mRNA_C-tenellus_contig7588.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7588.1.1 vs. uniprot
Match: D7G717_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G717_ECTSI) HSP 1 Score: 215 bits (548), Expect = 3.780e-61 Identity = 119/221 (53.85%), Postives = 164/221 (74.21%), Query Frame = 1 Query: 109 LSALANFTIAFCGSSLAYTVLVLLWRLATYD-SILESNIFKLILAGMGLFQVAWSLGKYEDLMSTS--DLYFGIISTIAAASALRTYMSFVRGPPPRIVDMRGKVVIITGSNTGIGYETAKAIVSNGAHVIMACRSEEKAKAAIERMTKELELVVAAIRNSNEPAVRGNLEFMQIDMSSMASVRAFVEKFKASKLSLDVLILNAGVMMNVR-VYDEGIPQK 759 +S LA FTI +C + +Y V++ +++LAT + S + +F+L+LA +GL Q+A + +ED+MS S ++ +GII+T+AAA+ R Y+ FVRG PR V+M GKVVIITGSNTG+GYETAKA+V+ GAHVIMACRSEEKA+ AIE +T ELE AIR++ + ++G L FM++D+SS+A+VR FV +FKASKL LD LILNAGVM R V +EG+ Sbjct: 2 VSTLARFTIYWCCVAASYVVVLGMFKLATKEASDRDYGLFQLLLATLGLAQLASMMSNHEDVMSPSMLEINYGIIATVAAAAVARCYLKFVRGVEPRSVNMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKARKAIEDITFELEAAAKAIRHNTDTGIKGKLTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEAN 222
BLAST of mRNA_C-tenellus_contig7588.1.1 vs. uniprot
Match: A0A835YQM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM3_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.150e-35 Identity = 94/220 (42.73%), Postives = 128/220 (58.18%), Query Frame = 1 Query: 118 LANFTIAFCGSSLAYTVLVLLWRLATYDSILES-NIFKLILAGMGLFQVAW-------SLGKYE-DLMSTSDLYFGIISTIAAASALRTYMSFVRGPPPRIVDMRGKVVIITGSNTGIGYETAKAIVSNGAHVIMACRSEEKAKAAIERMTKELELVVAAIRN--SNEPAVRGNLEFMQIDMSSMASVRAFVEKFKASKLSLDVLILNAGVMMNVRVYDE 744 L F + S AYT +V +W + +S L + + K +LA GL + W SLG + L+S ++ A S + TY + + G P VDM+GKVV++TG+N GIG ETAKA++ GAHVI+ACRSEE+AK AIE MT+ L L VAA+ P +RG FM +D+ S+ SVR F +++ KL LDVL+LNAGVMM R E Sbjct: 14 LDKFCVFISMISCAYTTIVAVWSIGFGESELFNWRLIKHVLASCGLVNMTWLMFSSGTSLGMWRIPLLS-------LMGMTAMLSGIMTYRTHIMGRAPEHVDMQGKVVVVTGANAGIGLETAKALMGMGAHVILACRSEERAKEAIETMTRGL-LNVAALERPRGGVPTLRGKATFMPLDLCSLKSVRNFATEYRKRKLPLDVLVLNAGVMMGRRTVTE 225
BLAST of mRNA_C-tenellus_contig7588.1.1 vs. uniprot
Match: A0A024U8M0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U8M0_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.900e-21 Identity = 65/187 (34.76%), Postives = 101/187 (54.01%), Query Frame = 1 Query: 160 YTVLVLLWRLATYDSILESNIFKL-ILAGMGLFQVAWSLGKYEDLMSTSDLYFGIISTIAAASALRTYMSFVRGPPPRIVDMRGKVVIITGSNTGIGYETAKAIVSNGAHVIMACRSEEKAKAAIERMTKELELVVAAIRNSNEPAVRGNLEFMQIDMSSMASVRAFVEKFKASKLSLDVLILNAGV 717 YT++VL+ R+ D + K L G+ + W + Y L I+ +A A+A+ + +RG V + KV I+TG+N+GIG ETA+ + GAHV+ ACRS+E+A+AAI + K + L+F+Q+D++ + SVRAF E F+ +KL LD+L+ NAGV Sbjct: 14 YTMIVLVSRVLLCDIDPGHDYVKRHALTGLACIWLTWDVSNYLWLR-------WIMEVVAVANAVSCHSMVIRGYGYTRVSLHDKVAIVTGANSGIGLETARQLAQQGAHVVFACRSQERAEAAIASVAKSV-------------GSSAKLQFLQVDLADLKSVRAFAEAFRKTKLPLDILVNNAGV 180
BLAST of mRNA_C-tenellus_contig7588.1.1 vs. uniprot
Match: W4GXU1_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXU1_9STRA) HSP 1 Score: 104 bits (260), Expect = 7.440e-21 Identity = 66/188 (35.11%), Postives = 101/188 (53.72%), Query Frame = 1 Query: 157 AYTVLVLLWRLATYDSILESNIFKL-ILAGMGLFQVAWSLGKYEDLMSTSDLYFGIISTIAAASALRTYMSFVRGPPPRIVDMRGKVVIITGSNTGIGYETAKAIVSNGAHVIMACRSEEKAKAAIERMTKELELVVAAIRNSNEPAVRGNLEFMQIDMSSMASVRAFVEKFKASKLSLDVLILNAGV 717 AYT+LVL+ R+ D + K L + ++W L Y L I+ +A +A + +RG V ++GKV I+TG+N GIG ETA+ + GAHV+ ACRS+E+A+AAI+ + K + A L+F+ +D++ S+RAF + F+ SKL LD+L+ NAGV Sbjct: 14 AYTLLVLISRVLLCDIDPGHDYVKRHALTALACIWLSWDLNNYLWLR-------WIMDVVAVVNAYSCHSMVIRGNGYTSVSLKGKVAIVTGANNGIGLETARQLAKQGAHVVFACRSKERAEAAIKSVAKSV------------GASAATLQFLPLDLADSKSIRAFADLFRKSKLPLDILVNNAGV 182
BLAST of mRNA_C-tenellus_contig7588.1.1 vs. uniprot
Match: K1PV89_CRAGI (WW domain-containing oxidoreductase n=4 Tax=Crassostrea gigas TaxID=29159 RepID=K1PV89_CRAGI) HSP 1 Score: 102 bits (253), Expect = 1.070e-20 Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 385 PRIVDMRGKVVIITGSNTGIGYETAKAIVSNGAHVIMACRSEEKAKAAIERMTKELELVVAAIRNSNEPAVRGNLEFMQIDMSSMASVRAFVEKFKASKLSLDVLILNAGVMMNVRVYDE 744 P++ +VV++TG NTGIGYET+K I GA VI+ACRSEE+AK AIE+M KE E A R ++EFM +D++S++SV F+E FK+ K L +L+ NAG+ M+ Y E Sbjct: 8 PQVPLTTDRVVLVTGGNTGIGYETSKWIAMMGARVIIACRSEERAKNAIEKMQKEFEEEKAKGTAGICSKERLDVEFMALDLASLSSVENFIETFKSKKTKLHLLLCNAGIAMHPLEYTE 127
BLAST of mRNA_C-tenellus_contig7588.1.1 vs. uniprot
Match: A0A8B8ASB6_CRAVI (dehydrogenase/reductase SDR family member on chromosome X-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8ASB6_CRAVI) HSP 1 Score: 102 bits (253), Expect = 3.070e-20 Identity = 57/124 (45.97%), Postives = 81/124 (65.32%), Query Frame = 1 Query: 385 PRIVDMRGKVVIITGSNTGIGYETAKAIVSNGAHVIMACRSEEKAKAAIERMTKELELVVAAIRNSNEPAVRGN----LEFMQIDMSSMASVRAFVEKFKASKLSLDVLILNAGVMMNVRVYDE 744 P++ VV+ITG NTGIGYETAK I GA VI+ACRSEE+AK AIE+M +E E ++ + P V +EFM++D++S+ SV +FVE FKA + L +L+ NAG+ ++ + Y E Sbjct: 8 PQVSLTTDHVVLITGGNTGIGYETAKWIAMMGARVIIACRSEERAKKAIEKMQEEFE----GEKSKSTPGVCSRETLAVEFMKLDLTSLKSVESFVESFKAKESKLHILLCNAGIAIHEQEYTE 127
BLAST of mRNA_C-tenellus_contig7588.1.1 vs. uniprot
Match: A0A6J8CBX1_MYTCO (Uncharacterized protein n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8CBX1_MYTCO) HSP 1 Score: 100 bits (250), Expect = 8.820e-20 Identity = 51/120 (42.50%), Postives = 79/120 (65.83%), Query Frame = 1 Query: 385 PRIVDMRGKVVIITGSNTGIGYETAKAIVSNGAHVIMACRSEEKAKAAIERMTKELELVVAAIRNSNEPAVRGNLEFMQIDMSSMASVRAFVEKFKASKLSLDVLILNAGVMMNVRVYDE 744 P + R K+VI+TG+N+G+GYETAK I GAHV++ACRSEEKA+ A+ RM +E + ++ ++EFM++D++S+ S +AF++ FKA L++LI NAG+ +V E Sbjct: 8 PMVSQPRDKIVIVTGANSGVGYETAKFIAMMGAHVVLACRSEEKARDAMRRMNEEFQTEKQLRADNVITDDELDIEFMKLDLASLKSTKAFIDNFKAKHKKLNLLICNAGIYSPHQVTTE 127
BLAST of mRNA_C-tenellus_contig7588.1.1 vs. uniprot
Match: A0A7S2YCV2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YCV2_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.220e-19 Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 376 GPPPRIVDMRGKVVIITGSNTGIGYETAKAIVSNGAHVIMACRSEEKAKAAIERMTKELELVVAAIRNSNEPAVRGNLEFMQIDMSSMASVRAFVEKFKASKLSLDVLILNAGVMM 723 GP P++ DM G+VV+ITG+NTGIG ETA+ + + GA VIMACRS KA+ A +V++++ S + A + LE + +D+SS+ SVR K L +DVLILNAGVMM Sbjct: 8 GPAPQLSDMTGQVVLITGANTGIGKETAQQLAAQGATVIMACRSAAKAQLARND-------IVSSLQRSGQGA-QPRLEILSLDLSSLESVRKAAADLKQRSLVVDVLILNAGVMM 115
BLAST of mRNA_C-tenellus_contig7588.1.1 vs. uniprot
Match: A0A813HIG6_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HIG6_POLGL) HSP 1 Score: 99.4 bits (246), Expect = 1.310e-19 Identity = 58/134 (43.28%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 337 AASALRTYMSFVRGPPPRIV--DMRGKVVIITGSNTGIGYETAKAIVSNGAHVIMACRSEEKAKAAIERMTKELELVVAAIRNSNEPAVRGNLEFMQIDMSSMASVRAFVEKFKASKLSLDVLILNAGVMMNVR 732 AA ++ + VRGP P + M+G+V I+TG NTGIGYETA+A+ VI ACRSE+KA+AAI RM ++ R + + + L F+ +D++S+ SVR FV+ S L + +LILNAGVM+ R Sbjct: 126 AAVSVCAWRVMVRGPCPTVAPGSMKGRVSIVTGCNTGIGYETAQALAEADGTVIFACRSEDKARAAIARMMEDS-------RAAGKELSKDQLLFLPLDLASLESVRGFVDAVDRSGLEVHLLILNAGVMLGSR 252
BLAST of mRNA_C-tenellus_contig7588.1.1 vs. uniprot
Match: D0NIY9_PHYIT (Glycoside hydrolase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NIY9_PHYIT) HSP 1 Score: 95.1 bits (235), Expect = 1.460e-19 Identity = 50/116 (43.10%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 388 RIVDMRGKVVIITGSNTGIGYETAKAIVSNGAHVIMACRSEEKAKAAIERMTKELELVVAAIRNSNEPAVRGNLEFMQIDMSSMASVRAFVEKFKASKLSLDVLILNAGVMMNVRV 735 +I +GKV +ITGSN+GIGYETA + NGAHV++ACR+EE+ + A + + L + A G +EFMQ+D+S ++SV+ F E+FK + L++LI NAG+M V + Sbjct: 18 QIPSQKGKVAVITGSNSGIGYETALQLARNGAHVVLACRNEERGREAEASIREALATIPDA----------GTVEFMQVDVSDLSSVKQFTEEFKKTHNRLNLLINNAGIMGGVYI 123 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7588.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7588.1.1 >prot_C-tenellus_contig7588.1.1 ID=prot_C-tenellus_contig7588.1.1|Name=mRNA_C-tenellus_contig7588.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=232bp MEETVAMEPEATQPLSALANFTIAFCGSSLAYTVLVLLWRLATYDSILESback to top mRNA from alignment at C-tenellus_contig7588:1835..6697+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7588.1.1 ID=mRNA_C-tenellus_contig7588.1.1|Name=mRNA_C-tenellus_contig7588.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4863bp|location=Sequence derived from alignment at C-tenellus_contig7588:1835..6697+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7588:1835..6697+ >mRNA_C-tenellus_contig7588.1.1 ID=mRNA_C-tenellus_contig7588.1.1|Name=mRNA_C-tenellus_contig7588.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=696bp|location=Sequence derived from alignment at C-tenellus_contig7588:1835..6697+ (Choristocarpus tenellus KU2346)back to top |