mRNA_C-tenellus_contig6683.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig6683.1.1
Unique NamemRNA_C-tenellus_contig6683.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig6683.1.1 vs. uniprot
Match: A0A6H5KQ50_9PHAE (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ50_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 9.190e-27
Identity = 59/120 (49.17%), Postives = 77/120 (64.17%), Query Frame = 2
Query:  215 TSQHRKAHAHFEEKAAGWDDNPFRHYITKLLVDWIKAQSWWSPPIEGSVMDFGCGTGCLTMLLKNDIDGIVIGVDTSQAMLEQFEKKVAGVGGSNGGTKVITRAVEV-GKWKTDRGAFDA 571
            +S   ++HA FE KAAGWDD P     T+ +  WI  Q WW+PP++G  +DFGCGTGCLTM L++D+   V GVDTS+AMLEQF++K  G G       V T AVE+ G  +   GA D+
Sbjct:    8 SSPTSRSHARFEVKAAGWDDKPIVKGTTETIRAWIVNQPWWTPPLDGPTLDFGCGTGCLTMALRDDLGESVTGVDTSRAMLEQFDRKAEGRG-------VTTVAVELTGPGQLGEGADDS 120          
BLAST of mRNA_C-tenellus_contig6683.1.1 vs. uniprot
Match: I2PXY1_9DELT (Methyltransferase family protein n=2 Tax=Desulfovibrionaceae TaxID=194924 RepID=I2PXY1_9DELT)

HSP 1 Score: 65.1 bits (157), Expect = 6.160e-9
Identity = 34/93 (36.56%), Postives = 52/93 (55.91%), Query Frame = 2
Query:  239 AHFEEKAAGWDDNPFRHYITKLLVDWIKAQSWWSPPIEGSVMDFGCGTGCLTMLLKNDIDGIVIGVDTSQAMLEQFEKKVAGVGGSNGGTKVI 517
            A F+ +AA WD NPFR  +T+ +   + A   +  P+    +DFGCGTG LT+ L +  D +  G+DTS  ML + + K+   G  N  T ++
Sbjct:    6 ARFDARAAAWDANPFRRKLTRDIATAMDAAGLFREPVA-EALDFGCGTGLLTLELAHRCDRVT-GLDTSPGMLAELDAKIEAAGLENVTTLLV 96          
BLAST of mRNA_C-tenellus_contig6683.1.1 vs. uniprot
Match: A0A1V5QRK6_9BACT (Trans-aconitate 2-methyltransferase n=1 Tax=Acidobacteria bacterium ADurb.Bin340 TaxID=1852787 RepID=A0A1V5QRK6_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 1.840e-8
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 2
Query:  245 FEEKAAGWDDNPFRHYITKLLVDWIKAQSWWSPPIEGS--VMDFGCGTGCLTMLLKNDIDGIVIGVDTSQAMLEQFEKKVAGV 487
            FE +AA WD  P+R  + + + + I+AQ     P+ G+   +D+GCGTG LT+ L+  + G + GVDTS AML + E K+A V
Sbjct:    4 FEREAARWDGAPWRMALARSVAEAIQAQV----PLSGTDAALDYGCGTGLLTLALRPAV-GRITGVDTSPAMLSRLEAKLAEV 81          
BLAST of mRNA_C-tenellus_contig6683.1.1 vs. uniprot
Match: A0A451BPB7_9GAMM (Methyltransferase domain-containing protein n=1 Tax=Candidatus Kentron sp. SD TaxID=2126332 RepID=A0A451BPB7_9GAMM)

HSP 1 Score: 61.6 bits (148), Expect = 1.050e-7
Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 2
Query:  245 FEEKAAGWDDNPFRHYITKLLVDWIKAQSWWSPPIEGSVMDFGCGTGCLTMLLKNDIDGIVIGVDTSQAMLEQFEKKVAGVG 490
            F+ KAA WD++P +  +T  +   +  +   +P ++  VMDFGCGTG LT+ L+  +  I  G+D S+ MLE F  K+A +G
Sbjct:    9 FDRKAASWDEDPTKIKLTNDVFHALSREGILTPEMD--VMDFGCGTGLLTIRLRPLVRSIT-GLDNSRGMLEVFNAKIASLG 87          
BLAST of mRNA_C-tenellus_contig6683.1.1 vs. uniprot
Match: S7TKX0_9DELT (Pedicted SAM-dependent methyltransferase n=1 Tax=Desulfovibrio sp. X2 TaxID=941449 RepID=S7TKX0_9DELT)

HSP 1 Score: 60.8 bits (146), Expect = 1.900e-7
Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 2
Query:  245 FEEKAAGWDDNPFRHYITKLLVDWIKAQSWWSPPIEGSVMDFGCGTGCLTMLLKNDIDGIVIGVDTSQAMLEQFEKKVAGVGGSNGGTKVITRAVEVGKWKTDRGAFD 568
            F+++AA WD+ P R  +   +   ++     +P ++  V+DFGCGTG LT+ L+  + G V G+D+S  ML + E+KVA +G  N    V T  V+V + +   G +D
Sbjct:    8 FDKEAAAWDEVPARVKLADDVARAVREAVALAPSMD--VLDFGCGTGLLTLRLQPHV-GSVTGLDSSPGMLARLEEKVAELGIGN----VRTALVDVSRGEAVPGRYD 108          
BLAST of mRNA_C-tenellus_contig6683.1.1 vs. uniprot
Match: A0A1G0ZUQ1_9BACT (Methyltransf_11 domain-containing protein n=1 Tax=Lentisphaerae bacterium RIFOXYA12_FULL_48_11 TaxID=1798578 RepID=A0A1G0ZUQ1_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 5.160e-7
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 2
Query:  245 FEEKAAGWDDNPFRHYITKLLVDWIKAQSWWSPPIEGSVMDFGCGTGCLTMLLKNDIDGIVIGVDTSQAMLEQFEKKV 478
            F++ AA WD NP R  + K + + I+      P ++  VMDFG GTG LT+ L  D+ G ++ VDTS+ ML   EKK+
Sbjct:   13 FDKVAAEWDSNPRRIEMAKAVGETIRKAVKLCPDMK--VMDFGAGTGLLTLALLPDV-GSIVAVDTSEEMLRVLEKKL 87          
BLAST of mRNA_C-tenellus_contig6683.1.1 vs. uniprot
Match: A0A7X7U1E4_9BACT (Methyltransferase domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X7U1E4_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 5.290e-7
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 2
Query:  245 FEEKAAGWDDNPFRHYITKLLVDWIKAQSWWSPPIEGSVMDFGCGTGCLTMLLKNDIDGIVIGVDTSQAMLEQFEKKVA 481
            F+ +AA WD+NP R  + + +   I  Q+  SP    + +DFGCGTG LT+ L   +  IV GVD+SQ ML+    KVA
Sbjct:    8 FDTEAAAWDENPARVKLAEDVAAAIVRQA--SPDAGMTALDFGCGTGLLTLRLAPRVRSIV-GVDSSQGMLDVLAAKVA 83          
BLAST of mRNA_C-tenellus_contig6683.1.1 vs. uniprot
Match: A0A261XYZ4_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XYZ4_9FUNG)

HSP 1 Score: 59.7 bits (143), Expect = 6.650e-7
Identity = 33/89 (37.08%), Postives = 47/89 (52.81%), Query Frame = 2
Query:  215 TSQHRKAHAHFEEKAAGWDDNPFRHYITKLLVDWIKAQSWWSPPIEGSVMDFGCGTGCLTMLLKNDIDGIVIGVDTSQAMLEQFEKKVA 481
            T+Q   +   F++ A  WDD P     T    + I    +   P   SVM+FGCGTG L+M L   I   V+GVD S+ M++ F +K+A
Sbjct:    4 TTQDASSGNRFDDMAESWDDRPDVRETTHHAYEAILKSGYPFDPNATSVMEFGCGTGMLSMKLAPHIKS-VLGVDASEGMIKVFSRKIA 91          
BLAST of mRNA_C-tenellus_contig6683.1.1 vs. uniprot
Match: A0A3N5R3N2_9DELT (Class I SAM-dependent methyltransferase (Fragment) n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3N5R3N2_9DELT)

HSP 1 Score: 57.0 bits (136), Expect = 9.550e-7
Identity = 28/78 (35.90%), Postives = 49/78 (62.82%), Query Frame = 2
Query:  245 FEEKAAGWDDNPFRHYITKLLVDWIKAQSWWSPPIEGSVMDFGCGTGCLTMLLKNDIDGIVIGVDTSQAMLEQFEKKV 478
            F+++AA WD+NP R  + + + + +K     SP ++   MDFGCGTG +T+ L+  +  I  G+D+++ MLE   +K+
Sbjct:    8 FDKEAASWDENPARTRLAEDVAEALKKALPLSPAMDA--MDFGCGTGLVTLRLQPLVRAIT-GIDSARGMLEILNRKI 82          
BLAST of mRNA_C-tenellus_contig6683.1.1 vs. uniprot
Match: A0A7X8CBY9_9DELT (Class I SAM-dependent methyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7X8CBY9_9DELT)

HSP 1 Score: 58.2 bits (139), Expect = 1.690e-6
Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 2
Query:  245 FEEKAAGWDDNPFRHYITKLLVDWIKAQSWWSPPIEGSVMDFGCGTGCLTMLLKNDIDGIVIGVDTSQAMLEQFEKKV 478
            F ++AA WD NP R  +   +   I  +   +P ++  V+DFGCGTG L + L+  +  I  GVD+SQ ML+ F KK+
Sbjct:    8 FGKEAASWDKNPGRVKLADDVARAISDEKILTPDMD--VLDFGCGTGLLALRLRPQVRSIT-GVDSSQGMLDVFNKKI 82          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6683.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQ50_9PHAE9.190e-2749.17Methyltransf_25 domain-containing protein n=1 Tax=... [more]
I2PXY1_9DELT6.160e-936.56Methyltransferase family protein n=2 Tax=Desulfovi... [more]
A0A1V5QRK6_9BACT1.840e-842.17Trans-aconitate 2-methyltransferase n=1 Tax=Acidob... [more]
A0A451BPB7_9GAMM1.050e-739.02Methyltransferase domain-containing protein n=1 Ta... [more]
S7TKX0_9DELT1.900e-735.19Pedicted SAM-dependent methyltransferase n=1 Tax=D... [more]
A0A1G0ZUQ1_9BACT5.160e-742.31Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A7X7U1E4_9BACT5.290e-743.04Methyltransferase domain-containing protein n=1 Ta... [more]
A0A261XYZ4_9FUNG6.650e-737.08Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
A0A3N5R3N2_9DELT9.550e-735.90Class I SAM-dependent methyltransferase (Fragment)... [more]
A0A7X8CBY9_9DELT1.690e-639.74Class I SAM-dependent methyltransferase n=1 Tax=De... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6683contigC-tenellus_contig6683:228..1507 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog941449.dsx2_0882
PFAMsMethyltransf_23,Methyltransf_25
Model size839
Max annot lvl28221|Deltaproteobacteria
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.63e-05
EggNOG OGsCOG0500@1|root,COG2226@2|Bacteria,1N0SX@1224|Proteobacteria,42TNP@68525|delta/epsilon subdivisions,2WR5X@28221|Deltaproteobacteria,2MHIB@213115|Desulfovibrionales
DescriptionTellurite resistance protein TehB
Cds size240
COG categoryQ
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789984.7127142-UTR-C-tenellus_contig6683:227..4651680789984.7127142-UTR-C-tenellus_contig6683:227..465Choristocarpus tenellus KU2346UTRC-tenellus_contig6683 228..465 -
1680789984.735668-UTR-C-tenellus_contig6683:705..7381680789984.735668-UTR-C-tenellus_contig6683:705..738Choristocarpus tenellus KU2346UTRC-tenellus_contig6683 706..738 -
1680789984.7490525-UTR-C-tenellus_contig6683:1179..15071680789984.7490525-UTR-C-tenellus_contig6683:1179..1507Choristocarpus tenellus KU2346UTRC-tenellus_contig6683 1180..1507 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789984.7261817-CDS-C-tenellus_contig6683:465..7051680789984.7261817-CDS-C-tenellus_contig6683:465..705Choristocarpus tenellus KU2346CDSC-tenellus_contig6683 466..705 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6683.1.1prot_C-tenellus_contig6683.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig6683 466..705 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig6683.1.1

>prot_C-tenellus_contig6683.1.1 ID=prot_C-tenellus_contig6683.1.1|Name=mRNA_C-tenellus_contig6683.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=80bp
MDFGCGTGCLTMLLKNDIDGIVIGVDTSQAMLEQFEKKVAGVGGSNGGTK
VITRAVEVGKWKTDRGAFDAEMERRGGSG*
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mRNA from alignment at C-tenellus_contig6683:228..1507-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig6683.1.1 ID=mRNA_C-tenellus_contig6683.1.1|Name=mRNA_C-tenellus_contig6683.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1280bp|location=Sequence derived from alignment at C-tenellus_contig6683:228..1507- (Choristocarpus tenellus KU2346)
TGCCCTTGATTTTGAATGCCTAGCATTCTTGAACTCCCCTCTTTTCAATA TCTTCGGATCACCTGCTGTGACCCTCTCGACAGGCTTTAACTTTCACATC TCTGTAACCCTATGCCTTATCAACACTTTCCTAGATGAACGTTCGTTTGA ATATCCAAAGTAGTCCAGATTCCTAATTCAACTGGTATATTCCCTGTTTT CGTAGACCGATGGAACTTCTCAGCATAGGAAAGCACATGCTCACTTCGAG GAGAAAGCAGCTGGGTGGGATGACAACCCCTTCAGGCACTACATCACCAA GCTTCTCGTCGACTGGATCAAAGCTCAGGTGTGAGTGACTCTGATTGCTA ACCCGGTGTGCGCAAGAGCGGTATACTGGTAAACTGTTTGATGAACATCG TATGTAATATTTGTGATATGTAATGGTCAACAATCGCTCATGAAGTCGAA GAAGGCGATTGCTATCGTGTTCTGTAACACCGTATCTATCTGCTGGTACA ATAACAGAACTCTTGTGTGTATTACTAGGGGCACTATTTTTCTTGTAGGT GACCTAGGGCGTGTCATTTTCTCATGATTTTGTCCAGTGATAGAATTGTT GTCTCTTCGTTCGCTAGAATTGGAGGTAATTCACTCATTCCGCTTCCAAG ATTGGAATAGACATATTTCCAAAGGCCGATCTCATACCAGACTAACAAAA ATGCCACGCCCTGGCGTCATTGGCGTCTTCTCCTTCTCTCATCCCCGTGA AAAACTTCCCGTCCAACAGTCATGGTGGTCCCCTCCCATAGAAGGTTCAG TAATGGACTTCGGTTGCGGCACTGGGTGTCTCACCATGCTGCTGAAGAAT GACATCGACGGGATCGTCATAGGAGTGGACACTAGCCAGGCCATGCTGGA GCAGTTTGAGAAGAAGGTTGCTGGGGTTGGGGGGTCGAACGGGGGCACCA AAGTTATTACCAGGGCAGTGGAGGTAGGTAAATGGAAAACGGATCGAGGT GCATTTGATGCAGAGATGGAGAGAAGAGGAGGAAGTGGATGAGAAATGAC CCCTGCTATGAAGCCAGGCTCTGTAACCTACTGTTTTGGGATCAGGGTTT GAGGTGGTGAAAAGGAATTGCATAGGTGATTCTTGGGTATGTATGTATGA TATTTTTGGGATACCAACAGTACATGTGAATGCTCCCAAGATATCTTCTT CTGGCAGTAAGCCCACTGATCTAGCTCCAAACCCTAGGGTTTGTCCGAAT CCCCTCATGGTTGGTTTTGTACTAGTGCTG
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Coding sequence (CDS) from alignment at C-tenellus_contig6683:228..1507-

>mRNA_C-tenellus_contig6683.1.1 ID=mRNA_C-tenellus_contig6683.1.1|Name=mRNA_C-tenellus_contig6683.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=240bp|location=Sequence derived from alignment at C-tenellus_contig6683:228..1507- (Choristocarpus tenellus KU2346)
ATGGACTTCGGTTGCGGCACTGGGTGTCTCACCATGCTGCTGAAGAATGA
CATCGACGGGATCGTCATAGGAGTGGACACTAGCCAGGCCATGCTGGAGC
AGTTTGAGAAGAAGGTTGCTGGGGTTGGGGGGTCGAACGGGGGCACCAAA
GTTATTACCAGGGCAGTGGAGGTAGGTAAATGGAAAACGGATCGAGGTGC
ATTTGATGCAGAGATGGAGAGAAGAGGAGGAAGTGGATGA
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