mRNA_C-tenellus_contig6702.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: D7FQR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR8_ECTSI) HSP 1 Score: 270 bits (689), Expect = 1.180e-82 Identity = 142/242 (58.68%), Postives = 186/242 (76.86%), Query Frame = 1 Query: 1 VFERPKDISKAFGGGRDPRQRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVSEFSRMWSASYEQMSLKTDDRFTTTYFVKDIDGRPEQSKVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARA 726 VFERPKD+SKAFGGGRDP +R+DPEE+++R EET+AIL YRG DL++E +E +I+ AL Q+KRAM++GDT+GAVSALE VK CS +GPLGAVVFLEL MALEATGRS +AQDIYK+LRRSKNR++KS+A+RLNEGLEAM+ LK+ R ++MW+AS+ MS + +++ Y+ KD DGRP + VF+V DAK VL A +KG +S+ R++ AF+FLK RSE+A+ A Sbjct: 203 VFERPKDMSKAFGGGRDPTLKRLDPEEKRRRDEETKAILNSYRGSTGEDLKREKESETEIKAALAQSKRAMKFGDTFGAVSALEGVKQECSIHGPLGAVVFLELAMALEATGRSYQAQDIYKVLRRSKNREIKSQAKRLNEGLEAMDMLKFGRVXXXXXXXXXTKMWTASFTPMSGDQEKKYSQVYYEKDADGRPSEDGVFAVEDAKQVLTFASKYKGGISKNRIIAAFDFLKQRSEEASLA 444
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A6H5JWJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ1_9PHAE) HSP 1 Score: 269 bits (687), Expect = 6.690e-82 Identity = 142/242 (58.68%), Postives = 185/242 (76.45%), Query Frame = 1 Query: 1 VFERPKDISKAFGGGRDPRQRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVSEFSRMWSASYEQMSLKTDDRFTTTYFVKDIDGRPEQSKVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARA 726 VFERPKD+SKAFGGGRDP +R+DPEE+++R EET+AIL YRG DL++E +E +I+ AL Q+KRAM++GDT+GAVSALE VK CS +GPLGAVVFLEL MALEATGRS +AQDIYK+LRRSKNR++KS+A+RLNEGLEAM+ LK+ R +MW+AS+ MS + +++ Y+ KD DGRP + VF+V DAK VL A +KG +S+ R++ AF+FLK RSE+A+ A Sbjct: 305 VFERPKDMSKAFGGGRDPTLKRLDPEEKRRRDEETKAILNSYRGSTGEDLKREKESETEIKAALAQSKRAMKFGDTFGAVSALEGVKQECSIHGPLGAVVFLELAMALEATGRSYQAQDIYKVLRRSKNREIKSQAKRLNEGLEAMDMLKFGRVXXXXXXXXXXKMWTASFTPMSGDQEKKYSQVYYEKDADGRPSEDGVFAVEDAKQVLTFASKYKGGISKNRIIAAFDFLKQRSEEASLA 546
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A7S3KWU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWU3_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.900e-28 Identity = 101/251 (40.24%), Postives = 136/251 (54.18%), Query Frame = 1 Query: 1 VFERPKDISKAFGGGRDPRQRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVS-EFSR-------MWSASYEQMSLKTDDRFTTTYFVKDIDG----RPEQSKVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDA 717 F RP+DISKA+GGGR D E K EETR L+RYR +++ E + +I ALE A AMR G AVSALE+V CSTN +G VFLEL MA EA GR+ EA +Y L RS+ DVK A+RL GLEAM+F+ + EV S +F+R + + ++ + DD + T Y D+ G + +S V S +A+ VLL A G G + + R++QA L +DA Sbjct: 295 AFPRPRDISKAYGGGRRIGPGFSDEEARLKSTEETRERLKRYREKMGIEVQSEKEHADEINQALEIAALAMRRGVYSTAVSALEKVTQWCSTNSKIGGKVFLELAMAYEAVGRTQEAITVYSTLSRSRMEDVKFNAKRLLYGLEAMQFM------QNEVRSKDFARNKAKNTFIDATGLDKFAQNFDDVYQTAYV--DLQGNFYKKLTESVVRSPREARQVLLQATG-SGEVGRARIVQALRSLSRNFDDA 536
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A7S2A140_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A140_TRICV) HSP 1 Score: 118 bits (296), Expect = 1.220e-26 Identity = 89/233 (38.20%), Postives = 127/233 (54.51%), Query Frame = 1 Query: 4 FERPKDISKAFGGGRDPRQRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEA----EVVSEFSRMWSASYEQMSLKTDDRFTTTYFVKDIDGRPE--QSKVFSVNDAKDVLLAADGFKGSLSQFRVLQA 684 FERP DISKA+GGGR +VD +K E+TRA L+RYR +++ E + +I+ AL A RAM G AVSALE+V CSTN +G VFLEL MA EA GR+ EA +Y L + ++K A+RL G+EAMEF++ +A V F + + + DDR+ T + D + +S V V +A+ +L+ A G G + + +V+QA Sbjct: 176 FERPNDISKAYGGGRRIDPGKVDKAAMEKSVEDTRARLQRYREKVGIEVQSEKDHAEEIETALGIASRAMERGVYGTAVSALEKVTKHCSTNSKVGGRVFLELAMAYEAVGRTPEAVRVYTALSTCRIEEIKHNAKRLLYGVEAMEFMRNEAKSKAFSKKSVADPF--IDATGLRNFAENFDDRYNTAWIDMDSGFYKQLTESVVRGVREARQILMRATG-SGEVDRMKVVQA 405
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A7S3V4N3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4N3_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.200e-25 Identity = 94/261 (36.02%), Postives = 139/261 (53.26%), Query Frame = 1 Query: 4 FERPKDISKAFGGGR----DPRQRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVSEFSR-------MWSASYEQMSLKTDDRFTTTYFVKDIDG----RPEQSKVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARAVDMER 741 F RPKDISKA+GGG+ D D ++K E+TR L RYR +++ E + +I ALE A+RAM+ G A S+LE+V CSTN +G VFLEL MA EA GRS EA IY L + +K A+RL G+EAM+F++ E V FS+ + + ++ DD++ T Y D G + +S V S+ +A+ ++LAA G + + +++QA + DRS A A +M++ Sbjct: 260 FPRPKDISKAYGGGKRIGADIVTTMEDERRKEKAVEDTREKLRRYREKVGIEVQSEKDHAAEIAEALELAQRAMQRGIYGTATSSLEKVTQYCSTNSEVGGQVFLELAMAYEAVGRSGEAIQIYTTLSTCRMETIKFNAKRLLYGIEAMQFMR-----EEAKVKSFSKKRATETFIETTGLGNIADNFDDKYNTAYIDLDRRGGFYKKLTESVVRSIREARQIILAATN-SGEVDRTKIVQALRSI-DRSFSDALAKEMKK 513
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A7S4D540_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D540_HETAK) HSP 1 Score: 112 bits (280), Expect = 1.040e-24 Identity = 82/249 (32.93%), Postives = 136/249 (54.62%), Query Frame = 1 Query: 1 VFERPKDISKAFGGGR--DPRQRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLL-RRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVSEFSRMWSASYEQMSLKTDDRFTTTYFV-KDIDGRPEQS-KVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARAVD 732 VFERPKDISKA+GGGR ++ EE ++R EETR +LE + A+ E E + +I A+ + KR +++GD +GA+ LE V+ + G LELGM LE+ R EA +Y LL +S+ D+K A+ L+ G+ A+ + + +E+ W + + ++TD+R+ + Y +D DG P + + SV A+ LL ++ +S R+++A +FL+ RS++ + D Sbjct: 18 VFERPKDISKAYGGGRRIGVGGFQMSAEERQRRDEETRRLLEEALQGSTAERELEEEHAEEIDAAMGRVKRLLQFGDRWGALEELEGVRPWLNPKSERGGRALLELGMVLESAKRQQEAVQVYNLLYSKSRIGDIKKNAKALSAGIAAINDMNFK-------TAEYESQWIWDFPE--IQTDNRYASGYVQDRDADGVPASTNEAKSVTSARFTLLNVFKYRKGISAQRIVKALKFLQSRSDEMLKMAD 257
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A7S2YC46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YC46_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.950e-24 Identity = 72/154 (46.75%), Postives = 96/154 (62.34%), Query Frame = 1 Query: 1 VFERPKDISKAFGGGRDPRQRRVDP----EEEKKRAEE-TRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFL 447 F RP+DISKA+GGGR RV P EE K +++E TR L++YR D+E E + +I+ AL+ AM+ G AVSALE+V CSTN +G VFLEL MA EA GR+ EA +Y +L RS+ D+K A+RL G+EAM+F+ Sbjct: 56 AFPRPRDISKAYGGGR-----RVGPGYSNEEAKLKSQESTRERLKKYREKVGIDVESEKEHADEIEEALKIGSLAMQRGMYSTAVSALEKVTKHCSTNSKVGGKVFLELAMAYEAVGRTPEAIKVYSVLSRSRMEDIKFDAKRLLYGIEAMQFM 204
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: B7FZN1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZN1_PHATC) HSP 1 Score: 106 bits (264), Expect = 3.520e-22 Identity = 90/257 (35.02%), Postives = 133/257 (51.75%), Query Frame = 1 Query: 1 VFERPKDISKAFGGGRDPRQRRVDP--EEEKKRAEETRAI---LERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVSEFSR-------MWSASYEQMSLKTDDRFTTTYFVKDIDG---RPEQSKVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARA 726 F RP+DISKA+GGGR R+ P E+ R E T A L+RYR ++E E + +I AL AM G AVSALE+V CS+N +G+ VFLEL MA EA GR+ EA +Y L + + D+K A+RL GLEAM+F++ + SEFSR + + ++ DD++ Y + + ++ V S +A+ +LL A G G + + R++QA L + +D +A Sbjct: 342 AFPRPRDISKAYGGGR-----RIGPGFSNEQARVESTAATRERLQRYREKVGIEVESEKLHADEIAEALRIGSLAMERGIYSTAVSALEKVTRYCSSNSKVGSKVFLELAMAYEAVGRTEEAIAVYTTLSKCRMEDIKHNAKRLLYGLEAMQFMQKNVKS-----SEFSRKRAKNVFVDTTGLANIAEAFDDKYNMAYLDLEKGNYYKKLTEAVVRSPREARQILLKAVG-AGEVPRLRIVQALRSLARQFDDLLQA 587
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A1Z5KS82_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS82_FISSO) HSP 1 Score: 105 bits (263), Expect = 4.130e-22 Identity = 94/277 (33.94%), Postives = 146/277 (52.71%), Query Frame = 1 Query: 1 VFERPKDISKAFGGGRDPRQRRVDP---EEEKKRA--EETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEVVSEFSRMW--SASYEQMSLKTDDRFTTTYFVKDIDG----RPEQSKVFSVNDAKDVLLAADGFKGSLSQFRVLQAFEFLKDRSEDAARAVDMEREALQQKEETGLEVARGVPV 798 F RPKDISKA+GGGR RV P EE A E TR L++YR D++ E + +I +AL + AM+ G AV+ LE+V CS+N +G VFLEL MA EA+GR EA +Y+ L +S+ ++K A RL GLEAM F++ + +A ++ + + ++ DD + T + D+D + +S V S +A+ VL+ A G + + RV+QA + R +DA +++++ + EE + V G P+ Sbjct: 163 AFARPKDISKAYGGGR-----RVGPGYSNEELSEASVEATRERLQQYREKVGIDVKSEKDHAAEIDLALRKGAYAMQRGMYSAAVTDLEQVTKYCSSNSKVGGKVFLELAMAYEASGRLEEASFVYRTLSKSRIEEIKINASRLLYGLEAMLFMRDNVGSKAFSRTKVRNTFIDTTGLANIAQNFDDVYNTAWI--DLDKGFYKQLTESVVRSPREARQVLMRAVA-GGEVPRLRVVQALRSIARRFDDALE-IEIKKAESKVVEEESVAVIDGKPI 430
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Match: A0A7S0T4K8_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4K8_9RHOD) HSP 1 Score: 100 bits (249), Expect = 2.950e-21 Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 1 Query: 1 VFERPKDISKAFGGGRD-PR---QRRVDPEEEKKRAEETRAILERYRGVANADLEKETANEGKIQVALEQAKRAMRYGDTYGAVSALEEVKGVCSTNGPLGAVVFLELGMALEATGRSSEAQDIYKLLRRSKNRDVKSKARRLNEGLEAMEFLKYSRPGEAEV-VSEFSRMWSASYEQMSLKTDDRFTTTYF 561 VF RP +ISKA+GGGR PR Q R + EE++K+A+ T+A+L+ YR D ++E + + A+ ++++ ++ Y AV LE VK ST LG + +EL +ALE GR+ +A+++Y LR+S + SKA++L+ G AM+ LK G A + V +F+ + L T R+ TTYF Sbjct: 63 VFPRPDNISKAYGGGRTIPRGGLQPREETEEDRKKAQRTKALLDSYRTAMGIDTKREEQHRETVLEAIAKSRKLLKDSRPYEAVRLLESVKEYVSTKSELGGELHMELALALEVVGRTEDARELYAELRKSPVSRIASKAKQLSFGFSAMQELKLDSDGGAGLKVMDFNLP-----DLAKLSTARRYDTTYF 249 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6702.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6702.1.1 >prot_C-tenellus_contig6702.1.1 ID=prot_C-tenellus_contig6702.1.1|Name=mRNA_C-tenellus_contig6702.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=274bp VFERPKDISKAFGGGRDPRQRRVDPEEEKKRAEETRAILERYRGVANADLback to top mRNA from alignment at C-tenellus_contig6702:2271..7116- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6702.1.1 ID=mRNA_C-tenellus_contig6702.1.1|Name=mRNA_C-tenellus_contig6702.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4846bp|location=Sequence derived from alignment at C-tenellus_contig6702:2271..7116- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6702:2271..7116- >mRNA_C-tenellus_contig6702.1.1 ID=mRNA_C-tenellus_contig6702.1.1|Name=mRNA_C-tenellus_contig6702.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=822bp|location=Sequence derived from alignment at C-tenellus_contig6702:2271..7116- (Choristocarpus tenellus KU2346)back to top |