mRNA_C-tenellus_contig670.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig670.1.2 vs. uniprot
Match: D7G620_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G620_ECTSI) HSP 1 Score: 335 bits (859), Expect = 5.510e-104 Identity = 192/387 (49.61%), Postives = 230/387 (59.43%), Query Frame = 2 Query: 248 FESTWEEDSS--GFHHLEHVNINMPEHGPITQLYFDTLLFAPDSRRSQNIDKGSGTIWANIGTSQLHMPHGEPQVVPGTIGLIY--PDVEEIFPRLRQAA---GND-----ALEGTKFAWVERTSKTAEVTG------PFGNKLRLHSQ--------PGGDKGAL----------FDPRGGQLPSPP-------SLGLGLAYVHLRARRGTAGGIGRFYRSVFGAEVLESG--------------------------------EAETVGMGGGRR-VGALVRTGPSQHLGFFEVEEGEEAPSSYDGHHVCLYLTEECFRSSFLELERMGLIFINPRRNFGRADTLEKALEERQYRVKDIVDPTSGELLHELEHEIRSTNHPSYPVGR 1180 F+S W ED++ G HLEHVN+ +P H P LY+D L FAPD+RR+ NI KGSGTIWANIG++Q+H+P GEPQVVPGTIGL+Y D+ E+ RL + A GN+ ALEGTKFAW E + E TG P+GN RLH + P + A DPRGG+LP+ P SLGLG++YV R R GTA GI RFYR +FGAE E G T RR A+VR GP QHL F E E+ YDGHH+C+YL EE FR SF E ER GL+F+NPRRNFG+ADTLEKALEE+QYR+KD+VDP +GELLH LEHEIRS +HPSYPV R Sbjct: 41 FKSPWNEDNNKHGLQHLEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGSTQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENAITNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAAXXXXXXXXXXALDPRGGRLPNVPAGGQGSSSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAQEMGGXXXXXXXXXXXXSSGEDVCSVTQEGDSGKGLRCSTATEADKRRGTAAVVRVGPVQHLAFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSYPVAR 427
BLAST of mRNA_C-tenellus_contig670.1.2 vs. uniprot
Match: A0A7S1NL54_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NL54_9EUGL) HSP 1 Score: 187 bits (476), Expect = 1.490e-48 Identity = 122/307 (39.74%), Postives = 168/307 (54.72%), Query Frame = 2 Query: 272 SSGFHHLEHVNINMPEHGPITQLYFDTLLFAPDSRRSQNIDKGSGTIWANIGTSQLHMPHGEPQVVPGTIGLIYPDVEEIFPRLRQAAGNDALEGTKFAWVERTSKTAEVTGPFGNKLRLHSQPGGDKGALFDPRGGQ-LPSPPSLGLGLAYVHLRARRGTAGGIGRFYRSVFGAEVLESGEAETVGMGGGRRVGALVRTGPSQHLGFFEVEEGEEAPSSYDGHHVCLYLTE-ECFRSSFLELERMGLIFINPRRNFGRADT-LEKALEE-RQYRVKDIVDPTSGELLHELEHEIRSTNHPSYPVGR 1180 ++G LEH+N+N+P+ P YF L A D RR+ NI +G GT+WANIG SQ+H+P G+PQV+PG + L YP + + R R AG F ++ EV P+GN L + GA DPRG Q + SLG G+A + LR + G A GIGRFYR F AEV E A T V+ G Q + F E G+EA YDGHH+ +Y+ + F+ +F L+ GL+++N R F A T L A+++ +Q+R+ +I DP LLH LEHEIR+ H + P R Sbjct: 176 TTGVSLLEHINVNVPQQQPAYDFYFGLLGCAVDPRRAANIAQGKGTMWANIGISQIHIPVGDPQVIPGVVNLTYPSLNAV--RRRLGAG-------PFRCID-VGSALEVHCPYGNVYVLR-----ETGAPADPRGVQPIEGDASLGTGMAGLELRCKPGAAAGIGRFYRHYFEAEVTEEPGAVT------------VKCGTYQTISFCE---GDEALPPYDGHHMAMYMASMQAFQDTFKRLDADGLVWVNTR--FSDASTTLSLAVDKWQQFRILEIRDPLDKSLLHTLEHEIRAPTHEACPFTR 450
BLAST of mRNA_C-tenellus_contig670.1.2 vs. uniprot
Match: A0A2V6QD02_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6QD02_9BACT) HSP 1 Score: 148 bits (373), Expect = 3.790e-36 Identity = 103/301 (34.22%), Postives = 143/301 (47.51%), Query Frame = 2 Query: 266 EDSSGFHHLEHVNINMPEHGPITQLYFDTLLFAPDSRRSQNIDKGSGTIWANIGTSQLHMPHGEPQVVPGTIGLIYPDVEEIFPRLRQAAGNDALEGTKFAWVERTSKTAEVTGPFGNKLRLHSQPGGDKGALFDPRGGQLPSPPSLGLGLAYVHLRARRGTAGGIGRFYRSVFGAEVLESGEAETVGMGGGRRVGALVRTGPSQHLGFFEVEEGEEAPSSYDGHHVCLYLTEECFRSSFLELERMGLIFINPRRNFGRADTLEKALEERQYRVKDIVDPTSGELLHELEHEIRSTNHPSY 1168 ED HLEHVN+ +P+ TQ Y + A R + G +W N G SQ H+P + QV+ G GL PD +E+ RL A + L+GT++A+ A+VT P+GN++RLH +PG P + LG+ YV L GTA GI RFYR + A + V A V+ G SQ L F E ++ + AP YDGHH+ +Y+ + F P + + + QYR DIVDP SG+++ ELEHE+R T HP Y Sbjct: 11 EDLGNITHLEHVNVRVPDQQLATQFY----VVALGGTRDPYLMVGLDNMWVNFGHSQFHLPTAKAQVLRGVTGLTIPDFDELGNRLSMAT--EKLKGTQYAYTVAADH-ADVTCPWGNRMRLH-RPGRRW--------------PRMELGMPYVELPVGTGTAEGIARFYREIMDAPAAVTHNG---------CVAAEVKVGTSQKLIFRETDD-QIAP--YDGHHIAIYIND----------------FSGPHKRMLERGIVSEESNPYQYRFVDIVDPESGKVMFELEHEVRCTTHPMY 261
BLAST of mRNA_C-tenellus_contig670.1.2 vs. uniprot
Match: A0A534NHJ4_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534NHJ4_9DELT) HSP 1 Score: 141 bits (356), Expect = 8.050e-34 Identity = 101/304 (33.22%), Postives = 145/304 (47.70%), Query Frame = 2 Query: 266 EDSSGFHHLEHVNINMPEHGPITQLYFDTLLFAPDSRRSQNIDKGSGTIWANIGTSQLHMP-HGEPQVVPGTIGLIYPDVEEIFPRLRQAAGNDALEGTKFAWVERTSKTAEVTGPFGNKLRLHSQPGGDKGALFDPRGGQLPSP--PSLGLGLAYVHLRARRGTAGGIGRFYRSVFGAEVLESGEAETVGMGGGRRVGALVRTGPSQHLGFFEVEEGEEAPSSYDGHHVCLYLTEECFRSSFLELERMGLIFINPRRNFGRADTLEKALEERQYRVKDIVDPTSGELLHELEHEIRSTNHPSY 1168 ED LEHVN+ +P+ T Y L FA R ++ G G +WAN+G Q H+P PQ++PG IGL+ PD++ + RL+ A + L+GT F+W ++ A VT P+GN+ R H P+P + LG+ YV + R GTA GI RFY+ V A E G V V G +Q L F E E E P YDGHH+ +Y+ +FL+ R + + + ++ Q+R KD++DP +G + LEHE+RS H Y Sbjct: 10 EDVGNIVLLEHVNVEIPDQAKATLFYVVGLGFA----RDPYLNVGLGNMWANVGEQQFHLPTRARPQIIPGLIGLVVPDLDLLESRLK--AVEEPLKGTHFSWSAESNSLA-VTCPWGNRFRCH-----------------CPTPRFSDMALGMPYVEFQTRPGTASGIARFYQEVMQAPSSMFSE-------NGMPV-VRVEIGRNQWLLFRETSE-EIRP--YDGHHIAIYVANFSRPYAFLQ----------------RHNRIMEDVQNHQFRFKDLIDPENGREVFRLEHEVRSLRHQMY 262
BLAST of mRNA_C-tenellus_contig670.1.2 vs. uniprot
Match: A0A535AXI2_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A535AXI2_9DELT) HSP 1 Score: 141 bits (355), Expect = 9.940e-34 Identity = 100/305 (32.79%), Postives = 146/305 (47.87%), Query Frame = 2 Query: 263 EEDSSGFHHLEHVNINMPEHGPITQLYFDTLLFAPDSRRSQNIDKGSGTIWANIGTSQLHMPHGEPQVVPGTIGLIYPDVEEIFPRLRQAAGNDALEGTKFAWVERTSKTAEVTGPFGNKLRLH--SQPGGDKGALFDPRGGQLPSPPSLGLGLAYVHLRARRGTAGGIGRFYRSVFGAE-VLESGEAETVGMGGGRRVGALVRTGPSQHLGFFEVEEGEEAPSSYDGHHVCLYLTEECFRSSFLELERMGLIFINPRRNFGRADTLEKALEERQYRVKDIVDPTSGELLHELEHEIRSTNHPSY 1168 EED LEH+N+ +P+ T Y + F R ++ G +WAN+G Q H+P PQ + G IGL+ PD++++ RL AA + L+GT+F+ + EVT P+GN+ + + S GD + LG+ YV G A GI RFY V GA ESG+ +G V+ G +Q L F E EE YDGHH+ +Y+ F + L++ GLI + +E Q+R+KD++DP SG+ L LEHE+RS HP + Sbjct: 6 EEDVGNIVLLEHINVQVPDQSLATLFYIVGMGFT----RDPYMNVGLRNMWANVGEQQFHLPTRPPQAIQGRIGLVVPDLDDLKERL--AAVEEGLKGTQFSSSAKADHL-EVTCPWGNRFQCYPASSRFGD-----------------MALGIPYVEFLVAPGRAAGIVRFYDRVLGAPGTTESGKDGAIGR---------VKIGRNQSLVF---RETEEPLKPYDGHHIAIYVAN--FSRPYSFLKQRGLI--------------SEEVENHQFRLKDVIDPESGDCLFLLEHEVRSLRHPMF 258
BLAST of mRNA_C-tenellus_contig670.1.2 vs. uniprot
Match: A0A2V7HGH9_9BACT (VOC domain-containing protein n=3 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7HGH9_9BACT) HSP 1 Score: 139 bits (349), Expect = 7.020e-33 Identity = 102/302 (33.77%), Postives = 137/302 (45.36%), Query Frame = 2 Query: 266 EDSSGFHHLEHVNINMPEHGPITQLYFDTLLFAPDSRRSQNIDKGSGTIWANIGTSQLHMPHGEPQVVPGTIGLIYPDVEEIFPRLRQAAGNDALEGTKFAWVERTSKTAEVTGPFGNKLRLHSQPGGDKGALFDPRGGQLPSPPSLGLGLAYVHLRARRGTAGGIGRFYRSVFGAEV-LESGEAETVGMGGGRRVGALVRTGPSQHLGFFEVEEGEEAPSSYDGHHVCLYLTEECFRSSFLELERMGLIFINPRRNFGRADTLEKALEERQYRVKDIVDPTSGELLHELEHEIRSTNHPSY 1168 ED HLEHVN +P+ T Y L F D +D +W N+G SQ H+P G P G +G + D + + RL A L GT++ + A+VT P+GN+LRLH + G D G + LG+ YV G A GI RFYR V A LE V A V+ GP Q L F E + YDG+H+ +Y+T+ F S +L G+I + QYR ++IVDP SG+LL+E+EHE+RS HP Y Sbjct: 12 EDVGNIVHLEHVNFRVPDQQLATAFYVTALGFTRDPYLMVGLDN----MWINLGRSQFHLPTGAPNQSRGRVGCVVSDFDALPERL--TAAEKWLTGTRYTHKAEKNH-ADVTCPWGNRLRLH-RAGSDFGFMT--------------LGMPYVEFPVPTGHADGIARFYREVMDAPSRLEQDNGSAV---------ARVQVGPGQSLRFRETSDDIRP---YDGYHIAVYVTD--FGGSHAKLNERGII--------------SQESNPYQYRFQEIVDPDSGKLLYEIEHEVRSFTHPMY 263
BLAST of mRNA_C-tenellus_contig670.1.2 vs. uniprot
Match: A0A1Q8J0T4_9BURK (VOC domain-containing protein n=2 Tax=Burkholderiaceae TaxID=119060 RepID=A0A1Q8J0T4_9BURK) HSP 1 Score: 139 bits (349), Expect = 7.190e-33 Identity = 101/301 (33.55%), Postives = 137/301 (45.51%), Query Frame = 2 Query: 266 EDSSGFHHLEHVNINMPEHGPITQLYFDTLLFAPDSRRSQNIDKGSGTIWANIGTSQLHMPHGEPQVVPGTIGLIYPDVEEIFPRLRQAAGNDALEGTKFAWVERTSKTAEVTGPFGNKLRLHSQPGGDKGALFDPRGGQLPSPPSLGLGLAYVHLRARRGTAGGIGRFYRSVFGAEVLESGEAETVGMGGGRRVGALVRTGPSQHLGFFEVEEGEEAPSSYDGHHVCLYLTEECFRSSFLELERMGLIFINPRRNFGRADTLEKALEERQYRVKDIVDPTSGELLHELEHEIRSTNHPSY 1168 ED+ LEHVN+ +P+ P T Y L R + G +W N+G SQ+H+PHGEPQ + G +GL+ + + RL A L + F W E + EVT P+GN+ + G GA + L LG+AYV L G+A I FYR +F A AE G R+ A++ G Q L + E A S YDGHH+ +Y+ + F + L GL + E QYR D+VDP SGE +LEHE+RS HP Y Sbjct: 9 EDTGNLVLLEHVNLTIPDQRPATAFYVSGLGLT----RDPYLMTGVTNMWINVGRSQIHLPHGEPQRLRGHVGLVLGERAALLERLH--AVRPLLAHSSFGWRECADRV-EVTCPWGNRYDCLDRDTGAPGAPWS----------GLDLGIAYVQLDVPVGSAASIAAFYREMFDAS------AEVRERDGSRQ--AVIAIGTRQQLIYAETSG---ANSHYDGHHIQIYVAD--FSGPYARLAARGLTY---------------GEETHQYRFADLVDPVSGERCFQLEHEVRSLRHPLY 264
BLAST of mRNA_C-tenellus_contig670.1.2 vs. uniprot
Match: A0A2E6Q3B8_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6Q3B8_9PROT) HSP 1 Score: 139 bits (349), Expect = 7.550e-33 Identity = 105/301 (34.88%), Postives = 144/301 (47.84%), Query Frame = 2 Query: 266 EDSSGFHHLEHVNINMPEHGPITQLYFDTLLFAPDSRRSQNIDKGSGTIWANIGTSQLHMPHGEPQVVPGTIGLIYPDVEEIFPRLRQAAGNDALEGTKFAWVERTSKTAEVTGPFGNKLRLHSQPGGDKGALFDPRGGQLPSPPSLGLGLAYVHLRARRGTAGGIGRFYRSVFGAEVLESGEAETVGMGGGRRVGALVRTGPSQHLGFFEVEEGEEAPSSYDGHHVCLYLTEECFRSSFLELERMGLIFINPRRNFGRADTLEKALEERQYRVKDIVDPTSGELLHELEHEIRSTNHPSY 1168 ED + F LEH NI +P+ T Y + F R + G +W NIG +Q+HMP G+PQ++PG G+ PD++ + RL +A D L GTKF + ++ +VT P+GNK R P DK LG+ YV +R GT+ GI RFYR V GA+ TV GG + A V +G Q + F E + + P +DGHH+ +YL F P + D + + + QYR IVDP +G+ LH LEHEIRS HP Y Sbjct: 10 EDLANFVGLEHTNIKVPDQRLATIFYVVGMGFT----RDPYMVPGVTNMWMNIGRTQIHMPTGKPQIIPGHTGITVPDLKALKNRL-EAVKKD-LRGTKFKFAASRNRV-DVTCPWGNKYRC--MPPSDKFGRTT-------------LGIRYVEFDSRPGTSDGIARFYREVMGAKA-------TVRKAGG--IAAHVESGYHQSMIFRETTK--KIPR-FDGHHIQVYLAN----------------FSGPHKALQELDLVSEESNQYQYRFLYIVDPDTGKRLHTLEHEIRSMTHPLY 260
BLAST of mRNA_C-tenellus_contig670.1.2 vs. uniprot
Match: A0A6L7MSF5_9GAMM (VOC domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7MSF5_9GAMM) HSP 1 Score: 137 bits (344), Expect = 2.770e-32 Identity = 95/306 (31.05%), Postives = 139/306 (45.42%), Query Frame = 2 Query: 263 EEDSSGFHHLEHVNINMPEHGPITQLYFDTLLFAPDSRRSQNIDKGSGTIWANIGTSQLHMPHGEPQVVPGTIGLIYPDVEEIFPRLRQAAGNDALEGTKFAWVERTSKTAE--VTGPFGNKLRLHSQPGGDKGALFDPRGGQLPSPPSLG--LGLAYVHLRARRGTAGGIGRFYRSVFGAEVLESGEAETVGMGGGRRVGALVRTGPSQHLGFFEVEEGEEAPSSYDGHHVCLYLTEECFRSSFLELERMGLIFINPRRNFGRADTLEKALEERQYRVKDIVDPTSGELLHELEHEIRSTNHPSY 1168 EED ++EH+N+ +P+ Y L F R ID G+ +W N G Q H+P E Q G IG++ PD++++ RL + + +EGT+FAW E A VT P+GN +R + P G LG+ + +R G++ GI RFYR VF V MGG SQ L + E ++ E P+ YDGHH+ +Y++ F P + D + + ++ QYR + IVDP SG +L ELEHE+RS HP + Sbjct: 10 EEDVGNILNMEHINLTVPDQQLAALFYVSGLGFT----RDPYIDFGTANMWINAGEQQFHLPKREAQKFRGHIGVVVPDLDDLRRRLDRI--DRIMEGTEFAWREVNDGPAHIAVTCPWGNDIRAYG--------------------PGFGTSLGIPFAEVRVPTGSSDGIARFYREVFNTPARVGQGCAEVSMGG------------SQWLTYRETDD--ELPA-YDGHHIAIYVSN----------------FSGPHSALAKHDLISEESDQHQYRFQTIVDPDSGNVLTELEHEVRSLKHPMF 258
BLAST of mRNA_C-tenellus_contig670.1.2 vs. uniprot
Match: A0A3S5JJX5_9GAMM (VOC domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TMED1 TaxID=1986731 RepID=A0A3S5JJX5_9GAMM) HSP 1 Score: 135 bits (340), Expect = 9.300e-32 Identity = 97/312 (31.09%), Postives = 143/312 (45.83%), Query Frame = 2 Query: 266 EDSSGFHHLEHVNINMPEHGPITQLYFDTLLFAPDSRRSQNIDKGSGTIWANIGTSQLHMPHGEPQVVPGTIGLIYPDVEEIFPRLRQAAGNDALEGTKFAWVERTSKTAEVTGPFGNKLRLHSQPGGDKGALFDPRGGQLPSPPSLGLGLAYVHLRARRGTAGGIGRFYRSVFGAEVLESGEAETVGMGGGRRVGALVRTGPSQHLGFFEVEEGEEAPSSYDGHHVCLYLTEECFRSSFLELERMGLIFINPRRNFGRADTLEKALEERQYRVKDIVDPTSGELLHELEHEIRSTNHPSYPVGRIVVGPSA 1201 ED S +EHVNI +P+ T Y + L R ID G +W N G Q H+P +PQV+ G IGL+ PD++ + RL L T+F++ + VT P+GNKL+ + G F+ R LG+ YV RGTA GI RFY +F + + + G Q L F E E+ + YDGHH+ +Y++ F + L+ GLI + + QYR + I+DP++G+ L ++EHE+RS +HP Y GR +V +A Sbjct: 12 EDVSNIIAMEHVNITVPDQAIATLFYVNGLGLT----RDPYIDFGPSNVWINAGKQQFHLPTKKPQVIRGHIGLVVPDLKALAKRLHSV--EKRLTDTRFSFTS-AKEFISVTCPWGNKLKCYGS-----GKRFNMR-----------LGIPYVEFLVPRGTARGIARFYEDLFSCRTTLT------------KTSCQIAVGRGQSLRFKENEQKLD----YDGHHIAIYVSN--FSTPHQYLDHHGLI--------------TEESDAHQYRFQTIIDPSTGQELFDVEHEVRSLHHPMY--GRFLVNRNA 266 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig670.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig670.1.2 >prot_C-tenellus_contig670.1.2 ID=prot_C-tenellus_contig670.1.2|Name=mRNA_C-tenellus_contig670.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=321bp MPFESTWEEDSSGFHHLEHVNINMPEHGPITQLYFDTLLFAPDSRRSQNIback to top mRNA from alignment at C-tenellus_contig670:2516..7308+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig670.1.2 ID=mRNA_C-tenellus_contig670.1.2|Name=mRNA_C-tenellus_contig670.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4793bp|location=Sequence derived from alignment at C-tenellus_contig670:2516..7308+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig670:2516..7308+ >mRNA_C-tenellus_contig670.1.2 ID=mRNA_C-tenellus_contig670.1.2|Name=mRNA_C-tenellus_contig670.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=963bp|location=Sequence derived from alignment at C-tenellus_contig670:2516..7308+ (Choristocarpus tenellus KU2346)back to top |