mRNA_C-tenellus_contig6702.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig6702.1.1
Unique NamemRNA_C-tenellus_contig6702.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: D7FQR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR8_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 1.180e-82
Identity = 142/242 (58.68%), Postives = 186/242 (76.86%), Query Frame = 1
Query:    1 VFERPKDISKAFGGGRDPRQRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVSEFSRMWSASYEQMSLKTDDRFTTTYFVKDIDGRPEQSKVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARA 726
            VFERPKD+SKAFGGGRDP  +R+DPEE+++R EET+AIL  YRG    DL++E  +E +I+ AL Q+KRAM++GDT+GAVSALE VK  CS +GPLGAVVFLEL MALEATGRS +AQDIYK+LRRSKNR++KS+A+RLNEGLEAM+ LK+ R          ++MW+AS+  MS   + +++  Y+ KD DGRP +  VF+V DAK VL  A  +KG +S+ R++ AF+FLK RSE+A+ A
Sbjct:  203 VFERPKDMSKAFGGGRDPTLKRLDPEEKRRRDEETKAILNSYRGSTGEDLKREKESETEIKAALAQSKRAMKFGDTFGAVSALEGVKQECSIHGPLGAVVFLELAMALEATGRSYQAQDIYKVLRRSKNREIKSQAKRLNEGLEAMDMLKFGRVXXXXXXXXXTKMWTASFTPMSGDQEKKYSQVYYEKDADGRPSEDGVFAVEDAKQVLTFASKYKGGISKNRIIAAFDFLKQRSEEASLA 444          
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A6H5JWJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ1_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 6.690e-82
Identity = 142/242 (58.68%), Postives = 185/242 (76.45%), Query Frame = 1
Query:    1 VFERPKDISKAFGGGRDPRQRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVSEFSRMWSASYEQMSLKTDDRFTTTYFVKDIDGRPEQSKVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARA 726
            VFERPKD+SKAFGGGRDP  +R+DPEE+++R EET+AIL  YRG    DL++E  +E +I+ AL Q+KRAM++GDT+GAVSALE VK  CS +GPLGAVVFLEL MALEATGRS +AQDIYK+LRRSKNR++KS+A+RLNEGLEAM+ LK+ R           +MW+AS+  MS   + +++  Y+ KD DGRP +  VF+V DAK VL  A  +KG +S+ R++ AF+FLK RSE+A+ A
Sbjct:  305 VFERPKDMSKAFGGGRDPTLKRLDPEEKRRRDEETKAILNSYRGSTGEDLKREKESETEIKAALAQSKRAMKFGDTFGAVSALEGVKQECSIHGPLGAVVFLELAMALEATGRSYQAQDIYKVLRRSKNREIKSQAKRLNEGLEAMDMLKFGRVXXXXXXXXXXKMWTASFTPMSGDQEKKYSQVYYEKDADGRPSEDGVFAVEDAKQVLTFASKYKGGISKNRIIAAFDFLKQRSEEASLA 546          
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A7S3KWU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWU3_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.900e-28
Identity = 101/251 (40.24%), Postives = 136/251 (54.18%), Query Frame = 1
Query:    1 VFERPKDISKAFGGGRDPRQRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVS-EFSR-------MWSASYEQMSLKTDDRFTTTYFVKDIDG----RPEQSKVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDA 717
             F RP+DISKA+GGGR       D E   K  EETR  L+RYR     +++ E  +  +I  ALE A  AMR G    AVSALE+V   CSTN  +G  VFLEL MA EA GR+ EA  +Y  L RS+  DVK  A+RL  GLEAM+F+      + EV S +F+R       + +   ++ +   DD + T Y   D+ G    +  +S V S  +A+ VLL A G  G + + R++QA   L    +DA
Sbjct:  295 AFPRPRDISKAYGGGRRIGPGFSDEEARLKSTEETRERLKRYREKMGIEVQSEKEHADEINQALEIAALAMRRGVYSTAVSALEKVTQWCSTNSKIGGKVFLELAMAYEAVGRTQEAITVYSTLSRSRMEDVKFNAKRLLYGLEAMQFM------QNEVRSKDFARNKAKNTFIDATGLDKFAQNFDDVYQTAYV--DLQGNFYKKLTESVVRSPREARQVLLQATG-SGEVGRARIVQALRSLSRNFDDA 536          
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A7S2A140_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A140_TRICV)

HSP 1 Score: 118 bits (296), Expect = 1.220e-26
Identity = 89/233 (38.20%), Postives = 127/233 (54.51%), Query Frame = 1
Query:    4 FERPKDISKAFGGGRDPRQRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEA----EVVSEFSRMWSASYEQMSLKTDDRFTTTYFVKDIDGRPE--QSKVFSVNDAKDVLLAADGFKGSLSQFRVLQA 684
            FERP DISKA+GGGR     +VD    +K  E+TRA L+RYR     +++ E  +  +I+ AL  A RAM  G    AVSALE+V   CSTN  +G  VFLEL MA EA GR+ EA  +Y  L   +  ++K  A+RL  G+EAMEF++     +A     V   F  + +      +   DDR+ T +   D     +  +S V  V +A+ +L+ A G  G + + +V+QA
Sbjct:  176 FERPNDISKAYGGGRRIDPGKVDKAAMEKSVEDTRARLQRYREKVGIEVQSEKDHAEEIETALGIASRAMERGVYGTAVSALEKVTKHCSTNSKVGGRVFLELAMAYEAVGRTPEAVRVYTALSTCRIEEIKHNAKRLLYGVEAMEFMRNEAKSKAFSKKSVADPF--IDATGLRNFAENFDDRYNTAWIDMDSGFYKQLTESVVRGVREARQILMRATG-SGEVDRMKVVQA 405          
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A7S3V4N3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4N3_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.200e-25
Identity = 94/261 (36.02%), Postives = 139/261 (53.26%), Query Frame = 1
Query:    4 FERPKDISKAFGGGR----DPRQRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVSEFSR-------MWSASYEQMSLKTDDRFTTTYFVKDIDG----RPEQSKVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARAVDMER 741
            F RPKDISKA+GGG+    D      D   ++K  E+TR  L RYR     +++ E  +  +I  ALE A+RAM+ G    A S+LE+V   CSTN  +G  VFLEL MA EA GRS EA  IY  L   +   +K  A+RL  G+EAM+F++     E   V  FS+       + +     ++   DD++ T Y   D  G    +  +S V S+ +A+ ++LAA    G + + +++QA   + DRS   A A +M++
Sbjct:  260 FPRPKDISKAYGGGKRIGADIVTTMEDERRKEKAVEDTREKLRRYREKVGIEVQSEKDHAAEIAEALELAQRAMQRGIYGTATSSLEKVTQYCSTNSEVGGQVFLELAMAYEAVGRSGEAIQIYTTLSTCRMETIKFNAKRLLYGIEAMQFMR-----EEAKVKSFSKKRATETFIETTGLGNIADNFDDKYNTAYIDLDRRGGFYKKLTESVVRSIREARQIILAATN-SGEVDRTKIVQALRSI-DRSFSDALAKEMKK 513          
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A7S4D540_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D540_HETAK)

HSP 1 Score: 112 bits (280), Expect = 1.040e-24
Identity = 82/249 (32.93%), Postives = 136/249 (54.62%), Query Frame = 1
Query:    1 VFERPKDISKAFGGGR--DPRQRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLL-RRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVSEFSRMWSASYEQMSLKTDDRFTTTYFV-KDIDGRPEQS-KVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARAVD 732
            VFERPKDISKA+GGGR       ++  EE ++R EETR +LE     + A+ E E  +  +I  A+ + KR +++GD +GA+  LE V+   +     G    LELGM LE+  R  EA  +Y LL  +S+  D+K  A+ L+ G+ A+  + +         +E+   W   + +  ++TD+R+ + Y   +D DG P  + +  SV  A+  LL    ++  +S  R+++A +FL+ RS++  +  D
Sbjct:   18 VFERPKDISKAYGGGRRIGVGGFQMSAEERQRRDEETRRLLEEALQGSTAERELEEEHAEEIDAAMGRVKRLLQFGDRWGALEELEGVRPWLNPKSERGGRALLELGMVLESAKRQQEAVQVYNLLYSKSRIGDIKKNAKALSAGIAAINDMNFK-------TAEYESQWIWDFPE--IQTDNRYASGYVQDRDADGVPASTNEAKSVTSARFTLLNVFKYRKGISAQRIVKALKFLQSRSDEMLKMAD 257          
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A7S2YC46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YC46_9STRA)

HSP 1 Score: 105 bits (263), Expect = 3.950e-24
Identity = 72/154 (46.75%), Postives = 96/154 (62.34%), Query Frame = 1
Query:    1 VFERPKDISKAFGGGRDPRQRRVDP----EEEKKRAEE-TRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFL 447
             F RP+DISKA+GGGR     RV P    EE K +++E TR  L++YR     D+E E  +  +I+ AL+    AM+ G    AVSALE+V   CSTN  +G  VFLEL MA EA GR+ EA  +Y +L RS+  D+K  A+RL  G+EAM+F+
Sbjct:   56 AFPRPRDISKAYGGGR-----RVGPGYSNEEAKLKSQESTRERLKKYREKVGIDVESEKEHADEIEEALKIGSLAMQRGMYSTAVSALEKVTKHCSTNSKVGGKVFLELAMAYEAVGRTPEAIKVYSVLSRSRMEDIKFDAKRLLYGIEAMQFM 204          
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: B7FZN1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZN1_PHATC)

HSP 1 Score: 106 bits (264), Expect = 3.520e-22
Identity = 90/257 (35.02%), Postives = 133/257 (51.75%), Query Frame = 1
Query:    1 VFERPKDISKAFGGGRDPRQRRVDP--EEEKKRAEETRAI---LERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVSEFSR-------MWSASYEQMSLKTDDRFTTTYFVKDIDG---RPEQSKVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARA 726
             F RP+DISKA+GGGR     R+ P    E+ R E T A    L+RYR     ++E E  +  +I  AL     AM  G    AVSALE+V   CS+N  +G+ VFLEL MA EA GR+ EA  +Y  L + +  D+K  A+RL  GLEAM+F++ +        SEFSR       + +     ++   DD++   Y   +      +  ++ V S  +A+ +LL A G  G + + R++QA   L  + +D  +A
Sbjct:  342 AFPRPRDISKAYGGGR-----RIGPGFSNEQARVESTAATRERLQRYREKVGIEVESEKLHADEIAEALRIGSLAMERGIYSTAVSALEKVTRYCSSNSKVGSKVFLELAMAYEAVGRTEEAIAVYTTLSKCRMEDIKHNAKRLLYGLEAMQFMQKNVKS-----SEFSRKRAKNVFVDTTGLANIAEAFDDKYNMAYLDLEKGNYYKKLTEAVVRSPREARQILLKAVG-AGEVPRLRIVQALRSLARQFDDLLQA 587          
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A1Z5KS82_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS82_FISSO)

HSP 1 Score: 105 bits (263), Expect = 4.130e-22
Identity = 94/277 (33.94%), Postives = 146/277 (52.71%), Query Frame = 1
Query:    1 VFERPKDISKAFGGGRDPRQRRVDP---EEEKKRA--EETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVSEFSRMW--SASYEQMSLKTDDRFTTTYFVKDIDG----RPEQSKVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARAVDMEREALQQKEETGLEVARGVPV 798
             F RPKDISKA+GGGR     RV P    EE   A  E TR  L++YR     D++ E  +  +I +AL +   AM+ G    AV+ LE+V   CS+N  +G  VFLEL MA EA+GR  EA  +Y+ L +S+  ++K  A RL  GLEAM F++ +   +A   ++    +  +     ++   DD + T +   D+D     +  +S V S  +A+ VL+ A    G + + RV+QA   +  R +DA   +++++   +  EE  + V  G P+
Sbjct:  163 AFARPKDISKAYGGGR-----RVGPGYSNEELSEASVEATRERLQQYREKVGIDVKSEKDHAAEIDLALRKGAYAMQRGMYSAAVTDLEQVTKYCSSNSKVGGKVFLELAMAYEASGRLEEASFVYRTLSKSRIEEIKINASRLLYGLEAMLFMRDNVGSKAFSRTKVRNTFIDTTGLANIAQNFDDVYNTAWI--DLDKGFYKQLTESVVRSPREARQVLMRAVA-GGEVPRLRVVQALRSIARRFDDALE-IEIKKAESKVVEEESVAVIDGKPI 430          
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A7S0T4K8_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4K8_9RHOD)

HSP 1 Score: 100 bits (249), Expect = 2.950e-21
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 1
Query:    1 VFERPKDISKAFGGGRD-PR---QRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEV-VSEFSRMWSASYEQMSLKTDDRFTTTYF 561
            VF RP +ISKA+GGGR  PR   Q R + EE++K+A+ T+A+L+ YR     D ++E  +   +  A+ ++++ ++    Y AV  LE VK   ST   LG  + +EL +ALE  GR+ +A+++Y  LR+S    + SKA++L+ G  AM+ LK    G A + V +F+       +   L T  R+ TTYF
Sbjct:   63 VFPRPDNISKAYGGGRTIPRGGLQPREETEEDRKKAQRTKALLDSYRTAMGIDTKREEQHRETVLEAIAKSRKLLKDSRPYEAVRLLESVKEYVSTKSELGGELHMELALALEVVGRTEDARELYAELRKSPVSRIASKAKQLSFGFSAMQELKLDSDGGAGLKVMDFNLP-----DLAKLSTARRYDTTYF 249          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQR8_ECTSI1.180e-8258.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWJ1_9PHAE6.690e-8258.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3KWU3_9STRA1.900e-2840.24Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S2A140_TRICV1.220e-2638.20Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S3V4N3_9STRA1.200e-2536.02Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4D540_HETAK1.040e-2432.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2YC46_9STRA3.950e-2446.75Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
B7FZN1_PHATC3.520e-2235.02Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5KS82_FISSO4.130e-2233.94Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S0T4K8_9RHOD2.950e-2136.98Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6702contigC-tenellus_contig6702:2271..7116 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FQR8
Model size822
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.94e-83
EggNOG OGs28KSY@1|root,2QT92@2759|Eukaryota
Cds size822
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789986.5323014-CDS-C-tenellus_contig6702:2270..24681680789986.5323014-CDS-C-tenellus_contig6702:2270..2468Choristocarpus tenellus KU2346CDSC-tenellus_contig6702 2271..2468 -
1680789986.543827-CDS-C-tenellus_contig6702:3065..32761680789986.543827-CDS-C-tenellus_contig6702:3065..3276Choristocarpus tenellus KU2346CDSC-tenellus_contig6702 3066..3276 -
1680789986.5528378-CDS-C-tenellus_contig6702:3922..40711680789986.5528378-CDS-C-tenellus_contig6702:3922..4071Choristocarpus tenellus KU2346CDSC-tenellus_contig6702 3923..4071 -
1680789986.5619328-CDS-C-tenellus_contig6702:6265..64071680789986.5619328-CDS-C-tenellus_contig6702:6265..6407Choristocarpus tenellus KU2346CDSC-tenellus_contig6702 6266..6407 -
1680789986.5711842-CDS-C-tenellus_contig6702:6994..71161680789986.5711842-CDS-C-tenellus_contig6702:6994..7116Choristocarpus tenellus KU2346CDSC-tenellus_contig6702 6995..7116 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6702.1.1prot_C-tenellus_contig6702.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig6702 2271..7116 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig6702.1.1

>prot_C-tenellus_contig6702.1.1 ID=prot_C-tenellus_contig6702.1.1|Name=mRNA_C-tenellus_contig6702.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=274bp
VFERPKDISKAFGGGRDPRQRRVDPEEEKKRAEETRAILERYRGVANADL
EKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVV
FLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLK
YSRPGEAEVVSEFSRMWSASYEQMSLKTDDRFTTTYFVKDIDGRPEQSKV
FSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARAVDMEREAL
QQKEETGLEVARGVPVKEEEAEGG
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mRNA from alignment at C-tenellus_contig6702:2271..7116-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig6702.1.1 ID=mRNA_C-tenellus_contig6702.1.1|Name=mRNA_C-tenellus_contig6702.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4846bp|location=Sequence derived from alignment at C-tenellus_contig6702:2271..7116- (Choristocarpus tenellus KU2346)
GTGTTTGAGAGACCTAAGGACATCAGCAAGGCTTTTGGGGGGGGGAGGGA CCCGAGGCAGCGGCGTGTTGATCCAGAGGAGGAGAAGAAACGTGCTGAGG AGACCAGGGCTATCCTTGAAAGGTGAGAAAAGTGTCAACGGGGAGGTGTC ACCTGTAGTTGGTGGTTAGAGTAAGTAATAACTAACCCTAACCCTAGCCC TAAGTAAGTAATAACTACTTGAACTGTGTCCTGTACATGGAATAAGGTTT GGGTTTGACATCAAAGTATTGCTTAAATTCTAACCCTAATGCTAAGAATG GATATATTTTTTGTGATGTGATTTATTGCTGTAGGTTCTTGCAATGGAAC ATAGATACATACCTAAACAAACTCCTTTTTGACAATCTTGACAATTTTAA CAAAGTCATGTGTCTTGTTTTAGCAACCCCAAAACATTTTGGAAGAAGAA ACCTAACGCCTTCCAGGGCTATTGCAGTTTGAACTTTACCTGTTCCATCC CTTCTTTCACTGATGGAGCAATTGAAACTGATATCAACCAAATATATATA GGCTAGACATAGTGCTTGAGCTTGTCATGCGGCTTTTGATCCCAACATGA GCATCTTATACCACAGTACACTACTTGCATGGCACACTAACTCTAACCCT GACTCACTAACCCTAACCCTAAACACACTAATCCTATGAGTGATTTGTCA ATTCTAAAGGTACCGTGGAGTGGCTAATGCAGACTTGGAGAAGGAGACTG CCAATGAAGGTAAGATTCAGGTTGCCTTAGAACAGGCCAAGCGTGCCATG AGGTATGGAGACACCTACGGCGCAGTGTCTGCTCTTGAAGAAGTGAAAGG GGTGAGAGTCCCCTCCCCCCCAAGCTGCCCCTTTGTAGTTTGTAGAAGTG ACTGACAAGAGTGCACACTGCCCGTTCAAGGTGTGGGCTGCGTTGGGGGG GTGTATCTGTTGGTCTGAAATTGTCGTTGAATATGTGTTTTTGAAGTCTG ATATTTGGTGATATTTGTGTATGTACATGAGGACAAAGGCATGGATCGGT TCTTGTTAGAAATTTTGTGCACTAGAATGAGATGTGAGATAGAGTTGGGG TGGGGGTTAGGGTTAGGGTTAAAGGGTTAGAGTTAGGGTTAGGGTTAGGG TTAGAGTTAGAGTTAGGGTCAGAGTTAAAGGTGAGTGATGTACCTCGCTG TGTCATACGAACCCGTAACATTTAAGAGGGTAGGGTTAGCAAGTTTTGCC CTGTTTGTATGTTTTGGGGATTGACTTCCCACAGGTTTGTTTTGCACTCT TTGTGTTTTCTCTATCAACAATCGACTGTAACAATATAACAGTATAACAA TATTTAGGATTTCAGAGTAGGTAAAATGTATAGAAGTGTGAAAGGTTTGT CTGGAGCAAGGATATTGACACTTGCTAACAAACACTATATTGCTAACAAA ATTACTTCAAGATTGCAACATTGTATTTATGACTCTCAACAGACACAGTC CTACCCTCTTAAATACTTAAATACTTTGACTCAAAATTGTTTGTAAGGTA AATACAGGATTTAGCTGGGAATGTTGGAAACTTTCAACCAGTGCGCCTGA GTACTCGAGTAGAGTAGTAGAGTAGTAATGCTTGCTTTAGAGTACTTTTC ATATGCTTTTAGATGGAAAGATGGAAAGATGGAAATATTGTAACCCCTGT TTATGGTACATAGAAGATAGGTAGTGACAGTTGACCCTCTCATTAGTACT AACTATTTGGTCAGTGGTATTCACTTTTATTTCCATAGCATTGAAATGTT TAGTTCAGCTGTATTACTGTACCGGCTACCGATCTCTTGGTAGGGTTAGG GTATATTGGGTATACAATGCTGATTTGTATCCACAGTGTACAAGTTCCGA TCCCTTCATTATTTCAAATTTTCTGGGGACAAAATATATTTTTTATGAGA AATTTCTCTGCCATACAACATTAAGAAGTCAGTATTAGTGATAGTATCAA ATTGGGGAGGATGAGATGAAGAGCATTGTTTTAGCCCTAACCCTAACCCT AGATTGATCCGTGTGTTGCAATCTCCCCTATGCTATACTACACTGTATTT GAAATTGGTGAGTGGGAACATGCACACATCAACCCTAACTCAATAACCAA TAGGCAACTTGCTTGTGTGTGTTTTTTGCGACAGTTTTCATTTGAATAAT ATATTCAATAATATACTTTAACAGGCTATTATCCTTGCTAGTCCCTTCAC CCTGTCTAATAATTAAAATAATAACAATGTTTATGATAATGATATAAAGA AAGTGGAGTAATGATGGTTATGTAGTATTAGTAGTATAGCACTGCCACAA TAAATAGGCTGAAACTCCTTGACACATCATATACCAATGACTGTGATGAT CTTGATTTTTGTATATTAGCATGACACATTTTTGTAGGGGGTGACATATT CTTTGTGCTATCTATTAGGTGTATCTATTCTCAGTGACATTGCATTGTGA TCGAGGCCAGGACCTGTGATTGAGAGATCTTGACCTTATGGTTAGGGTTA GTTTTTTTTGTGTACTTCTCACCAAAGTTTGTGTGACACTTTTTTAGTAA GAAGAGCGATTATTAACTATATAGTATATGGTGTTGATTTTACTTTTCAG GGTTAAATTGTAGTTATACTCTGGAGTAGAGTATTTCTATCCAATAATCA TTCTTTTTCAGTATCTTTTATACTCTCATTTTTTGTACTGTCTTTGAATA TGGGTTCTCGAATACTCTATATGTTGTTGCTTGTTTTCTTCATAACAAGT TCTGCCAGATGTTTTGAGGTTAGGGATCATTGCATCAAACGTTGAACCCA ATTGTGCAAATCAATCAATCTTAAATCTACGAGTATCCCAACTAGCCCTA GCCCTAACCCTAGCCCTAACCCCAACCCTCTACAGTTGTAAAAAACAACC ATGATATTGTCGGTAAGATATGACTATGATGAGGAAGGCTCTCTCTAACC CTAACCCTAAACCTCTACTTGTTTGTTAACCATATATATTGATAGGTGTG CTCCACCAATGGTCCTCTAGGAGCAGTGGTTTTCCTGGAGCTGGGCATGG CGTTAGAGGCCACTGGACGGTCTTCTGAAGCGCAGGATATCTACAAATTG CTGAGGAGGTCCAAGAACAGGGATGTGAAGAGCAAGGCCAGAAGGTGATC ATGTATATACATTTACATGATATTTACACTCTTTCAATAGAGGTATACTA ATCTGAACAGATAGGGGGTTAGGGTTATGAAGAGTGAGGAAGTTCTTATA TTTGCTTCAACATTAGGGTGATGTAGAAGAGGAAATATGATATTGATGTG TTCCTGAGGTTTTTCTGATATTTTCAAAATTGCAGATTTTCGTAAGCTCT GAGTATTTCATGTTAGCTGTACCTTGTGGTGTGTATCAAAACAGTAGTTG TATCAAAACAGTAGTTGTTGTATTTTGTGCTGCGTGGACTTGTCTTCTGT ATACTGTATACTGTATACTGTGTACTGGTGAACATTCCACCAATTGATTT GATGTGTCTCTGTGGGAAGGGTGTGTAGTCTCTGTCATGTCAAACATTTT GCTACTATTTGCATCTATGCTTCCATCTCACCTATCTTCTCCTTACTATG TTTGTATTTTTCTAATTTAACCCACTGTGCGAGTAAGTACTGGGACCCTC GCTGAATTTTGCTGAATTTTGCCTGTTTTTGGAAAAATATCAAATATATG CAGTATGTTTATAATAATCCAAGCTTCGAGGTCCATTTTTTTCACAACTC TCTATTACATCTTTCCATCTTGTTGCACATTTGGTGAAAGGCTGAATGAA GGACTAGAAGCAATGGAGTTTCTCAAGTACAGTCGACCTGGGGAGGCAGA GGTGGTGTCTGAGTTTTCAAGGATGTGGTCTGCCTCTTACGAGCAAATGT CCCTCAAGACAGATGACCGGTTCACTACAACATACTTTGTGAAGGACATA GATGGAAGGCCGGAGCAGTCCAAGGTCTTCAGTGTCAACGATGCCAAGGA TGTGAGTTTAGGTTTAGGGTTCTGGAGATTGTTCCCAAAAACTTTGTCTG AATTTGTAATTTGTTTTTGGCAGTTACCCGGTTTGGAATCTTTTCTGTTA GATGAACTGAATTTAAGTAGCAATTCTTGGCCGTTGGTGAAGAAATTGAA TTCTTGATTGGTGTCAGCGATGGTCTATATACTTTTGTTGATATTTGAAG GTTTGGTTCAAAATGGAGTCCGATGTAGCACAGTCTCTGCCAAGAAAACC AGTCTCGTTTTCTATTTCGGGAGATGGACCTTGTAACATAGTTTGAGGCT ACAAACACCTAAATTGTACATACCGTTATAGTAACAAGGAAACACATATC CACAGGTCCATGGTGATGTACTTTTATGATAGGTGATGATCACTGAACAC TATCGACGGGACACTGGGTTTTATTTTACTTCTGTGGCGTTGCCTTGAGG CCCATTTTCGAAATATTAGAGTTACGGTTGGAGAAAGGTAATGGAGTGAG GCATATTTTGAAATATCGCTCCTAAGGCAACCTTTTCAGCAGTCAGGCTC CACCCTTTTTCCCCATGCATGCAATCTATTGCCATATGTACCCTTCAGGT ACTCCTTGCTGCAGACGGGTTCAAGGGCAGTCTATCACAGTTCCGAGTCC TTCAAGCCTTTGAGTTCCTCAAGGATCGATCTGAGGACGCTGCAAGGGCT GTAGATATGGAACGAGAAGCTCTTCAACAAAAGGAGGAAACAGGTCTGGA AGTAGCAAGGGGTGTGCCAGTCAAAGAAGAAGAGGCAGAGGGGGGA
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Coding sequence (CDS) from alignment at C-tenellus_contig6702:2271..7116-

>mRNA_C-tenellus_contig6702.1.1 ID=mRNA_C-tenellus_contig6702.1.1|Name=mRNA_C-tenellus_contig6702.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=822bp|location=Sequence derived from alignment at C-tenellus_contig6702:2271..7116- (Choristocarpus tenellus KU2346)
GTGTTTGAGAGACCTAAGGACATCAGCAAGGCTTTTGGGGGGGGGAGGGA
CCCGAGGCAGCGGCGTGTTGATCCAGAGGAGGAGAAGAAACGTGCTGAGG
AGACCAGGGCTATCCTTGAAAGGTACCGTGGAGTGGCTAATGCAGACTTG
GAGAAGGAGACTGCCAATGAAGGTAAGATTCAGGTTGCCTTAGAACAGGC
CAAGCGTGCCATGAGGTATGGAGACACCTACGGCGCAGTGTCTGCTCTTG
AAGAAGTGAAAGGGGTGTGCTCCACCAATGGTCCTCTAGGAGCAGTGGTT
TTCCTGGAGCTGGGCATGGCGTTAGAGGCCACTGGACGGTCTTCTGAAGC
GCAGGATATCTACAAATTGCTGAGGAGGTCCAAGAACAGGGATGTGAAGA
GCAAGGCCAGAAGGCTGAATGAAGGACTAGAAGCAATGGAGTTTCTCAAG
TACAGTCGACCTGGGGAGGCAGAGGTGGTGTCTGAGTTTTCAAGGATGTG
GTCTGCCTCTTACGAGCAAATGTCCCTCAAGACAGATGACCGGTTCACTA
CAACATACTTTGTGAAGGACATAGATGGAAGGCCGGAGCAGTCCAAGGTC
TTCAGTGTCAACGATGCCAAGGATGTACTCCTTGCTGCAGACGGGTTCAA
GGGCAGTCTATCACAGTTCCGAGTCCTTCAAGCCTTTGAGTTCCTCAAGG
ATCGATCTGAGGACGCTGCAAGGGCTGTAGATATGGAACGAGAAGCTCTT
CAACAAAAGGAGGAAACAGGTCTGGAAGTAGCAAGGGGTGTGCCAGTCAA
AGAAGAAGAGGCAGAGGGGGGA
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