mRNA_C-tenellus_contig6832.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6832.1.1 vs. uniprot
Match: F0XYB4_AURAN (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYB4_AURAN) HSP 1 Score: 119 bits (299), Expect = 2.010e-28 Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 238 EALKGKRLLGLYFSARWCAPCRNFTPVLASFYASCLKKADDSIQIVFVSSDQNEEVFKEYLGKMPWLAVPFEEQTARAKLSELCKVQGIPTLVVMDGETGAIKSFTGR 561 + L GK ++GLYFSA WC PCR FTP LA+ Y + L A +S ++VFVSSD+++ F EY G PW AVPF + A+A LS KVQGIPT V++DGETG + + GR Sbjct: 2 QVLGGKAVVGLYFSAHWCPPCRGFTPKLAALYEA-LVAAGESFEVVFVSSDRDDAQFDEYYGAHPWAAVPFANRDAKAALSRKFKVQGIPTFVLVDGETGELITADGR 108
BLAST of mRNA_C-tenellus_contig6832.1.1 vs. uniprot
Match: A0A6T0B168_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6T0B168_CHRCT) HSP 1 Score: 128 bits (321), Expect = 2.960e-28 Identity = 65/120 (54.17%), Postives = 87/120 (72.50%), Query Frame = 1 Query: 232 THEALKGKRLLGLYFSARWCAPCRNFTPVLASFYASCLKKADDSIQIVFVSSDQNEEVFKEYLGKMPWLAVPFEEQTARAKLSELCKVQGIPTLVVMDGETGAIKSFTGRQDVVADTDAV 591 T +ALKGK ++GLYFSA WC PCR FTP L Y +K A + +IVFVSSD+++ F EY G+MPWLAVPF ++ A+A+LS+ KVQGIPTLV++D E+GAI + GR+ V D + + Sbjct: 19 TDDALKGK-IVGLYFSAHWCPPCRGFTPALVETYKK-IKTAGKAFEIVFVSSDKDQGAFDEYFGEMPWLAVPFSDREAKARLSKKYKVQGIPTLVILD-ESGAIITADGREAVSEDLEGL 135
BLAST of mRNA_C-tenellus_contig6832.1.1 vs. uniprot
Match: A0A7S2UV75_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV75_9STRA) HSP 1 Score: 120 bits (302), Expect = 4.870e-28 Identity = 62/128 (48.44%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 232 THEALKGKRLLGLYFSARWCAPCRNFTPVLASFYASCLKKAD--DSIQIVFVSSDQNEEVFKEYLGKMPWLAVPFEEQTARAKLSELCKVQGIPTLVVMDGETGAIKSFTGRQDVVADTDAVRVLNKW 609 T L+GK+L+ +YFSA WC PCRNFTP LA F S +K A D I+IVF SSDQ E+ F+EY MPW+A+ + + R L +V+GIPTLVV+DGETG +K+ GR V + +L++W Sbjct: 27 TKAVLQGKKLVLIYFSAHWCPPCRNFTPKLAEFIKS-IKNAGRGDDIEIVFCSSDQVEQQFQEYFESMPWVAIEYSNTSVREALGSKFQVRGIPTLVVLDGETGGLKTKDGRAQV-GQGNPFNILDQW 152
BLAST of mRNA_C-tenellus_contig6832.1.1 vs. uniprot
Match: A0A7S0E2L2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E2L2_9EUKA) HSP 1 Score: 127 bits (319), Expect = 5.610e-28 Identity = 63/116 (54.31%), Postives = 79/116 (68.10%), Query Frame = 1 Query: 232 THEALKGKRLLGLYFSARWCAPCRNFTPVLASFYASCLKKADDSIQIVFVSSDQNEEVFKEYLGKMPWLAVPFEEQTARAKLSELCKVQGIPTLVVMDGETGAIKSFTGRQDVVAD 579 T EALKGK+ + LYFSA WC PCR FTP LA Y L A S +IVFVSSD+ E F EY G+ PWLA+P+ E+ +A LS+ KV GIP+LV++DGETG + + GR V+ D Sbjct: 20 TAEALKGKQAVALYFSAHWCPPCRGFTPKLAEAYKGLLA-AGKSFEIVFVSSDREESAFDEYYGEQPWLALPYAERKLKAALSKQFKVSGIPSLVILDGETGELITKDGRDAVMED 134
BLAST of mRNA_C-tenellus_contig6832.1.1 vs. uniprot
Match: A0A835VQM9_9CHLO (Uncharacterized protein n=3 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835VQM9_9CHLO) HSP 1 Score: 128 bits (321), Expect = 7.010e-28 Identity = 59/110 (53.64%), Postives = 84/110 (76.36%), Query Frame = 1 Query: 256 RLLGLYFSARWCAPCRNFTPVLASFYASCLKK--ADDSIQIVFVSSDQNEEVFKEYLGKMPWLAVPFEEQTARAKLSELCKVQGIPTLVVMDGETGAIKSFTGRQDVVAD 579 +++ LYFSA WC PCR+FTP LAS Y + K D ++VFVSSD++EE FKEY G+MPW A+P++++ A+A+LS+L KV+GIPTLV++DGETG + + +GR V +D Sbjct: 62 KVIALYFSAHWCPPCRHFTPQLASIYTNFKKDHVRKDDWEVVFVSSDRDEESFKEYFGEMPWAALPYDKREAKAQLSKLYKVRGIPTLVILDGETGEVITTSGRDAVSSD 171
BLAST of mRNA_C-tenellus_contig6832.1.1 vs. uniprot
Match: A0A7S0P4E7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P4E7_9EUKA) HSP 1 Score: 119 bits (299), Expect = 1.650e-27 Identity = 56/116 (48.28%), Postives = 79/116 (68.10%), Query Frame = 1 Query: 238 EALKGKRLLGLYFSARWCAPCRNFTPVLASFYASCLKKADDSIQIVFVSSDQNEEVFKEYLGKMPWLAVPFEEQTARAKLSELCKVQGIPTLVVMDGETGAIKSFTGRQDVVADTD 585 AL GK ++GLYFSA WC PC+ +TP LA Y + + A S +++FVSSD++E FKEY G+MPWLA+P+ + +A LS+ KV GIPTL+++DG TG + + GR V+ D Sbjct: 23 SALAGKEIVGLYFSAHWCPPCKGYTPKLAEQYKA-VAAAGKSFEVIFVSSDRDEASFKEYFGEMPWLALPYAARKTKAALSKKYKVNGIPTLILLDGATGELLNKDGRSAVMEIAD 137
BLAST of mRNA_C-tenellus_contig6832.1.1 vs. uniprot
Match: K1QE20_CRAGI (Nucleoredoxin n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1QE20_CRAGI) HSP 1 Score: 117 bits (294), Expect = 2.720e-27 Identity = 57/108 (52.78%), Postives = 76/108 (70.37%), Query Frame = 1 Query: 238 EALKGKRLLGLYFSARWCAPCRNFTPVLASFYASCLKKADDSIQIVFVSSDQNEEVFKEYLGKMPWLAVPFEEQTARAKLSELCKVQGIPTLVVMDGETGAIKSFTGR 561 + ++GK +GLYFSA WC PCR FTPVLA Y LK+ + SI+I+FVSSD++E FKEY +MPW A+PF E+ +AKL E V+GIPTL+++D + G IK R Sbjct: 22 DLVQGKTCVGLYFSAHWCPPCRGFTPVLAQLYTK-LKENNQSIEIIFVSSDRDENSFKEYFNEMPWHALPFSERDLKAKLGEKYGVRGIPTLIILDKD-GNIKDAEAR 127
BLAST of mRNA_C-tenellus_contig6832.1.1 vs. uniprot
Match: T1ELK9_HELRO (Thioredoxin domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1ELK9_HELRO) HSP 1 Score: 117 bits (292), Expect = 5.540e-27 Identity = 51/113 (45.13%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 232 THEALKGKRLLGLYFSARWCAPCRNFTPVLASFYASCLKKADDSIQIVFVSSDQNEEVFKEYLGKMPWLAVPFEEQTARAKLSELCKVQGIPTLVVMDGETGAIKSFTGRQDV 570 T ++ +++GLYFSA WC PCR FTP+L +FY + K+ + ++I+F+SSDQ+ ++EY +MPW+A+P+E++ + KLS+ V+GIPTL+ +D ETG I S GR+ V Sbjct: 22 TSSVVESSKVIGLYFSAHWCPPCRMFTPMLKTFYNTY--KSSEKLEIIFISSDQDVTQWQEYFSEMPWIALPYEDRAMKEKLSKTFDVRGIPTLIFLDAETGDIISLNGREVV 132
BLAST of mRNA_C-tenellus_contig6832.1.1 vs. uniprot
Match: A0A813H0J6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H0J6_POLGL) HSP 1 Score: 123 bits (309), Expect = 2.720e-26 Identity = 62/133 (46.62%), Postives = 86/133 (64.66%), Query Frame = 1 Query: 181 LRHAQPGKPFPVISN*VTHEALKGKRLLGLYFSARWCAPCRNFTPVLASFYASCLKKADDSIQIVFVSSDQNEEVFKEYLGKMPWLAVPFEEQTARAKLSELCKVQGIPTLVVMDGETGAIKSFTGRQDVVAD 579 L H+ PG T EAL GK + LYFSA WC PCR FTP LA +Y LK D +++VF+SSD++E+ F +Y+G+MPWLA+PF ++ + LS+ KVQGIPT+V++DG TG + + GR + D Sbjct: 12 LVHSGPGGEV------ATSEALAGKPAVALYFSAHWCPPCRGFTPNLAEWYRESLK--DKGLEVVFISSDKDEDAFNQYVGEMPWLALPFSDRERKETLSKKYKVQGIPTVVILDG-TGQVITKDGRTAISGD 135
BLAST of mRNA_C-tenellus_contig6832.1.1 vs. uniprot
Match: A0A8B6CUJ4_MYTGA (Nucleoredoxin n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6CUJ4_MYTGA) HSP 1 Score: 115 bits (287), Expect = 2.720e-26 Identity = 59/122 (48.36%), Postives = 80/122 (65.57%), Query Frame = 1 Query: 220 SN*VTHEALKGK-RLLGLYFSARWCAPCRNFTPVLASFYASCLKKADDSIQIVFVSSDQNEEVFKEYLGKMPWLAVPFEEQTARAKLSELCKVQGIPTLVVMDGETGAIKSFTGRQDVVADT 582 SN V+ E+ G +++GLYFSA WC PCR+FTP LA Y K+ S +IVFVSSD++E F Y +MPWLA+PF E+ + KL V+GIP LV+++GETG + S GR D ++T Sbjct: 19 SNFVSTESFTGSGKVVGLYFSAHWCPPCRSFTPELARKYTK-YKQQYPSFEIVFVSSDRSENDFDSYFSEMPWLALPFNEEGKKNKLMAQFGVRGIPALVILNGETGKVISKDGRADTASET 139 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6832.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6832.1.1 >prot_C-tenellus_contig6832.1.1 ID=prot_C-tenellus_contig6832.1.1|Name=mRNA_C-tenellus_contig6832.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=115bp MPWLAVPFEEQTARAKLSELCKVQGIPTLVVMDGETGAIKSFTGRQDVVAback to top mRNA from alignment at C-tenellus_contig6832:304..3541+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6832.1.1 ID=mRNA_C-tenellus_contig6832.1.1|Name=mRNA_C-tenellus_contig6832.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3238bp|location=Sequence derived from alignment at C-tenellus_contig6832:304..3541+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6832:304..3541+ >mRNA_C-tenellus_contig6832.1.1 ID=mRNA_C-tenellus_contig6832.1.1|Name=mRNA_C-tenellus_contig6832.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=345bp|location=Sequence derived from alignment at C-tenellus_contig6832:304..3541+ (Choristocarpus tenellus KU2346)back to top |