mRNA_C-tenellus_contig701.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig701.2.1 vs. uniprot
Match: D7G6D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6D5_ECTSI) HSP 1 Score: 134 bits (337), Expect = 3.810e-38 Identity = 61/120 (50.83%), Postives = 86/120 (71.67%), Query Frame = 1 Query: 1 ISTEILLDVNDMFNLPYGVGDKMKEVSDLLPRARVNDAKEHFIPPVTRPKVPARHYFVFGRPIETSGVEAQDRKGCEDLYQQARSSVEAGIQYLLAARDHDPYASAPRRYLYESVMGVQV 360 +S + +D+ ++F+LP+GVG+KMK+ +D +PRAR D +E+F+PP+ RPKVPARHYFVFG I+TS V+ +DR C+ Y+ +S V GI LL +R DPY +R+LYESVM QV Sbjct: 1 MSVALWMDLEEIFSLPFGVGEKMKDAADAIPRARQGDNQEYFLPPIARPKVPARHYFVFGPAIDTSLVDEKDRGTCQAAYELTKSCVREGISLLLESRKQDPYRDGAKRWLYESVMKTQV 120
BLAST of mRNA_C-tenellus_contig701.2.1 vs. uniprot
Match: A0A7S2XNY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNY5_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.180e-20 Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 4 STEILLDVNDMFNLPYGVGDKMKEVS--DLLPRARVNDAKEHFIPPVTRPKV-PARHYFVFGRPIETSGVEAQDRKGCEDLYQQARSSVEAGIQYLLAARDHDPYASAPRRYLYESVMG 351 S IL+D D+ LP+G+G++ S + R VN+ E F PP PK+ PARHYFVFG+P+ T V +D+ C+D YQ + ++ G +L AR+ DP+ + R +E + G Sbjct: 58 SVNILIDAPDILKLPFGIGERAANSSANTISARFNVNNEGELFQPPFALPKLLPARHYFVFGKPMSTENVNYKDKAACDDFYQNVKGEMQRGFDDVLRAREKDPFKNTASRLRHEVLTG 176
BLAST of mRNA_C-tenellus_contig701.2.1 vs. uniprot
Match: B8BRN2_THAPS (AB hydrolase-1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRN2_THAPS) HSP 1 Score: 94.4 bits (233), Expect = 4.460e-20 Identity = 45/120 (37.50%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 4 STEILLDVNDMFNLPYGVGDKMKEVSDLLPRARVN--DAKEHFIPPVTRPK-VPARHYFVFGRPIETSGVEAQDRKGCEDLYQQARSSVEAGIQYLLAARDHDPYA-SAPRRYLYESVMG 351 S +I+LD ++ +LP+G+GD +K + AR + D +E F+PP+ PK PARHYF+FGR +TS ++ Q++ C+ +Y++ + + + I LLAAR+ DP+A +R Y+ + G Sbjct: 712 SVDIVLDAKELLDLPFGIGDNLKNFNANATSARYDTQDGEELFVPPLAVPKPFPARHYFLFGRAFDTSSIDPQNKDACQTMYEEIENELRSDIDALLAARERDPFALDGGKRAWYQRLFG 831
BLAST of mRNA_C-tenellus_contig701.2.1 vs. uniprot
Match: A0A7S3Q0K0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0K0_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.120e-19 Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 4 STEILLDVNDMFNLPYGVGDKMKEVSDLLPRARVN--DAKEHFIPPVTRPKVPARHYFVFGRPIETSGVEAQDRKGCEDLYQQARSSVEAGIQYLLAARDHDPYASAPRRYLYESVMG 351 S IL+D D+ +LP+G+G++ + + AR + + E F PPV PK+PARHYFVFG+P +T ++ ++ + C LY + + G+ LL AR++DPY P R E V G Sbjct: 615 SLNILVDSPDVLDLPFGIGERAANQTKNVMSARFDQDNTAELFQPPVIFPKIPARHYFVFGKPFDTENIDHRNAEECTKLYAGVKGELRRGLDDLLVARENDPYKDTPMRIAVEKVSG 732
BLAST of mRNA_C-tenellus_contig701.2.1 vs. uniprot
Match: A0A7S4HRM0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HRM0_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.080e-19 Identity = 46/119 (38.66%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 4 STEILLDVNDMFNLPYGVGDKMKEVSDLLPRARVN--DAKEHFIPPVTRPK-VPARHYFVFGRPIETSGVEAQDRKGCEDLYQQARSSVEAGIQYLLAARDHDPYASAPRRYLYESVMG 351 S IL+D D+ LP+G+G++ S + AR + + E F PP PK +PARHYFVFG P++T ++ D++GCE+ Y +S + G +L AR++DP+ RR +E V G Sbjct: 595 SVNILIDAPDILKLPFGIGERAANNSANVMSARFDGDEQSELFQPPFALPKPLPARHYFVFGTPMDTEHLDHSDKEGCENFYDNVKSEMMRGFDDILQARENDPWKDTARRIAFEQVTG 713
BLAST of mRNA_C-tenellus_contig701.2.1 vs. uniprot
Match: A0A446MRL8_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446MRL8_TRITD) HSP 1 Score: 82.4 bits (202), Expect = 1.810e-16 Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 10 EILLDVNDMFNLPYGVGDKMKEVSDLLPRARVN----DAKEHFIPPVTRPKVPARHYFVFGRPIETSGVE--AQDRKGCEDLYQQARSSVEAGIQYLLAARDHDPYASAPRRYLYESVMG 351 EI +D ND N+PY + D +K + LP R D + PV PK+P R YF+FG+PIET G++ D+K DLY +S V + YL R+ DPY S RR LY +++G Sbjct: 157 EIAIDYNDQKNIPY-LRDWIKSFNADLPSVRDTVIGEDGNQVLHLPVVLPKIPGRLYFLFGKPIETKGMDNLLMDKKLANDLYLHTKSEVGNLVSYLKRKREEDPYRSIMRRTLYRAILG 275
BLAST of mRNA_C-tenellus_contig701.2.1 vs. uniprot
Match: A0A8I6W3H4_HORVV (Hydrolase_4 domain-containing protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6W3H4_HORVV) HSP 1 Score: 83.2 bits (204), Expect = 3.570e-16 Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 10 EILLDVNDMFNLPYGVGDKMKEVSDLLPRARVN----DAKEHFIPPVTRPKVPARHYFVFGRPIETSGVE--AQDRKGCEDLYQQARSSVEAGIQYLLAARDHDPYASAPRRYLYESVMG 351 EI+LD ND N+P + D +K ++D LP R + D P PKVP R YF+FG+PIET G++ D+K +LY Q +S VE + YL R+ DP+ S RR LY+ G Sbjct: 556 EIVLDYNDQMNIPC-LRDWIKSLNDDLPSVRDSITGEDGNHALHVPAVLPKVPGRLYFLFGKPIETKGMDNLLLDKKQANELYLQTKSEVENLMSYLKRKREEDPFRSITRRTLYQVTRG 674
BLAST of mRNA_C-tenellus_contig701.2.1 vs. uniprot
Match: UPI001F5C2A1E (phytyl ester synthase 1, chloroplastic-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C2A1E) HSP 1 Score: 82.8 bits (203), Expect = 4.840e-16 Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 10 EILLDVNDMFNLPYGVGDKMKEVSDLLPRARVN----DAKEHFIPPVTRPKVPARHYFVFGRPIETSGVE--AQDRKGCEDLYQQARSSVEAGIQYLLAARDHDPYASAPRRYLYESVMG 351 E++LD ND N+PY + D +K ++ LP R D + P PK+P R YF+FG+PIET G++ +D K DLY +S VE I YL R+ DPY S R LY++ G Sbjct: 521 ELVLDYNDQKNIPY-LRDGIKSFNEDLPNVRATVTGEDGNQALHVPGFLPKLPGRLYFLFGKPIETRGMDNLVRDNKQANDLYLHTKSEVENLISYLKRKREEDPYRSIVSRTLYQATWG 639
BLAST of mRNA_C-tenellus_contig701.2.1 vs. uniprot
Match: A0A7S0RX44_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RX44_9CHLO) HSP 1 Score: 79.7 bits (195), Expect = 4.910e-16 Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 16 LLDVNDMFNLPYGVGDKMKEVSDLLPRARVN-------DAKEHFIPPVTRPKVPARHYFVFGRPIETSGVEAQDRKGCEDLYQQARSSVEAGIQYLLAARDHDPYASAPRRYLY 336 +LD D+ LP +G+ +++ + +P+AR D +E FI P+ P R YFVF PI T+ A DR C+ LY + + V+ G+ YLLAAR+ DPYA RR +Y Sbjct: 89 VLDGRDLAALPI-IGESIRKRASAVPQARRGVSASTSPDLEESFIQPLITLNAPQRFYFVFRAPITTTPDMAGDRAACDALYARVKGEVQGGLDYLLAARERDPYADLGRRLVY 201
BLAST of mRNA_C-tenellus_contig701.2.1 vs. uniprot
Match: UPI001D01FB84 (acyltransferase-like protein At1g54570, chloroplastic n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D01FB84) HSP 1 Score: 82.4 bits (202), Expect = 6.610e-16 Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 10 EILLDVNDMFNLPYGVGDKMKEVSDLLPRARVN----DAKEHFIPPVTRPKVPARHYFVFGRPIETSGVE--AQDRKGCEDLYQQARSSVEAGIQYLLAARDHDPYASAPRRYLYESVMG 351 EI +D ND N+PY + D +K + LP R D + PV PK+P R YF+FG+PIET G++ D+K DLY +S V + YL R+ DPY S RR LY +++G Sbjct: 519 EIAIDYNDQKNIPY-LRDWIKSFNADLPSVRDTVIGEDGNQVLHLPVVLPKIPGRLYFLFGKPIETKGMDNLLMDKKLANDLYLHTKSEVGNLVSYLKRKREEDPYRSIMRRTLYRAILG 637 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig701.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig701.2.1 >prot_C-tenellus_contig701.2.1 ID=prot_C-tenellus_contig701.2.1|Name=mRNA_C-tenellus_contig701.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=120bp ISTEILLDVNDMFNLPYGVGDKMKEVSDLLPRARVNDAKEHFIPPVTRPKback to top mRNA from alignment at C-tenellus_contig701:2976..3653+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig701.2.1 ID=mRNA_C-tenellus_contig701.2.1|Name=mRNA_C-tenellus_contig701.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=678bp|location=Sequence derived from alignment at C-tenellus_contig701:2976..3653+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig701:2976..3653+ >mRNA_C-tenellus_contig701.2.1 ID=mRNA_C-tenellus_contig701.2.1|Name=mRNA_C-tenellus_contig701.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=360bp|location=Sequence derived from alignment at C-tenellus_contig701:2976..3653+ (Choristocarpus tenellus KU2346)back to top |