTGCAAACACTTGGCAGGTGAGGTT CTGATCCAAACAAGGTAGGGGTGTTTGGCTGTAAGGAGGGGGGGTTTGAA AGACAGGTTGTAGGTCAGATAGGGTTACGTATGATCTTGCAACTTACATC AGTGAAGGGGAAGGGCCTCAAAATTCCTACAATAGTACATGCAGAAACTT GTATTTTTATATCATTTTTACTCTTTGATTTGTCGAACAGTACTGGAGTT GTCCCTTGGTACGACAGGTGATATTTCATGAGGGAAGTGAGTCCTTTAGA GAAGCAGGGAGGGTGGGCCCAGTAAGATATTCACCTGGTTGCCTCCAGAG ACTGCTGATCAACACAGTCTCAAGAGAGGCTTCCTTTCCTGGTACCAGAG CATAAATGTTTTTATGGAGGCAAGCAACCACATTCTGCAGGTGCTTGACT GGGGCATATGAGTTTGTGGATAAGGACCCGGAATGATACACTAGTGTTTT GCCTCCTCAAATTACTATTGCCTTGTTCCATATGAGCCCGTGGCCTTGGG ACAGTGGATGGCTTACGTCTTATATCGATGGTCTTCCTGCTGCTTATTTT CTACCATGCAGATTTCAATATTTTGTCTGAATGCCC
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Coding sequence (CDS) from alignment at C-tenellus_contig7695:77..4462-

>mRNA_C-tenellus_contig7695.1.3 ID=mRNA_C-tenellus_contig7695.1.3|Name=mRNA_C-tenellus_contig7695.1.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=597bp|location=Sequence derived from alignment at C-tenellus_contig7695:77..4462- (Choristocarpus tenellus KU2346)
ATGGCTTTCATCAAGGCCGGCAAGTTTCGGATGGGCACGGACGAACCTTA
CCACTTGGCGGATGGGGAAGGGCCAAGCCGTGTGGTGGAGCTGTCAGATT
ACTACATAGATAGATACATGGTGACGACCCGCGACTTCTCTGAGTTTGTC
AGCAACACTTCATATGTCACAGATAGTGAGAAGTATGGGTGGTCCTTTGT
TTTCCACCTCATGCTATCACCGAGCCAGCAGAGGCGCATTCACCAGGCTG
TGGCTGGCGCCGAGTGGTGGCTACCAGTGCAGGGTGCTTCCTGGAGGTAT
CCGGAAGGACGGGATGGATCGGATGCTCTGTTGGATGGCAGGGATAACCA
CCCGGCTACTCATGTTTCGTGGAATGATGCTGAGGCGTTTTGCAAGTGGC
GAGGGGGGCGCTTGCCAACTGAGGCAGAGTGGGAGAAGGCTGCCCAGGGT
ACTGTTGTGGGTGATGAAAATGGAAGGGATGACAGTTTAAGTGGGGGAGA
GGAGTATCTGAGGGAGCCAAGTTTGTACCCCTGGGGGGACAATCTCAAGT
CACCTGGTGGGGAGCATCGTGCAAACACTTGGCAGGTGAGGTTCTGA
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