mRNA_C-tenellus_contig1175.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1175.5.1 vs. uniprot
Match: D8LBG3_ECTSI (2-keto-3-deoxy-6-phosphogluconate aldolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBG3_ECTSI) HSP 1 Score: 144 bits (363), Expect = 1.120e-36 Identity = 87/227 (38.33%), Postives = 137/227 (60.35%), Query Frame = 3 Query: 132 SVRTISAATNFASKTSLLKSPLCGRPLQAWPSTLRPPTLIAVLRGVKLKHLMGVTRILVDEGFTMLSVTADTPRCFEIVDALAN--ISGIVPGMSSVLTTEQVEKAASHGARFISSTTFDPAVVHCTKELNLLSIPGVLNAAEATEAIAAGGDILKIFPAHKVPPSALQELVGSLPAGT-KVIIAGGLTVDRIQAYTSAGAMGFAAGSTLFKAGVSIPDLRERARAF 803 S T+ + A++ S ++ L +P + L P IAVLR V+L+ + V R L +EGF M+SVTADT +I+ ++ ++ G SSV T ++V+ A + F+SST+ DPA+V T++L ++SIPGV A+A A+ AGG ILK++PA V P+ +++V ++ V+I+GG+ D++QAY +GA GFA G TLF+ S ++ +RAR F Sbjct: 27 SSSTVHVSRCQAARLSCRETELRSKPRE---DALSLPISIAVLRDVQLERAVEVVRALYEEGFNMISVTADTKNFSKILRSIPRSFFPDLLLGASSVTTLDEVDVAFACAVNFVSSTSCDPAIVKRTRDLGMVSIPGVSTPAQAASAVQAGGGILKVYPATNVSPNQCRDIVNAIKTSNIPVVISGGVEPDQLQAYVKSGASGFAVGRTLFEPEKSSAEIADRARCF 250
BLAST of mRNA_C-tenellus_contig1175.5.1 vs. uniprot
Match: UPI001E4097A3 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=3 Tax=Shewanella TaxID=22 RepID=UPI001E4097A3) HSP 1 Score: 129 bits (324), Expect = 8.630e-32 Identity = 72/186 (38.71%), Postives = 106/186 (56.99%), Query Frame = 3 Query: 246 LIAVLRGVKLKHLMGVTRILVDEGFTMLSVTADTPRCFEIVDALANISG--IVPGMSSVLTTEQVEKAASHGARFISSTTFDPAVVHCTKELNLLSIPGVLNAAEATEAIAAGGDILKIFPAHKVPPSALQELVGSLPAGTKVIIAGGLTVDRIQAYTSAGAMGFAAGSTLFKAGVSIPDLRERAR 797 LIA+LRGV + ++ VT L++EGFTM+ V ++P E + + G + G +VLT EQ E A+ G + I S +PAV+ TKEL+++S PGV E AI AG D K FPA +PPS ++ P G ++ GG+ + Y SAGA+GF GS L+K G ++ ++R A+ Sbjct: 12 LIAILRGVTNEEVVEVTGALIEEGFTMIEVPLNSPNAVESIRRIVEAYGDKALIGAGTVLTVEQAEAVAAVGGKLIVSPNMNPAVIKRTKELDMISAPGVATPTELFAAIEAGADAAKAFPADAIPPSTIKAWTSVAPKGYPILAVGGIHAGNMADYLSAGAVGFGIGSNLYKPGKTVAEVRAVAK 197
BLAST of mRNA_C-tenellus_contig1175.5.1 vs. uniprot
Match: A0A1E8FHM2_9ALTE (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Alteromonas lipolytica TaxID=1856405 RepID=A0A1E8FHM2_9ALTE) HSP 1 Score: 125 bits (313), Expect = 3.350e-30 Identity = 70/186 (37.63%), Postives = 105/186 (56.45%), Query Frame = 3 Query: 246 LIAVLRGVKLKHLMGVTRILVDEGFTMLSVTADTPRCFEIVDALANISG--IVPGMSSVLTTEQVEKAASHGARFISSTTFDPAVVHCTKELNLLSIPGVLNAAEATEAIAAGGDILKIFPAHKVPPSALQELVGSLPAGTKVIIAGGLTVDRIQAYTSAGAMGFAAGSTLFKAGVSIPDLRERAR 797 LIA+LRGV ++ VT L++EGFTM+ V ++P E + + G + G +VLT E VE A+ G + I S + V+ TKEL+++S PGV E AI AG D K FPA +PPS ++ P G ++ GG+ D + Y +AGA+GF GS L+K+G ++ ++R A+ Sbjct: 12 LIAILRGVTNDEVVEVTAALIEEGFTMIEVPLNSPNAVESIRRIVEAFGDKALIGAGTVLTVEDVEAVAAVGGKLIVSPNMNVDVIKRTKELDMISAPGVATPTELFAAIQAGADAAKAFPADAIPPSTIKAWNSVTPKGYPILAVGGINADNMADYLAAGAVGFGIGSNLYKSGKTVDEVRSVAK 197
BLAST of mRNA_C-tenellus_contig1175.5.1 vs. uniprot
Match: UPI000F03680E (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Brevundimonas lutea TaxID=2293980 RepID=UPI000F03680E) HSP 1 Score: 124 bits (312), Expect = 4.930e-30 Identity = 76/190 (40.00%), Postives = 104/190 (54.74%), Query Frame = 3 Query: 246 LIAVLRGVKLKHLMGVTRILVDEGFTMLSVTADTPRCFEIVDALANISG--IVPGMSSVLTTEQVEKAASHGARFISSTTFDPAVVHCTKELNLLSIPGVLNAAEATEAIAAGGDILKIFPAHKVPPSALQELVGSLPAGTKVIIAGGLTVDRIQAYTSAGAMGFAAGSTLFKAGVSIPDLRERARAFYE 809 L+A+LRG+ + V LV+ GF L V ++PR E + + G V G +VLT E A G R + S D AV+ TK L L+S+PGV EA +A+AAG D LK+FPA P+ L+ L LPA T+V+ GG++ + + + AGA GF G L+KAG S + ERAR F E Sbjct: 13 LVAILRGLTPEDAASVGEALVEAGFRCLEVPLNSPRPLESISRMVEAVGDRAVVGAGTVLTVEATRAVAQAGGRLVISPGMDAAVIRETKALGLVSLPGVFTPTEAFQALAAGADGLKLFPAEIAGPAGLKALRAVLPAETRVLAVGGVSPETMGDWMQAGAAGFGIGGALYKAGDSAAVVGERARTFVE 202
BLAST of mRNA_C-tenellus_contig1175.5.1 vs. uniprot
Match: UPI001B151FE4 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Sphingobium sp. TaxID=1912891 RepID=UPI001B151FE4) HSP 1 Score: 124 bits (310), Expect = 9.570e-30 Identity = 73/199 (36.68%), Postives = 110/199 (55.28%), Query Frame = 3 Query: 210 LQAWPSTLRPPTLIAVLRGVKLKHLMGVTRILVDEGFTMLSVTADTPRCFEIVDALANIS--GIVPGMSSVLTTEQVEKAASHGARFISSTTFDPAVVHCTKELNLLSIPGVLNAAEATEAIAAGGDILKIFPAHKVPPSALQELVGSLPAGTKVIIAGGLTVDRIQAYTSAGAMGFAAGSTLFKAGVSIPDLRERARA 800 ++ W + P +A+LRG+ + V LV G + V ++PR E + ALA+ + ++ G +VL+ V+ A G R I S +P V+ TKEL LLS+PG+ +EA AI AG D LK+FPA P+ L+ + LP+ V GG+ D + A+ AGA GF GS LF+ G+++ +L ERA+A Sbjct: 1 MRHWFHHIAPMPFVAILRGLAPEDAPSVGETLVGAGLRCIEVPLNSPRPLESIAALADAAHESVLIGAGTVLSPADVDSVAQAGGRIIVSPNMNPRVIRRTKELGLLSLPGIATPSEAFAAIEAGADGLKLFPAEMHNPAVLKAMKAVLPSDIPVFAVGGIGPDNLTAWRRAGADGFGIGSALFRPGIALAELDERAKA 199
BLAST of mRNA_C-tenellus_contig1175.5.1 vs. uniprot
Match: A0A2T1HPJ1_9HYPH (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Alsobacter soli TaxID=2109933 RepID=A0A2T1HPJ1_9HYPH) HSP 1 Score: 123 bits (308), Expect = 2.230e-29 Identity = 71/188 (37.77%), Postives = 109/188 (57.98%), Query Frame = 3 Query: 246 LIAVLRGVKLKHLMGVTRILVDEGFTMLSVTADTPRCFEIVDALAN-ISG-IVPGMSSVLTTEQVEKAASHGARFISSTTFDPAVVHCTKELNLLSIPGVLNAAEATEAIAAGGDILKIFPAHKVPPSALQELVGSLPAGTKVIIAGGLTVDRIQAYTSAGAMGFAAGSTLFKAGVSIPDLRERARAF 803 LIA+LRG+K + V LV GFT+L V ++P + + LA ++G V G +V +QVE A+ G + I S +P V+ TK+L L+S PGV+ +EA +A AG D+LK FP + P+ ++ + LP G +++ GG+T + ++AY GF GS L+K G + ++ ERARAF Sbjct: 16 LIAILRGLKPDEGVAVGEALVSAGFTILEVPLNSPEPLDSIGRLAKALAGRAVVGAGTVYRPDQVEAVAAVGGQIIVSPNCNPEVIRRTKQLGLVSAPGVMTPSEAYQACEAGADVLKFFPGEVIGPAGVKAMSAVLPKGPALVMVGGITPETLKAYAETPVSGFGLGSALYKPGSTAAEVGERARAF 203
BLAST of mRNA_C-tenellus_contig1175.5.1 vs. uniprot
Match: A0A7C7YZF3_9GAMM (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7YZF3_9GAMM) HSP 1 Score: 122 bits (307), Expect = 5.190e-29 Identity = 73/191 (38.22%), Postives = 106/191 (55.50%), Query Frame = 3 Query: 246 LIAVLRGVKLKHLMGVTRILVDEGFTMLSVTADTPRCFEIVDALAN--ISGIVPGMSSVLTTEQVEKAASHGARFISSTTFDPAVVHCTKELNLLSIPGVLNAAEATEAIAAGGDILKIFPAHKVPPSALQELVGSLPAGTKVIIAGGLTVDRIQAYTSAGAMGFAAGSTLFKAGVSIPDLRERARAFYEE 812 LIA+LRGV+ +GV LV GFT++ V ++P + ++ LA + G +VLT E V S G +FI + + V KE L PGVL +EA EA+ G D+LKIFPA V P+ + L LP + + GG+T ++ Y +AG+ GF GS+L+KAG+S +++ERA F E Sbjct: 37 LIAILRGVRPDEAVGVADALVAAGFTLVEVPLNSPEPLKSIEILAKHLADDCIVGAGTVLTVEDVNSVTSAGGQFIVAPNLNRKVGDAAKENGLTWCPGVLTPSEAFEAVDQGADLLKIFPAELVSPAGVAALRAVLPPRVLIAVVGGITPQGMEDYVAAGSNGFGLGSSLYKAGMSPSEVKERATRFTRE 227
BLAST of mRNA_C-tenellus_contig1175.5.1 vs. uniprot
Match: UPI000A9856B1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Betaproteobacteria bacterium AqS2 TaxID=1732024 RepID=UPI000A9856B1) HSP 1 Score: 121 bits (303), Expect = 8.290e-29 Identity = 70/188 (37.23%), Postives = 102/188 (54.26%), Query Frame = 3 Query: 246 LIAVLRGVKLKHLMGVTRILVDEGFTMLSVTADTPRCFEIVDALANISGI--VPGMSSVLTTEQVEKAASHGARFISSTTFDPAVVHCTKELNLLSIPGVLNAAEATEAIAAGGDILKIFPAHKVPPSALQELVGSLPAGTKVIIAGGLTVDRIQAYTSAGAMGFAAGSTLFKAGVSIPDLRERARAF 803 LIA+LRG+ + V + LV G +++ VT ++P + ++ LA G + G +VL +VE+ A G R + S FDPAVV TKE L S+PG L E A+AAG D+LK+FP P ++ LP K+ + GG+ D + AY AGA F GS L+K G + ++ E A+ F Sbjct: 9 LIAILRGIAPDEAVAVGKELVAAGVSIMEVTMNSPEPLKSIELLAEACGADALVGAGTVLAPAEVEQVARAGGRLVVSPNFDPAVVKATKEQGLASVPGCLTPTEMFAALAAGADMLKVFPGDVATPPVIKGYRAVLPKEAKIAVTGGVNADNLAAYRQAGADCFGIGSALYKPGKTAAEVGESAKEF 196
BLAST of mRNA_C-tenellus_contig1175.5.1 vs. uniprot
Match: A0A850PIJ1_9PROT (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Ameyamaea chiangmaiensis TaxID=442969 RepID=A0A850PIJ1_9PROT) HSP 1 Score: 121 bits (303), Expect = 1.080e-28 Identity = 69/185 (37.30%), Postives = 103/185 (55.68%), Query Frame = 3 Query: 246 LIAVLRGVKLKHLMGVTRILVDEGFTMLSVTADTPRCFEIVDALANISG--IVPGMSSVLTTEQVEKAASHGARFISSTTFDPAVVHCTKELNLLSIPGVLNAAEATEAIAAGGDILKIFPAHKVPPSALQELVGSLPAGTKVIIAGGLTVDRIQAYTSAGAMGFAAGSTLFKAGVSIPDLRERA 794 LIA+LRGV+ + + +L+ GF ++ V ++P F+ + L G ++ G +VL+TE V A G R I DPAV+ K ++ PGV E A+AAG D LK+FPA ++ P+ L+ PAGT + GG+T D ++ + AGA GF GS L++ G+S+P L ERA Sbjct: 14 LIAILRGVRPAEAVAMGEVLLHAGFRIVEVPLNSPEPFDSIRRLHKAFGDRLLIGAGTVLSTEAVANVAEAGGRIIVMPHGDPAVIRAAKAAGMVCTPGVATPTEGFAALAAGADALKLFPAEQLGPTVLKAWRSVFPAGTSFVPVGGITPDNMRPWLDAGAAGFGLGSGLYRKGMSVPALAERA 198
BLAST of mRNA_C-tenellus_contig1175.5.1 vs. uniprot
Match: A0A370XCI8_9GAMM (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Dyella psychrodurans TaxID=1927960 RepID=A0A370XCI8_9GAMM) HSP 1 Score: 121 bits (303), Expect = 1.140e-28 Identity = 73/200 (36.50%), Postives = 108/200 (54.00%), Query Frame = 3 Query: 210 LQAWPSTLRPPTLIAVLRGVKLKHLMGVTRILVDEGFTMLSVTADTPRCFEIVDALANISG--IVPGMSSVLTTEQVEKAASHGARFISSTTFDPAVVHCTKELNLLSIPGVLNAAEATEAIAAGGDILKIFPAHKVPPSALQELVGSLPAGTKVIIAGGLTVDRIQAYTSAGAMGFAAGSTLFKAGVSIPDLRERARAF 803 L+ W L P L+A+LRG++ + V L GF +L V ++P+ E + LA G + G +V+T QV A+ G R I D +V+H K+ L+ +PGV EA A+AAG D LK+FPA +V P L+ LP G V+ GG+T++ + + SAGA GF GS L+ G+ ++ RA+AF Sbjct: 2 LKPW---LEPLPLVAILRGIQPDEAVAVGAALASSGFRVLEVPLNSPQPLESIRRLAQSLGDTCLVGAGTVMTPAQVSDVAAAGGRLIVMPHADVSVIHAAKDAGLVCVPGVATPTEAFAALAAGADGLKLFPAEQVQPEGLKAWRAVLPNGLPVLPVGGITLESMARWISAGAQGFGIGSALYAPGLDAVEVARRAQAF 198 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1175.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1175.5.1 >prot_C-tenellus_contig1175.5.1 ID=prot_C-tenellus_contig1175.5.1|Name=mRNA_C-tenellus_contig1175.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=190bp MGVTRILVDEGFTMLSVTADTPRCFEIVDALANISGIVPGMSSVLTTEQVback to top mRNA from alignment at C-tenellus_contig1175:11262..12809+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1175.5.1 ID=mRNA_C-tenellus_contig1175.5.1|Name=mRNA_C-tenellus_contig1175.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1548bp|location=Sequence derived from alignment at C-tenellus_contig1175:11262..12809+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1175:11262..12809+ >mRNA_C-tenellus_contig1175.5.1 ID=mRNA_C-tenellus_contig1175.5.1|Name=mRNA_C-tenellus_contig1175.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=570bp|location=Sequence derived from alignment at C-tenellus_contig1175:11262..12809+ (Choristocarpus tenellus KU2346)back to top |