mRNA_C-tenellus_contig6687.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig6687.2.1
Unique NamemRNA_C-tenellus_contig6687.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig6687.2.1 vs. uniprot
Match: D7FX27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX27_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 3.930e-125
Identity = 259/506 (51.19%), Postives = 306/506 (60.47%), Query Frame = 1
Query:   61 ASIPATFCKPGRLDRCVEISPPTQASREGILRLLLK---GQGADTLEQLG-----------PP----SGSVLGLESRSGSDVTVHKGAAAPAHTMAFAPGG-GVDRDELGDKDLDSS--------------AVLVTWAERLSILTPGFVGGDLTRLIEAARAHAFRRRQRERGVEVVSAQDSETTVPPLGPMLLWTDALMAVAEIVPRSLLGVEVSSS--------------RRDLTWEAVGGYGVAKDRLQRLVQWPWQHPEAFARMGISAPSGALLYGPSGCGKSLFAQVLASECLANFVWVRSSELFSRYLGESEERFRSLFAKARAAAPCILFLDELDAITAKRDDPSTPGSDADD---GGVHSRVLSTLLNEMDGVATSSSRREGSKGKGAGGRTSSGVGGCGVLVLAATNRREALDAALLRPGRLQESILLDLPSGEDRLGVLRVHAGRLPLGV-GVDLERLSREDLSGGMSCSDLEATCREAAMMALREDLEGATEVKS 1425
            A++PA F KPGR DRCV I PPTQA REGIL ++L    G     LE L            PP    SG  + + SR   D+   +           A GG G  R   G  +  +               A+   WA+RLS LTPG VGGDL RL+  ARA +      +RG ++   Q   TT P     L+W D + AVA  VPRSL G++V+S+               R  TW +VGG+  AK RLQRLVQWPW HPEAFARMG+SAP+GALLYGPSGCGKSL AQVLA+ECLANF+WVRSSEL SRYLGE+E + R+LF++ARAAAPCILFLDELDAITAKR D             G VH+RVLSTLLNEMDGVA+                             AATNRR ALDAALLRPGRL ES+ L  P  EDR GVLRVHAGRLP G  G+DL RLS++D+SGG++C+DLEA CREAAMMA+REDL GA E+ +
Sbjct:  513 AALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTVAGAAELELEPLSTALQARPIAGSPPDEMSSGKPVVIASRDAPDLEPEREPRTIFADKDDARGGRGEGRGSSGRAERKTXXXXXXXXXXXXXXXAIAEEWAKRLSSLTPGMVGGDLERLVRTARARSL-----QRGRDLAGQQ---TTQPSPPRFLMWEDVMAAVAITVPRSLQGLDVASAGSXXXXXXXXXXXXXRGPTWRSVGGFSKAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRGDGGXXXXXXXXXXXGSVHARVLSTLLNEMDGVASGXXXXXXXXXX----XXXXXXXXXXXXXXAATNRRGALDAALLRPGRLHESVELGFPGREDREGVLRVHAGRLPRGAAGIDLARLSQDDVSGGLTCADLEAACREAAMMAMREDLHGAREMSA 1006          
BLAST of mRNA_C-tenellus_contig6687.2.1 vs. uniprot
Match: A0A7S2GUQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUQ8_9STRA)

HSP 1 Score: 234 bits (597), Expect = 7.560e-67
Identity = 156/391 (39.90%), Postives = 212/391 (54.22%), Query Frame = 1
Query:  235 RSGSDVTVHKGAAAPAHTMAFAPGGGVDRDELGDKDLDSSAVLVTWAERLSILTPGFVGGDLTRLIEAARAHAFR-RRQRERGVEVVSAQDSETTVPPLGPMLLWTDALMAVAEIVPRSLLGVEVSS----SRRDLTWEAVGGYGVAKDRLQRLVQWPWQHPEAFARMGISAPSGALLYGPSGCGKSLFAQVLASECLANFVWVRSSELFSRYLGESEERFRSLFAKARAAAPCILFLDELDAITAKRDDPSTPGSDADDGGVHSRVLSTLLNEMDGVATSSSRREGSKGKGAGGRTSSGVGGCGVLVLAATNRREALDAALLRPGRLQESILLDLPSGEDRLGVLRVHAGRLPLGVGVDLERLSREDLSGGMSCSDLEATCREAAMMALR 1392
            R   D  + KG+++P      A   G DR                 A  L+ +TPG V GDL +L +AA+  A    R    GVE                   W   L A+  + P+ L  ++V S    +R  + W+++ GY   KDRL+R++  PW++PE + +M + A SG +L GPSGCGKSL AQVLA+E  ANF+WV+SSEL S++LGESE + RSLF +AR AAP ILFLDE+DA+  +       GS+     V SR+L+TLLNE+DG+  ++S+                     VLVLAATNR E LDAALLRPGRL E + L LPS  DR+ VL      L L   VDL+ L+   +  G +C+ L +  R+A + ALR
Sbjct:    1 RDDDDDEIRKGSSSPGSNEVMADNSGADRKSR--------------AWELAEMTPGMVIGDLVQLCDAAQMEAMDLERSCSGGVE-------------------WKHLLRALETVPPQQLRELDVRSGQAMAREGICWDSIAGYDAVKDRLRRVIAGPWENPELYEQMSLGAVSGVVLTGPSGCGKSLTAQVLAAEIRANFIWVKSSELLSKWLGESERQLRSLFDRARKAAPAILFLDEVDALVGRG-----KGSN-----VASRLLTTLLNELDGIKGTTSQSR-------------------VLVLAATNRIEVLDAALLRPGRLSEIVELGLPSVTDRVAVLEHATKGLRLSSDVDLKDLASSKV--GATCAGLMSLSRDAGLAALR 327          
BLAST of mRNA_C-tenellus_contig6687.2.1 vs. uniprot
Match: A0A662JR15_9CREN (AAA family ATPase (Fragment) n=1 Tax=Thermoprotei archaeon TaxID=2250277 RepID=A0A662JR15_9CREN)

HSP 1 Score: 234 bits (596), Expect = 5.430e-65
Identity = 141/352 (40.06%), Postives = 201/352 (57.10%), Query Frame = 1
Query:  376 ERLSILTPGFVGGDLTRLIEAARAHAFRRRQRERGVEVVSAQDSETTVPPLGPMLLWTDALMAVAEIVPRSLLGVEVSSSRRDLTWEAVGGYGVAKDRLQRLVQWPWQHPEAFARMGISAPSGALLYGPSGCGKSLFAQVLASECLANFVWVRSSELFSRYLGESEERFRSLFAKARAAAPCILFLDELDAITAKRDDPSTPGSDADDGGVHSRVLSTLLNEMDGVATSSSRREGSKGKGAGGRTSSGVGGCGVLVLAATNRREALDAALLRPGRLQESILLDLPSGEDRLGVLRVHAGRLPLGVGVDLERLSREDLSGGMSCSDLEATCREAAMMALREDLEGATEVKSEH 1431
            ++L+ +T GF G DL  L   A  HA RR   +  +++ + + SE  +  +   +   D + A  EI P +L  +E+     ++ W+ +GG    K  L+  V+WP ++P+AF RMGI  P G LLYGP GCGK+L A+ +A+E  ANF++V+  E+FS+++GESE+  R +F KAR AAPC++F DE+DAI   R      G +  D  V  RV++ LL EMDG+                          GV+V+ ATNR + LD ALLRPGR    I +  P  + RL +L++H   +PL   VDLE L+R   + G + SDLEA CREAAMMALRED+  A  V+  H
Sbjct:  126 DKLAEITHGFTGADLAALCREAAMHALRRYLPK--IDLETEKISEEVLENI--KVTMEDFMAAFREITPTALREIEIEVP--NVRWDDIGGLDDVKQELRETVEWPLKYPDAFRRMGIKPPKGILLYGPPGCGKTLLAKAVATESEANFIYVKGPEVFSKWVGESEKAIREVFRKARMAAPCVIFFDEIDAIAPVR------GFEYGDAAVTQRVVAQLLTEMDGIEKLE----------------------GVVVIGATNRPDILDPALLRPGRFDRIIYVPPPDLKARLEILKIHTRSMPLADDVDLEELARR--TEGYAGSDLEALCREAAMMALREDI-NAVVVRMRH 440          
BLAST of mRNA_C-tenellus_contig6687.2.1 vs. uniprot
Match: A0A497GSE6_9CREN (AAA family ATPase n=1 Tax=Thermoprotei archaeon TaxID=2250277 RepID=A0A497GSE6_9CREN)

HSP 1 Score: 234 bits (597), Expect = 7.420e-63
Identity = 141/352 (40.06%), Postives = 201/352 (57.10%), Query Frame = 1
Query:  376 ERLSILTPGFVGGDLTRLIEAARAHAFRRRQRERGVEVVSAQDSETTVPPLGPMLLWTDALMAVAEIVPRSLLGVEVSSSRRDLTWEAVGGYGVAKDRLQRLVQWPWQHPEAFARMGISAPSGALLYGPSGCGKSLFAQVLASECLANFVWVRSSELFSRYLGESEERFRSLFAKARAAAPCILFLDELDAITAKRDDPSTPGSDADDGGVHSRVLSTLLNEMDGVATSSSRREGSKGKGAGGRTSSGVGGCGVLVLAATNRREALDAALLRPGRLQESILLDLPSGEDRLGVLRVHAGRLPLGVGVDLERLSREDLSGGMSCSDLEATCREAAMMALREDLEGATEVKSEH 1431
            ++L+ +T GF G DL  L   A  HA RR   +  +++ + + SE  +  +   +   D + A  EI P +L  +E+     ++ W+ +GG    K  L+  V+WP ++P+AF RMGI  P G LLYGP GCGK+L A+ +A+E  ANF++V+  E+FS+++GESE+  R +F KAR AAPC++F DE+DAI   R      G +  D  V  RV++ LL EMDG+                          GV+V+ ATNR + LD ALLRPGR    I +  P  + RL +L++H   +PL   VDLE L+R   + G + SDLEA CREAAMMALRED+  A  V+  H
Sbjct:  381 DKLAEITHGFTGADLAALCREAAMHALRRYLPK--IDLETEKISEEVLENI--KVTMEDFMAAFREITPTALREIEIEVP--NVRWDDIGGLDEVKQELRETVEWPLKYPDAFRRMGIKPPKGILLYGPPGCGKTLLAKAVATESEANFIYVKGPEVFSKWVGESEKAIREVFRKARMAAPCVIFFDEIDAIAPVR------GFEYGDAAVTQRVVAQLLTEMDGIEKLE----------------------GVVVIGATNRPDILDPALLRPGRFDRIIYVPPPDLKARLEILKIHTRSMPLADDVDLEELARR--TEGYAGSDLEALCREAAMMALREDI-NAVVVRMRH 695          
BLAST of mRNA_C-tenellus_contig6687.2.1 vs. uniprot
Match: A0A836CCE4_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE4_9STRA)

HSP 1 Score: 238 bits (607), Expect = 4.110e-62
Identity = 184/470 (39.15%), Postives = 224/470 (47.66%), Query Frame = 1
Query:  274 APAHTMAFAPGGGVDRDELGDKDLDSSAVLVTWAERLSILTPGFVGGDLTRLIEAARAHAFRRRQRERGVEV-----------------------VSAQDSETTVPPLGPMLLWTDALMAVAEIVPRSLLGVE---VSSSRRDLT---WEAVGGYGVAKDRLQRLVQWPWQHPEAFARMGISAPSGALLYGPSGCGKSLFAQVLASECLANFVWVRSSELFSRYLGESEERFRSLFAKARAAAPCILFLDELDAITAKRDDPSTPGSDADDGGVHSRVLSTLLNEMDGVATSSSRREGSKGKGAGGRTSSGVGGCG-VLVLAATNRREALDAALLRPGRLQESILLDLPSGEDRLGVLRVHAGRLPL-------------------------------------------------GVGVDLERLSREDLSGGMSCSDLEATCREAAMMALREDLEGATEVKSEHLIRAL 1446
            A A   A+   GG    + GD +  + A    WA RL+  TPGF GGD  RL+ AARA A  RR    G                           S  D+E         L W+D   A+A + P  L GVE   + S  R      W  VGGY   K+RL RL            RM +++ SGALL GPSGCGK+L A  LA EC ANF+ VRSS L S Y GESEE  R LF +ARAAAP ILFLDE+DA+TA R           D  V  R+LSTLLNEMDGV                       GG G VLVL ATNR EA+D+ALLRPGRL E++ + +P  +DRL +LR++  R+PL                                                      L+ L+ + +SGGM+C+ LEA CREAAMMALRED+E  T V   HL +AL
Sbjct: 1354 ADAPQTAYVNSGG----DGGDSEEGAEA---RWAGRLADATPGFTGGDARRLLRAARAEAQARRHARGGASCDXXXXXXXXXXXXXXXXXXXSRRTSDGDAE---------LCWSDLEHALARVAPSELQGVEGGVLPSGGRGXXXXXWGTVGGYQGVKERLARL------------RMSLTSVSGALLEGPSGCGKTLVAHALAGECRANFIAVRSSGLLSPYFGESEENVRRLFRRARAAAPSILFLDEIDALTAARGASXXXXXXXXDE-VQLRLLSTLLNEMDGVGH--------------------AGGDGRVLVLGATNRPEAIDSALLRPGRLHEAVHIGMPDAQDRLDILRLYTSRMPLRSEGGDIFKVEVAXXXXXXXXXXXXXSPDHQAQIVAGXXXXXGKQPHAEAANAVLQELASDGVSGGMTCAGLEAACREAAMMALREDME-CTSVSIAHLKQAL 1773          
BLAST of mRNA_C-tenellus_contig6687.2.1 vs. uniprot
Match: A0A497FDD9_9CREN (AAA family ATPase n=1 Tax=Thermoprotei archaeon TaxID=2250277 RepID=A0A497FDD9_9CREN)

HSP 1 Score: 231 bits (588), Expect = 1.200e-61
Identity = 156/376 (41.49%), Postives = 205/376 (54.52%), Query Frame = 1
Query:  334 DKDLDSSAVLVTWAERLSILTPGFVGGDLTRLIEAARAHAFRRRQRERGVEVVSAQDSETTVPPLGPMLLWT--DALMAVAEIVPRSL--LGVEVSSSRRDLTWEAVGGYGVAKDRLQRLVQWPWQHPEAFARMGISAPSGALLYGPSGCGKSLFAQVLASECLANFVWVRSSELFSRYLGESEERFRSLFAKARAAAPCILFLDELDAITAKRDDPSTPGSDADDGGVHSRVLSTLLNEMDGVATSSSRREGSKGKGAGGRTSSGVGGCGVLVLAATNRREALDAALLRPGRLQESILLDLPSGEDRLGVLRVHAGRLPLGVGVDLERLSREDLSGGMSCSDLEATCREAAMMALREDLEGATEVKSEHLIRALE 1449
            DKD+D          +L+ +T GF G DL  L   A   A RR      V      D ET  P +   L  T  D L A+ EI P +L  + VEV S R    W  +GG    K +L+  V+WP ++PEAF RMGI  P G LLYGP GCGK+L A+ +A+E  ANF+ ++  E+FS+++GESE   R +F KAR AAPC++F+DE+DAI   R      G    D GV  RV+STLL EMDG+     R E                   V+V+AATNR + LD ALLRPGR    I +  P  + RL +L++H   +PL   VDLE L+R   + G S +DLE  CREA ++ALRE++  A  V   H   AL+
Sbjct:  369 DKDVD--------LRKLAEVTHGFTGADLAALCREAAMRALRR------VLPKINLDEETIPPEVLENLRVTMQDFLDALKEITPSALREIAVEVPSVR----WSDIGGLEEVKQQLREAVEWPLKYPEAFKRMGIKPPKGILLYGPPGCGKTLLAKAVATESGANFIAIKGPEVFSKWVGESERAIREVFRKARMAAPCVVFIDEIDAIAPMR------GLGYADSGVTERVVSTLLTEMDGIE----RLE------------------NVVVIAATNRPDILDPALLRPGRFDRLIYVPPPDYKARLEILKIHTRNMPLDKDVDLEELARR--TDGYSGADLELLCREAGLLALRENI-NADRVSWRHFEEALK 695          
BLAST of mRNA_C-tenellus_contig6687.2.1 vs. uniprot
Match: A0A7S2RHQ3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RHQ3_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.810e-61
Identity = 137/287 (47.74%), Postives = 175/287 (60.98%), Query Frame = 1
Query:  562 AVAEIVPRSLLGVEVSSSRRDLT---WEAVGGYGVAKDRLQRLVQWPWQHPEAFARMGISAPSGALLYGPSGCGKSLFAQVLASECLANFVWVRSSELFSRYLGESEERFRSLFAKARAAAPCILFLDELDAITAKRDDPSTPGSDADDGGVHSRVLSTLLNEMDGVATSSSRREGSKGKGAGGRTSSGVGGCGVLVLAATNRREALDAALLRPGRLQESILLDLPSGEDRLGVLRVHAGRLPLGVGVDLERLSREDLSGGMSCSDLEATCREAAMMALREDLEGAT 1413
            A   I P  L  ++VSS     T   W+ +GGY   K RL  L+ W W +  A  RMGI+A SG +L+GP+GCGK+LFA  LASE   NFV V++SEL S YLGESE   R LFA+AR A+PCILFLDELDA+  KR   +  G D  DG V +RVL+TLLNEMDGV+ S                       GV+VLAA+NR E +DAALLRPGRL  ++ + LP  ED + VLR     +PL   VD+E +++  +  G SC+ L+  C EAAM+A+RE +E  T
Sbjct:  449 AAQYIRPSQLAILDVSSRNISTTAGKWKGIGGYESVKRRLTELIHWQWNNKNATVRMGITAVSGIILHGPTGCGKTLFANCLASESKCNFVSVKASELLSMYLGESERLIRQLFARARKASPCILFLDELDALATKR---NLEGGDNVDG-VGNRVLATLLNEMDGVSDSQ----------------------GVIVLAASNRYENIDAALLRPGRLGSAVFIPLPGTEDCINVLRTCCAEIPLDPAVDIELIAQRMV--GASCAALQGLCTEAAMLAMREAIETDT 707          
BLAST of mRNA_C-tenellus_contig6687.2.1 vs. uniprot
Match: A0A662TI77_9ARCH (AAA family ATPase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A662TI77_9ARCH)

HSP 1 Score: 223 bits (567), Expect = 1.960e-61
Identity = 147/359 (40.95%), Postives = 193/359 (53.76%), Query Frame = 1
Query:  379 RLSILTPGFVGGDLTRLIEAARAHAFRRRQRERGVEVVSAQDSETTVPP--LGPMLLWTDALM-AVAEIVPRSLLGVEVSSSRRDLTWEAVGGYGVAKDRLQRLVQWPWQHPEAFARMGISAPSGALLYGPSGCGKSLFAQVLASECLANFVWVRSSELFSRYLGESEERFRSLFAKARAAAPCILFLDELDAITAKRDDPSTPGSDADDGGVHSRVLSTLLNEMDGVATSSSRREGSKGKGAGGRTSSGVGGCGVLVLAATNRREALDAALLRPGRLQESILLDLPSGEDRLGVLRVHAGRLPLGVGVDLERLSREDLSGGMSCSDLEATCREAAMMALREDLEGATEVKSEHLIRAL 1446
            +++ +T GFVG DL  L   A   A RR   +  +E       E ++PP  L  + +  D  M A  EI P +L  VE+      + WE VGG    K  L+  V+WP ++PE+F R+GI  P G LLYGP GCGK+L A+ +A+E  ANFV V+  E+FS+++GESE   R +F KAR  APC++FLDE+DAI   R      G    D  V  RV+S LL EM G+                          GV+V+ ATNR + LD ALLRPGRL   I +  P    RL +L++H   +PL   VDLE L+R   + G S SDLE   REA MMALRED+     V+  H   AL
Sbjct:   75 KVAEITHGFVGADLAALCREAAMKALRRYLPKIDLE-------EESIPPEVLDSIEVTMDDFMRAFREITPTALREVEIEIP--SVRWEDVGGLYDVKQELREAVEWPLKYPESFKRLGIKPPKGILLYGPPGCGKTLLAKAVATESGANFVAVKGPEIFSKWVGESERAIREIFRKARQVAPCVVFLDEVDAIAPMR------GMSIGDSMVTERVVSQLLTEMSGIENLE----------------------GVVVIGATNRPDILDPALLRPGRLDRLIYVPPPDFMSRLEILKIHTRNMPLAEDVDLEELARA--TEGYSGSDLEVLVREAGMMALREDI-NTENVRMRHFREAL 393          
BLAST of mRNA_C-tenellus_contig6687.2.1 vs. uniprot
Match: A0A6A3K5S7_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3K5S7_9STRA)

HSP 1 Score: 232 bits (591), Expect = 2.360e-61
Identity = 171/453 (37.75%), Postives = 239/453 (52.76%), Query Frame = 1
Query:   58 DASIPATFCKPGRLDRCVEISPPTQASREGILRLLLKGQGADTLEQLGPPSGSVLGLESRSGSDVTVHKGAAAPAHTMAFAPGGGVDRDELGDKDLDSSAVLVTWAERLSILTPGFVGGDLTRLIE--AARAHAFRRRQRERGVEVVSAQDSETTVPPLGPMLLWTDALMAVAEIVPRSLLGVEVSSSRRDLTWEAV-GGYGVAKDRLQRLVQWPWQHPEAFARMGISAPSGALLYGPSGCGKSLFAQVLASECLANFVWVRSSELFSRYLGESEERFRSLFAKARAAAPCILFLDELDAITAKRDDPSTPGSDADDGGVHSRVLSTLLNEMDGVATSSSRREGSKGKGAGGRTSSGVGGCGVLVLAATNRREALDAALLRPGRLQESILLDLPSGEDRLGVLRVHAGRLPLGVGVDLERLS-REDLSGGMSCSDLEATCREAAMMALREDLE 1404
            DA++P    + GR  + +++  PT+ SR  ILR  L                  +GL  R+  + +V                        GD   D+ ++    A RL+ LT G+V  DL R+    AA+AHA                DS      L P + WT+ L A  ++ P  L  + V+S    +  + V  GY   + +L   V W +   +A  R+GIS  SG LL GPSGCGK+L  Q LA++   NFV V+SSEL S+Y G+SE+  R LFA+ARAAAPCILF DE D+I  KR      G  +  GGV++RVLST LNEMDGV   S R   S    A G ++S  GG  +LV+AATNR+ ALDAAL+RPGR+ +++ L  P+ ED   +  ++  ++PL   VD++ L+ R   S   + +D+ ATC+EAA  ALRED+E
Sbjct:  427 DANVPLAAKRTGRFGKVLDLVVPTEHSRREILRRHL------------------IGLPLRNDEETSV------------------------GD---DAGSL----ASRLASLTGGYVAKDLVRICRNAAAQAHA----------------DSIDNGGSLKPSVGWTELLHAQQQVKPSQLRELNVASPGAPVDGKLVFAGYAAVQKQLFDFVSWKFHPTDAMNRLGISNASGILLSGPSGCGKTLLVQTLAAKAQVNFVSVKSSELLSKYFGDSEKAVRQLFARARAAAPCILFFDEFDSIAHKRSFGEGDGGSSG-GGVYARVLSTFLNEMDGVG--SQRVTTSSVSHAKGSSASESGG--ILVIAATNRKNALDAALIRPGRIDKTVELGFPTQEDIQEIFTLYTRKMPLAADVDIQALAERPRGSRAFTGADIAATCKEAAFRALREDIE 809          
BLAST of mRNA_C-tenellus_contig6687.2.1 vs. uniprot
Match: A0A7J2LS97_9ARCH (AAA family ATPase n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7J2LS97_9ARCH)

HSP 1 Score: 229 bits (584), Expect = 5.080e-61
Identity = 142/348 (40.80%), Postives = 199/348 (57.18%), Query Frame = 1
Query:  376 ERLSILTPGFVGGDLTRLIEAARAHAFRRRQRERGVEVVSAQDSETTVPPLGPMLLWT------DALMAVAEIVPRSLLGVEVSSSRRDLTWEAVGGYGVAKDRLQRLVQWPWQHPEAFARMGISAPSGALLYGPSGCGKSLFAQVLASECLANFVWVRSSELFSRYLGESEERFRSLFAKARAAAPCILFLDELDAITAKRDDPSTPGSDADDGGVHSRVLSTLLNEMDGVATSSSRREGSKGKGAGGRTSSGVGGCGVLVLAATNRREALDAALLRPGRLQESILLDLPSGEDRLGVLRVHAGRLPLGVGVDLERLSREDLSGGMSCSDLEATCREAAMMALREDL 1401
            ++L+ +T GFVG D+  L+  A  HA RR  RE  +++ S +       P+   LL        D + A+ EI P +L   E+ +   ++ W  +GG    K +LQ +++WP ++PEAF RMGI  P G LLYGP GCGK+L A+ +A+E  ANF+ V+  EL S+++GESE   R +F KAR A+P I+F DE+DA+  +R      G    D GV  RV+S LL EMDG+         S+G               V+V+AATNR + LD ALLRPGR    I +  P    RL +LRVH  ++PL   VDLER++R  ++ G + +DL A  REAAM ALR D+
Sbjct:  381 KKLAEMTHGFVGADIAALVREAAMHALRRFLREYNIDINSQE-------PIPEELLQNLKVSMKDFMAALKEIRPSALR--EIYAEIPNVRWSDIGGLEDVKRQLQEVIEWPLKYPEAFERMGIEPPKGVLLYGPPGCGKTLLAKAVATESEANFISVKGPELLSKWVGESERAVREIFRKARQASPAIIFFDEIDALAPRR------GLYTGDSGVSERVISQLLTEMDGLQ--------SRGD--------------VVVIAATNRPDLLDPALLRPGRFDRLIYVPPPDLRARLEILRVHTRKMPLASDVDLERIAR--MTEGYTGADLAAVAREAAMNALRRDI 689          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6687.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX27_ECTSI3.930e-12551.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2GUQ8_9STRA7.560e-6739.90Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A662JR15_9CREN5.430e-6540.06AAA family ATPase (Fragment) n=1 Tax=Thermoprotei ... [more]
A0A497GSE6_9CREN7.420e-6340.06AAA family ATPase n=1 Tax=Thermoprotei archaeon Ta... [more]
A0A836CCE4_9STRA4.110e-6239.15Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A497FDD9_9CREN1.200e-6141.49AAA family ATPase n=1 Tax=Thermoprotei archaeon Ta... [more]
A0A7S2RHQ3_9STRA1.810e-6147.74Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A662TI77_9ARCH1.960e-6140.95AAA family ATPase (Fragment) n=1 Tax=archaeon TaxI... [more]
A0A6A3K5S7_9STRA2.360e-6137.75Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A7J2LS97_9ARCH5.080e-6140.80AAA family ATPase n=1 Tax=Candidatus Bathyarchaeot... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6687contigC-tenellus_contig6687:2764..7108 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FX27
PFAMsAAA
Model size2336
Max annot lvl2759|Eukaryota
KEGG koko:K13525,ko:K14571,ko:K14575
KEGG TC3.A.16.1
KEGG Pathwayko03008,ko04141,ko05134,map03008,map04141,map05134
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.44e-119
EggNOG OGsCOG0464@1|root,KOG0730@2759|Eukaryota,KOG0733@2759|Eukaryota
Descriptionpreribosome binding
Cds size1221
COG categoryO
BRITEko00000,ko00001,ko00002,ko03009,ko03019,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6687.2.1prot_C-tenellus_contig6687.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig6687 3591..6820 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789985.0288837-UTR-C-tenellus_contig6687:2763..35901680789985.0288837-UTR-C-tenellus_contig6687:2763..3590Choristocarpus tenellus KU2346UTRC-tenellus_contig6687 2764..3590 -
1680789985.093484-UTR-C-tenellus_contig6687:6820..71081680789985.093484-UTR-C-tenellus_contig6687:6820..7108Choristocarpus tenellus KU2346UTRC-tenellus_contig6687 6821..7108 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789985.0442603-CDS-C-tenellus_contig6687:3590..36831680789985.0442603-CDS-C-tenellus_contig6687:3590..3683Choristocarpus tenellus KU2346CDSC-tenellus_contig6687 3591..3683 -
1680789985.0570989-CDS-C-tenellus_contig6687:4046..41061680789985.0570989-CDS-C-tenellus_contig6687:4046..4106Choristocarpus tenellus KU2346CDSC-tenellus_contig6687 4047..4106 -
1680789985.0699985-CDS-C-tenellus_contig6687:5192..56941680789985.0699985-CDS-C-tenellus_contig6687:5192..5694Choristocarpus tenellus KU2346CDSC-tenellus_contig6687 5193..5694 -
1680789985.0802925-CDS-C-tenellus_contig6687:6254..68201680789985.0802925-CDS-C-tenellus_contig6687:6254..6820Choristocarpus tenellus KU2346CDSC-tenellus_contig6687 6255..6820 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig6687.2.1

>prot_C-tenellus_contig6687.2.1 ID=prot_C-tenellus_contig6687.2.1|Name=mRNA_C-tenellus_contig6687.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=407bp
MAFAPGGGVDRDELGDKDLDSSAVLVTWAERLSILTPGFVGGDLTRLIEA
ARAHAFRRRQRERGVEVVSAQDSETTVPPLGPMLLWTDALMAVAEIVPRS
LLGVEVSSSRRDLTWEAVGGYGVAKDRLQRLVQWPWQHPEAFARMGISAP
SGALLYGPSGCGKSLFAQVLASECLANFVWVRSSELFSRYLGESEERFRS
LFAKARAAAPCILFLDELDAITAKRDDPSTPGSDADDGGVHSRVLSTLLN
EMDGVATSSSRREGSKGKGAGGRTSSGVGGCGVLVLAATNRREALDAALL
RPGRLQESILLDLPSGEDRLGVLRVHAGRLPLGVGVDLERLSREDLSGGM
SCSDLEATCREAAMMALREDLEGATEVKSEHLIRALEGRRAGRLRMQRFT
FSVGSA*
back to top

mRNA from alignment at C-tenellus_contig6687:2764..7108-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig6687.2.1 ID=mRNA_C-tenellus_contig6687.2.1|Name=mRNA_C-tenellus_contig6687.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4345bp|location=Sequence derived from alignment at C-tenellus_contig6687:2764..7108- (Choristocarpus tenellus KU2346)
GGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGAGGGGGGGGGGGGGGG GGGGGTAGATGCCTCTATTCCTGCAACCTTCTGCAAGCCTGGACGCTTAG ACCGCTGTGTGGAGATATCCCCGCCCACTCAGGCCAGCCGAGAGGGTATC TTGAGATTGCTCCTCAAGGGTCAGGGTGCTGATACACTTGAGCAACTGGG CCCACCCTCAGGGTCTGTTTTGGGTCTGGAGTCCAGATCTGGCTCTGATG TGACTGTGCATAAAGGAGCTGCTGCCCCAGCACACACAATGGCCTTTGCT CCTGGTGGAGGTGTAGATAGGGATGAGTTGGGGGATAAGGATTTAGATAG CAGTGCTGTCTTGGTGACCTGGGCGGAAAGGCTTAGCATACTCACCCCAG GGTTTGTGGGAGGAGACTTGACAAGGCTCATTGAGGCAGCACGGGCACAT GCCTTCCGTCGCCGCCAAAGGGAACGTGGTGTTGAGGTTGTCTCAGCCCA GGATTCAGAGACTACGGTCCCTCCCTTGGGACCTATGTTGTTATGGACAG ATGCTCTCATGGCTGTTGCGGAAATAGTGCCTCGGTCGCTGCTGGGTGTA GAAGTGTCTTCTTCCCGCCGCGACCTGACCTGGGAGGCAGTGGGGGGTTA CGGGGTGGCCAAGGATCGGCTTCAGCGATTGGTACAGTGGCCATGGCAAC ATCCGGAGGCGTTTGCACGAATGGGAATCTCAGCCCCTTCAGGTGCACTC CTCTACGGTCCCAGTGGGTGTGGGAAGAGCCTGTTTGCTCAGGTGCTGGC ATCGGAGTGCCTGGCCAACTTCGTTTGGGTGAGATCATCAGAGCTGTTCT CAAGGTGAGGTGTAATACTTGCTATTGCTTTTTTCTTGTAATGAGTTTAC GGAAGAGGAAGAGAGGAGTCATGAGCTCGCACCTAATTGCTGTAGTTACA CTCAACTGATGTAAATGCTTAGCTCCTTGATGAACGGAGTAGAGGAGTTG GACAAGGGGTGGCAATATTCGCTCAGTCTTTATATGTGGGGCGAAGTCAG TGTGAATAGGGGGTCGAAGGGAGAGGATTTTTTTGTTGTTTTTTGTTTGA GGTTAGGGTTAGGATTGCACACCGAATATGGTATGCCCTCCCTGAAAAGG TATTCAGGAAGTTGAAGTTACCTTAACAACTCCTCGTGGAGAGCCAGTGC CATCAATCCTTTGCGGACCGCTGGGACGAAATTCTCCTTGTCTACCATCC AGCCCACTCCATACCTTGCCATTTGCACATCAGCTCTGGCTCTTCTGCTC CTGACCGCTCCATTGATTCAGGATGCCCTAATCCCCCGATCCCTGGTTGT TCTTGCTGTCTCTCGCAACTCTTCAAACCCCCATAAAATAAATGTATCAA CGAAATAACATCAGGTACCTGGGAGAGTCTGAAGAGAGGTTCCGCTCCCT CTTTGCCAAGGCTCGTGCAGCAGCGCCCTGCATTCTCTTCCTAGACGAGC TCGATGCCATCACCGCCAAGAGGGACGACCCATCTACCCCCGGGAGTGAT GCAGATGATGGAGGTGTCCATTCCCGCGTCCTGAGTACCCTGCTCAATGA GATGGATGGTGTGGCAACCTCCTCTTCCCGACGGGAAGGAAGTAAGGGTA AGGGGGCGGGTGGGAGGACGAGCAGCGGTGTTGGAGGATGTGGAGTCCTT GTTCTTGCAGCAACAAATCGCCGGGAAGCACTGGACGCTGCACTTTTGCG CCCAGGACGCCTCCAGGAGAGTATTTTGCTGGACTTGCCTTCGGGGGAGG ATCGCCTGGGTGTGCTACGGGTGCATGCAGGACGCCTTCCACTTGGGGTT GGAGTGGACCTGGAGAGACTCAGCCGGGAAGATCTTTCGGGAGGAATGAG CTGTTCTGATTTAGAGGTATTTTGCCGCTTGTGATTGGGGGGTCTGGGTT GAGATTAGGGGCTGGGGTAGGGTACATCTGCCTAGCTTGAGGTACAGGCT TTTTTTTGCCGTGATGTGGGGGGTGGTTGAAGGAGGAGAGACTGGGGGTA GGGCAAAAAAAGGGACTTTGCATGCTTCAACCAATGCGTAGACAGTTTTT CTTGAACGGGCTTCCTTTCCCCCCCTTTCCTTGGGTGACGACGTATGTTT ATTTGTTTCTTACTGTGGCTCGTTGGGGTTGTAAGAAAAACAAAAAGAAA GAAAGTGAAGCACCAGTTGACTGCTGAGATAGGTTGTGCCTGCAATCACG ATATTTTGTTGTTATCATTAGTGTTGTGATATTATTAGAGGACAGTTTCA AGTGAGATGCACTATGTAGTCCCATGAAGCTCAGGCTTCGTTATTTTTCC ATCTGTTTGTCGAAGAAATCCTGTTGTGTCAAACTCATCATCTGTACAAG TAGAAGGCTTATCTCCCAGCAAGGACTTTTAAGAAAAAGGAAGGGTAGGG CATGAGCACTGAAGGCATCTTTCGAAGACAATCTCCACCCCTAGATCATC AGTACAGGTGCAAAATAGCACACTGTGCATTTGGGTAGGGCAGGGAAGTG GATCTTTGCAACTTTGCGTCACTATTTATTGTAATCGACGTTTTGAATAG GTTTTCAGTTTAGTCGGCAGTATGGTATGACAAGAACAAAACTGTTGGCG GTATATGTGGAATTGCTCCTACCGTTCAGCATAAATGGGTATCACCATTC CACTCTGCAGACTGTCAATTTCCAAGGCAACTGAAAGCGGGAACACACTG GAATAGTTGGTGGCCAACCTGTGAAAATTCTTCTGTGAATGAAAAAGAAT TCTTGTATTGTAGGTGATCTCTTGGCTTGATCCTTGAAGGTCTTTGACTC TGCGTTCTACTGACCTCATGGTTGTTCTGCTATGATCTCTTCTCCCCGTT GCATGGATCACACATCCTGAAAGTGGCCATGATGCATGGGCTGGACTCCA CTGTCTGTTTGGTGACTGACTTGTTCTTGTTCCCTTTTGTCTTGCTGGTC AGGCCACTTGCCGTGAGGCTGCAATGATGGCACTGAGGGAAGACCTGGAG GGTGCAACCGAGGTAAGAAAGTGAGGTGGTATAAACGGCTCGTCTCTCAA TATATTTGCCCCTTCAAATCAGCCCCTGCTATGACTAACAGGATCTGAGC TTCGAACCTTACAGGACTTGGTCTCAACAGGAACAATCCATCAAATTTTG AGTTTTTGTTGTTGTTGTGAGGAAGCACCGCCTGGTTTGAAGATACTGAG CACATATTTCTGAGCACTTTAGTCAACTGATCGCAAACAAGCTGCAATAG GACTGCGGACTGCTAGCTAAATCATCAGTGCAGTTTTGTGAGCATTTCCC ATCCTCATCTCTGTGTGCTCTGGCCTGTTAATGTGGTGCACCCATCCCTC TCGATTGTCTTCCTTGTTGCTGCAGGTGAAGTCTGAACATCTCATACGTG CCCTAGAGGGTCGAAGAGCTGGGAGACTTCGAATGCAGCGATTCACCTTC TCTGTTGGTAGTGCATAGTAGGGTTACAGTTCCCCCTCACACAAATGAGT ACCAAATACCGATATCATGAGAATTGTTGTTGCAGGTTGATGTTGCCGAG CCCTCCTTGATACCTCTGACTCACCATCTTTTTCGTAGATCGTAGGGTTT CAGCACTGCTAAGATGCCAATGTTGTACATATTGTGGTCAAAGAAGTATT TTTGTCAGTTGCAGTCATTTGCTCTTGTTAGCCTTGTCAGTTGAAGTTAT GTTCTCCAGAATTTTGTAGAGACAGTATGATGTATATATAGTATTTTACG ATTTTAGTAGTATTTATAGTACTATGAACCTGAGGAAGTGGTTTGTTTTT CCAGTGATGGAGTGTGTGGTGAGTGCCATAGAGGGATGTGCCTGGGTTAG TAGAGGTGGTTGGGGCACCCTGTTCTACTCTGTGGCCATGTGATTTAAAC CTCCTGTATTATATTTCTTTTGTTATATTCAAAGCATCATAAGCTTTTCT CAGTTGACATCTTACTCCTATTACTTCAACAAGTCTAATCTAACCGCTGA AAATGATATATTTGTGTAGATCCAGGAGATCGTTGATTGCTTCGGCTTTT GTTCCCTTAGATGTGCATTGGTGAAAGGTGTGTGGATTTCATCAATGCTA TCATTGACAAACCGCATTACCACAGGGATAGGATGTGTTAATGTTGATTT ATTTAACCTTTTTGTAGTGACATAGTAGTGTATGTATGTCCCTGCAAATT AATTGGTTGAAATATCACTATGAGTACTGCAGCAGGACCGGAATCCACTT ATACTTGCATATCTGTGGGAGCACAATTAATGTGTCCAAATTTGC
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig6687:2764..7108-

>mRNA_C-tenellus_contig6687.2.1 ID=mRNA_C-tenellus_contig6687.2.1|Name=mRNA_C-tenellus_contig6687.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1221bp|location=Sequence derived from alignment at C-tenellus_contig6687:2764..7108- (Choristocarpus tenellus KU2346)
ATGGCCTTTGCTCCTGGTGGAGGTGTAGATAGGGATGAGTTGGGGGATAA
GGATTTAGATAGCAGTGCTGTCTTGGTGACCTGGGCGGAAAGGCTTAGCA
TACTCACCCCAGGGTTTGTGGGAGGAGACTTGACAAGGCTCATTGAGGCA
GCACGGGCACATGCCTTCCGTCGCCGCCAAAGGGAACGTGGTGTTGAGGT
TGTCTCAGCCCAGGATTCAGAGACTACGGTCCCTCCCTTGGGACCTATGT
TGTTATGGACAGATGCTCTCATGGCTGTTGCGGAAATAGTGCCTCGGTCG
CTGCTGGGTGTAGAAGTGTCTTCTTCCCGCCGCGACCTGACCTGGGAGGC
AGTGGGGGGTTACGGGGTGGCCAAGGATCGGCTTCAGCGATTGGTACAGT
GGCCATGGCAACATCCGGAGGCGTTTGCACGAATGGGAATCTCAGCCCCT
TCAGGTGCACTCCTCTACGGTCCCAGTGGGTGTGGGAAGAGCCTGTTTGC
TCAGGTGCTGGCATCGGAGTGCCTGGCCAACTTCGTTTGGGTGAGATCAT
CAGAGCTGTTCTCAAGGTACCTGGGAGAGTCTGAAGAGAGGTTCCGCTCC
CTCTTTGCCAAGGCTCGTGCAGCAGCGCCCTGCATTCTCTTCCTAGACGA
GCTCGATGCCATCACCGCCAAGAGGGACGACCCATCTACCCCCGGGAGTG
ATGCAGATGATGGAGGTGTCCATTCCCGCGTCCTGAGTACCCTGCTCAAT
GAGATGGATGGTGTGGCAACCTCCTCTTCCCGACGGGAAGGAAGTAAGGG
TAAGGGGGCGGGTGGGAGGACGAGCAGCGGTGTTGGAGGATGTGGAGTCC
TTGTTCTTGCAGCAACAAATCGCCGGGAAGCACTGGACGCTGCACTTTTG
CGCCCAGGACGCCTCCAGGAGAGTATTTTGCTGGACTTGCCTTCGGGGGA
GGATCGCCTGGGTGTGCTACGGGTGCATGCAGGACGCCTTCCACTTGGGG
TTGGAGTGGACCTGGAGAGACTCAGCCGGGAAGATCTTTCGGGAGGAATG
AGCTGTTCTGATTTAGAGGCCACTTGCCGTGAGGCTGCAATGATGGCACT
GAGGGAAGACCTGGAGGGTGCAACCGAGGTGAAGTCTGAACATCTCATAC
GTGCCCTAGAGGGTCGAAGAGCTGGGAGACTTCGAATGCAGCGATTCACC
TTCTCTGTTGGTAGTGCATAG
back to top