mRNA_C-tenellus_contig6683.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6683.3.1 vs. uniprot
Match: UPI001F0B79BD (class I SAM-dependent methyltransferase n=1 Tax=Streptomyces sp. LAM7114 TaxID=2487275 RepID=UPI001F0B79BD) HSP 1 Score: 144 bits (362), Expect = 3.940e-36 Identity = 82/198 (41.41%), Postives = 109/198 (55.05%), Query Frame = 2 Query: 368 AMPGLKIVGVEPIEAMRREFKQALPEVHIVEGTGEAIPLPHESALAVIAAQSFHWMSTPDVLKEIHRVLLPGGLLALIWNTRDVSVPWVRALDDIIDPFYGPSVPRQQSGRWRDAFVGMEG-GGVGTREKRSSTSSLFGPLTERHFRHSQ---QPESEQLEAIRKAKELVETHEGTQEDVIQGRGIDLPYDTEVYWCR 949 A+ G ++V VEP+ MR + LP V++ GT EA LP SA AV+AAQS+HW D L E+ R+L PGG LAL+WNT D SVPWVR DII F +P G WR AF G +G G + R + S+ + ER S +EQ + ++ +H+ T+ + GR IDLPY T+VYW R Sbjct: 60 ALTGAEVVAVEPVAEMRERLAELLPGVNVTAGTAEATGLPDASADAVVAAQSWHWFQEADALAEVERLLRPGGALALVWNTYDTSVPWVRDFQDIIFRFAPRDLPSPLDGGWRKAFAGRDGWGAISERHWPNPHSTTVTDVVERMMSSSHVAVMSPAEQEGVRAEVLSVLGSHDATRRE---GR-IDLPYTTDVYWVR 253
BLAST of mRNA_C-tenellus_contig6683.3.1 vs. uniprot
Match: UPI0019141BBC (class I SAM-dependent methyltransferase n=1 Tax=Pseudomonas sp. TH03 TaxID=2796369 RepID=UPI0019141BBC) HSP 1 Score: 143 bits (361), Expect = 5.620e-36 Identity = 80/198 (40.40%), Postives = 115/198 (58.08%), Query Frame = 2 Query: 377 GLKIVGVEPIEAMRREFKQALPEVHIVEGTGEAIPLPHESALAVIAAQSFHWMSTPDVLKEIHRVLLPGGLLALIWNTRDVSVPWVRALDDIIDPFYGPSVPRQQSGRWRDAFVGMEGGGVG-TREKRSSTSSLFGPLTERHFRHS---QQPESEQLEAIRKAKELVETHEGTQEDVIQGRG-IDLPYDTEVYWCRKM 955 G+ +V +EP+EAMR EF + LP+V I+EGT E+IPL +A A++ AQ+FHW +T L EIHRVL P G L LIWN RD SV WV A+ DII P+ G + PR +G WR F+G T + T S + +R S P +E+ + + + + L++TH ++GR I+ PY T+ Y C ++ Sbjct: 64 GIDVVAIEPVEAMRTEFAKNLPDVRILEGTAESIPLESGTAQALVCAQAFHWFATEPALAEIHRVLKPNGRLGLIWNVRDESVDWVAAITDIITPYEGDT-PRFHNGNWRRPFIGRYFSDPEVTCFPYTQTGSAQEVIIDRFMSVSFIAALPPAEKAKVVEQLQALIQTHPS-----LRGRETIEFPYQTQAYVCHRL 255
BLAST of mRNA_C-tenellus_contig6683.3.1 vs. uniprot
Match: A0A329I8R9_9PSED (SAM-dependent methyltransferase n=1 Tax=Pseudomonas sp. RIT 412 TaxID=2202161 RepID=A0A329I8R9_9PSED) HSP 1 Score: 137 bits (345), Expect = 1.110e-33 Identity = 76/212 (35.85%), Postives = 114/212 (53.77%), Query Frame = 2 Query: 383 KIVGVEPIEAMRREFKQALPEVHIVEGTGEAIPLPHESALAVIAAQSFHWMSTPDVLKEIHRVLLPGGLLALIWNTRDVSVPWVRALDDIIDPFYGPSVPRQQSGRWRDAFVGMEGGGVGTREKRSSTSSLFGP--LTERHFRHSQQ------------------PESEQLEAIRKAKELVETHEGTQEDVIQGRGI-DLPYDTEVYWCRKM 955 +++ VEP+EAMRREF + LP + +++GT +++PL S A++ AQ+FHW + L EIHRVL+PGG L L+WN RD SV WV + II P+ G + PR +G+WR F S FG LT ++ HS PE+E+ E + +EL++TH ++GR + + PY T+ Y CR++ Sbjct: 66 RLIAVEPVEAMRREFARGLPRIAVIDGTAQSLPLADGSVDALVCAQAFHWFADDTALAEIHRVLVPGGRLGLVWNVRDESVDWVAEITRIITPYEGDT-PRFHTGQWRRPF---------------QDSHCFGQPELTCFNYHHSGSAETVIMNRFLSVSFIAALPEAEKAEVTAQLRELIQTH-----PALRGREVVEFPYQTQAYLCRRL 256
BLAST of mRNA_C-tenellus_contig6683.3.1 vs. uniprot
Match: UPI0018F668A3 (class I SAM-dependent methyltransferase n=1 Tax=Sandaracinobacteroides hominis TaxID=2780086 RepID=UPI0018F668A3) HSP 1 Score: 135 bits (339), Expect = 7.560e-33 Identity = 72/183 (39.34%), Postives = 97/183 (53.01%), Query Frame = 2 Query: 377 GLKIVGVEPIEAMRREFKQALPEVHIVEGTGEAIPLPHESALAVIAAQSFHWMSTPDVLKEIHRVLLPGGLLALIWNTRDVSVPWVRALDDIIDPFYGPSVPRQQSGRWRDAFVGMEGGGVGTREKRSSTSSLFGPLTERHFRHSQQPESEQLEAIRKAKELVETHEGTQEDVIQGRGIDLPY 925 G +++ VEP+ AMR +A P+V +EGT E IPLP +SA A++ AQ+FHW +TP L E+HRVL PGG+L LIWN RD V WV L +IDP +G PR +SG+WR F ++ F + E HFR+ H G EDVI GR + + + Sbjct: 64 GAEVIAVEPVAAMRARLSEAFPQVKALEGTAEQIPLPAQSADAIVCAQAFHWFATPAALAEMHRVLKPGGMLGLIWNVRDERVDWVARLSALIDP-HGGDAPRYRSGKWRQQFP----------------AAGFRHVGEAHFRND--------------------HVGPAEDVIVGRTLSVSF 209
BLAST of mRNA_C-tenellus_contig6683.3.1 vs. uniprot
Match: A0A1V9UP80_9PSED (SAM-dependent methyltransferase n=1 Tax=Pseudomonas sp. Bc-h TaxID=1943632 RepID=A0A1V9UP80_9PSED) HSP 1 Score: 133 bits (334), Expect = 3.970e-32 Identity = 79/195 (40.51%), Postives = 106/195 (54.36%), Query Frame = 2 Query: 386 IVGVEPIEAMRREFKQALPEVHIVEGTGEAIPLPHESALAVIAAQSFHWMSTPDVLKEIHRVLLPGGLLALIWNTRDVSVPWVRALDDIIDPFYGPSVPRQQSGRWRDAFVGMEGGGVG-TREKRSSTSSLFGPLTERHFRHS---QQPESEQLEAIRKAKELVETHEGTQEDVIQGRG-IDLPYDTEVYWCRKM 955 ++GVEP+ AMR EF LP+V IV GT ++IPLP SA AV+ AQ+FHW + L +IHRVL PGG L L+WN RD SV WV + II P+ G + PR +G WR F G T S T + + R S P +E+ + +EL+ TH ++GR I PY T+ Y CR++ Sbjct: 67 LIGVEPVHAMRSEFAAHLPDVRIVPGTAQSIPLPDSSADAVVCAQAFHWFADSAALAQIHRVLKPGGKLGLVWNVRDESVDWVAEITRIITPYEGDT-PRFHTGNWRLPFDGRYFSAPEMTCFNYSHTGNAETVIMNRFLSVSFIAALPAAEKATVTEQLRELINTH-----PALRGRETIAFPYQTQAYLCRRL 255
BLAST of mRNA_C-tenellus_contig6683.3.1 vs. uniprot
Match: T1ATE4_9ZZZZ (Methyltransferase type 11 n=1 Tax=mine drainage metagenome TaxID=410659 RepID=T1ATE4_9ZZZZ) HSP 1 Score: 134 bits (336), Expect = 4.210e-32 Identity = 80/209 (38.28%), Postives = 107/209 (51.20%), Query Frame = 2 Query: 386 IVGVEPIEAMRREFKQALPEVHIVEGTGEAIPLPHESALAVIAAQSFHWMSTPDVLKEIHRVLLPGGLLALIWNTRDVSVPWVRALDDIIDPFYGPSVPRQQSGRWRDAFVGMEGGGVGTREKRSSTSSLFGPLTERHFRHSQ-------------------QPESEQLEAIRKAKELVETHEGTQEDVIQGRG-IDLPYDTEVYWCRK 952 +V VEP MR EF + +P++ +++GT EAIP V+ AQ+FHW L+EI RVL PGG L L+WN RD VPW+R I++ Y VPR + RWR AF E GG+ FGPL R F H Q QP +EQ + R+ +EL+ + + +GR ID+PY TEVYWC + Sbjct: 80 LVPVEPTRGMREEFARRIPDLPVLDGTAEAIPXXXXXXXXVLVAQAFHWFRARVALREIARVLRPGGGLGLVWNMRDERVPWMREFTQILED-YNWGVPRTRQRRWRPAF---ERGGI-----------PFGPLHHRTFHHIQWVHIPGVVARALSVSMIAVQPVAEQRKVARRIRELL-----ASDPMTRGRRLIDIPYRTEVYWCHR 268
BLAST of mRNA_C-tenellus_contig6683.3.1 vs. uniprot
Match: A0A8J6VPN7_9CYAN (Methyltransferase domain-containing protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6VPN7_9CYAN) HSP 1 Score: 133 bits (334), Expect = 4.280e-32 Identity = 76/211 (36.02%), Postives = 108/211 (51.18%), Query Frame = 2 Query: 377 GLKIVGVEPIEAMRREFKQALPEVHIVEGTGEAIPLPHESALAVIAAQSFHWMSTPDVLKEIHRVLLPGGLLALIWNTRDVSVPWVRALDDIIDPFYGPSVPRQQSGRWRDAFVGMEGGGVGTREKRSSTSSLFGPLTERHFRHSQQPESE-------------------QLEAIRKAKELVETHEGTQEDVIQGRGIDLPYDTEVYWCRK 952 G ++V +EP+E MR++F+ LP + ++ GT E+IPL S V AQ+FHW L EIHRVL PGG L LIWN RD S WV + II P G + PR ++G+WR AF + LF PL + F ++ Q + + Q +R+ +EL+E H T++ I I+ PY TEV+WC + Sbjct: 67 GCQVVAIEPVEGMRQKFEALLPNIPVLNGTAESIPLAAASTDVVTVAQAFHWFQGEAALAEIHRVLKPGGYLGLIWNVRDESFDWVAQISAIITPHEGDA-PRYRTGQWRTAF---------------EQTDLFTPLETQIFSYAHQYDLDAAIDRVASISFIAALNAQTQQTVLRQVRELLEHHPQTRDRPI----IEHPYRTEVFWCTR 257
BLAST of mRNA_C-tenellus_contig6683.3.1 vs. uniprot
Match: A0A2T4FP75_9PSED (Class I SAM-dependent methyltransferase n=6 Tax=Pseudomonas TaxID=286 RepID=A0A2T4FP75_9PSED) HSP 1 Score: 132 bits (333), Expect = 5.510e-32 Identity = 75/205 (36.59%), Postives = 115/205 (56.10%), Query Frame = 2 Query: 386 IVGVEPIEAMRREFKQALPEVHIVEGTGEAIPLPHESALAVIAAQSFHWMSTPDVLKEIHRVLLPGGLLALIWNTRDVSVPWVRALDDIIDPFYGPSVPRQQSGRWRDAFVG----------MEGGGVGTREK----RSSTSSLFGPLTERHFRHSQQPESEQLEAIRKAKELVETHEGTQEDVIQGRG-IDLPYDTEVYWCRKM 955 ++ VEP++AM + + LP+V +V+GT +++PL SA AV+ AQ+FHW ST L+EIHRVL P G L L+WN RD SV WV A+ II P+ G + PR +GRWR+AF G VG+ ++ R + S L P++E+ + + ++L++TH ++GR + PY T+ Y CR++ Sbjct: 67 LIAVEPVQAMGAQLSKLLPDVRLVDGTADSMPLAAASADAVVCAQAFHWFSTQAALQEIHRVLKPAGRLGLVWNVRDESVAWVAAITAIITPYEGDT-PRFHTGRWREAFTGELFSAPELSCFPYSHVGSPQEVIMDRFLSVSFIAAL----------PDAEKAKVTAQLQDLIDTHPD-----LRGRDTVAFPYQTQAYVCRRL 255
BLAST of mRNA_C-tenellus_contig6683.3.1 vs. uniprot
Match: A0A126S4J6_PSEPU (Methyltransferase n=17 Tax=Pseudomonas TaxID=286 RepID=A0A126S4J6_PSEPU) HSP 1 Score: 132 bits (332), Expect = 7.630e-32 Identity = 74/206 (35.92%), Postives = 109/206 (52.91%), Query Frame = 2 Query: 383 KIVGVEPIEAMRREFKQALPEVHIVEGTGEAIPLPHESALAVIAAQSFHWMSTPDVLKEIHRVLLPGGLLALIWNTRDVSVPWVRALDDIIDPFYGPSVPRQQSGRWRDAFVGM--------------EGGGVGTREKRSSTSSLFGPLTERHFRHSQQPESEQLEAIRKAKELVETHEGTQEDVIQGRG-IDLPYDTEVYWCRKM 955 ++ VEP+ AMR F + LPEV ++EGT + IPL S ++ AQ+FHW + L+E+HRVL PGG L LIWN RD +V WV + +II P+ G + PR +GRWRDAF G EG +R + S L P++EQ + + ++LV+ H ++GR + PY T+ Y C+++ Sbjct: 66 RLTAVEPVAAMRERFHERLPEVPVLEGTAQHIPLADASQQVLVCAQAFHWFADAAALREMHRVLAPGGRLGLIWNVRDETVDWVARITEIITPYEGDT-PRFHTGRWRDAFAGSRFSAPQLTTLPHVHEGNPQTVILERLRSVSFIAAL----------PQAEQDRVMARLQDLVDNH-----PALKGRERVAFPYQTQAYVCQRL 255
BLAST of mRNA_C-tenellus_contig6683.3.1 vs. uniprot
Match: A0A538LKY4_9ACTN (Class I SAM-dependent methyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538LKY4_9ACTN) HSP 1 Score: 132 bits (331), Expect = 8.870e-32 Identity = 80/211 (37.91%), Postives = 102/211 (48.34%), Query Frame = 2 Query: 377 GLKIVGVEPIEAMRREFKQALPEVHIVEGTGEAIPLPHESALAVIAAQSFHWMSTPDVLKEIHRVLLPGGLLALIWNTRDVSVPWVRALDDIIDPFYGPSVPRQQSGRWRDAFVGMEGGGVGTREKRSSTSSLFGPLTERHFRHSQQ-------------------PESEQLEAIRKAKELVETHEGTQEDVIQGRGIDLPYDTEVYWCRK 952 G ++V VEP+ MR + +P +V+G EA+PLP SA AV AQ+FHW ST + L EIHRVL PGG LAL+WN RD+ P A D ++ G VP +SGRWR AF E LFGPL E F H Q+ P+ EQ A+ + KEL Q I L Y T++Y C + Sbjct: 63 GARVVAVEPVAGMRSTLARVVPLAEVVDGAAEAMPLPDGSADAVTVAQAFHWFSTGEALAEIHRVLRPGGGLALVWNRRDLDEPLQAATDRLVARHRG-DVPTHRSGRWRSAFEATE---------------LFGPLEEHLFSHGQELDRAGLVERVMSTSVMAALPDDEQRAAVAEIKELA---------ARQPEPIRLSYTTQIYLCWR 248 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6683.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6683.3.1 >prot_C-tenellus_contig6683.3.1 ID=prot_C-tenellus_contig6683.3.1|Name=mRNA_C-tenellus_contig6683.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=210bp MLQLYLALITCWDAMPGLKIVGVEPIEAMRREFKQALPEVHIVEGTGEAIback to top mRNA from alignment at C-tenellus_contig6683:2286..6824+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6683.3.1 ID=mRNA_C-tenellus_contig6683.3.1|Name=mRNA_C-tenellus_contig6683.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4539bp|location=Sequence derived from alignment at C-tenellus_contig6683:2286..6824+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6683:2286..6824+ >mRNA_C-tenellus_contig6683.3.1 ID=mRNA_C-tenellus_contig6683.3.1|Name=mRNA_C-tenellus_contig6683.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=630bp|location=Sequence derived from alignment at C-tenellus_contig6683:2286..6824+ (Choristocarpus tenellus KU2346)back to top |