mRNA_C-tenellus_contig6781.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6781.1.1 vs. uniprot
Match: A0A6H5JDG1_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDG1_9PHAE) HSP 1 Score: 166 bits (419), Expect = 8.210e-43 Identity = 82/113 (72.57%), Postives = 94/113 (83.19%), Query Frame = 2 Query: 299 LEKQLRLFWDMSVPFFK----EDDSSKWLLGGVVALTLLNSGVSVAFSYIGRDFWTALSNKDPEQFNIMLQRFLGALAAGVPVTVFYRYQREKLALAWREWMTNRVMQVGMKG 625 L Q+ LF +MS PFFK E++ ++WLL VVALTLLNSGVSVAFSYIGRDFWTALSNKDP QFNIMLQRFL AL AGVPVTVFYR++R+KLAL+WREWMT RVM++ G Sbjct: 144 LNTQIGLFVEMSTPFFKASCREENGARWLLATVVALTLLNSGVSVAFSYIGRDFWTALSNKDPAQFNIMLQRFLLALIAGVPVTVFYRFERQKLALSWREWMTKRVMEIYYSG 256
BLAST of mRNA_C-tenellus_contig6781.1.1 vs. uniprot
Match: A0A835ZDB9_9STRA (Putative ABC transporter Nda n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDB9_9STRA) HSP 1 Score: 158 bits (400), Expect = 8.050e-41 Identity = 79/104 (75.96%), Postives = 87/104 (83.65%), Query Frame = 2 Query: 329 MSVPFFKEDDSSKWLLGGVVALTLLNSGVSVAFSYIGRDFWTALSNKDPEQFNIMLQ-----RFLGALAAGVPVTVFYRYQREKLALAWREWMTNRVMQVGMKG 625 MS+PFFKE+ S+K LL GV+ LTL NSGVSVAFSYIGRDFWTALS KDPEQFNIML+ RF+GAL AGVPVTVFYR+QREKLALAWREWMT RVM + G Sbjct: 1 MSLPFFKEERSAKLLLAGVIGLTLANSGVSVAFSYIGRDFWTALSQKDPEQFNIMLEASPPARFMGALVAGVPVTVFYRFQREKLALAWREWMTLRVMDIYYAG 104
BLAST of mRNA_C-tenellus_contig6781.1.1 vs. uniprot
Match: A0A6V1QMT5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QMT5_HETAK) HSP 1 Score: 154 bits (388), Expect = 8.570e-39 Identity = 71/107 (66.36%), Postives = 91/107 (85.05%), Query Frame = 2 Query: 299 LEKQLRLFWDMSVPFFKEDD--SSKWLLGGVVALTLLNSGVSVAFSYIGRDFWTALSNKDPEQFNIMLQRFLGALAAGVPVTVFYRYQREKLALAWREWMTNRVMQV 613 L++Q LFW+M+ PFF+++D + + LL GV+ LTLLNSGVSVAFSYIGRDFWTALSNK+PE+F +MLQ+F+ AL AGVPVTV Y++QR+KLAL WREWMT R+M + Sbjct: 81 LKEQAGLFWNMAAPFFRDEDDKTGRNLLVGVIGLTLLNSGVSVAFSYIGRDFWTALSNKNPEEFYLMLQKFMAALVAGVPVTVSYKFQRDKLALGWREWMTRRIMAI 187
BLAST of mRNA_C-tenellus_contig6781.1.1 vs. uniprot
Match: A0A7S1TYC6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYC6_9STRA) HSP 1 Score: 145 bits (367), Expect = 8.470e-36 Identity = 71/119 (59.66%), Postives = 92/119 (77.31%), Query Frame = 2 Query: 299 LEKQLRLFWDMSVPFFKEDDSSKWLLGGVVALTLLNSGVSVAFSYIGRDFWTALSNKDPEQFNIMLQRFLGALAAGVPVTVFYRYQREKLALAWREWMTNRVMQ--VGMKGIADAFVVG 649 ++++L FW +S P+F E+ +KWLLGGV+ALTLLNSGVSVAFSY+ RDFWTAL+ K+ + F +L +F GALAAGVPV+VFY YQRE+LAL+WR WMT RV+ VG G A+ +G Sbjct: 91 VQEKLGSFWRLSKPYFVEEADAKWLLGGVIALTLLNSGVSVAFSYLSRDFWTALNGKNVDDFQQVLLKFGGALAAGVPVSVFYTYQRERLALSWRRWMTERVLTLYVGGGGGAETGYLG 209
BLAST of mRNA_C-tenellus_contig6781.1.1 vs. uniprot
Match: A0A7R9U3H2_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3H2_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.580e-35 Identity = 67/110 (60.91%), Postives = 84/110 (76.36%), Query Frame = 2 Query: 296 GLEKQLRLFWDMSVPFFKEDDSSKWLLGGVVALTLLNSGVSVAFSYIGRDFWTALSNKDPEQFNIMLQRFLGALAAGVPVTVFYRYQREKLALAWREWMTNRVMQVGMKG 625 G+ + + FW +S P+F E+ S+KWLLGGVVALTLLNSGVSVAFSY+ RDFWTAL+ K E F +L +F ALA GVP+TV+Y YQRE+LAL WR WMT RV+ + + G Sbjct: 101 GVSAKFKSFWQLSKPYFIEEPSAKWLLGGVVALTLLNSGVSVAFSYLSRDFWTALNAKSAEDFQQVLLKFSAALAIGVPITVYYAYQRERLALQWRSWMTQRVLTLYVGG 210
BLAST of mRNA_C-tenellus_contig6781.1.1 vs. uniprot
Match: A0A6T6UCM3_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6UCM3_9EUKA) HSP 1 Score: 143 bits (360), Expect = 7.920e-35 Identity = 64/103 (62.14%), Postives = 85/103 (82.52%), Query Frame = 2 Query: 299 LEKQLRLFWDMSVPFFKEDDSSKWLLGGVVALTLLNSGVSVAFSYIGRDFWTALSNKDPEQFNIMLQRFLGALAAGVPVTVFYRYQREKLALAWREWMTNRVM 607 +++QLRLFW+MS+P+FKED+ +K +L V+ LTLL SGVSV FS++GRDFW+AL+ +D F ++ RF AL AGVPV+VFYR+QREKL+L WREWMTNRV+ Sbjct: 117 VKEQLRLFWEMSIPYFKEDNGAKVMLATVIGLTLLQSGVSVVFSFVGRDFWSALNTRDVSGFGTVVSRFGVALLAGVPVSVFYRFQREKLSLKWREWMTNRVL 219
BLAST of mRNA_C-tenellus_contig6781.1.1 vs. uniprot
Match: A0A7S3PYB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYB7_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.050e-34 Identity = 62/117 (52.99%), Postives = 88/117 (75.21%), Query Frame = 2 Query: 263 NEPVSLSGKYFGLEKQLRLFWDMSVPFFKEDDSSKWLLGGVVALTLLNSGVSVAFSYIGRDFWTALSNKDPEQFNIMLQRFLGALAAGVPVTVFYRYQREKLALAWREWMTNRVMQV 613 +E SG L+ + F++M++P++KE + +WL G++ +TLLNSGVSVAFSY+G+DFW AL++KD EQF IML R+ GAL G PV+V Y YQRE+LA++WREWMT+R +Q+ Sbjct: 124 DEDAGESGAELNLQDKFAAFFEMALPYYKESTAGRWLFAGMIGITLLNSGVSVAFSYVGKDFWNALNSKDTEQFYIMLWRYAGALLVGSPVSVLYAYQRERLAVSWREWMTDRCLQL 240
BLAST of mRNA_C-tenellus_contig6781.1.1 vs. uniprot
Match: A0A7S2GWG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GWG8_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.700e-34 Identity = 63/103 (61.17%), Postives = 81/103 (78.64%), Query Frame = 2 Query: 299 LEKQLRLFWDMSVPFFKEDDSSKWLLGGVVALTLLNSGVSVAFSYIGRDFWTALSNKDPEQFNIMLQRFLGALAAGVPVTVFYRYQREKLALAWREWMTNRVM 607 +++Q R+F ++S P+F ED +KWLLGGVV LTL NSGVSVAFSY+ RDFW+AL+ KD E F +L +F GALA GVPV V ++QRE LAL+WREWMT R++ Sbjct: 75 IQEQFRMFLELSKPYFLEDPQAKWLLGGVVLLTLANSGVSVAFSYLSRDFWSALNAKDTETFQQVLVKFGGALALGVPVVVLSQFQRETLALSWREWMTERML 177
BLAST of mRNA_C-tenellus_contig6781.1.1 vs. uniprot
Match: A0A7S0FM94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FM94_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.080e-33 Identity = 53/96 (55.21%), Postives = 76/96 (79.17%), Query Frame = 2 Query: 320 FWDMSVPFFKEDDSSKWLLGGVVALTLLNSGVSVAFSYIGRDFWTALSNKDPEQFNIMLQRFLGALAAGVPVTVFYRYQREKLALAWREWMTNRVM 607 F +M++P+++E + +WL G++ +TLLNSGVSVAFSY+G+DFW ALS+KD F ML ++ AL G+PV+V YR+QRE+LA+AWREWMT+R + Sbjct: 11 FKEMALPYYQESQAGRWLFAGMIGITLLNSGVSVAFSYVGKDFWNALSSKDAANFYPMLAKYAAALVVGMPVSVLYRFQRERLAVAWREWMTDRTL 106
BLAST of mRNA_C-tenellus_contig6781.1.1 vs. uniprot
Match: A0A7S2U7G0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7G0_9STRA) HSP 1 Score: 139 bits (349), Expect = 2.020e-33 Identity = 60/103 (58.25%), Postives = 84/103 (81.55%), Query Frame = 2 Query: 305 KQLRLFWDMSVPFFKEDDSSKWLLGGVVALTLLNSGVSVAFSYIGRDFWTALSNKDPEQFNIMLQRFLGALAAGVPVTVFYRYQREKLALAWREWMTNRVMQV 613 +QL+ F +M++P+++E D+ +WL G+V +TLLNSGVSVAFSYIG+DFW+AL +KD +QF ML +F GAL G PV+V YR+QRE+LA+ WREWMT+R +Q+ Sbjct: 89 QQLKAFREMALPYYEESDAGRWLFAGMVGMTLLNSGVSVAFSYIGKDFWSALGSKDADQFYAMLVKFGGALVVGAPVSVLYRFQREQLAVHWREWMTDRTLQL 191 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6781.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6781.1.1 >prot_C-tenellus_contig6781.1.1 ID=prot_C-tenellus_contig6781.1.1|Name=mRNA_C-tenellus_contig6781.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=211bp MPKALVRSTFPNHLFLAPGSRLARESNPLPNRSEILCFEPSLHCRCRSRSback to top mRNA from alignment at C-tenellus_contig6781:180..2757- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6781.1.1 ID=mRNA_C-tenellus_contig6781.1.1|Name=mRNA_C-tenellus_contig6781.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2578bp|location=Sequence derived from alignment at C-tenellus_contig6781:180..2757- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6781:180..2757- >mRNA_C-tenellus_contig6781.1.1 ID=mRNA_C-tenellus_contig6781.1.1|Name=mRNA_C-tenellus_contig6781.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=633bp|location=Sequence derived from alignment at C-tenellus_contig6781:180..2757- (Choristocarpus tenellus KU2346)back to top |