mRNA_C-tenellus_contig7046.1.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7046.1.2
Unique NamemRNA_C-tenellus_contig7046.1.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7046.1.2 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI)

HSP 1 Score: 566 bits (1460), Expect = 8.140e-187
Identity = 306/674 (45.40%), Postives = 390/674 (57.86%), Query Frame = 1
Query:    1 LGFQALNYYHIRDGKPGSAYPWLEGTQLVEPFSPTTLSVRKPIEGMTYQWTI-----------TPAAEGAEP-------VTAMGDGAVVMFEHQEENTVMVEELNSD-GVIVRRFKDVVMCKYVRREIRTLTDEDREELLDAMYVMWEL--DTVEGREKYGPDYMSVWDLGLLHFLAGEDVECDHFHHGLGFLTSHVLITNVFEVSLQTINPRLAMPYWDFTIE-TAIGS------DSDFQRLSPLFGESWFGGHDPVDFQVKDGRWGNLKIPDVSPEMNNDGL--ANVYGKLRAPWNTNNREYITRGFGEFCGGDATSAQALPSCADHYSLTTDYNTFYGWSWYALVDPHGPIHLWIGGILDCQETFNDIANLVGVETTMDLRKLAITHRKTLYRDGLLFCKDDTPQYLDTFEVISHCYCGCLDLSFEKGSDDYLKVLESMDIDQTYVSAKDFDEDTRREVARLMCNRPVNDGDQVQASSPLDPTFWPTHGTMERLMQYKLLTGTLTDTTWPDHTATYTDEDGEKYDIVVSS--DASGQCVGHRGSDKFPFGF--KETTGQTLPVTIWGETAI-DKFTNREVLRALDPHENALPYVYDTFTWPHCEKIGYDFHDAWDTTGYGAGGAAAVSAVNGEGKHARPKTGVTPLGKTGDNYAIFKEGAPRQDPWSSLME 1917
            L F ALN+YH+RDGKP   YPWL+  +L+EP   TTL V  P +G  Y+W +            PA+   E         TA G  AVV+F H  EN+V +EE+NSD GV+ RR ++ VM KYVRREIRTLTD++REEL DAM+ +WE+  D   G+E YG DY  ++ +  LH+ A     CDHFH GLGFLTSH +I+N FE SLQ +NP+L +PYWDFTIE T +G       D      SPLF   WFG  DP D  VKDGRW   +IP V    NN GL   +VYGKLRAPWN N+R+Y+TRG GE CG D   A   P+C  HY L T Y+ FY W W +L DPHGP+H+W+GG+LDC+ET+  I  LVG      L + +  HRK LYRDG+  C D       + E +    CGCL  +  +G+D Y ++  +M +    +   D+D DT+R+V   +C   + DGD +QASS LDP+FW TH TMERL  Y +LTG +TD +WPD   TYT  DG    +V  S  +    C GH GSD FPFG    +T G  +   I   +A  ++ TNRE L+A DP  NALPYVYDTF W HC   GYDF DAW +           S    +   ARP                F++G PR   +SS ++
Sbjct:  133 LSFTALNFYHVRDGKPAQDYPWLKDVKLIEPHRETTLDVETPRDGFEYRWKVLLGAPVSITDSAPASSFEEEGVTEEVVATASGAEAVVVFTHLGENSVSLEEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFALWEVRVDGGNGKELYGEDYADIYAINRLHYKAASQSSCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGGLEGTVDDGGPLTRSPLFRPDWFGTFDPEDNMVKDGRWAFTEIPRVFE--NNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMEKAFPWPTCTSHYDLATGYSDFYSWVWQSLYDPHGPVHIWVGGVLDCEETYERIEGLVGKIAASQLAEQSFIHRKNLYRDGIFKC-DGRADVAQSSEEVMLSRCGCLGYNLTEGND-YERIYHTMSVIDDVIG--DYDADTKRQVVEAICTTTLVDGDHLQASSSLDPSFWSTHPTMERLWMYVVLTGQITDWSWPDADVTYTTPDGT---VVTESLSEYEESCFGHHGSDVFPFGLLDTDTDGFEIKTGISFNSATGNELTNREALQAFDPRINALPYVYDTFNWEHCAADGYDFGDAWQS-----------STKKSKSTSARP---------------AFEDGVPRAPMYSSTLK 771          
BLAST of mRNA_C-tenellus_contig7046.1.2 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE)

HSP 1 Score: 561 bits (1445), Expect = 9.470e-185
Identity = 296/627 (47.21%), Postives = 382/627 (60.93%), Query Frame = 1
Query:    1 LGFQALNYYHIRDGKPGSAYPWLEGTQLVEPFSPTTLSVRKPIEGMTYQWTITPAAEGAEPVTAM-GDGAVVMFE--HQEENTVMVEELN-SDGVIVRRFKDVVMCKYVRREIRTLTDEDREELLDAMYVMWELDTVEG--REKYGPDYMSVWDLGLLHFLAGEDVECDHFHHGLGFLTSHVLITNVFEVSLQTINPRLAMPYWDFTIETAIGSDSDFQRLSPLFG---------ESWFGGHDPVDFQVKDGRWGNLKIPDVSPEMNNDGLANVYGKLRAPWNTNNREYITRGFGEFCGGDATSAQALPSCADHYSLTTDYNTFYGWSWYALVDPHGPIHLWIGGILDCQETFN-DIANLVGVETTMDLRKLAITHRKTLYRDGLLFCKDDTPQYLDTFEVISHCYCGCLDLSFEKGSDDYLKVLESMDIDQTYVSAKDFDEDTRREVARLMCNRPVNDGDQVQASSPLDPTFWPTHGTMERLMQYKLLTGTLTDTTWPDHTATYTDEDGEKYDIVVSSDASGQCVGHRGSDKFPFGF--KETTGQTLPVTIWGET--AIDKFTNREVLRALDPHENALPYVYDTFTWPHCEKIGYDFHDAW-------DTTGYGAGGAAAVSAVNG 1800
            L F A N+YH+RDGKP S YPWL   +LVEP   TTLSV  P EG  Y+W I   +  ++  TA  G  AVV+ E  H EEN V +EE+  + G + RR  + VM KYVRREIRTLT E+REELLDAM  +W +   +G  REKYG +Y  +W +  LHF A     CDHFH GLGFLT+H L++N FE SLQ +NP+L +PYWDFTIE++    +  + L  +FG         ESWFG  DP    V++GRW N+ IP +     +    +VY KLR+PWN N+R YI+RG G+ C   A +    P+C  HY+L T +  FY W W +L DPHGP+H+WIGG++DC+ET+  DI +LVG ET +DL  +A  HRK ++RDG+  C+          EV+    CGC      +G DDYL++ ESM   +  +   D DE+T+RE+ R+MC+ P+N+GD +Q+SS LDP+FW TH TMERL  Y +LTG +TD  WPD   TYT  DG  Y   +S   S +C+GHRGSD FPF     E    T+   I G      +  TNREVL A DP  NALPYVYDTF W HC + G+D  DAW        + G G GG A +SA  G
Sbjct:  106 LAFHARNFYHVRDGKPASDYPWLRDVKLVEPHRETTLSVDDPREGFEYRWLIRGGSSASKVHTAASGAEAVVVLEAKHLEENLVTLEEVEIATGAVARRLDEFVMVKYVRREIRTLTYEEREELLDAMLELWNVRVQDGDGREKYGENYSDIWAINRLHFKAASPQFCDHFHDGLGFLTNHGLVSNTFENSLQQVNPKLTLPYWDFTIESSTAGIAANEHLDDMFGSKIKTPLLQESWFGTADPTTRMVQNGRWANVPIPKMREGNPSKIEPDVYSKLRSPWNVNDRRYISRGMGQMCHARAETFYPWPTCESHYNLATSFTDFYSWVWESLYDPHGPVHIWIGGVMDCEETYGVDIEHLVGEETALDLALMAFVHRKDMFRDGIFSCEGSVAVTESPDEVLESGVCGCHGYDLTQG-DDYLQIFESMVFMKELMG--DSDENTKRELVRVMCSTPINEGDHLQSSSSLDPSFWSTHPTMERLWMYSVLTGQVTDFEWPDADVTYTASDGTTYSQPISK-YSEECLGHRGSDVFPFDILANEVNDFTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRDAWLAKGDEEASRGEGPGGQA-MSAKKG 727          
BLAST of mRNA_C-tenellus_contig7046.1.2 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI)

HSP 1 Score: 558 bits (1437), Expect = 3.660e-183
Identity = 296/655 (45.19%), Postives = 388/655 (59.24%), Query Frame = 1
Query:    1 LGFQALNYYHIRDGKPGSAYPWLEGTQLVEPFSPTTLSVRKPIEGMTYQWTITP--AAEGAEPVTAMGDGAVVMFEHQEENTVMVEELNSDGVIVRRFKDVVMCKYVRREIRTLTDEDREELLDAMYVMWEL--DTVEGREKYGPDYMSVWDLGLLHFLAGEDVECDHFHHGLGFLTSHVLITNVFEVSLQTINPRLAMPYWDFTIETAI-GSDSD----FQRLSPLFGESWFGGHDPVDFQVKDGRWGNLKIPDVSPEMNNDGLA--NVYGKLRAPWNTNNREYITRGFGEFCGGDATSAQALPSCADHYSLTTDYNTFYGWSWYALVDPHGPIHLWIGGILDCQETFNDIANLVGVETTMDLRKLAITHRKTLYRDGLLFCKDDTPQYLDTFEVISHCYCGCLDLSFEKGSDDYLKVLESM-DIDQTYVSAKDFDEDTRREVARLMCNRPVNDGDQVQASSPLDPTFWPTHGTMERLMQYKLLTGTLTDTTWPDHTATYTDEDGEKYDIVVSSDASGQCVGHRGSDKFPFGF--KETTGQTLPVTIWGETAIDKFTNREVLRALDPHENALPYVYDTFTWPHCEKIGYDFHDAWDTTGYGAGGAAAVSAVNGEGKHARPKTGVTPLGKTGDNYAIFKEGAPRQDPWSSLMEKR 1923
            L F+A N+Y +RDGKP   YPWL+  +L+EP   TT +V  P +G  Y+W +    AAEG     A G  + V+    +EN V++EE+++DG +VRR ++ VM KYVRREIRTLTD++REEL DAM+ +W +  D   G+E YG DY  ++ +  LH+      ECDHFH GLGFLT+H++ITN FE SLQT+NP+L +PYWDFTIE++  G+  D     Q  S LF ESWFG  DP D QVKDGRW   +IP +  ++N+ G    +VY KLRAPWN N+R Y+TRG G+ C          P+C  HY L T Y+ FY W WY+L DPHGP+H+WIGG+LDC++TF  IA LVG     DL   +  HRK L+RDG+  C           EV+S   CGC      +G DDY  +  ++ D+D       DFD D +R+V   +C   +NDGD +QASS LDP+F+ TH TMERL  Y +LTG +TD TWPD   T T  DG   ++   S     C GH GSD FPFG    +T G  +   + G    +  TNRE+L+A D   N++ YVYDTF W HCE  G+DF+DAW+    GA  A   S+        RP                FK+GAPR   ++ L EKR
Sbjct:  166 LSFEATNFYQLRDGKPAQDYPWLKDVKLIEPHRETTFTVSSPRDGFDYRWRVFAGSAAEGELCTEATGPESTVVLTTLDENEVVLEEVDADGTVVRRRQEKVMVKYVRREIRTLTDDEREELFDAMFTLWSVRVDGGNGKELYGDDYADIFAINRLHYKGASPYECDHFHDGLGFLTNHIVITNTFEASLQTVNPKLTLPYWDFTIESSTAGTKGDGGYQSQTKSELFQESWFGTADPTDGQVKDGRWAYTEIPKM--KVNDPGAVEPDVYSKLRAPWNVNDRPYLTRGMGKMCDAKVDEWYPWPTCETHYDLATGYSDFYSWVWYSLYDPHGPVHIWIGGVLDCEKTFGAIAELVGPSIAEDLALYSFIHRKNLFRDGIFSCVGSATVVQAPAEVLSSGQCGCRGYDLTQG-DDYESIYYNIVDLDDLI---GDFDADVKRQVVAALCTTTMNDGDHLQASSSLDPSFYATHPTMERLWMYAVLTGQITDFTWPDDDVTITKPDGT-VEVESLSLYGETCQGHGGSDVFPFGILDSDTDGFEVKTGVKGMENGNTLTNRELLQAFDARSNSVSYVYDTFKWTHCEADGFDFNDAWN----GAAQARPTSSSR------RPS---------------FKQGAPRAPMYNILEEKR 788          
BLAST of mRNA_C-tenellus_contig7046.1.2 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE)

HSP 1 Score: 536 bits (1382), Expect = 2.360e-175
Identity = 272/601 (45.26%), Postives = 365/601 (60.73%), Query Frame = 1
Query:    1 LGFQALNYYHIRDGKPGSAYPWLEGTQLVEPFSPTTLSVRKPIEGMTYQWTITPAAEGAEPVTAMGDGA--VVMFEHQEENTVMVEELNSD-GVIVRRFKDVVMCKYVRREIRTLTDEDREELLDAMYVMWELDTV--EGREKYGPDYMSVWDLGLLHFLAGEDVECDHFHHGLGFLTSHVLITNVFEVSLQTINPRLAMPYWDFTIETAIG------SDSDFQRLSPLFGESWFGGHDPVDFQVKDGRWGNLKIPDVSPEMNNDG--LANVYGKLRAPWNTNNREYITRGFGEFCGGDATSAQALPSCADHYSLTTDYNTFYGWSWYALVDPHGPIHLWIGGILDCQETFNDIANLVGVETTMDLRKLAITHRKTLYRDGLLFCKDDTPQYLDTFEVISHCYCGCLDLSFEKGSDDYLKVLESMDIDQTYVSAKDFDEDTRREVARLMCNRPVNDGDQVQASSPLDPTFWPTHGTMERLMQYKLLTGTLTDTTWPDHTATYTDEDG--EKYDIVVSSDASGQCVGHRGSDKFPFGF--KETTGQTLPVTIWGETAI-DKFTNREVLRALDPHENALPYVYDTFTWPHCEKIGYDFHDAWD 1749
            L F+A N+YHIRDGKP   YPWL+  +L+EP   TT +V  P +G  Y+WT+  A    + + A   GA  V++    ++  + +EE+N++ GV+ RR ++ VM KYVRRE+RTLTDE+REEL DAMY +W +      G+E YG DY  ++ +  LH+ A    +CDHFH GLGF+T+H +ITN FE SLQ +NP+L +PYWDFTI+ +        S S  +  S +F   WFG +D  D  +KD RW    IP +  E+NN G    +VY KLRAPWN N+R Y+TRG G  CG   ++    P+C  HY L T Y  FY + W +L DPHGP+H+WIGG+LDC++T+  I NLVG E   +L   +  HRK LYR+G+  C           E++S   CGCL     +G+D Y  + + + +  + +   D D++ +REV  ++C  P NDGD +QASS LDP+FWPTH TMERL  Y +LTG +TD TWPD   T T  DG  E   I +  D    C GHRGSD FPFG    +T   T+   I G     ++ TNREVL+A D   N+LPYVYDTF W HCE  G +F DAW+
Sbjct:  129 LSFEATNFYHIRDGKPALDYPWLKEVKLIEPHRETTFTVSSPRDGFEYRWTVRGADADKDDLRAEASGAETVMILTVLDDTIIDLEEVNTETGVVARRLEEKVMVKYVRRELRTLTDEEREELFDAMYTLWTVRVKGGNGKELYGDDYADIYAINRLHYKAASPQDCDHFHDGLGFMTNHAVITNTFEYSLQRVNPKLTVPYWDFTIDGSSAGGIFGESVSSAETYSKVFTPEWFGTYDEDDNMLKDSRWAFTPIPRM--EVNNPGELTPDVYLKLRAPWNVNDRAYLTRGMGNMCGIPTSNTYPWPTCETHYDLATSYKDFYSYVWDSLYDPHGPVHIWIGGVLDCEQTYTTIRNLVGEEAAGELAMFSFVHRKNLYREGIFQCSGTAGVGQKPEEILSTGQCGCLGYDLTQGTD-YQDIFDRLTMADSIIG--DVDDEVKREVTSIICGTPANDGDHLQASSSLDPSFWPTHPTMERLWMYSILTGHITDFTWPDGDVTVTKPDGTVEVESISLYGDT---CTGHRGSDVFPFGLLDSDTDDFTIKTGIRGNPDTGNQLTNREVLQAFDARSNSLPYVYDTFKWTHCEADGVNFDDAWE 721          
BLAST of mRNA_C-tenellus_contig7046.1.2 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE)

HSP 1 Score: 520 bits (1338), Expect = 6.120e-169
Identity = 271/613 (44.21%), Postives = 355/613 (57.91%), Query Frame = 1
Query:    1 LGFQALNYYHIRDGKPGSAYPWLEGTQLVEPFSPTTLSVRKPIEGMTYQWTITPAAEGAEPVTAMGDGA--VVMFEHQEENTVMVEELNSDGVIVRRFKDVVMCKYVRREIRTLTDEDREELLDAMYVMWEL--DTVEGREKYGPDYMSVWDLGLLHFLAGEDVECDHFHHGLGFLTSHVLITNVFEVSLQTINPRLAMPYWDFTIETAIGS----DSDFQRLSPLFGESWFGGHDPVDFQVKDGRWGNLKIPDVSPEMNNDGLANVYGKLRAPWNTNNREYITRGFGEFCGG-DATSAQALPSCADHYSLTTDYNTFYGWSWYALVDPHGPIHLWIGGILDCQETFNDIANLVGVETTMDLRKLAITHRKTLYRDGLLFCKDDTPQYLDTFEVISHCYCGCLDLSFEKGSDDYLKVLESMDIDQTYVSAKDFDEDTRREVARLMCNRPVNDGDQVQASSPLDPTFWPTHGTMERLMQYKLLTGTLTDTTWPDHTATYTDEDGEKYDIVVSSDASGQCVGHRGSDKFPFGFKETT--GQTLPVTIWGETAI-DKFTNREVLRALDPHENALPYVYDTFTWPHCEKIGYDFHDAWDTTGYGAGGAAAVSAVNGE 1803
            L FQALN+YHIRDGKP   YPWL+  +L+EP   TTL+V  P +G  Y W +         V A   GA  ++     ++N + ++E+NSDG I+R+  ++VM KYVRREIRTLTD++REEL DAM+ +W++  DT  G+E YG DY  ++ +  LHF A     CDHFH GLGFLTSH LI+N FE SLQ +NP+L +PYWDFTIE         D D + +SP+F ESWFG  DP D  VKDGRW   K+P + P    D   +VYG LR+ WN N+  Y+TRG G  C   D T     P+C  HY + T+Y+ FY W W ++  PHGP+H WIGG+L+C+ET   ++ LVG E    L   A   RK  +RDG   C+          +V S   CGCL       SDD+  +  +  ID   V + D+D++T+R V   +C   ++DGD +QA S LDPTFWP H TMERL  +  LTG   D  WPD  A+ ++E   +Y           CVGH GSD FPF   ++   G  +   + G   I + FTNREVL A+DP  N L YVYDTF W HC   GYDF  A+D +   +    A S +  E
Sbjct:  127 LAFQALNFYHIRDGKPAQDYPWLQDVKLIEPHRETTLTVSSPRDGYDYIWEVRSGDTDDTEVRASARGAEALITLTILDDNVITLKEVNSDGEIMRQLDELVMVKYVRREIRTLTDDEREELFDAMFTLWDVRVDTGNGKELYGDDYADIYAINRLHFKAAMSETCDHFHDGLGFLTSHSLISNTFEYSLQRVNPKLTLPYWDFTIEDFEAEKSFDDDDLKIVSPIFQESWFGSADPDDNIVKDGRWAYTKMPAMYPGNPGDLNPDVYGLLRSRWNVNSSPYLTRGMGTLCNTYDVTQIYPWPTCELHYWMATEYSDFYSWVWTSMYAPHGPVHTWIGGVLNCEETMASVSGLVGEENANSLALYAFDQRKNFWRDGFFDCEGTAEAGATEDDVFSAGMCGCLGFDLSSNSDDWQTIYYNSTIDFDNVIS-DYDDETKRMVVAEVCASTIHDGDHLQAGSSLDPTFWPMHPTMERLFMFARLTGNTYDLDWPDADASSSNEMISRY--------GDDCVGHGGSDVFPFNLLDSDHDGFEIKTGMKGNPEIGNSFTNREVLAAMDPRVNQLSYVYDTFKWDHCLGSGYDFDTAFDYSSTASAEDKAKSTMKNE 730          
BLAST of mRNA_C-tenellus_contig7046.1.2 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI)

HSP 1 Score: 513 bits (1320), Expect = 3.820e-167
Identity = 267/599 (44.57%), Postives = 347/599 (57.93%), Query Frame = 1
Query:    1 LGFQALNYYHIRDGKPGSAYPWLEGTQLVEPFSPTTLSVRKPIEGMTYQWTITPAA--EGAEPVTAMGDGAVVMFEHQEENTVMVEELNSDGVIVRRFKDVVMCKYVRREIRTLTDEDREELLDAMYVMWELDTVEGR--EKYGPDYMSVWDLGLLHFLAGEDVECDHFHHGLGFLTSHVLITNVFEVSLQTINPRLAMPYWDFTIE----TAIGSDSDFQRLSPLFGESWFGGHDPVDFQVKDGRWGNLKIPDVSPEMNNDGLANVYGKLRAPWNTNNREYITRGFGEFCGGDATSAQALPSCADHYSLTTDYNTFYGWSWYALVDPHGPIHLWIGGILDCQETFNDIANLVGVETTMDLRKLAITHRKTLYRDGLLFCKDDTPQYLDTFEVISHCYCGCLDLSFEKGSDDYLKVLESMDIDQTYVSAKDFDEDTRREVARLMCNRPVNDGDQVQASSPLDPTFWPTHGTMERLMQYKLLTGTLTDTTWPDHTATYTDEDGEKYDIVVSSDA--SGQCVGHRGSDKFPFGFKETTGQTLPVTIW----GETAIDKFTNREVLRALDPHENALPYVYDTFTWPHCEKIGYDFHDAWDTT 1755
            L F+ALN+YHIRDGKP   Y WL   +L+EP   TTL V  P +G  Y W +      EG    TA G  AVV     +++ + V+E+  DG IVR+  ++VM KYVRREIRTLTDE+R ELLDAM+ +W +    G   E +G  Y  +  +  LHF A ++  CDHFH GLGFLTSH ++TN FE SLQ +NP+L +PYWDFTIE       G D++    SPLF ESWFG  DPVD  VKDGRW N +IP + P    + + +VYG LR+ W  N+  Y+TRG G+ C G        PSC +H++L  DY+ FY W   ++  PHGP+H WIGG+L+C++T + +++LVG +    L       RK L+RDG   C+          E++S   CGCL     +G DD+  +  +  +D   V   D+D++T+R+V   +C   + DGD + A S LDPTFW  H TMERL  +  LTG LTD  WPD   +YTD DG    IVV +       C GH GSD FPF   +       +       GET  +K TNREVL  LD   N LPYVYD F W HC K G DF DAWD +
Sbjct:   93 LSFEALNFYHIRDGKPAQDYTWLRDVKLIEPHRETTLLVSSPRDGYDYIWEVHAGETDEGDLIATASGAEAVVTLTVLDDSMITVKEVLPDGEIVRQLDEMVMVKYVRREIRTLTDEERVELLDAMHQIWTVRVSGGNGIELFGDGYADISSINRLHFKAAQNKSCDHFHDGLGFLTSHSMLTNTFEYSLQRVNPKLTVPYWDFTIEYHEAEIAGDDNEMTINSPLFQESWFGTADPVDNVVKDGRWANTEIPAMDPSSPGELIPDVYGLLRSRWTINSSPYLTRGLGKLCDGSVVDTYGWPSCEEHHNLVMDYDDFYSWVSKSMYSPHGPVHTWIGGVLNCEDTISSVSSLVGEKNANSLSLKTFDQRKNLWRDGFFECEGSAAVGTPADELLSSGKCGCLGYDLSQG-DDWKTIYTNSTVDFDDVIG-DYDDETKRQVVAAVCASTIFDGDHLHAGSSLDPTFWAMHPTMERLFMFSSLTGQLTDFHWPDSEFSYTDSDGN---IVVETTGIYGDTCHGHGGSDVFPFDLLDGDDDAFQIKTGMPGNGETG-NKLTNREVLAVLDARFNMLPYVYDNFRWDHCLKDGIDFEDAWDAS 685          
BLAST of mRNA_C-tenellus_contig7046.1.2 vs. uniprot
Match: A0A6H5K0B2_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0B2_9PHAE)

HSP 1 Score: 508 bits (1307), Expect = 6.040e-164
Identity = 254/604 (42.05%), Postives = 359/604 (59.44%), Query Frame = 1
Query:    1 LGFQALNYYHIRDGKPGSAYPWLEGTQLVEPFSPTTLSVRKPIEGMTYQWTITPAAEGAE----PVTAMGDGAVVMFEHQEENTVMVEELNS---------DGVIVRRFKDVVMCKYVRREIRTLTDEDREELLDAMYVMWELDTVEGREKYGPDYMSVWDLGLLHFLAGEDVECDHFHHGLGFLTSHVLITNVFEVSLQTINPRLAMPYWDFTIETAIGS---DSDFQRL---SPLFGESWFGGHDPVDFQVKDGRWGNLKIPDVSPEMNNDGLANVYGKLRAPWNTNNREYITRGFGEFCGGDATSAQALPSCADHYSLTTDYNTFYGWSWYALVDPHGPIHLWIGGILDCQETFNDIANLVGVETTMDLRKLAITHRKTLYRDGLLFCKDDTPQYLDTFEVISHCYCGCLDLSFEKGSDDYLKVLESMDIDQTYVSAKDFDEDTRREVARLMCNRPVNDGDQVQASSPLDPTFWPTHGTMERLMQYKLLTGTLTDTTWPDHTATYTDEDGEKYDIVVSSDASGQCVGHRGSDKFPFGFKETTGQTLPVTIWGETAIDKFTNREVLRALDPHENALPYVYDTFTWPHCEKIGYDFHDAWDTT 1755
            L F A N Y  R    G  YPWL+   LVEPF  TTL V  P EGM Y WT+ P  E  E    P    G    V+FE   +  V++EE  S         +  +VR     V  KYVRREIR+L D++R+++ DAM V+W++   EG+  YGPDY+ VW +   H +   D++CDH H G+GF  +H ++T +FE SLQ +NP L++PYWDFTIE A+       D+ RL   SPL+   WFGG D  D+QVKDGRWG++ +P V  +  N   A+VYG++R+PWN N+R Y+TRG GE CG D+T   + P C+ HY L   +N++YG++W++   PHGP+H+W+GG +DC++  + +  +VG E  + +       RK ++RD +  C+      +   +V++   CGCLD    +G DDY KV  +      Y   ++F E+  R +A   CN  V  G+  Q+SSPLDPTFW  H TMERL+ +KLL GT TD +WPD   ++   DG +YD+++S+  S  C GHRGSD FP+G       T   T +G+ A +   NR +++  DP ENALP++YD F W HC ++GYDF D +DT+
Sbjct:  121 LSFIASNEYTRRGDIIGLGYPWLQDRILVEPFRTTTLEVVSPKEGMVYSWTVRPVTEVDEQEETPAEYAGPSVDVVFERAPKYQVVLEERASGSGGGDAGEEAAVVRSSDVEVFSKYVRREIRSLFDDERDQMFDAMKVLWDVGIDEGKVLYGPDYLDVWTIDQFHQIGASDLDCDHLHDGIGFGVTHSMVTMMFENSLQLVNPMLSLPYWDFTIEGAVIDREFGGDYTRLTEASPLWTADWFGGVDKRDYQVKDGRWGSIPVPIVDEDKRNYLGADVYGRMRSPWNVNSRPYLTRGLGEMCGLDSTEFYSWPGCSSHYDLQDKFNSYYGYTWWSQYGPHGPVHVWVGGNVDCKKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFADFSVSEEDVMTSGQCGCLDYDLVEG-DDYKKVWTAFT--SFYTFDQEFTEEEMRILATQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIIST-RSDTCNGHRGSDIFPYGIMSDV-ITPQFTFYGKKAPNTMQNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTS 719          
BLAST of mRNA_C-tenellus_contig7046.1.2 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI)

HSP 1 Score: 499 bits (1285), Expect = 1.640e-161
Identity = 268/607 (44.15%), Postives = 350/607 (57.66%), Query Frame = 1
Query:    1 LGFQALNYYHIRDGKPGSAYPWLEGTQLVEPFSPTTLSVRKPIEGMTYQWTITPAAEG----------AEPVTAMGDGAVVMFEHQEENTVMVEELN-SDGVIVRRFKDVVMCKYVRREIRTLTDEDREELLDAMYVMWEL--DTVEGREKYGPDYMSVWDLGLLHFLAGEDVECDHFHHGLGFLTSHVLITNVFEVSLQTINPRLAMPYWDFTIETAIGSDSDFQRLSP-----LFGESWFGGHDPVDFQVKDGRWGNLKIPDVSPEMNNDGLA-NVYGKLRAPWNTNNREYITRGFGEFCGGDATSAQALPSCADHYSLTTDYNTFYGWSWYALVDPHGPIHLWIGGILDCQETFNDIANLVGVETTMDLRKLAITHRKTLYRDGLLFCKDDTPQYLDTFEVISHCYCGCLDLSFEKGSDDYLKVLESMDIDQTYVSAKDFDEDTRREVARLMCNRPVNDGDQVQASSPLDPTFWPTHGTMERLMQYKLLTGTLTDTTWPDHTATYTDEDGEKYDIVVSSDASGQCVGHRGSDKFPFGF--KETTGQTLPVTIWGETAI-DKFTNREVLRALDPHENALPYVYDTFTWPHCEKIGYDFHDAWDTT 1755
            L F ALN+YH+RDGKPG  YPWL+  +LVEP   TTL+V  P EG  Y+W + P   G          + P+ A G  A V+    EEN + +EE+N +DG +VRR ++ VM KYVRREIR+LTD++REELLDAM+ +W++  D   G+E YG  Y  ++ +  LH  A     CDHFH GLGFL SH ++TN FE SLQ +NP+L +PYWDFTIET+  +++ +   SP     L   SWFG  D  D  VKDGRW   +IP V  + N  GL  +VYGKLRAPWNTN+R Y+TRG G+ C  +     A P+C  HY LTT ++TFY W W ++  PH P+HLW+GG +DC  T+  I  LVG      L                            T  ++S   CGC      +GSD Y  V+ESM+  +  +   DFD+ T+R+V   +C   VN G   Q+SS  DP FWP H TMERL Q+ +LTG++ D  W D     T  DG     + S   S  C+GH GSD FP+     +T G  +   I G+  + +  TNRE+L ALDP  N+L YVYD F W HCE  G+DF+DAWD T
Sbjct:  112 LAFTALNFYHVRDGKPGQDYPWLKDFKLVEPHRETTLAVEAPREGFEYRWDVRPTCTGDSCTSSSGGESSPIQAAGAVAEVVLTSLEENMITLEEVNVADGKVVRRLEETVMVKYVRREIRSLTDDEREELLDAMFTIWDVRVDGGNGKELYGDGYADIYAINRLHHKAATHGTCDHFHDGLGFLVSHSVLTNTFEYSLQAVNPKLTVPYWDFTIETSTSTETVYDPASPYTRTPLLDASWFGTADLDDGMVKDGRWAKSEIPKVR-DNNPGGLEPDVYGKLRAPWNTNDRAYLTRGLGQLCQLNTDQLLAWPTCQTHYELTTGFHTFYDWVWDSMKAPHAPLHLWLGGTMDCAGTYEAIGELVGNSIAETL----------------------------TLLLLSSGQCGCHGYDLTQGSD-YKIVMESMEYLEDLIG--DFDDTTQRKVVETLCTGVVNFGSHTQSSSSYDPLFWPIHPTMERLYQFPVLTGSIDDFFWTDADTNVTFADGTTVSEITSV-YSDHCIGHHGSDVFPYYLLDTDTDGFEVKTGIRGQPILGNMLTNREILAALDPRANSLSYVYDKFEWSHCEADGFDFNDAWDDT 685          
BLAST of mRNA_C-tenellus_contig7046.1.2 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI)

HSP 1 Score: 491 bits (1265), Expect = 4.140e-159
Identity = 256/576 (44.44%), Postives = 333/576 (57.81%), Query Frame = 1
Query:   58 YPWLEGTQLVEPFSPTTLSVRKPIEGMTYQWTITPAAEGAEP---VTAMGDGAVVMFEHQEENTVMVEELNSDGVIVRRFKDVVMCKYVRREIRTLTDEDREELLDAMYVMWELDTV--EGREKYGPDYMSVWDLGLLHFLAGEDVECDHFHHGLGFLTSHVLITNVFEVSLQTINPRLAMPYWDFTIE----TAIGSDSDFQRLSPLFGESWFGGHDPVDFQVKDGRWGNLKIPDVSPEMNNDGLANVYGKLRAPWNTNNREYITRGFGEFCGGDATSAQALPSCADHYSLTTDYNTFYGWSWYALVDPHGPIHLWIGGILDCQETFNDIANLVGVETTMDLRKLAITHRKTLYRDGLLFCKDDTPQYLDTFEVISHCYCGCLDLSFEKGSDDYLKVLESMDIDQTYVSAKDFDEDTRREVARLMCNRPVNDGDQVQASSPLDPTFWPTHGTMERLMQYKLLTGTLTDTTWPDHTATYTDEDGEKYDIVVSSDASGQCVGHRGSDKFPFGFKETTGQTLPVTIW---GETAIDKFTNREVLRALDPHENALPYVYDTFTWPHCEKIGYDFHDAWD 1749
            YPWL   +L+EP   T L+V  P +G  Y W +  A E  E     TA G  AVV     +EN + V+E++ DG IVR+  ++VM KYVRREIRTLTDE+R ELLDAM+ +W +     EG E YG DY  +  +  LHF A ++  CDHFH GLGFLTSH ++TN FE SLQ +NP+L +PYWDFTIE       G D D    SPLF ESWFG  DPVD  VKDGRW   +IP +      + + +VYG LR+ W  N+  Y+TRG G+ C G      A PSC +H++L  DY+ FY W   ++  PHGP+H WIGG+L+C++T + I++LVG +    L       RK L+RDG   C+          E++    CGCL     +G DD+  +  +  +D   V   D+D++T+R+V   +C   + DGD + A S LDPTFWP H TMERL  +  LTG LTD  WPD   +Y+D DG    +  +S     C GH GSD FPFG  +       +       E   +K TNREVL  LD   N LPYVYD F W HC + G DF+DAWD
Sbjct:  110 YPWLRDVKLIEPHRETILAVSSPRDGYDYIWEVR-AGETDEADLIATASGAEAVVTLTVLDENMITVKEVHPDGEIVRQLDEMVMVKYVRREIRTLTDEERVELLDAMHQLWAVRVHGGEGIELYGDDYADISSINRLHFKAAQNKSCDHFHDGLGFLTSHSVLTNTFEYSLQRVNPKLTVPYWDFTIEYHEAEIAGDDDDITINSPLFQESWFGTADPVDNVVKDGRWARTEIPAMDLGSPGELIPDVYGLLRSRWTVNSSPYLTRGLGKLCDGSVLDTYAWPSCEEHHNLVMDYDDFYSWVSESMYSPHGPVHTWIGGVLNCEDTISSISSLVGEKNANSLSLNTFDQRKNLWRDGFFACEGSAAVGAPADELLLSGKCGCLGYDLNQG-DDWKTIYTNSTLDFDDVIG-DYDDETKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFHWPDSEFSYSDSDGNTV-VETTSTYGDTCHGHGGSDVFPFGLLDDDDDAFKIKTGMQGNEETGNKLTNREVLAVLDARYNMLPYVYDNFRWDHCLQDGIDFYDAWD 681          
BLAST of mRNA_C-tenellus_contig7046.1.2 vs. uniprot
Match: D7G3A2_ECTSI (Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A2_ECTSI)

HSP 1 Score: 472 bits (1214), Expect = 2.550e-152
Identity = 232/559 (41.50%), Postives = 336/559 (60.11%), Query Frame = 1
Query:  136 MTYQWTITPAAEGAE----PVTAMGDGAVVMFEHQEENTVMVEELNS---------DGVIVRRFKDVVMCKYVRREIRTLTDEDREELLDAMYVMWELDTVEGREKYGPDYMSVWDLGLLHFLAGEDVECDHFHHGLGFLTSHVLITNVFEVSLQTINPRLAMPYWDFTIETAIGS---DSDFQRL---SPLFGESWFGGHDPVDFQVKDGRWGNLKIPDVSPEMNNDGLANVYGKLRAPWNTNNREYITRGFGEFCGGDATSAQALPSCADHYSLTTDYNTFYGWSWYALVDPHGPIHLWIGGILDCQETFNDIANLVGVETTMDLRKLAITHRKTLYRDGLLFCKDDTPQYLDTFEVISHCYCGCLDLSFEKGSDDYLKVLESMDIDQTYVSAKDFDEDTRREVARLMCNRPVNDGDQVQASSPLDPTFWPTHGTMERLMQYKLLTGTLTDTTWPDHTATYTDEDGEKYDIVVSSDASGQCVGHRGSDKFPFGFKETTGQTLPVTIWGETAIDKFTNREVLRALDPHENALPYVYDTFTWPHCEKIGYDFHDAWDTT 1755
            M Y WT+ P  E  E    P    G    V+FE   +  V++EE  S         +  ++R     V  KYVRREIR+L D++R+++ DAM V+W++D  EG+  YGPDY+ VW +   H +   D+ECDH H G+GF  +H ++T +FE SLQ +NP L++PYWDFTIE A+       D+ RL   SPL+   WFGG D  D+QVKDGRWG++ +P V  +  N   A+VYG++R+PWN N+R Y+TRG GE CG D+T   + P C+ HY L   +N++YG++W++   PHGP+H+W+GG +DC++  + +  +VG E  + +       RK ++RD +  C+      +   ++++   CGCLD    +G DDY KV  +      Y   ++F E+  R +A   CN  V  G+  Q+SSPLDPTFW  H TMERL+ +KLL GT TD +WPD   T+   DG +YD+++S+  S  C GHRGSD FP+    T   T   T +G+ A +   NR +++  DP ENALP++YD F W HC ++GYDF D +DT+
Sbjct:    1 MVYSWTVRPVTEVEEQDETPAEYGGPSVDVVFERAPKYQVVLEERASGTGGGDTGEEAPLIRSSDVEVFSKYVRREIRSLFDDERDQMFDAMKVLWDVDIDEGKVLYGPDYLDVWTIDQFHQIGASDLECDHLHDGIGFGITHSMVTMMFENSLQLVNPMLSLPYWDFTIEGAVIDREFGGDYTRLTEASPLWTADWFGGVDKKDYQVKDGRWGSVPVPIVDEDERNFLGADVYGRMRSPWNVNSRPYLTRGLGEMCGLDSTEFYSWPGCSSHYDLQDKFNSYYGYTWWSQYGPHGPVHVWVGGNVDCKKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFADFSVSEEDIMTSGQCGCLDYDLHEG-DDYKKVWTAFT--SFYTFDQEFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGTWVGMDGVEYDVIIST-RSDTCNGHRGSDIFPYDIM-TDVITPQFTFYGKKAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTS 554          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7046.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC42_ECTSI8.140e-18745.40TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpu... [more]
A0A6H5J676_9PHAE9.470e-18547.21TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
D8LC46_ECTSI3.660e-18345.19Tyrosinase_Cu-bd domain-containing protein n=3 Tax... [more]
A0A6H5J7R8_9PHAE2.360e-17545.26TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5JRR4_9PHAE6.120e-16944.21TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
D7FW00_ECTSI3.820e-16744.57Ortho-aminophenol oxidase n=1 Tax=Ectocarpus silic... [more]
A0A6H5K0B2_9PHAE6.040e-16442.05TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LC28_ECTSI1.640e-16144.15TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpu... [more]
D7G9A4_ECTSI4.140e-15944.44Ortho-aminophenol oxidase n=1 Tax=Ectocarpus silic... [more]
D7G3A2_ECTSI2.550e-15241.50Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7046contigC-tenellus_contig7046:782..5159 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009039156.1
PFAMsSBF_like
Model size2766
Max annot lvl2759|Eukaryota
KEGG koko:K14347
KEGG TC2.A.93.1
Hectar predicted targeting categoryother localisation
Exons7
Evalue6.79e-62
EggNOG OGsCOG0385@1|root,KOG4821@2759|Eukaryota
Descriptionsymporter activity
Cds size1794
COG categoryJ
BRITEko00000,ko02000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7046.1.2prot_C-tenellus_contig7046.1.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7046 1619..5024 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790009.331821-UTR-C-tenellus_contig7046:781..16181680790009.331821-UTR-C-tenellus_contig7046:781..1618Choristocarpus tenellus KU2346UTRC-tenellus_contig7046 782..1618 -
1680790009.4231396-UTR-C-tenellus_contig7046:5024..51591680790009.4231396-UTR-C-tenellus_contig7046:5024..5159Choristocarpus tenellus KU2346UTRC-tenellus_contig7046 5025..5159 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790009.3462675-CDS-C-tenellus_contig7046:1618..21341680790009.3462675-CDS-C-tenellus_contig7046:1618..2134Choristocarpus tenellus KU2346CDSC-tenellus_contig7046 1619..2134 -
1680790009.355874-CDS-C-tenellus_contig7046:2284..25321680790009.355874-CDS-C-tenellus_contig7046:2284..2532Choristocarpus tenellus KU2346CDSC-tenellus_contig7046 2285..2532 -
1680790009.3649867-CDS-C-tenellus_contig7046:2835..31821680790009.3649867-CDS-C-tenellus_contig7046:2835..3182Choristocarpus tenellus KU2346CDSC-tenellus_contig7046 2836..3182 -
1680790009.377774-CDS-C-tenellus_contig7046:3611..37301680790009.377774-CDS-C-tenellus_contig7046:3611..3730Choristocarpus tenellus KU2346CDSC-tenellus_contig7046 3612..3730 -
1680790009.389963-CDS-C-tenellus_contig7046:4000..42071680790009.389963-CDS-C-tenellus_contig7046:4000..4207Choristocarpus tenellus KU2346CDSC-tenellus_contig7046 4001..4207 -
1680790009.3995528-CDS-C-tenellus_contig7046:4445..45681680790009.3995528-CDS-C-tenellus_contig7046:4445..4568Choristocarpus tenellus KU2346CDSC-tenellus_contig7046 4446..4568 -
1680790009.408881-CDS-C-tenellus_contig7046:4790..50241680790009.408881-CDS-C-tenellus_contig7046:4790..5024Choristocarpus tenellus KU2346CDSC-tenellus_contig7046 4791..5024 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7046.1.2

>prot_C-tenellus_contig7046.1.2 ID=prot_C-tenellus_contig7046.1.2|Name=mRNA_C-tenellus_contig7046.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=598bp
MTYQWTITPAAEGAEPVTAMGDGAVVMFEHQEENTVMVEELNSDGVIVRR
FKDVVMCKYVRREIRTLTDEDREELLDAMYVMWELDTVEGREKYGPDYMS
VWDLGLLHFLAGEDVECDHFHHGLGFLTSHVLITNVFEVSLQTINPRLAM
PYWDFTIETAIGSDSDFQRLSPLFGESWFGGHDPVDFQVKDGRWGNLKIP
DVSPEMNNDGLANVYGKLRAPWNTNNREYITRGFGEFCGGDATSAQALPS
CADHYSLTTDYNTFYGWSWYALVDPHGPIHLWIGGILDCQETFNDIANLV
GVETTMDLRKLAITHRKTLYRDGLLFCKDDTPQYLDTFEVISHCYCGCLD
LSFEKGSDDYLKVLESMDIDQTYVSAKDFDEDTRREVARLMCNRPVNDGD
QVQASSPLDPTFWPTHGTMERLMQYKLLTGTLTDTTWPDHTATYTDEDGE
KYDIVVSSDASGQCVGHRGSDKFPFGFKETTGQTLPVTIWGETAIDKFTN
REVLRALDPHENALPYVYDTFTWPHCEKIGYDFHDAWDTTGYGAGGAAAV
SAVNGEGKHARPKTGVTPLGKTGDNYAIFKEGAPRQDPWSSLMEKRG*
back to top

mRNA from alignment at C-tenellus_contig7046:782..5159-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7046.1.2 ID=mRNA_C-tenellus_contig7046.1.2|Name=mRNA_C-tenellus_contig7046.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4378bp|location=Sequence derived from alignment at C-tenellus_contig7046:782..5159- (Choristocarpus tenellus KU2346)
CTCGGATTTCAAGCCCTGAACTACTACCATATTAGGGATGGAAAACCGGG ATCCGCTTATCCGTGGTTGGAGGGCACCCAACTGGTGGAGCCATTCAGTC CTACGACGCTGTCAGTTCGAAAGCCAATCGAGGGAATGACCTACCAGTGG ACCATCACTCCTGCAGCTGAGGGAGCCGAGCCTGTGACGGCGATGGGAGA TGGTGCTGTGGTGATGTTTGAGCATCAGGAGGAAAACACTGTGATGGTGG AAGAGCTCAACTCAGATGGGGTGATCGTGAGGCGTTTCAAGGACGTCGTG ATGTGCAAGTATGTTCGCAGGGAGATACGCACTCTGACCGATGAAGATCG CGAGGAACTCCTAGATGCGGTGAGTTGGGGTCCTAGTTCGTGCTGAAAGA ACTTAGCTGATAATTTGATACAGCATGATTATTCCATTGATCGGCAGTGC ACTGTGATGGAGAGACAATGAATGCATTCTTCTCCTCTCACACATTTTGC ATACTGTTGACCTCTAGACGAACCTTGCGATCATTTTACGACATGTCAAG ATGACCACCTCCTGCTATGCTGTTTGTGCCCTTTGTTTTAGATGTACGTC ATGTGGGAGCTGGACACGGTGGAGGGTAGAGAAAAGTACGGTCCTGACTA CATGAGTGTGTGGGACCTGGGATTGCTACATTTCCTTGCCGGTGAAGATG TAGAATGCGACCATGTGAGATGATGTAAAGATTGACTGTGGTTGGCAGGT CACGACGGGGGGGACTGTATGCCGTTACCTTCCTGCAATCTTTCTACTCA AATGTTGAGAATTACCATGTATGTATTGGTGGTACACGCTGTAAAGTGGT TCTCATGTTCATGTGGTGGGCAGGAAGTAATGCCAATTGCTGCGATAAGC CAGCTAATGAATGTCTTGTGCAATTGCTGCCCCGTAATTGTTCTTCTGTC AGTTCCATCACGGGCTAGGGTTCCTTACAAGTCATGTCCTGATCACCAAT GTGTTCGAGGTCAGTCTCCAGACGATAAATCCTAGGTTGGCAATGCCATA CTGGGACTTCACGATTGAGACAGCAATTGGATCGGATTCGGACTTCCAAA GGCTGAGCCCACTGTTCGGGGAGTCATGGTTTGGAGGCCATGACCCCGTG GACTTCCAGGTATGTACATGTGGACAAAGAGCTTCACTGTATTGTGTGTT GTGGAATGAAATATGTAAACGATTGTGGTTAGATATGTGTTCCATGGCTA CATATTGGATATTCGCGCTTCACTACTGTGGCATTTAACAAGTTGTGAAA TGGAGGTACTGTTGTTTATCTCTCTGCTCTGGACCGGGCTGATCAGAAAG ATTCTTTCACATGTTAACTTCCACAAACATGTAAGCTGGTTGACGGTTTT TGTTGTATCTGCCTTTGTGTATATATCAGGTGAAGGACGGTCGCTGGGGA AATCTGAAGATCCCTGATGTATCTCCGGAGATGAACAATGATGGGTTGGC AAATGTGTATGGGAAGCTGAGGGCTCCTTGGAACACCAACAATCGCGAGT GAGGACATTCTATGTATTTTGTATCCTTTCAGCATTAAGGTTAAATAGTA GCTTCCTGACCCTTTTTGTTCAATGTGGTATGTGGTATGTTGTACTTTTG ATGGAGAATGCATTTGCTTTATGACCAATATGACCATAGTATAGGTTGAC TGTGATGCCAATGAAAATGTGTGCATCCAGTTTGATACACCAATCCAATA TTCCTTCGTTGTTAGAGATGTCATCTAGCTGTCAAAATTTTCTATTTTTC CTTTTTAGTGTGGAAGTCACACTATTGTTGTTCTTGAAGACATTTTGTTG ATTATTCTATATTTCCTTTTTGTCATCGGTAATAATTGTCTGTTTTCCCT TTTTTGTGTGGAAGCCACACTATTGTTGTTGAAGATATTTTGTTGCTTAT TCTACTTTTGCATTTTGTCCTCTGCAGATACATTACTCGAGGCTTTGGAG AGTTTTGTGGGGGGGATGCAACATCAGCTCAAGCGCTGCCATCGTGTGCT GACCACTACAGCCTCACAACTGACTACAACACCTTTTATGGCTGGTCATG GTATGCTTTGGTTGATCCTCATGGTCCTATCCACCTTTGGATCGGGGGTA TCCTGGACTGTCAGGAAACGTTCAATGATATTGCCAACCTTGTGGGTGTG GAGACAACGATGGATCTGAGAAAGCTTGCCATCACACACAGGAAAACCCT TTACCGTGATGGCTTGCTGTTCTGCAAGGATGACACCCCTCAATATCTCG ACACCTTTGAGGTAATATCACACTGTTCAATCAGAGTCAATGAGTCTTCT GTGTTTTCTTACAGTGGAAATTAGCGTGGTACCCTGTTTTGTCTATGTTC TGCCTTTGCTAAAATTTTGTGATTTGGTGTTTTCTCTTCTTTTTGCTCAG ATAATTATCACTCTGCATAAAAAGCTGTTGTCAGCTGCACTGTTCAGAAA GAAATAAAAATTTAGGGAGCTACTGGTAGTGCATGCTTGTGCTTTCTGAA GCATCCTAATTTTTTGCTAACTCACTTTTGCGGGCGTTTTGATCTGTGCG TCATGGTTGAACAGATCTTTGATCAAGGCTACTGTGGGTGCTTGGACCTA AGCTTTGAAAAAGGCTCAGATGACTATTTGAAAGTTTTGGAGTCGATGGA TATTGATCAAACGTATGTGAGTGCGAAGGACTTCGATGAGGACACCAGAC GTGAAGTGGCGCGCCTAATGTGCAACAGGCCAGTGAATGATGGTGACCAG GTTCAGGCTAGTTCTCCCCTGGATCCCACTTTCTGGCCTACCCATGGTAC CATGGAGAGGCTTATGCAGTACAAGGTACGGTTGAGATGGACACAGGCAC TTGAACAGTTTTCAGAGTAGTGTTCACGACGTAATTTGTTGACCTTGATT TGAGCGGCAAGTTGATGTTGCACTGATTTGATCTGTAACATTTGCCCTAC AAATGCTTGTCACTGTTTGGCACAGCTCCTGACTGGCACTTTGACAGACA CTACCTGGCCGGACCATACTGCAACATACACTGATGAGGATGGAGAGAAG TATGACATTGTTGTAAGCTCTGATGCATCTGGGCAATGTGTGGGACACCG CGGCAGTGATAAGTTTCCCTTTGGATTCAAGGAAACTACTGGTCAAACCC TGCCTGTTACTATCTGGGGAGAAACTGCAATTGACAAGTTCACCAACCGT GAGGTGTTGCGAGCCCTGGATCCTCATGAGAATGCTCTTCCATATGTCTA TGATACATTCACCTGGCCACACTGTGAGAAGATTGGCTATGACTTCCATG ATGCATGGGACACAACTGGGTATGGTGCAGGAGGTGCAGCGGCTGTGTCT GCTGTGAATGGGGAAGGTAAACACGCTCGTCCAAAGACAGGGGTGACACC ACTTGGGAAGACTGGTGATAACTATGCTATTTTCAAAGAAGGGGCTCCAC GACAAGATCCTTGGAGCAGTTTAATGGAGAAAAGGGGTTAGTGTAGATAT GTTATTGACAGAAGTGGTTTGAAACTTAGTTGTATCAATGCGTTTGAAGG CTTGAAATGACTGAGGACGATGACTGATGTCTTGTTCATTGTGTACTTGT TTCTATAGTTGTACGGTGACAAGTCACAAACTTTTGTATTTATTTGTTTG TTTTGCTCACAATTGTGCCTTGTCACTTTGTGAGGCAGAAATTTTTCTTT ATTCATATTGGGGCGAATTGTCTGTATCACATTTTGCACCGCATTGGAAT GGCTCGATGTTGTTGGATATTATTTGTCCACTTGCATGAATTTGATTCAG TATGCAGTAAAATGTTTTGTGTTTCAATGGGTGTGTCTGGTTACAATCTA TATGCTGCGAGTGTATAATGTCCTTATGTGCAGAGGATATGGAGTGGGAT GATGAGCGTGTAGGATACTATCAGTAGCTTTGACATCATCTAAGAAGAGC CTGGGATGGTAGAATGAGATAGGAAGCCCTACAAGATCATACTCAGATGG ATGCAAGCATAACGTGGATGCGTTGTATAGGAAGAGATTTTTTTTGTGTT AGTTTCAACTCGAAAAGCCAGTGAAAAGTTTCAGGAGTTGCACTACTTAA CTAATCATGATTATAAGATATACTGTTGACATCCCTGCATGTACTACATA TTGTTACATGTCAAATAATAAATAATTGCCACTATCCTAGATTGGCAAAG TCATAACTATTTCGTTACTTTATCTGGAGGAAGGGGTGAGTTAGAGCTCT TCCCCTGGTAAAAAGCAAGAACACTAATCGATCATTTTCTAACTTTCCCT CTGGAAAAGAGTAATATCAATGTGCTCC
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig7046:782..5159-

>mRNA_C-tenellus_contig7046.1.2 ID=mRNA_C-tenellus_contig7046.1.2|Name=mRNA_C-tenellus_contig7046.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1794bp|location=Sequence derived from alignment at C-tenellus_contig7046:782..5159- (Choristocarpus tenellus KU2346)
ATGACCTACCAGTGGACCATCACTCCTGCAGCTGAGGGAGCCGAGCCTGT
GACGGCGATGGGAGATGGTGCTGTGGTGATGTTTGAGCATCAGGAGGAAA
ACACTGTGATGGTGGAAGAGCTCAACTCAGATGGGGTGATCGTGAGGCGT
TTCAAGGACGTCGTGATGTGCAAGTATGTTCGCAGGGAGATACGCACTCT
GACCGATGAAGATCGCGAGGAACTCCTAGATGCGATGTACGTCATGTGGG
AGCTGGACACGGTGGAGGGTAGAGAAAAGTACGGTCCTGACTACATGAGT
GTGTGGGACCTGGGATTGCTACATTTCCTTGCCGGTGAAGATGTAGAATG
CGACCATTTCCATCACGGGCTAGGGTTCCTTACAAGTCATGTCCTGATCA
CCAATGTGTTCGAGGTCAGTCTCCAGACGATAAATCCTAGGTTGGCAATG
CCATACTGGGACTTCACGATTGAGACAGCAATTGGATCGGATTCGGACTT
CCAAAGGCTGAGCCCACTGTTCGGGGAGTCATGGTTTGGAGGCCATGACC
CCGTGGACTTCCAGGTGAAGGACGGTCGCTGGGGAAATCTGAAGATCCCT
GATGTATCTCCGGAGATGAACAATGATGGGTTGGCAAATGTGTATGGGAA
GCTGAGGGCTCCTTGGAACACCAACAATCGCGAATACATTACTCGAGGCT
TTGGAGAGTTTTGTGGGGGGGATGCAACATCAGCTCAAGCGCTGCCATCG
TGTGCTGACCACTACAGCCTCACAACTGACTACAACACCTTTTATGGCTG
GTCATGGTATGCTTTGGTTGATCCTCATGGTCCTATCCACCTTTGGATCG
GGGGTATCCTGGACTGTCAGGAAACGTTCAATGATATTGCCAACCTTGTG
GGTGTGGAGACAACGATGGATCTGAGAAAGCTTGCCATCACACACAGGAA
AACCCTTTACCGTGATGGCTTGCTGTTCTGCAAGGATGACACCCCTCAAT
ATCTCGACACCTTTGAGGTAATATCACACTGCTACTGTGGGTGCTTGGAC
CTAAGCTTTGAAAAAGGCTCAGATGACTATTTGAAAGTTTTGGAGTCGAT
GGATATTGATCAAACGTATGTGAGTGCGAAGGACTTCGATGAGGACACCA
GACGTGAAGTGGCGCGCCTAATGTGCAACAGGCCAGTGAATGATGGTGAC
CAGGTTCAGGCTAGTTCTCCCCTGGATCCCACTTTCTGGCCTACCCATGG
TACCATGGAGAGGCTTATGCAGTACAAGCTCCTGACTGGCACTTTGACAG
ACACTACCTGGCCGGACCATACTGCAACATACACTGATGAGGATGGAGAG
AAGTATGACATTGTTGTAAGCTCTGATGCATCTGGGCAATGTGTGGGACA
CCGCGGCAGTGATAAGTTTCCCTTTGGATTCAAGGAAACTACTGGTCAAA
CCCTGCCTGTTACTATCTGGGGAGAAACTGCAATTGACAAGTTCACCAAC
CGTGAGGTGTTGCGAGCCCTGGATCCTCATGAGAATGCTCTTCCATATGT
CTATGATACATTCACCTGGCCACACTGTGAGAAGATTGGCTATGACTTCC
ATGATGCATGGGACACAACTGGGTATGGTGCAGGAGGTGCAGCGGCTGTG
TCTGCTGTGAATGGGGAAGGTAAACACGCTCGTCCAAAGACAGGGGTGAC
ACCACTTGGGAAGACTGGTGATAACTATGCTATTTTCAAAGAAGGGGCTC
CACGACAAGATCCTTGGAGCAGTTTAATGGAGAAAAGGGGTTAG
back to top