mRNA_C-tenellus_contig11759.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11759.1.2 vs. uniprot
Match: D8LKL8_ECTSI (GPA2, alpha subunit of a heterotrimeric G protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL8_ECTSI) HSP 1 Score: 166 bits (421), Expect = 1.010e-41 Identity = 79/111 (71.17%), Postives = 89/111 (80.18%), Query Frame = 1 Query: 289 NVFRMGEAIELFREICLNPYFERSSIILFLNKKDLFAEKIPVKDISTVPEWSDFRGPCTFDKGVNYFLEKFLSSNITSKTVYHHVTCATDSENIRVVFNSCKDTILRNNLR 621 N RM EA+ LF+ IC N YF+RSSIILFLNKKDLFAEK+ I+ EWSDF+G CTFD+GV+YFLEKF ++N KTVYHHVTCATDSENI VVFNSCKDTILR N R Sbjct: 236 NTNRMTEAVNLFQGICSNSYFKRSSIILFLNKKDLFAEKLATNPINHTKEWSDFKGACTFDRGVSYFLEKFNAANTAKKTVYHHVTCATDSENIEVVFNSCKDTILRINFR 346
BLAST of mRNA_C-tenellus_contig11759.1.2 vs. uniprot
Match: A0A6S9GNU7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GNU7_HETAK) HSP 1 Score: 141 bits (355), Expect = 4.760e-35 Identity = 71/116 (61.21%), Postives = 86/116 (74.14%), Query Frame = 1 Query: 298 RMGEAIELFREICLNPYFERSSIILFLNKKDLFAEKIPVKDISTVPEWSDFRGPC-TFDKGVNYFLEKFLSSNIT-SKTVYHHVTCATDSENIRVVFNSCKDTILRNNLRTSGFMD 639 RM EAI+LF EIC N YF SS+ILFLNK+DLFAEKI +KDI V ++DF G F+ GV YFL FL N + +YHHVTCATD++N++VVFN+CKD ILR NL+ SGFMD Sbjct: 53 RMVEAIDLFAEICNNRYFHNSSMILFLNKRDLFAEKIMIKDIKAVMHFNDFPGGLGDFELGVQYFLNLFLKVNQNPERVIYHHVTCATDTQNVQVVFNACKDIILRGNLKDSGFMD 168
BLAST of mRNA_C-tenellus_contig11759.1.2 vs. uniprot
Match: A0A7S2XUR0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUR0_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.890e-33 Identity = 73/116 (62.93%), Postives = 86/116 (74.14%), Query Frame = 1 Query: 298 RMGEAIELFREICLNPYFERSSIILFLNKKDLFAEKIPVKDISTVPEWSDFRGPC-TFDKGVNYFLEKFLSSNIT-SKTVYHHVTCATDSENIRVVFNSCKDTILRNNLRTSGFMD 639 RM EAIELF EIC N YF SS+ILFLNK+DLFAEKI VKDI V ++DF G F+ GV YFL FL N + +YHHVTCATD++N++VVFN+CKD ILR NL+ SGFMD Sbjct: 241 RMVEAIELFAEICNNRYFHNSSMILFLNKRDLFAEKIMVKDIKQVSHFNDFPGGLGDFELGVQYFLNLFLKVNQNPDRVIYHHVTCATDTQNVQVVFNACKDIILRGNLKDSGFMD 356
BLAST of mRNA_C-tenellus_contig11759.1.2 vs. uniprot
Match: W7U751_9STRA (G-protein complex alpha subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U751_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.390e-31 Identity = 70/117 (59.83%), Postives = 88/117 (75.21%), Query Frame = 1 Query: 298 RMGEAIELFREICLNPYFERSSIILFLNKKDLFAEKIPVKDISTVPEWSDFRGPCT--FDKGVNYFLEKFLSSNI--TSKTVYHHVTCATDSENIRVVFNSCKDTILRNNLRTSGFM 636 RM EAI+LF+EIC N +F SS++LFLNKKDLFAEKI VKDI VP++SD++G C FD GV+YF+ FL N K +Y+HVTCATD++N+ VV N+CKD I R NL+ SGFM Sbjct: 240 RMIEAIQLFKEICNNKFFANSSMLLFLNKKDLFAEKIWVKDIKGVPQFSDYKG-CLGDFDAGVDYFVNLFLGVNDRPNEKIIYNHVTCATDTKNVEVVMNACKDIITRGNLKDSGFM 355
BLAST of mRNA_C-tenellus_contig11759.1.2 vs. uniprot
Match: A0A7S2BI98_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI98_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.570e-31 Identity = 58/113 (51.33%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 298 RMGEAIELFREICLNPYFERSSIILFLNKKDLFAEKIPVKDISTVPEWSDFRGPCTFDKGVNYFLEKFLSSNITSKTVYHHVTCATDSENIRVVFNSCKDTILRNNLRTSGFM 636 RM EA++L+ E+ N YFE+SS++LFLNKKDLF EKI I P+++D+ G + G +YF+EKF N T + Y+H+TCATD+ N+++VFN+CKD IL+NNL+ SGF+ Sbjct: 74 RMKEALDLYDEVSNNRYFEKSSMLLFLNKKDLFEEKIAKVPIQDTPDFADYTGGADYKAGCDYFIEKFRQLNKTDREFYYHLTCATDTSNVKMVFNTCKDIILKNNLKDSGFL 186
BLAST of mRNA_C-tenellus_contig11759.1.2 vs. uniprot
Match: D7FP05_ECTSI (GPA1, alpha subunit of a heterotrimeric G protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP05_ECTSI) HSP 1 Score: 134 bits (338), Expect = 1.070e-30 Identity = 69/115 (60.00%), Postives = 83/115 (72.17%), Query Frame = 1 Query: 298 RMGEAIELFREICLNPYFERSSIILFLNKKDLFAEKIPVKDISTVPEWSDFRG-PCTFDKGVNYFLEKFLSSNIT-SKTVYHHVTCATDSENIRVVFNSCKDTILRNNLRTSGFM 636 RM EA++LF EIC N +F SS+ILFLNKKDLFAEKI DI +V +W+DF G P + G YFL FL N + VYHHVTCATD+EN+ VFNSCKD ILR+NL+ SGF+ Sbjct: 240 RMTEAMDLFNEICNNRFFSESSMILFLNKKDLFAEKIQRVDIKSVEKWADFTGEPRDEEAGKAYFLSLFLKVNQNPEREVYHHVTCATDTENVNFVFNSCKDVILRSNLKDSGFV 354
BLAST of mRNA_C-tenellus_contig11759.1.2 vs. uniprot
Match: A0A812ZWS0_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZWS0_SYMMI) HSP 1 Score: 129 bits (325), Expect = 1.150e-30 Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 298 RMGEAIELFREICLNPYFERSSIILFLNKKDLFAEKIPVKDISTVPEWSDFRGPC-TFDKGVNYFLEKFLSSNITSKT--VYHHVTCATDSENIRVVFNSCKDTILRNNLRTSGFMD 639 RM EA++LF EI N +F +SSIILFLNK+DLF KI IS ++D+ GP +D GV YFL+KF++ N + +YHHVTCATD++N+RVVF++CKD ILR NL+ SGFMD Sbjct: 79 RMVEALDLFDEIINNAFFRKSSIILFLNKRDLFEMKIKTTPISDTAFFADYSGPPGDYDSGVEYFLKKFMARNKSGADHQIYHHVTCATDTKNVRVVFDACKDIILRENLKNSGFMD 195
BLAST of mRNA_C-tenellus_contig11759.1.2 vs. uniprot
Match: A0A485L3B6_9STRA (Aste57867_14988 protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A485L3B6_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.180e-29 Identity = 68/115 (59.13%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 298 RMGEAIELFREICLNPYFERSSIILFLNKKDLFAEKIPVKDISTVPEWSDFRGPC-TFDKGVNYFLEKFLSSNIT-SKTVYHHVTCATDSENIRVVFNSCKDTILRNNLRTSGFM 636 RM EAI LF EI N +F S++ILFLNKKDLF EK+ DI ++ + DF G FDKGV YFL KFL N K +YHHVTCATDS+N++VVFN+CKD IL+ N+R SGFM Sbjct: 239 RMIEAITLFDEIVNNRFFSNSAMILFLNKKDLFEEKVKKIDIKSIEVFKDFPGGLGDFDKGVTYFLSKFLEMNRQPEKEIYHHVTCATDSQNVQVVFNACKDIILKQNIRGSGFM 353
BLAST of mRNA_C-tenellus_contig11759.1.2 vs. uniprot
Match: A0A7S2BLN2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BLN2_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.410e-29 Identity = 58/113 (51.33%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 298 RMGEAIELFREICLNPYFERSSIILFLNKKDLFAEKIPVKDISTVPEWSDFRGPCTFDKGVNYFLEKFLSSNITSKTVYHHVTCATDSENIRVVFNSCKDTILRNNLRTSGFM 636 RM EA++L+ E+ N YFE+SS++LFLNKKDLF EKI I P+++D+ G + G +YF+EKF N T + Y+H+TCATD+ N+++VFN+CKD IL+NNL+ SGF+ Sbjct: 235 RMKEALDLYDEVSNNRYFEKSSMLLFLNKKDLFEEKIAKVPIQDTPDFADYTGGADYKAGCDYFIEKFRQLNKTDREFYYHLTCATDTSNVKMVFNTCKDIILKNNLKDSGFL 347
BLAST of mRNA_C-tenellus_contig11759.1.2 vs. uniprot
Match: T0QTL4_SAPDV (Uncharacterized protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QTL4_SAPDV) HSP 1 Score: 130 bits (328), Expect = 2.200e-29 Identity = 69/115 (60.00%), Postives = 83/115 (72.17%), Query Frame = 1 Query: 298 RMGEAIELFREICLNPYFERSSIILFLNKKDLFAEKIPVKDISTVPEWSDFRGPC-TFDKGVNYFLEKFLSSNIT-SKTVYHHVTCATDSENIRVVFNSCKDTILRNNLRTSGFM 636 RM EAI LF EI N +F S++ILFLNKKDLF EKI DI +V + DF+G F+KGV YFL KFL N K +YHHVTCATDS+N++VVFN+CKD IL+ N+R SGFM Sbjct: 240 RMIEAITLFDEIVNNRFFGNSAMILFLNKKDLFEEKIRKIDIKSVEVFKDFQGGLGDFEKGVTYFLSKFLEMNRQPEKEIYHHVTCATDSQNVQVVFNACKDIILKQNIRGSGFM 354 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11759.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11759.1.2 >prot_C-tenellus_contig11759.1.2 ID=prot_C-tenellus_contig11759.1.2|Name=mRNA_C-tenellus_contig11759.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=150bp MHSLTDILRQLGNFIHTHAATLLSCPSTGWMVNVFRMGEAIELFREICLNback to top mRNA from alignment at C-tenellus_contig11759:621..5001- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11759.1.2 ID=mRNA_C-tenellus_contig11759.1.2|Name=mRNA_C-tenellus_contig11759.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4381bp|location=Sequence derived from alignment at C-tenellus_contig11759:621..5001- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11759:621..5001- >mRNA_C-tenellus_contig11759.1.2 ID=mRNA_C-tenellus_contig11759.1.2|Name=mRNA_C-tenellus_contig11759.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=450bp|location=Sequence derived from alignment at C-tenellus_contig11759:621..5001- (Choristocarpus tenellus KU2346)back to top |