mRNA_C-tenellus_contig6822.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6822.1.1 vs. uniprot
Match: D8LCD7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCD7_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 4.460e-22 Identity = 64/126 (50.79%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 1 MKFWSVVLVALLGLVSSTEGFVLAP--TQAFVRPVVGRATMSLSALPASQVVT--------ALHSSVL----AVSATVEPGTVNAPGWVLPLGAVLVILTAGAIPLLLKPGDDAAREMQDRDSDLW 336 MK +S A+L L S+ +GFV+AP ++A V + T +S LPA+ L SSV+ A EPGTV+APGWVLP GAV VILTAG IPLLLKPGDDAAR+MQ+RD LW Sbjct: 1 MKLFSTT-TAVLCLASAADGFVVAPPSSRASVAAPGRQCTRMVSPLPAAXXXXXXXXXXXXVLQSSVVPLIAAAGGVAEPGTVDAPGWVLPAGAVAVILTAGLIPLLLKPGDDAARDMQERDEGLW 125
BLAST of mRNA_C-tenellus_contig6822.1.1 vs. uniprot
Match: A0A835YTE3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTE3_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.940e-14 Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 91 RPVVGRATMSLSALPASQVVTALHSSVLAVSATVEP---GTVNAPGWVLPLGAVLVILTAGAIPLLLKPGDDAAREMQDRDSDLWGK 342 RPV RA + + + + L + + AV+ + G+V APGWVLP+GA++V+ TA IP+LLKPGDDAAR+MQ RD DLW K Sbjct: 26 RPVQSRAAGTNTRMLPMGTIAELSNIITAVADEADDLNYGSVAAPGWVLPVGALVVVATA-LIPILLKPGDDAARDMQQRDKDLWDK 111
BLAST of mRNA_C-tenellus_contig6822.1.1 vs. uniprot
Match: A0A7R9UEM1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEM1_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 7.480e-13 Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 1 Query: 199 GTVNAPGWVLPLGAVLVILTAGAIPLLLKPGDDAAREMQDRDSDLWGK 342 GTV APGWVLP+ A+L I A+P+LL+PGDDAAREMQ+RD+ +GK Sbjct: 49 GTVEAPGWVLPVVALLTISLTAAVPILLQPGDDAAREMQERDASFYGK 96
BLAST of mRNA_C-tenellus_contig6822.1.1 vs. uniprot
Match: A0A7R9YFB9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFB9_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.530e-12 Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 1 Query: 199 GTVNAPGWVLPLGAVLVILTAGAIPLLLKPGDDAAREMQDRDSDLWGK 342 GTV APGWVLP+ A+L I A+P+LL+PGDDAAREMQ+RD+ +GK Sbjct: 79 GTVEAPGWVLPVVALLTISLTAAVPILLQPGDDAAREMQERDASFYGK 126
BLAST of mRNA_C-tenellus_contig6822.1.1 vs. uniprot
Match: A0A8J5Y1Y5_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y1Y5_DIALT) HSP 1 Score: 61.2 bits (147), Expect = 9.750e-10 Identity = 31/50 (62.00%), Postives = 41/50 (82.00%), Query Frame = 1 Query: 193 EPGTVNAPGWVLPLGAVLVILTAGAIPLLLKPGDDAAREMQDRDSDLWGK 342 E G+V+AP ++LPLGA L ILTA +P+ L+ GDDAAREMQ+RD+D +GK Sbjct: 58 EYGSVSAPDFILPLGAGLAILTA-LLPIALRSGDDAAREMQERDADTFGK 106
BLAST of mRNA_C-tenellus_contig6822.1.1 vs. uniprot
Match: A0A7S3NHI6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NHI6_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 5.030e-9 Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = 1 Query: 193 EPGTVNAPGWVLPLGAVLVILTAGAIPLLLKPGDDAAREMQDRDSDLWGK 342 E G V+APGWVLPLGA I TA +PL L+ GDDA REM +RD D +GK Sbjct: 88 EYGAVSAPGWVLPLGAFFAIATA-LLPLALRAGDDAQREMAERDVDSFGK 136
BLAST of mRNA_C-tenellus_contig6822.1.1 vs. uniprot
Match: A0A7S2FK54_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FK54_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 1.230e-6 Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 19 VLVALLGLVSSTEGFVLAPTQAFVRPVVGRATMSLSALPASQVVTALHSSVLAVSAT--VEPGTVNAPGWVLPLGAVLVILTAGAIPLLLKPGDDAAREMQ 315 VLVAL L++S F +P A T + ++ ++V + ++ A +A+ E G VNAPGWVLP+GA+ VILTA A+P+LL PG++A + + Sbjct: 16 VLVALGFLLASASAFTTSPRWAGHARARAVKTNAAPSMDMAEVFANVPQAIAAAAASDGYEYGAVNAPGWVLPVGALAVILTA-AVPVLLSPGEEALEQQR 115
BLAST of mRNA_C-tenellus_contig6822.1.1 vs. uniprot
Match: A0A7S2SMI4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMI4_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 1.560e-6 Identity = 23/48 (47.92%), Postives = 39/48 (81.25%), Query Frame = 1 Query: 190 VEPGTVNAPGWVLPLGAVLVILTAGAIPLLLKPGDDAAREMQDRDSDL 333 ++ G+V AP WVLP+GA+ I+TA A+P+LL+PG++A +M++++ DL Sbjct: 57 IKYGSVQAPSWVLPVGALFTIITA-AVPILLRPGEEALDKMREQEEDL 103
BLAST of mRNA_C-tenellus_contig6822.1.1 vs. uniprot
Match: W7T3F8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3F8_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 4.340e-6 Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 1 Query: 166 SVLAVSATVEPGTVNAPGWVLPLGAVLVILTAGAIPLLLKPGDDAAREMQDR 321 SV A + E G V APGWVLP+GA+L + A AIPL L+PG +A E +DR Sbjct: 61 SVAAAADEYEYGAVAAPGWVLPVGALLTLGLAVAIPLALRPGTEAFEEERDR 112
BLAST of mRNA_C-tenellus_contig6822.1.1 vs. uniprot
Match: A0A7S3TII5_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TII5_9SPIT) HSP 1 Score: 51.6 bits (122), Expect = 5.760e-6 Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 13 SVVLVALLGLVSSTEGFVLAPT-QAFVRPVVGRATMSLSALPASQVVTALHSSVLAVSATVEPGTVNAPGWVLPLGAVLVILTAGAIPLLLKPGDDAAREMQDRDSDLWG 339 S + +ALLGL+ V++P +A V P A ++L +P+ L S ++ G V+APGWVLP+GA++VI T+ +P+LL PG++A +M+ + +G Sbjct: 8 SPIFLALLGLLHGASALVMSPAVRAPVVPARCAAPVALD-MPSIYQAATLLSEIVDADGERAYGAVDAPGWVLPVGAIVVIGTS-LLPILLSPGEEALNKMRKDEQGRFG 115 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6822.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6822.1.1 >prot_C-tenellus_contig6822.1.1 ID=prot_C-tenellus_contig6822.1.1|Name=mRNA_C-tenellus_contig6822.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=115bp MKFWSVVLVALLGLVSSTEGFVLAPTQAFVRPVVGRATMSLSALPASQVVback to top mRNA from alignment at C-tenellus_contig6822:216..560+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6822.1.1 ID=mRNA_C-tenellus_contig6822.1.1|Name=mRNA_C-tenellus_contig6822.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=345bp|location=Sequence derived from alignment at C-tenellus_contig6822:216..560+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6822:216..560+ >mRNA_C-tenellus_contig6822.1.1 ID=mRNA_C-tenellus_contig6822.1.1|Name=mRNA_C-tenellus_contig6822.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=345bp|location=Sequence derived from alignment at C-tenellus_contig6822:216..560+ (Choristocarpus tenellus KU2346)back to top |