mRNA_C-tenellus_contig1197.1.6 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1197.1.6
Unique NamemRNA_C-tenellus_contig1197.1.6
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
[Close]
BLAST of mRNA_C-tenellus_contig1197.1.6 vs. uniprot
Match: D7FYL5_ECTSI (MFAP1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL5_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 1.760e-83
Identity = 148/196 (75.51%), Postives = 165/196 (84.18%), Query Frame = 3 
Query: 1206 MTENHLEDNESEGGAPDXXXDMDEELAYEEWKVRELGRVRKEKEEKERLVXXXXXXXXRRAMTDDQRRLEDAMMGKNQEKDKGKIKFMQKYYHKGAFYMDEESVKMKDDVRRRSYHEPTLEDKFDKTQMPRVMQASSKTQVKKFGRSGQTKWTHLANEDTTQRDSAWAQETHMATKMQHKMSGVGDIDNAFKRRKK 1793
            MTENHL DNESEG APD   D+DEELA+EEWKVREL RVRKEKEE+E  +        RR MTDD+RR+ED M+GK+  KDKG IKFMQKYYHKGAFYMD++S+K++DDVRRRSY+EPTLEDKFDKTQMP+ MQ      VK FGRSGQTKWTHLANEDTTQ DSAWAQETH+ATKMQHKMSGVG+ID AFKRRKK
Sbjct:    1 MTENHLGDNESEGDAPDDDDDLDEELAFEEWKVRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHKGAFYMDDDSLKVEDDVRRRSYNEPTLEDKFDKTQMPKPMQ------VKNFGRSGQTKWTHLANEDTTQWDSAWAQETHVATKMQHKMSGVGNIDAAFKRRKK 190
[Close]
BLAST of mRNA_C-tenellus_contig1197.1.6 vs. uniprot
Match: A0A7S2CMS0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMS0_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.120e-53
Identity = 120/253 (47.43%), Postives = 162/253 (64.03%), Query Frame = 3 
Query: 1035 QVLKPVFVPKAKRETAIEREXXXXXXXXXXXXXXXQNXXRKRETRQLAAEVVQREEEMTENHLEDNESEGGAPDXXXDMDEELAYEEWKVRELGRVRKEKEEKERLVXXXXXXXXRRAMTDDQRRLEDAMMGKNQEKDKGKIKFMQKYYHKGAFYMDEESVKMKDDVRRRSYHEPTLEDKFDKTQMPRVMQASSKTQVKKFGRSGQTKWTHLANEDTTQRDSAWAQETHMATKMQHKMSGVGDIDNAFKRRKK 1793
            Q++KPVFV + KR T +E E               +   RK ETR + AE ++REE+M EN + DN+S+   P    D+D+ +AYE WKVREL R+ ++   KE++         RRA+TD+QR  ED  +GK + +DK K KF+QKYYHKGAFYMD+E  + KD VR+R Y +PTLEDKFDK  +PRVMQ      VKKFG +GQTK+THL ++DTT+ DS W Q + +      KMSG+GDID+  ++R K
Sbjct:  193 QLMKPVFVSRNKRATILEAERKVKVEETKRKAAAVKLEQRKIETRNMVAEKIRREEQMVENQVGDNDSDDNMPSDTDDLDDPVAYEAWKVRELQRLTRDNAIKEKMKKEKEETERRRALTDEQRGAEDLALGKVKTEDKAKWKFLQKYYHKGAFYMDDEEHEKKD-VRQRKYDQPTLEDKFDKAALPRVMQ------VKKFGFAGQTKYTHLLDQDTTEWDSPWMQNSALRQTTDSKMSGLGDIDSGGRKRIK 438
[Close]
BLAST of mRNA_C-tenellus_contig1197.1.6 vs. uniprot
Match: A0A7S2CP46_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP46_9STRA)

HSP 1 Score: 191 bits (484), Expect = 2.320e-51
Identity = 107/214 (50.00%), Postives = 146/214 (68.22%), Query Frame = 3 
Query: 1152 RKRETRQLAAEVVQREEEMTENHLEDNESEGGAPDXXXDMDEELAYEEWKVRELGRVRKEKEEKERLVXXXXXXXXRRAMTDDQRRLEDAMMGKNQEKDKGKIKFMQKYYHKGAFYMDEESVKMKDDVRRRSYHEPTLEDKFDKTQMPRVMQASSKTQVKKFGRSGQTKWTHLANEDTTQRDSAWAQETHMATKMQHKMSGVGDIDNAFKRRKK 1793
            RK ETR + AE ++R+EE  ENH++ N+S+   P    D+D+ +AYE WKVREL RV+++++ +            RR +TD+QR  EDA +GKN+ +DKGK KFMQKYYHKGAFYMDE  +   +DVR+R +   TL+DKFDK  +P+VMQ      VKKFG SGQTK+THL ++DTT  D+ W Q+  +      KM+GVGDID+A ++RKK
Sbjct:   26 RKAETRNMVAEQIRRDEEQVENHVDGNDSDANMPSDTDDLDDPMAYEAWKVRELQRVKRDRDLRLVHEQEKAETERRRGLTDEQRAAEDAALGKNKVEDKGKWKFMQKYYHKGAFYMDETEMDA-EDVRKREFDGATLDDKFDKQALPKVMQ------VKKFGFSGQTKYTHLKDQDTTDFDNPWNQKNQLRANYDSKMAGVGDIDSAGRKRKK 232
[Close]
BLAST of mRNA_C-tenellus_contig1197.1.6 vs. uniprot
Match: A0A7S2SCR4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCR4_9STRA)

HSP 1 Score: 187 bits (474), Expect = 4.570e-49
Identity = 116/257 (45.14%), Postives = 161/257 (62.65%), Query Frame = 3 
Query: 1035 QVLKPVFVPKAKRETAIEREXXXXXXXXXXXXXXXQNXXRKRETRQLAAEVVQREEEMTENHLED------NESEGGAPDXXXDMDEELAYEEWKVRELGRVRKEKEEKERLVXXXXXXXXRRAMTDDQRRLEDAMMGKNQEKDKGKIKFMQKYYHKGAFYMDEESVKMKDDVRRRSYHEPTLEDKFDKTQMPRVMQASSKTQVKKFGRSGQTKWTHLANEDTTQRDSAWAQETHMATKMQHKMSGVGDIDNAFKRR 1787
            Q+LKPVFVP+ KR T  ERE                   RK ETR + AE V+RE++  E  LE       N+S+ G P    D D+ + +  W++RE+ RV+++ + +            RR +TD +R  EDA +GKN EKDK K +FMQKYYHKGAFYMD+E++  K+DVR+RSY E TLEDKFDK  +P+V+Q      VKKFG +G+TK+THLA++DTT  ++ W Q++++  K   K+SGVGDID A ++R
Sbjct:   53 QLLKPVFVPRTKRGTVAEREMQEKREASRQLIHEAALEQRKIETRNMVAEQVRREDD--EGMLEPGSIGGGNDSDAGMPSDTDDADDPVVFASWRLREIQRVKRDVDARRAFDLDKAETERRRNLTDAERAAEDAALGKNAEKDKEKWRFMQKYYHKGAFYMDDETMD-KNDVRKRSYGEATLEDKFDKQALPKVLQ------VKKFGFAGRTKYTHLADQDTTDWNNPWMQKSNLREKYDSKLSGVGDIDRAGRKR 300
[Close]
BLAST of mRNA_C-tenellus_contig1197.1.6 vs. uniprot
Match: A0A5D6XW28_9STRA (MFAP1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW28_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.610e-43
Identity = 121/260 (46.54%), Postives = 165/260 (63.46%), Query Frame = 3 
Query: 1029 GEQVLKPVFVPKAKRETAIEREXXXXXXXXXXXXXXXQNXXRKRETRQLAAEVVQREEEMTENHLEDNESEGGA-----PDXXXDMDEELAYEEWKVRELGRVRKEKEEKERLVXXXXXXXXRRAMTDDQRRLEDAMMGKNQEKDKGKIKFMQKYYHKGAFYMDEESVKMKDDVRRRSYHEPTLEDKFDKTQMPRVMQASSKTQVKKFGRSGQTKWTHLANEDTTQRDSAWAQETHMATKMQHKMSGVGDIDNAFKRRKK 1793
            GE +LKPVFVPK  RET   +EXXXXXXXXXX     +   R      L AE ++RE+E       + ++ GGA     PD    +D    Y +W++RE+ R++++++ KE+          RR MT+++R+ ED  + K+   +K K KFMQKY+HKG FY+DE SVK KDDVRRR     TLEDKF+K  +P+VMQ      VK FGRSGQTK+THLA++DT+ RDS WA+   +  K ++K+SGV DI+ + KRRKK
Sbjct:  234 GEALLKPVFVPKKARETLKRQEXXXXXXXXXXQLEAARLESRXXXXXXLVAEEIRREQE-------EGDAGGGATDVEMPDDTDGVDPAQEYRDWELREMRRIKRDRDRKEQKRQEAEEILRRRNMTEEERQAEDRKLKKDVRTEKAKWKFMQKYHHKGVFYVDETSVKDKDDVRRRDVSGATLEDKFNKEMLPKVMQ------VKNFGRSGQTKYTHLADQDTSHRDSLWARNDSIREKFKNKLSGVRDIEGSLKRRKK 480
[Close]
BLAST of mRNA_C-tenellus_contig1197.1.6 vs. uniprot
Match: W4GXR7_9STRA (MFAP1 domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXR7_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.070e-40
Identity = 103/257 (40.08%), Postives = 157/257 (61.09%), Query Frame = 3 
Query: 1026 DGEQVLKPVFVPKAKRETAIEREXXXXXXXXXXXXXXXQNXXRKRETRQLAAEVVQREEEMTENHLEDNESEGGAPDXXXDMDEELAYEEWKVRELGRVRKEKEEKERLVXXXXXXXXRRAMTDDQRRLEDAMMGKNQEKDKGKIKFMQKYYHKGAFYMDEESVKMKDDVRRRSYHEPTLEDKFDKTQMPRVMQASSKTQVKKFGRSGQTKWTHLANEDTTQRDSAWAQETHMATKMQHKMSGVGDIDNA-FKRRKK 1793
            DGEQ+LKP+FVPK  R+T  E+E               +   +K E+R+L AEV+ REE      L+D+ ++   PD    +  E   ++W++RE+ R++++++ ++           RR MTD++R  EDA +GK  EK+K K KF+QKYYHKGAFY+D++S+K   DVRRR   EPTLEDK ++  +P VMQ      VK FG+SG+TK+THL ++DTT   +A   +  +  +   K+SG+  I+ A FKR+++
Sbjct:  199 DGEQMLKPIFVPKRARDTIREQEEKLRAMEERDQALAERALEKKAESRKLVAEVLLREEGDAAQRLQDDATDSEMPDDTDGLHPEKEQQDWELREMRRLKRDRDARDEREREAAETLRRRHMTDEEREKEDAALGKQTEKEKKKWKFLQKYYHKGAFYVDDKSIKTDTDVRRRDADEPTLEDKTNRENLPTVMQ------VKNFGKSGRTKYTHLTDQDTTDHFTALKND-ELRAQYASKLSGLKPINPAPFKRQRR 448
[Close]
BLAST of mRNA_C-tenellus_contig1197.1.6 vs. uniprot
Match: A0A485L535_9STRA (Aste57867_15717 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L535_9STRA)

HSP 1 Score: 164 bits (416), Expect = 5.870e-40
Identity = 105/262 (40.08%), Postives = 160/262 (61.07%), Query Frame = 3 
Query: 1011 DEKDPDGEQVLKPVFVPKAKRETAIEREXXXXXXXXXXXXXXXQNXXRKRETRQLAAEVVQREEEMTENHLEDNESEGGAPDXXXDMDEELAYEEWKVRELGRVRKEKEEKERLVXXXXXXXXRRAMTDDQRRLEDAMMGKNQEKDKGKIKFMQKYYHKGAFYMDEESVKMKDDVRRRSYHEPTLEDKFDKTQMPRVMQASSKTQVKKFGRSGQTKWTHLANEDTTQRDSAWAQETHMATKMQHKMSGVGDID-NAFKRRKK 1793
            D  + +GEQ+LKP+FVPK  R+T  E+E               +   +K E+R++ AEV+QREE   + HL +  ++   PD    +  E   +EW++RE+ R++++++ +E           RR MTD++R  ED  +GK QEK+K K KF+QKYYHKGAFY+D++SVK   DVRRR   EPTLEDK ++  +P VMQ      VK FG+SG+TK+THL ++DTT   +   Q+  +  +   K+SG+  I+ N +KR+++
Sbjct:  187 DSDESEGEQMLKPIFVPKKARDTIREQEEKLKAMEERDQEAAKRAVEKKAESRKMVAEVLQREEAEAQ-HLMEVATDSEMPDDSDGVHPEQERQEWELREMRRLKRDRDARETRERDIQETLRRRNMTDEEREKEDLALGKLQEKEKKKWKFLQKYYHKGAFYVDDKSVKTDTDVRRRDADEPTLEDKLNRENLPTVMQ------VKNFGKSGRTKYTHLTDQDTTNFINP-LQDDELRAQYATKLSGLKPINPNPYKRQRR 440
[Close]
BLAST of mRNA_C-tenellus_contig1197.1.6 vs. uniprot
Match: D7FYL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL4_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 9.310e-40
Identity = 151/251 (60.16%), Postives = 173/251 (68.92%), Query Frame = 3 
Query:  342 MNFGKRDLAL-LSDTIGDADTLRFTRDDSELSGPQETLIPRRDPSKKIHIYRAGQAPGWVHDEEQAGQVDSLHSSKSGKGKAKYKAGRDAAMDAQLARLSLQNIHGRGKQDGEHLGKRAVHEAQVMQSSDSESDSDGPVFGGRSDDEGVEGDVIYRPTSEAADAGQVEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEKDPDGEQVLKPVFVPKAKRETAIER 1091
            MNFGKRDL L LS+TIGDADTLRFT+D SELSG QET  P+RDPS+K+HI+RAGQ P   +DEE+         SK  KG+++      AA++   A++             E    R++ EAQV+ S DS+SD  GPVFGGRSDDE  +GDV YRPT EAA AGQV   XXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXX     DGEQVLKPVFVPKA+RETA+ER
Sbjct:    1 MNFGKRDLGLVLSETIGDADTLRFTKDSSELSGKQETFKPKRDPSRKVHIHRAGQRPAGANDEEKV----EAPPSKPRKGESR------AALERARAKIM------------EEGRPRSIREAQVLDS-DSDSDDSGPVFGGRSDDE-ADGDVPYRPTGEAAGAGQVXXXXXXXXXXXXXXXXXXXXXXXXTEEAEVLEVEQDEXXXXXXXXXXXXXXXXXXXXXXXXXDGEQVLKPVFVPKARRETAVER 227
[Close]
BLAST of mRNA_C-tenellus_contig1197.1.6 vs. uniprot
Match: A0A3R7KM76_9STRA (MFAP1 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KM76_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.880e-39
Identity = 106/255 (41.57%), Postives = 159/255 (62.35%), Query Frame = 3 
Query: 1029 GEQVLKPVFVPKAKRETAIEREXXXXXXXXXXXXXXXQNXXRKRETRQLAAEVVQREEEMTENHLEDNESEGGAPDXXXDMDEELAYEEWKVRELGRVRKEKEEKERLVXXXXXXXXRRAMTDDQRRLEDAMMGKNQEKDKGKIKFMQKYYHKGAFYMDEESVKMKDDVRRRSYHEPTLEDKFDKTQMPRVMQASSKTQVKKFGRSGQTKWTHLANEDTTQRDSAWAQETHMATKMQHKMSGVGDIDNAFKRRKK 1793
            GE+++KPVFVPK  R T   ++               +   RK E+R+L AE +QR+ ++ +     + ++   PD    +D    Y +W++RE+ R++++++ KE+  XXXXXXXX        R  EDA + KN+ K+K K+KFMQKYYHKGAFY+D++S+  KDDVR R   E TLEDKF++  +P VMQ      VK FGR+G+TK+THLA++DT+ RDS W ++  +  K +  + G+ DID + KRR+K
Sbjct:  123 GEELMKPVFVPKKARGTVKGQKELDAEEERRQKREEEKINARKMESRRLVAEEIQRDLDVDK---AGDSTDVEMPDDTDGLDPAQEYRDWELREMRRIKRDRDRKEQXXXXXXXXXXXXXXXXXXRTAEDAKLKKNEPKEKKKLKFMQKYYHKGAFYVDDDSIHTKDDVRNREATEATLEDKFNREMLPTVMQ------VKNFGRAGRTKYTHLADQDTSGRDSLWGRKDGIREKYKSHLGGMKDIDGSTKRRRK 368
[Close]
BLAST of mRNA_C-tenellus_contig1197.1.6 vs. uniprot
Match: A0A835ZAT8_9STRA (Splicing factor, Prp19-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT8_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.210e-38
Identity = 201/624 (32.21%), Postives = 256/624 (41.03%), Query Frame = 3 
Query:  342 MNFGKRDLALL-SDTIGDADTLRFTRDDSELSGPQETLIPRRDPSKKIHIYRAGQAP--GWVHDEEQAGQVDSLHSSKSGKGKAKY--KAGRDAAMDAQL---ARLSLQNIHGRGKQDGEHLGK-----RAVHEAQVMQSSDSESDSD--GPVFGGR-----SDDEGVEGDVIYRPTSEAADAGQVEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEKDPDGEQ--------------------------VLKPVFVPKAKRETAIEREXXXXXXXXXXXXXXXQNXXRKRETRQLAAEVVQREEEMTENHLEDNESEGGAPDXXXDMDEELAYEEWK------------------------VRELGRVRKEKEEKERLVXXXXXXXXRRAMTDDQRRLEDAMMGKNQEKDKGKIKFMQKYYHK-------------------------------------------------GAFYMDEESVKMKDDVRRRSYHEPTLEDKFDKTQMPRVMQASS-----------------------KTQVKKFGRSGQTKWTHLANEDTTQRDSAWAQETH-MATKMQHKMSGVGDIDNAFKR 1784
            M F KRDLALL  D +GDA +LRFT D S  + P E L PR DP+KK+ IYRAGQ P  G  H +E+ G          G  +A     AG  A + A L     LS++              K     R V EA+V++ S SESD +  G    G      +D+  VEGDV      E          XXXXXXXXXXX                                    XXXXX  DE + D E                           +LKPVFVP+ KRET ++ +               +   +KRETRQL AE ++R++E +   L+   S+G  PD   D D  L  E WK                        VRE+ R+ ++KEE+E L         RR +T+D+RR ED  +GK   K+K K KFMQKYYH+                                                 G FYMDE+SVK + DVR R     T EDKF+   MP+VMQ                             V  FGRSGQTKWTHLA EDTT     +      + +K++ KM+G GD+D  F+R
Sbjct:    1 MEFTKRDLALLLPDQVGDAASLRFTADASADAAPAEMLKPRIDPTKKVVIYRAGQVPNFGANHQDEEGGTRRRRKGWDKGATQAAVAPSAGEGAGVGALLEGFGPLSVEEQDDXXXXXXXXRSKARXRARLVVEAEVIEGSASESDGELEGAYQKGAGKRRDADETPVEGDVAVGQADEQXXXXXXXXXXXXXXXXXXXXAASAGPDKAAEEAKARQRAEAAVLEEPGGAEEEEGEXXXXXGSDEWETDSESESEADXXXXXXXXXXXXXXXXXXXVALLKPVFVPREKRETLLQAKALEDAARARAHKDAQELERKKRETRQLVAEEIRRDQEKSVAVLDGGGSDGELPDDTDDPDSILQLEAWKXXXXXXXXXAGARDAAPHELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKGAGKEKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEPFLMSDRTIRSKLESKMAGTGDVDAPFRR 624
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1197.1.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYL5_ECTSI1.760e-8375.51MFAP1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2CMS0_9STRA1.120e-5347.43Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2CP46_9STRA2.320e-5150.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2SCR4_9STRA4.570e-4945.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5D6XW28_9STRA1.610e-4346.54MFAP1 domain-containing protein n=1 Tax=Pythium br... [more]
W4GXR7_9STRA2.070e-4040.08MFAP1 domain-containing protein n=10 Tax=Aphanomyc... [more]
A0A485L535_9STRA5.870e-4040.08Aste57867_15717 protein n=1 Tax=Aphanomyces stella... [more]
D7FYL4_ECTSI9.310e-4060.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A3R7KM76_9STRA1.880e-3941.57MFAP1 domain-containing protein n=3 Tax=Phytophtho... [more]
A0A835ZAT8_9STRA1.210e-3832.21Splicing factor, Prp19-binding domain-containing p... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1197contigC-tenellus_contig1197:2703..13066 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FYL5
Preferred nameMFAP1
PFAMsMFAP1
Model size3489
Max annot lvl2759|Eukaryota
KEGG koko:K13110
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0001527,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007346,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010389,GO:0010467,GO:0010468,GO:0010564,GO:0016070,GO:0016071,GO:0019219,GO:0019222,GO:0031012,GO:0031323,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043484,GO:0044237,GO:0044238,GO:0044420,GO:0044421,GO:0044424,GO:0044464,GO:0046483,GO:0048024,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051726,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0099080,GO:0099081,GO:0099512,GO:1901360,GO:1901987,GO:1901990,GO:1902749,GO:1903311
Exons12
Evalue1.65e-89
EggNOG OGsKOG1425@1|root,KOG1425@2759|Eukaryota
Ec32 ortholog descriptionSplicing factor, Prp19-binding domain containing protein
Ec32 orthologEc-26_002680.1
DescriptionRNA splicing
Cds size1467
COG categoryS
BRITEko00000,ko03041
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789202.4331899-UTR-C-tenellus_contig1197:2702..43831680789202.4331899-UTR-C-tenellus_contig1197:2702..4383Choristocarpus tenellus KU2346UTRC-tenellus_contig1197 2703..4383 -
1680789202.5818884-UTR-C-tenellus_contig1197:12725..130661680789202.5818884-UTR-C-tenellus_contig1197:12725..13066Choristocarpus tenellus KU2346UTRC-tenellus_contig1197 12726..13066 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789202.4446437-CDS-C-tenellus_contig1197:4383..44711680789202.4446437-CDS-C-tenellus_contig1197:4383..4471Choristocarpus tenellus KU2346CDSC-tenellus_contig1197 4384..4471 -
1680789202.4534762-CDS-C-tenellus_contig1197:4769..48641680789202.4534762-CDS-C-tenellus_contig1197:4769..4864Choristocarpus tenellus KU2346CDSC-tenellus_contig1197 4770..4864 -
1680789202.4631553-CDS-C-tenellus_contig1197:5787..59101680789202.4631553-CDS-C-tenellus_contig1197:5787..5910Choristocarpus tenellus KU2346CDSC-tenellus_contig1197 5788..5910 -
1680789202.4772809-CDS-C-tenellus_contig1197:6211..63551680789202.4772809-CDS-C-tenellus_contig1197:6211..6355Choristocarpus tenellus KU2346CDSC-tenellus_contig1197 6212..6355 -
1680789202.4856973-CDS-C-tenellus_contig1197:6556..66371680789202.4856973-CDS-C-tenellus_contig1197:6556..6637Choristocarpus tenellus KU2346CDSC-tenellus_contig1197 6557..6637 -
1680789202.4953418-CDS-C-tenellus_contig1197:8144..82761680789202.4953418-CDS-C-tenellus_contig1197:8144..8276Choristocarpus tenellus KU2346CDSC-tenellus_contig1197 8145..8276 -
1680789202.510388-CDS-C-tenellus_contig1197:9138..92461680789202.510388-CDS-C-tenellus_contig1197:9138..9246Choristocarpus tenellus KU2346CDSC-tenellus_contig1197 9139..9246 -
1680789202.5225089-CDS-C-tenellus_contig1197:10508..105871680789202.5225089-CDS-C-tenellus_contig1197:10508..10587Choristocarpus tenellus KU2346CDSC-tenellus_contig1197 10509..10587 -
1680789202.5341651-CDS-C-tenellus_contig1197:11066..112441680789202.5341651-CDS-C-tenellus_contig1197:11066..11244Choristocarpus tenellus KU2346CDSC-tenellus_contig1197 11067..11244 -
1680789202.5464354-CDS-C-tenellus_contig1197:11508..116161680789202.5464354-CDS-C-tenellus_contig1197:11508..11616Choristocarpus tenellus KU2346CDSC-tenellus_contig1197 11509..11616 -
1680789202.55891-CDS-C-tenellus_contig1197:11769..120171680789202.55891-CDS-C-tenellus_contig1197:11769..12017Choristocarpus tenellus KU2346CDSC-tenellus_contig1197 11770..12017 -
1680789202.5708272-CDS-C-tenellus_contig1197:12642..127251680789202.5708272-CDS-C-tenellus_contig1197:12642..12725Choristocarpus tenellus KU2346CDSC-tenellus_contig1197 12643..12725 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1197.1.6prot_C-tenellus_contig1197.1.6Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1197 4384..12725 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1197.1.6

>prot_C-tenellus_contig1197.1.6 ID=prot_C-tenellus_contig1197.1.6|Name=mRNA_C-tenellus_contig1197.1.6|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=489bp
MNFGKRDLALLSDTIGDADTLRFTRDDSELSGPQETLIPRRDPSKKIHIY
RAGQAPGWVHDEEQAGQVDSLHSSKSGKGKAKYKAGRDAAMDAQLARLSL
QNIHGRGKQDGEHLGKRAVHEAQVMQSSDSESDSDGPVFGGRSDDEGVEG
DVIYRPTSEAADAGQVEEDEDDDAIAARRARVRERLRARRATEAEVLEVE
LEEPTKPEDSDSSEWETDTDVSQDEKDPDGEQVLKPVFVPKAKRETAIER
ERQRKEEEEKQRKRNIQNENRKRETRQLAAEVVQREEEMTENHLEDNESE
GGAPDDDDDMDEELAYEEWKVRELGRVRKEKEEKERLVKEKEDTERRRAM
TDDQRRLEDAMMGKNQEKDKGKIKFMQKYYHKGAFYMDEESVKMKDDVRR
RSYHEPTLEDKFDKTQMPRVMQASSKTQVKKFGRSGQTKWTHLANEDTTQ
RDSAWAQETHMATKMQHKMSGVGDIDNAFKRRKKVTMT*
back to top

mRNA from alignment at C-tenellus_contig1197:2703..13066-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1197.1.6 ID=mRNA_C-tenellus_contig1197.1.6|Name=mRNA_C-tenellus_contig1197.1.6|organism=Choristocarpus tenellus KU2346|type=mRNA|length=10364bp|location=Sequence derived from alignment at C-tenellus_contig1197:2703..13066- (Choristocarpus tenellus KU2346)
ATTTCACATTATACTTGCGGCGGCGTATCAGTCATAGACCCAGTGCAATG
CCCAGTGATTTCCGTTGGTCCCCCTAATCCCCCAACCCAATCTGTCTCTC
CACTAACCCTTCGTATCCGTATGATCACTCTGGTATTCCGTACGGAATAA
CCATACGCCCTGATCCATCCACACCTCTCTCGTCCTTCTCACCTAAACCC
CACTGTTACATTGCTACAACAGAGGATATGTACCAGGGTTACTAGAGCAG
GAAAGACGGCTAGGTAGTGCATGGTCTTCCGTTTTTGGTGGAGACAAGGT
TTTATTGGAGCACGTTCTTTGTTTGGATCCCAACGTGAACAATGAATTTC
GGGAAGAGAGACCTGGCACTGCTCTCTGACACGATTGGGGATGCCGACAC
TTTGAGATTCACCCGCGATGACAGGTGGCTCTCTATTTATCTTTAATATG
CTGAGTGGACTTGATGTGAATACGGGCGTATCCAATAAGTGAACGTGCGT
GTTAGGCATGGGCGGGGCTACTCTTGAGTACCCAGTCCTTAGTGACTTTC
ACTCAGGATGCACCTGGTGGTTGATCGAAATCCGTGCTGATACATGTGTA
TATGGATAGGTGAAACTGTTTCATCCCTTACGTCATAGCTTTGAACACCT
GCGCCAACTGCTAAGGGTATTCCATGCAGCTCCGTGTCAAGTATTTCCTA
CACAGAGACTCCAGCTTCCAACTTAACCTCACGTTCTCATATAGTATTCA
AGGTTGAGAAATACACGAAACATGCAGGTTTCCCAGCAAAACTATTATTT
GAGGAAAAAAAGATGATGACTAGTGACCTCGAAGAGTGTGTGCTGCCTCA
ACCCTTTAAAGTGCGTAACATGTTCGACTAACTGGAAACCTTGTTGTATT
CGATCATTTCTCAAGTAGGAACCCTTCTAGTAGTTGATCTGATTGCCCTT
GCCCATAATAGCTATTTTTCTTGGCGAGATGCCCCGAAAAAGTGGATGTA
CTCTGCAGGCATAATGTATTCCCATAACCCCACACGCTGCAATCCCAAGT
GAGCTTTCTGGACCTCAGGAGACTCTGATACCTAGGCGAGACCCGTCCAA
GAAAATACATATCTACCGTGCTGGCCAAGCACCAGGTTGGGTCCATGATG
AGGAACAAGCCGGCCAGGTCGACTCCCTTCATTCCTCCAAGTCTGGTAAG
GGAAAGGCTAAGTACAAGGCCGGTCGGGATGCAGCTATGGATGCCCAGCT
GGCAAGATTATCTCTGCAAAACATACATGGAAGGGGAAAACAGGATGGTG
AGTGTAGAGTAAACCCGACAAGTCTTACCATTGGGCAGATCAAACGATGG
AACAAAATTATCTCACCTGTTTGTTTGCTTTTTCCAGTCTAGTAGTTCAA
TGTGGTTTCCAACGACTTGATCTTGTGTTACATTGTGATTGCCTTTGTAG
GTGAGCACCTGGGGAAGCGTGCAGTTCATGAGGCACAGGTGATGCAGAGC
AGTGATTCTGAGAGTGACAGTGATGGACCGGTATTTGGTGGACGCTCTGA
TGATGAAGGTAAGTGAAGCTTCTCCATTGGTCAAACCAAAATGTCAACCG
CATGGTGTGCAGTCAGAGGGGGAATCAAACTAATTCTTGACAGTGTATGG
AAATGGTCATGCTTCCCGACAAATGCAGTGTCTGCCAATCTCAATGCAAG
ATGCCTGTATGCCATTGATATGGATCTTGTGGGCCAGCTCTTGCAGACAA
TATGAGCAGAAAGCATTCTCCACTGCTTCCAAATCAATGCCAGTCACTGC
TCACACTTACCTGCTTGAGTAGGAGTGGAGGGTGATGTCATTTATCGCCC
AACAAGTGAAGCAGCTGATGCAGGCCAGGTTGAGGAGGATGAGGATGATG
ATGCTATTGCAGCACGGAGGGCACGTGTGCGGGAGCGACTGCGGGCCCGG
CGGGCTACTGAGGCAGAGGTCCTGGAAGTGGAGCTAGAGGAACCTACCAA
GTGGGTTGATAATTCATAATGCCTTGATATTCTTGTAGCAGTAGAGCTAT
ATGTTATGAATACGAGGTGGTTTTGAGACAATCATGTGGGCTTGTACAGG
CCAGTGCCTTGAGCATCTTTTAGAGAGAGAAAATTGAGCCAATTATTGGA
AATACAGGTGTGGCATAGGTGCTTGTTATTTGTGGGTTGCTGTTGTTGTT
TCGATTCCACCCACAAAATATATACTAGATTTCTATGGGGCCTCAAAAAT
ATGTATATCCTGTTATGTGCAACCCCTGCCTGCTGCCGTGGTTTGTTAAT
CCACCAATCAAATGATGCTGTGTAGATATCAATTTTTGCCTTAAGAAGGT
GACTCAACTTGTCGAATACACCTAAAGTGTTGAGGCATTGGCCTGATCAA
TGTTGTTTCCTCCCCCCCCCCAACCCTTGTTATTTGTTGCTACTCATGCC
TGAACACGTTTATTATGTGTCATTGGAAGGCCTGAGGATTCTGATTCGTC
TGAATGGGAGACTGACACAGATGTTAGTCAAGACGAAAAAGATCCTGACG
GAGAACAGGTACATCACTGGGAATACTGTGTGCTGGTATAGGTAGTGTTG
ATGGTATTGTTGTATGTTATATGCTCTAAGGATGTAACCCTCACTATTAC
CCTAAAGCTGCTTTGCCCTTGAAAGAAGTGGTGTGTTGTAAGTGCACTGG
GATAGGAATAGTAAAAGGAGGAAGGTTTATCAACTCAGTGTGCTGTTTGC
TCACACCTGGTGCTGACTTGTGATTCTTAGGTAAGGATATGACCCAACGC
TTCCTGCTTTACTATTGCCAGACTTACAATTTGTGGTGTTGTGATGTAGT
TAATGCAGTGGCCAGTGCACTGCATGTATGCAATCACTACCGCATTGCCC
ACATCTGCATCATTGAAATTCTGGACCTTGCCTGCATGACTTTGATTTTT
ATCAATTATGTAATCTCTTACAGTTTAGTAAATTTGTACCCTGAAAAACC
TCAACTATGGGCATATGGTGCATTTAAAACTGGGATATGGTGCATTTTTA
ACTGGGATATGGGATATAACAGCCAATTTGTGACCTGATCTTTTTTTGGC
AGAGCAAGTACCAACTCCTGAGCGTAGTGTTTGCCATATCCAACTTCCTG
TTCAAAAGCTGGATTTTCTCCTTTTTGTGGTTACACATCGTAGACCCATG
TACTGCCAACTTCTATTGGAAAAAAGGGTAGTTTTTGTTTTCACAAAGTA
TATAGCTATATGGTGTGTACCCACAAATGTAAAAAAAATAATCTTTTGAA
GTATCAGTCAGTTATGGCAAAACTATTGTACCCATGTGTACGTAGTTGCT
CCGCAATGTAAAATAATAAGAATAATGCCAAAAATTGGCCTCAAATAAAA
CCAAGAAATATGGCAGAGTATGCCTGCATTTGTAATATTTCAGGGAAAAG
CTTTTTGAAGCTACACAAAATAGAAGTAGTGTAGCTATCCTTTGCTCTCC
TGGATTGCCCCTTTCTTAGAACCTGATTGTTGCATCCTCTAGAGCTGTTC
ACTTCCTTGACTCTTCCTTTTTGTCTCCTCATGTGTGCTCTTCTCCCCTA
ATTACTTGGGATGCATTCTGTAGTACTTTGTAGTCGCTGTTATGTATTGA
TAGGTGTGATATTGCTTAGGAAACGAGAAGAGCAGGGGTGTTTCACCAGC
GAAAAAAGCAGTAGCTGCAGCAACACTTGGGGGTCATTACACAAGGATGT
TGAGAGATGCTGTGTTGTCCTCCACCGTACCACTTGATGCATTGTCTTCC
CTCATACCACTTGAGTGTAGGTGTTGAAGCCTGTGTTTGTGCCAAAGGCT
AAGAGGGAAACAGCGATTGAACGTGAACGCCAGCGGAAGGAAGAAGAAGA
AAAGCAAAGGAAGCGGAACATTCAGAATGTGAGGGGGGAAATGCTGTGGG
GGGGGGGGATGGTTCCCACAGTACAGTGTGTTGGGAAGTTGTCAAGGGAG
GGTTGAAGGCTATTGAAGTGAAGGATGCACATGGTTGAGGTTCAATAGTT
CAATGAGGTGGTGATTGATGCCAAGGAGGAGAGTGGCTGCAGAGATACAA
AGGGGGGTATCGAGGAGAACGTACCTATGAAGGAAATTTGACAGAGCGGA
GTCAAAGGTTGACCCTATTGACCTCACGTCGATGTGTGTGTGGGTCACAC
AGGGCCCAACCCTTGGCGTGATTCGATGTGGCTTGGTTTGGCTTGGTATG
GCTTGGTGTGACTTGTGTTTTGGAGTGCTGTCCATCACAATTAGGAGGCA
GTTCCCTTACATAGCCCAGTCCCAGTCAGGCTTGTGACGATACAAGGTAC
TCGTTTTTGTCTACAGTCTACAAATGTCTCCTCCTATGAAGTCGGGTTCT
AGTAGGTCAAGTTTACAATTGGATCTTTAGCCCCTAGCACCATGAGGTGT
AGTCCAAGATGCTGATGTGAAGTTAAAAGTAGTAAAGTACCAACATTTTT
GTGTTACGTATTTCATGTATTGATGTATCGATTTCATCTTGGTTCATTAC
GTATGAGGATACTAGCGAGGACCCTGCCGTTACACAATAATAGTCACGCT
CACACTGTGTGTCTGTAAGAACCCTAACCCTATTTGAAAAGAAGACTGAA
TGTTCACCAAAAACACGAATGCCTTTTTCAATTCTTCAATTCCAAATGCC
GTTTCTTGTGAGCCCGCATCGACTTGATTGCTCTCCCCCTCTCTTGCCAT
TGTTAACACACCGGGAACTTCTTTTTTTTTACCATGGCAGGAAAACCGAA
AGCGAGAGACGAGACAATTGGCGGCAGAGGTGGTGCAAAGAGAAGAAGAG
ATGACAGAGAACCATCTAGAAGACAATGAGAGCGAGGGAGGTGCTCCTGA
TGATGACGATGACATGGATGAGGTACATGTGTCCCACATTTGCTGGTTTG
TGTTTTTGTGTGTTTGTTTGTGGGGGGAATATTCTTGAGAAAAATTAGAT
GTGAATTTTGTTGGTTACTTTTGCTTGTTAGTCAAAGGCATTCTTGTATG
TTATTCAAAGACATTCTTGTATGGGTCTGCCTTTTCGTGGAACTAGCCTC
TGGCGTGGAATGAGTTGAACGTAGTTGTGGGGTGTGATGCGAGGGTAGTA
TAGTCCGTGTTGAGGGGTTAGGGGTCAGGTTTGACTTGGAACGTTGGTTG
TGTTTCACATGCATGAGCACATTATTCATTCTTTGATTGTATTGTATTGT
ATTGTATTTGGTGTGAATTTTTTGTGACAGGCGTACAAAAAGCTACTCCA
TTTTGCCAGCCAGACTGAAGACATCCAATTTTGTACACAACATTATACTC
AACAAAACTACAATGTGTGCAAGGTCCAATAAATCTCACTCTTACAGGCG
TAATAAAAGTAGGTAGCTAGAAGTAGCAACTTGGTAGCTAGAAGGGGACA
GCTGTTATCTCTGTGCTATTTGGTTTGCTCATTGTAAAACACCCCGTTTT
TATTTCAAGGTCTGTGGTGTATGGCTCTTATGTTTTTTTCCTATACAAAT
ATGTCTGTTACAAATGTCTGTTGGCTTTTGAACGACAAGTGGAGCATGAC
AACTGCCACTCCTATGTGTACCCATGTGTGGACACTTGCTCCGTGATGTC
AATTAAAAAATCAGAACACAGATCAGCCATGCTTAGCCTGAGAAAACTGA
AGGCAAAGCCTGCGCTTACGATTTTTTAAGAAACGTTTTTCTTGTGACTA
CAAGAAGAAACCTCAGAATTTTTGTGTTTTGTACAACCTGTCATTGAGTG
TCCCCACAGTCTCCCTCTTGGGGGTGCTGAGTGTCCCTTCTATGAAGGGG
AGTAATTGAAGTCTCCCTTGGGTTTCCCTTGGGTTGATGACGTTGATCAA
TGGGAAGAAAGGGGCGTCATGTTCCTTAGTGGAAGTTGAAGTTTTTGCAC
AGAAGATGTGGTTGTTTGGCCTTTTTGTTGCTATCACAGTGGAAGTGTGG
TGTGTTGGTGTCACCAACTTGGTCGCGGTTGAGCACTCTGTACCAGGGTG
CCATTCCTATTGGGACTAGTATGATCAATTGAGACCATCCTCAACACGCG
CGATTATCTTTCCCAGATTTATCGCCTACTACATAGTGCTATGTAGTGCC
ATGTATTGTATGCTACATGGAAATGGTACTGGGATTATGATGTCCCAGCT
CCTCAACATCATTTTTATTGCTGTTTTTGTTTACATGAGAGAGTGACCAC
ATTCTACAGGTGTAACACATTCTACATATGTTGCTGTTGGTAATACCTCC
CTTCCCCCCCTCCCTTCTCTGTGGGTTTTTGTTAAGCCACCTCACTTATT
TATGTATCCATTTCCTATGACAACAATATTCCACCCTGAACCTCAGCTCC
ATATGCTTGTGCGCTTGTGTGTCCTGCAGGAACTAGCATATGAGGAGTGG
AAGGTGCGGGAACTGGGACGGGTGCGAAAGGAGAAGGAGGAGAAGGAACG
CCTTGTCAAGGTGTGTTCTCTGACTACCTTGCCTTGTTGTCCTTGCTTAC
CAAAAAGGGTGCATACGGCGTCTAACTTGTGGAGCAAGGATGGATGGGAG
TGTTGCTGCAGGAGGGAGGTTAGGGAAGTGTGGAATTGATGAGCAAGTAG
AATTGTGTTACATCTTACATGTGGCATTGATAAATATGCGGGTTATGTAT
ATAATTGTTAGGAGAAGGAGGACACTGAGAGAAGAAGAGCAATGACAGAT
GATCAAAGGCGGTTGGAGGATGCAATGATGGGCAAGAACCAAGAAAAGGA
CAAGGGCAAGATCAAGTTCATGCAAAAGTACTACCACAAGGGTGCTTTCT
ACATGGTGAGTCACCACAGGTGTTGTCAGTGGAGGGTGTATCTTATGCCT
CAAATTTGCCATGGGTACCCCATAGCACCCTTGTGTTCTAGTCCCCACAT
TAGTTCATTAGATCTACTTTCCCCCAAACCTTACGTTGATTTAGTCATGA
AGTCAGCCTGGGCAATTAGAATCTAGTAGTTCTGTTCATGGCAATGCTGT
GAAATGGCATCCTTTTTTAAAATAGGAACTATCTAACCTCTGCATTCAGA
AATTGGGATTGGCTATAACTGTTAACGTGTCCTTTTGATGGAATGTGGGT
TGTCAGGATGAAGAATCGGTGAAAATGAAGGATGACGTGCGTCGACGAAG
CTACCATGAGCCAACACTGGAGGACAAGTTTGACAAAACACAGATGCCAC
GTGTCATGCAGGCAAGTTCCAAAACACAGGTGCTAGCTAGCTGGCACGAT
GTTTTGTGGTTGACTTAGGCTGGGGGGCATCTTGCATGTCTCGCTCATGT
TTTTTGTACACTATCCATGGTCATACATATTTTTGGTTTTTGTGTTTCTT
TTTTGAAACGTAACGTCTTCCGGTTCTTCTGTACATTTTGGGGGCACTGT
TGTTACTATTTAGGGCAAAACTTGAACATATTATATGAGCTTCATAATCT
ACTGTACTACCTACCTGTACTGGGGGTATGCTGTTGAAATTTGAAATGTT
AGTGAGAACACCGTATGTAGAATATATGTGAGATATATTATTTCTTACTT
TTTTCCTTGTTTGTAACATCCTATATTCTATATACTCCTTCCATAGAGTG
AAGCACATTGTAGTCACTTTTTCTTGCCTCTTGAAGTATGTGTGATCTGG
ATGTTTCCTTGCCACAGGAAGTTGGTGTTTGTGTGACATGGGGATGTGAT
GGGTTGACCCTGCTTGAGAGCAAGAGTACTATCTGCACACTACCTTGCTG
CAGCCATGCACAACGCACCAGCCAACTTAAACATGCACATGTATCATTAG
AACAGAAAATTCCCCTTTACGTGACAGTTACGAGTGCCTATGGAAAAGTT
CCACAACAAAAAAAATGGAGTTTTTGGTGATTTTCAACCCAACATACTAC
AAATTAACATTTGCAACAATTCTAGGGGAGAAATAGGAACAAAAATTTTG
AATGTACAAGTTTTGTCATCGGTACTGTACTCTGCTCTTGTTTGAAATAG
CTCTCAATGCAGGTGTGAAGTGTTGGTGGGTCAACTGCTGTGGTGTTCTT
GTATATACTATGTGTCTTGGAGGGAATCATGTGCATCAAGTGAGTTGTTA
AACCGAGCCATGTTGGTTACCCTACCTACAATGACCTGTTGATGTCATCC
AGGTGAAGAAGTTTGGTCGTTCAGGGCAGACCAAGTGGACACACCTTGCA
AATGAAGACACCACACAACGGGACTCAGCATGGGCACAGGAGACACAGTA
AGTACCCGCAAGGAGAATTATACTTGCAATGCTGGTGTGGAGGGGGGTTG
TGGTGCAAATCTCGCCAACATAAAGAAACAGACATGTGTCACGGACCAAT
TGAAGTTTACGTTTAGCTGCAGGTATAGTATCATGACAGGTGCTGTGCAG
TCAGGACCCTAATCAGTGCATCATAATGTTTGATGTTTATCAATAGTGTA
AACTGCTCTCTGACCTGTGTGATTATTTTTTCCAATTGTTCTGTCTTGTC
TGTGCTTGTCTGTGTTGGTCTGTGTCACCATTCTCTTCGTCAAAGTATGG
CGACAAAGATGCAGCACAAAATGTCTGGAGTTGGGGACATTGATAACGCC
TTCAAGCGACGGAAGAAAGTCACCATGACATGATACGACCAAACAGACAT
GTGGATATCATGTTGAAGATCGTTAAGCCTGTGCTCCCTTCCTTCTTCCT
GCCACCCTGCCATCTCACTCAATGGCCTCTCACCATCAACTATGTTCCTC
CTCTTCACAATTCTTTATACTATCAATTATGGATTCTCTTTTGCCTGTGT
CCATGTCAGCTGCATAGCTGTATGTGATCACGTAGCCAGATTTATGTAAT
GGCTTTGTTTTGCAAATGGATCAACAGTGTACAAGCAAAGCAGTTCAGAG
AGAAATGGATTTCAGAACGGGGTTTCAATCGACTGTACTTGAGGGCTTAC
CTTCTGGTCTATTTTCAAGGCTGCAAGGAATGTCATGAGCTGCATACTCA
ACATATTGCAGCTATGTTGGTCAGGTCTTTTGCAAGAGCTTTAGTGAACT
ACACTCATTTTCGCAAAAGTATCAGCATAGGGCAATGCCTGCACACTCAC
AGCAGGATCTTCGACCAAACCAAAGTCAGACCTAACCCATACATTGAGGT
GTGAGGTTTGTATTTGTGATCCAGCCCACAACTGGAACACCACTCTGACC
TTGGCATACAACCCCAACGCATTCATTCCCTGGCTGTAAGCTCCCTACCC
TACATAACTATTGTACTATCCCTGAAAGCCCAGTAGTTGAGTAGTTTAGG
CAATCTCACGTGTACAATTTTGCTTGTTCCACACAAGCAAGCTCGAATGT
TGATTGTTGAGTCTTCTTTTAGATTGAGTACCAATGAACGCTCGAAACAT
TTGTGGAGGTGAGGTGCTCTCAATGATGCAGTACCCGATCAAGGGAGTTT
GGGAAATATACTCAGTGACTAATGACAATCTGTCGGATTAGGGAGCGGGA
TTAACGATCTGTTGCAATATGAATAAGGTCTCTGTTAACCCTCCCCTACA
CTTACATGGTGTCTTTTAAGTCCAGTTTCTAGAAAGTGGGAAGAAATGAA
TTGCATATAGCCATTTTAAGGGGGGGTTGGATGGGGGGTAGGGGAATCCT
TAAGGTGGATGTACGAACCAAGATGATCCCAGAAGCGTGAAATGGAGTTT
GTATGTCTAACAAGGATTTAAGCTCCTCCGAGGATACTCTTATATAGACC
CATCAGGTCTATTTCAATTTGTCCTCATATATCTACATTATTGAAGTTGA
ACAATGTTCCCCAGCAGACGTGAGACCTGATTTGTCTTGGTAATTGTAAC
TAACTGCCATGTGGAACTCTTGCTCATAGGCTGGGCTTCTGACGATTGTA
AAGGGTACTACTTGATCGTGGATGCATTGAGACATTTTAGGAAAATTTAT
GTCTGACTTGCTCTCAGAGATGCCAAGAAGAGGTGTGATGCTGTATATTG
AGTAAGTATAGAAAGGAGCCCTTAGGGATAACATATTGTAATCACCTGTA
CATCATGTGGCGAGAGGGTGTAAGCTGCAGTGTCAGTTGGGTGATGTTGG
CCAGGGCTAAGGACTCTGAAGAAGGGTGTGAGGGAGACACTCAGTTCTCA
TTGATGCAATTGAGGTGTCAGCTAGGCCATGCACACTGTTGAGTTCATAT
ATGTGCGATGACCTATTTTGACTCCCTGGAAACAAGTACTGGATATTTGT
ATGATGAGGCTCTGCAAAGATAAGGAGGCCACTTGTTTTTAAAACAGAGT
TCTTACTTACTGTG
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig1197:2703..13066-

>mRNA_C-tenellus_contig1197.1.6 ID=mRNA_C-tenellus_contig1197.1.6|Name=mRNA_C-tenellus_contig1197.1.6|organism=Choristocarpus tenellus KU2346|type=CDS|length=1467bp|location=Sequence derived from alignment at C-tenellus_contig1197:2703..13066- (Choristocarpus tenellus KU2346)
ATGAATTTCGGGAAGAGAGACCTGGCACTGCTCTCTGACACGATTGGGGA
TGCCGACACTTTGAGATTCACCCGCGATGACAGTGAGCTTTCTGGACCTC
AGGAGACTCTGATACCTAGGCGAGACCCGTCCAAGAAAATACATATCTAC
CGTGCTGGCCAAGCACCAGGTTGGGTCCATGATGAGGAACAAGCCGGCCA
GGTCGACTCCCTTCATTCCTCCAAGTCTGGTAAGGGAAAGGCTAAGTACA
AGGCCGGTCGGGATGCAGCTATGGATGCCCAGCTGGCAAGATTATCTCTG
CAAAACATACATGGAAGGGGAAAACAGGATGGTGAGCACCTGGGGAAGCG
TGCAGTTCATGAGGCACAGGTGATGCAGAGCAGTGATTCTGAGAGTGACA
GTGATGGACCGGTATTTGGTGGACGCTCTGATGATGAAGGAGTGGAGGGT
GATGTCATTTATCGCCCAACAAGTGAAGCAGCTGATGCAGGCCAGGTTGA
GGAGGATGAGGATGATGATGCTATTGCAGCACGGAGGGCACGTGTGCGGG
AGCGACTGCGGGCCCGGCGGGCTACTGAGGCAGAGGTCCTGGAAGTGGAG
CTAGAGGAACCTACCAAGCCTGAGGATTCTGATTCGTCTGAATGGGAGAC
TGACACAGATGTTAGTCAAGACGAAAAAGATCCTGACGGAGAACAGGTGT
TGAAGCCTGTGTTTGTGCCAAAGGCTAAGAGGGAAACAGCGATTGAACGT
GAACGCCAGCGGAAGGAAGAAGAAGAAAAGCAAAGGAAGCGGAACATTCA
GAATGAAAACCGAAAGCGAGAGACGAGACAATTGGCGGCAGAGGTGGTGC
AAAGAGAAGAAGAGATGACAGAGAACCATCTAGAAGACAATGAGAGCGAG
GGAGGTGCTCCTGATGATGACGATGACATGGATGAGGAACTAGCATATGA
GGAGTGGAAGGTGCGGGAACTGGGACGGGTGCGAAAGGAGAAGGAGGAGA
AGGAACGCCTTGTCAAGGAGAAGGAGGACACTGAGAGAAGAAGAGCAATG
ACAGATGATCAAAGGCGGTTGGAGGATGCAATGATGGGCAAGAACCAAGA
AAAGGACAAGGGCAAGATCAAGTTCATGCAAAAGTACTACCACAAGGGTG
CTTTCTACATGGATGAAGAATCGGTGAAAATGAAGGATGACGTGCGTCGA
CGAAGCTACCATGAGCCAACACTGGAGGACAAGTTTGACAAAACACAGAT
GCCACGTGTCATGCAGGCAAGTTCCAAAACACAGGTGAAGAAGTTTGGTC
GTTCAGGGCAGACCAAGTGGACACACCTTGCAAATGAAGACACCACACAA
CGGGACTCAGCATGGGCACAGGAGACACATATGGCGACAAAGATGCAGCA
CAAAATGTCTGGAGTTGGGGACATTGATAACGCCTTCAAGCGACGGAAGA
AAGTCACCATGACATGA
back to top