mRNA_C-tenellus_contig6908.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6908.1.1 vs. uniprot
Match: D7FYK6_ECTSI (Aminodeoxychorismate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYK6_ECTSI) HSP 1 Score: 159 bits (403), Expect = 3.260e-39 Identity = 83/128 (64.84%), Postives = 97/128 (75.78%), Query Frame = 2 Query: 380 LNRADLSE-IKRVTDAT---PGLQSVGRERVVTRGFPIELSLGAPRHRPGTDGFVTSGGVEVTCEVMDVDDAARSVEELVEALDTRKGVLLSSSYEFPGRYARWTLGFVDPPLELSGSGRNFRVRALN 751 LN AD+SE + +V A P + + RGFP LSLGAPRHRPGTDG+ T G VEV+C+VMDV A VE+LV ALD+R+GVLL+SSYEFPGRYARWTLGF DPPLELSG+GR+FRVRALN Sbjct: 6 LNGADVSEDLTQVNGAAAMPPPVAANTARTAQQRGFPATLSLGAPRHRPGTDGYTTKGNVEVSCKVMDVPHAEECVEDLVHALDSRRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALN 133
BLAST of mRNA_C-tenellus_contig6908.1.1 vs. uniprot
Match: A0A835Z6A5_9STRA (Aminodeoxychorismate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A5_9STRA) HSP 1 Score: 142 bits (357), Expect = 4.250e-33 Identity = 66/98 (67.35%), Postives = 79/98 (80.61%), Query Frame = 2 Query: 464 TRGFPIELSLGAPRHRPGTDGFVTSGGVEVTCEVMDVDDAARSVEELVEALDTRKGVLLSSSYEFPGRYARWTLGFVDPPLELSGSGRNFRVRALNAR 757 ++GFP LSLGAPRHRP D + T GGVEVTCEV +V DA VE L+ ALD ++GVLL+SSYEFPGRYARWTLGFV+PP+E++G+G F VRALN R Sbjct: 14 SKGFPAGLSLGAPRHRPAQDSYTTGGGVEVTCEVGEVFDATERVEALISALDDQRGVLLTSSYEFPGRYARWTLGFVNPPIEVAGTGDRFTVRALNER 111
BLAST of mRNA_C-tenellus_contig6908.1.1 vs. uniprot
Match: W7TEM3_9STRA (Aminodeoxychorismate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEM3_9STRA) HSP 1 Score: 129 bits (325), Expect = 7.900e-29 Identity = 58/91 (63.74%), Postives = 75/91 (82.42%), Query Frame = 2 Query: 485 LSLGAPRHRPGTDGFVTSGGVEVTCEVMDVDDAARSVEELVEALDTRKGVLLSSSYEFPGRYARWTLGFVDPPLELSGSGRNFRVRALNAR 757 LSLGAPR+RP + F+T GGV+VTC+V DV D + V+ L+E LD+ +GVLL+SSYEFPGRYARWT+GF+DPPL++ G NF+V+ALNAR Sbjct: 116 LSLGAPRYRPLSGRFITKGGVQVTCQVEDVSDTGKEVDALLEGLDSHEGVLLASSYEFPGRYARWTIGFIDPPLKIESRGLNFKVKALNAR 206
BLAST of mRNA_C-tenellus_contig6908.1.1 vs. uniprot
Match: A0A7S2HFX2_9STRA (Aminodeoxychorismate synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HFX2_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.440e-24 Identity = 58/120 (48.33%), Postives = 83/120 (69.17%), Query Frame = 2 Query: 398 SEIKRVTDATPGLQSVGRERVVTRGFPIELSLGAPRHRPGTDGFVTSGGVEVTCEVMDVDDAARSVEELVEALDTRKGVLLSSSYEFPGRYARWTLGFVDPPLELSGSGRNFRVRALNAR 757 S RVTDA P S V + L+LGAPR RP + ++T G V V+ V D+++ ++E+L++ LD ++G L +SSYEFPGRYARWTLGF++PP+E+SG+GR+F+V+ALN R Sbjct: 47 SATDRVTDAEPLPLSTTYPEVESG----RLTLGAPRDRPRSRKYMTKGSVGVSVAVNDLENPRETIEKLIDTLDMKRGALFTSSYEFPGRYARWTLGFINPPIEISGTGRDFKVKALNER 162
BLAST of mRNA_C-tenellus_contig6908.1.1 vs. uniprot
Match: A0A7S3ZU32_9STRA (Aminodeoxychorismate synthase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZU32_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.230e-22 Identity = 57/96 (59.38%), Postives = 71/96 (73.96%), Query Frame = 2 Query: 476 PIE--LSLGAPRHRPGTDGFVTSGGVEVTCEVMDVDDAARSVEELVEALDTRKGVLLSSSYEFPGRYARWTLGFVDPPLELSGSGRNFRVRALNAR 757 P+E LSLGAPR +P +VT+GGV VT + V+DA + E LV+ALD R+GVL+ SSYEFPGRYARWT+GF DPP+ LSG R+F + ALN R Sbjct: 119 PLESVLSLGAPRFQPPNGTYVTAGGVGVTRQSFTVEDAHGATEALVDALDDRRGVLMHSSYEFPGRYARWTVGFSDPPVLLSGRARDFALSALNDR 214
BLAST of mRNA_C-tenellus_contig6908.1.1 vs. uniprot
Match: A0A7S4MER5_9STRA (Aminodeoxychorismate synthase n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MER5_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.740e-22 Identity = 67/141 (47.52%), Postives = 83/141 (58.87%), Query Frame = 2 Query: 398 SEIKRVTDATPGLQSVGRERVVTRG--------FPIELSLGAP-RHRPGTDGFVTSGGVEVTCEVMDVD------------DAARSVEELVEALDTRKGVLLSSSYEFPGRYARWTLGFVDPPLELSGSGRNFRVRALNAR 757 SE + TP +V + RG F LSLGAP RPG F+T GGV+VT V +V ++A +E+LV+ LDTR+GVLLSSSYEFPGRYARW++GF DPPLE+SG G+ VRALN R Sbjct: 47 SETAPSSSVTPNYNAVHVAKTGGRGSRTAGQAAFESGLSLGAPIALRPGGGHFLTRGGVQVTAHVEEVQHSNKPIVGGEQTNSASMIEDLVDKLDTRRGVLLSSSYEFPGRYARWSVGFTDPPLEISGRGQKCTVRALNKR 187
BLAST of mRNA_C-tenellus_contig6908.1.1 vs. uniprot
Match: A0A7R9WEH9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WEH9_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.920e-22 Identity = 60/113 (53.10%), Postives = 73/113 (64.60%), Query Frame = 2 Query: 485 LSLGAPRHRPGTDGFVTSGGVEVTCEVMDV--------------DD--------AARSVEELVEALDTRKGVLLSSSYEFPGRYARWTLGFVDPPLELSGSGRNFRVRALNAR 757 LSLGAPR +P F+T GGV+VT V V DD +A VE+LV+ LDTR+GVLL+SSYEFPGRYARW+LGFVDPPLE++G G+ +RALN R Sbjct: 109 LSLGAPRSQPSGGHFLTKGGVQVTAHVETVPFGTKAAASSEEAKDDKVGKSIRNSASRVEDLVDMLDTRRGVLLTSSYEFPGRYARWSLGFVDPPLEIAGRGQKCTIRALNER 221
BLAST of mRNA_C-tenellus_contig6908.1.1 vs. uniprot
Match: A0A7S2XWD8_9STRA (Aminodeoxychorismate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWD8_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.170e-22 Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = 2 Query: 485 LSLGAPRHRPGTDGFVTSGGVEV-TC-EVMDVDDAARSVEELVEALDTRKGVLLSSSYEFPGRYARWTLGFVDPPLELSGSGRNFRVRALNAR 757 L+LGAPR++P T +VT GGVEV C E +D +A V +L + LD KGVLLSSSY FPGRYARW+LGF PPLE+ GSGR+FR++ LN R Sbjct: 73 LTLGAPRYQPDTGSYVTDGGVEVDVCSEELDYLEAQTMVRQLAQTLDDHKGVLLSSSYIFPGRYARWSLGFAKPPLEVVGSGRDFRIKVLNQR 165
BLAST of mRNA_C-tenellus_contig6908.1.1 vs. uniprot
Match: A0A7S2R582_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R582_9STRA) HSP 1 Score: 108 bits (269), Expect = 6.100e-22 Identity = 66/162 (40.74%), Postives = 95/162 (58.64%), Query Frame = 2 Query: 338 TARARRAVNSSP--LQLNRADLSEIKRVTDATPGLQSVGRERVVTRG--------FPIELSLGAPRHRPGTDGFVTSGGVEVTCEVMDVD------------DAARSVEELVEALDTRKGVLLSSSYEFPGRYARWTLGFVDPPLELSGSGRNFRVRALNAR 757 TA ++ A +S+P +Q ++ LS + T + P SV + RG +LSLGAP+ RP F+T GGV++T V ++ +A ++E+LV+ LD RKGVL +SSYE+PGRY RW+LGFVDPPLE+SG G+ + ALN+R Sbjct: 23 TALSKHAYSSTPFLVQSSKTALSMVS--TSSPPDYNSVHVAKTGGRGAISSSQDALNKDLSLGAPKDRPIGGHFLTRGGVQITANVKALNFVRQGTKDAAEGSSAHAIEQLVDKLDNRKGVLFASSYEYPGRYGRWSLGFVDPPLEVSGKGQQCTITALNSR 182
BLAST of mRNA_C-tenellus_contig6908.1.1 vs. uniprot
Match: A0A7S1YQY3_9STRA (Aminodeoxychorismate synthase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YQY3_9STRA) HSP 1 Score: 108 bits (271), Expect = 7.510e-22 Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 485 LSLGAPRHRPGTDGFVTSGGVEVTCEVMDV------------DDAARSVEELVEALDTRKGVLLSSSYEFPGRYARWTLGFVDPPLELSGSGRNFRVRALNAR 757 LSLGAP+ RP ++T GGV+VT +V + + +VE+LVE LD+++GVLL+SSYEFPGRYARW+LGFVDPPLE+SG+G+ +RALN R Sbjct: 65 LSLGAPQKRPSGGHYLTRGGVQVTADVKSLRFSSNKDSINVPGTSLHAVEQLVEKLDSQRGVLLTSSYEFPGRYARWSLGFVDPPLEISGTGQKCTIRALNDR 167 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6908.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6908.1.1 >prot_C-tenellus_contig6908.1.1 ID=prot_C-tenellus_contig6908.1.1|Name=mRNA_C-tenellus_contig6908.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=197bp MVRSLAVALVVVTYFWTPPAYAFVPVRISLPGSRQLLPGDSLEALSKVARback to top mRNA from alignment at C-tenellus_contig6908:2..2314- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6908.1.1 ID=mRNA_C-tenellus_contig6908.1.1|Name=mRNA_C-tenellus_contig6908.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2313bp|location=Sequence derived from alignment at C-tenellus_contig6908:2..2314- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6908:2..2314- >mRNA_C-tenellus_contig6908.1.1 ID=mRNA_C-tenellus_contig6908.1.1|Name=mRNA_C-tenellus_contig6908.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=591bp|location=Sequence derived from alignment at C-tenellus_contig6908:2..2314- (Choristocarpus tenellus KU2346)back to top |