mRNA_C-tenellus_contig11743.3.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig11743.3.1
Unique NamemRNA_C-tenellus_contig11743.3.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig11743.3.1 vs. uniprot
Match: D7G0Q1_ECTSI (Aldo-keto reductase family 7, member A2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q1_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 2.150e-33
Identity = 68/91 (74.73%), Postives = 75/91 (82.42%), Query Frame = 3
Query:  633 MSIPNPLDAISTKATLDEFREAGHQEIDTAIMYQGGKAEATLGELGVASSFRVAVKANPWYKDGKTYDVPVGGLNGASVKEQLRSSLSSLR 905
            MSIP PLDA +T+  LD F   G  +IDTAIMYQGGK+EATLGE G+  SFRVA KANPWYKDGKT+D PVGGLN ASVKEQLR+SLSSLR
Sbjct:    1 MSIPAPLDAEATREALDYFAARGFDQIDTAIMYQGGKSEATLGEAGM-ESFRVAAKANPWYKDGKTFDDPVGGLNAASVKEQLRASLSSLR 90          
BLAST of mRNA_C-tenellus_contig11743.3.1 vs. uniprot
Match: A0A7R7IJ70_SACJA (4-deoxy-L-erythro-5-hexoseulose uronate reductase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A7R7IJ70_SACJA)

HSP 1 Score: 133 bits (335), Expect = 1.480e-32
Identity = 66/99 (66.67%), Postives = 79/99 (79.80%), Query Frame = 3
Query:  609 KVATVLGTMSIPNPLDAISTKATLDEFREAGHQEIDTAIMYQGGKAEATLGELGVASSFRVAVKANPWYKDGKTYDVPVGGLNGASVKEQLRSSLSSLR 905
            +VAT+LGTMSIP PLD  +T+  L  F  AG +EIDTAIMYQGGK+E TLG++G+  +FRVA KANPWYKDGKT++ PVGGL   SVKEQLR+SL  LR
Sbjct:   21 RVATILGTMSIPTPLDEGATRQALQYFSAAGFEEIDTAIMYQGGKSETTLGDVGM-ETFRVACKANPWYKDGKTFNDPVGGLRADSVKEQLRASLQGLR 118          
BLAST of mRNA_C-tenellus_contig11743.3.1 vs. uniprot
Match: A0A835YS59_9STRA (Aldo-keto reductase family 7, member A2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS59_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.770e-25
Identity = 52/91 (57.14%), Postives = 66/91 (72.53%), Query Frame = 3
Query:  633 MSIPNPLDAISTKATLDEFREAGHQEIDTAIMYQGGKAEATLGELGVASSFRVAVKANPWYKDGKTYDVPVGGLNGASVKEQLRSSLSSLR 905
            M IP+P+        L  F+ AGH ++DTAIMYQGG+ E TLGEL V SS +VA+KANPWY+DGKT+D PV GL  A +KEQ+R+SL  L+
Sbjct:    1 MGIPSPMTKELASEALQIFKAAGHSDLDTAIMYQGGQTEVTLGELQVGSSVKVAIKANPWYRDGKTFDDPVAGLEPAQLKEQVRTSLKHLK 91          
BLAST of mRNA_C-tenellus_contig11743.3.1 vs. uniprot
Match: D7FYC6_ECTSI (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYC6_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 7.760e-23
Identity = 57/103 (55.34%), Postives = 67/103 (65.05%), Query Frame = 3
Query:  600 KSNKVATVLGTMSIPNPLDAISTKATLDEFREAGHQEIDTAIMYQGGKAEATLGELGVASSFRVAVKANPWYKDGKTYD--VPVGGLNGASVKEQLRSSLSSL 902
            KS  +  VLGTMSIP PLD  + +  L+ F  AG  EIDTAI+YQGG  E TLGE+GV   FRVA KANPWYK  +++D   P  GL    VKEQLR S+  L
Sbjct:   23 KSASIPAVLGTMSIPEPLDTAAAREALEYFHAAGFDEIDTAILYQGGATETTLGEIGV-EKFRVAAKANPWYKTDESHDFFTPTYGLRPDLVKEQLRKSIEVL 124          
BLAST of mRNA_C-tenellus_contig11743.3.1 vs. uniprot
Match: A0A6B2LA93_9EUKA (Aldo_ket_red domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LA93_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 4.860e-15
Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 3
Query:  624 LGTMSIPNPLDAISTKATLDEFREAGHQEIDTAIMYQGGKAEATLGELGVASSFRVAVKANPWY--KDGKTYDVPVGGLNGASVKEQLRSSLSSL 902
            +GTM +  PLD   T+  LD F+   HQEIDTA++YQGGK E  LGE G+     VA K NPW+    G + D P  GL   +V++Q++ SL++L
Sbjct:    1 MGTMGVGGPLDVQKTRIVLDMFKAHQHQEIDTAVLYQGGKTERVLGEAGLGG-LTVATKVNPWFDVNRGVSTDSPCKGLAPEAVRKQIQKSLAAL 94          
BLAST of mRNA_C-tenellus_contig11743.3.1 vs. uniprot
Match: A0A3B3SYQ0_9TELE (Aldo-keto reductase family 7 member A3 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SYQ0_9TELE)

HSP 1 Score: 85.1 bits (209), Expect = 9.070e-15
Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  537 NPIFCNVIFPSLASSASSTLLKSNKVATVLGTMSIPNPLDAISTKATLDEFREAGHQEIDTAIMYQGGKAEATLGELGVASSFRVAVKANPWYKDGKTYDVPVGGLNGASVKEQLRSSLSSLRCAC 914
            N  F  V+  +++SS S+    + +  T+LGTM+     DA ++   +  + E GH ++DTA+MY GGK+EA +GE+G+  + R+A KANPW  +GKT       L   SV+ QL +SL  LR  C
Sbjct:   15 NSSFIRVLRRNMSSSQST---HTGRPVTLLGTMAFGGRADADTSARMVRAYLERGHADLDTALMYTGGKSEAIIGEIGLPKTVRIATKANPW--EGKT-------LKAESVRSQLDTSLQRLRTQC 128          
BLAST of mRNA_C-tenellus_contig11743.3.1 vs. uniprot
Match: A0A6H5JF57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF57_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 8.460e-13
Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 3
Query:  603 SNKVATVLGTMSIPNPLDAISTKATLDEFREAGHQEIDTAIMYQGGKAEATLGEL 767
            S +VATVLGTMSIP PLDA +T+  LD F   G  +IDTAIMYQGGK+EATLG L
Sbjct:   65 STRVATVLGTMSIPAPLDAEATREALDYFAARGFDQIDTAIMYQGGKSEATLGVL 119          
BLAST of mRNA_C-tenellus_contig11743.3.1 vs. uniprot
Match: A0A672RQ53_SINGR (Aflatoxin B1 aldehyde reductase member 2-like n=2 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672RQ53_SINGR)

HSP 1 Score: 77.4 bits (189), Expect = 2.290e-12
Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = 3
Query:  618 TVLGTMSIPNPLDAISTKATLDEFREAGHQEIDTAIMYQGGKAEATLGELGVASSFRVAVKANPWYKDGKTYDVPVGGLNGASVKEQLRSSLSSLRCAC 914
            T+LG+M+     DA  +   +  F E GH E+DTA+MY  G+AE  +G + +  + R+A KANPW  +GKT       LN  SV++QL +SL  LR  C
Sbjct:   39 TLLGSMAFGGRADAHLSSRLVQVFLERGHNELDTALMYNDGQAETIIGNMQLPKTVRIATKANPW--EGKT-------LNPESVRDQLETSLKRLRTQC 128          
BLAST of mRNA_C-tenellus_contig11743.3.1 vs. uniprot
Match: A0A6F9D6P7_9ASCI (Aflatoxin B1 aldehyde reductase member 2-like n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9D6P7_9ASCI)

HSP 1 Score: 75.9 bits (185), Expect = 1.440e-11
Identity = 50/135 (37.04%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  510 ALTRH-NALSNPIFCNVIFPSLASSASSTLLKSNKVATVLGTMSIPNPLDAISTKATLDEFREAGHQEIDTAIMYQGGKAEATLGELGVASS--FRVAVKANPWYKDGKTYDVPVGGLNGASVKEQLRSSLSSLR 905
            +L+ H NA S+  FC+V      S       ++  + T+LGTM +   LD   +   ++EF+++G+ EIDTA MY GGK E  +G+  V  +   ++A KANPW  DGK       GL+  SV+ QL +SL  L+
Sbjct:   68 SLSAHCNASSSGSFCSVQRILKKSFVIDIKRQNLTMKTILGTMEMGRRLDLNDSGVMMNEFKDSGNVEIDTAFMYAGGKTEEFMGKCEVTQNKKIKIATKANPW--DGK-------GLSAKSVRNQLETSLERLK 193          
BLAST of mRNA_C-tenellus_contig11743.3.1 vs. uniprot
Match: A0A553QP98_9TELE (Uncharacterized protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553QP98_9TELE)

HSP 1 Score: 74.3 bits (181), Expect = 2.650e-11
Identity = 43/129 (33.33%), Postives = 70/129 (54.26%), Query Frame = 3
Query:  528 ALSNPIFCNVIFPSLASSASSTLLKSNKVATVLGTMSIPNPLDAISTKATLDEFREAGHQEIDTAIMYQGGKAEATLGELGVASSFRVAVKANPWYKDGKTYDVPVGGLNGASVKEQLRSSLSSLRCAC 914
            AL + +F  +         + + ++S    T+LG+M+     DA  +   + EF   GH E+DTA+MY  G+AE+ +G++ +  + ++A KANPW  +GKT       L+  SV+ QL +SL  LR  C
Sbjct:    4 ALHHRLFSRLKIAVFTQIRNMSQMQSRLPVTLLGSMAFGGRADAQVSAQLVHEFLNRGHNELDTALMYNDGRAESIIGDIQLPETVKIATKANPW--EGKT-------LHAESVRAQLEASLIRLRRHC 123          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11743.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7G0Q1_ECTSI2.150e-3374.73Aldo-keto reductase family 7, member A2 n=1 Tax=Ec... [more]
A0A7R7IJ70_SACJA1.480e-3266.674-deoxy-L-erythro-5-hexoseulose uronate reductase ... [more]
A0A835YS59_9STRA2.770e-2557.14Aldo-keto reductase family 7, member A2 n=1 Tax=Tr... [more]
D7FYC6_ECTSI7.760e-2355.34Aldo_ket_red domain-containing protein n=2 Tax=Ect... [more]
A0A6B2LA93_9EUKA4.860e-1545.26Aldo_ket_red domain-containing protein n=1 Tax=Arc... [more]
A0A3B3SYQ0_9TELE9.070e-1538.89Aldo-keto reductase family 7 member A3 n=2 Tax=Par... [more]
A0A6H5JF57_9PHAE8.460e-1369.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A672RQ53_SINGR2.290e-1241.41Aflatoxin B1 aldehyde reductase member 2-like n=2 ... [more]
A0A6F9D6P7_9ASCI1.440e-1137.04Aflatoxin B1 aldehyde reductase member 2-like n=1 ... [more]
A0A553QP98_9TELE2.650e-1133.33Uncharacterized protein n=1 Tax=Danionella translu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11743contigC-tenellus_contig11743:3120..5044 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G0Q1
Preferred nameAKR7A2
PFAMsAldo_ket_red
Model size1039
Max annot lvl2759|Eukaryota
KEGG rclassRC00099
KEGG koko:K15303
KEGG ReactionR09412,R09413,R09414,R09415
KEGG Pathwayko00980,map00980
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004032,GO:0004033,GO:0004301,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0005975,GO:0006066,GO:0006081,GO:0006091,GO:0006725,GO:0006805,GO:0006807,GO:0008106,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009987,GO:0012505,GO:0016137,GO:0016491,GO:0016614,GO:0016616,GO:0016787,GO:0016801,GO:0016803,GO:0016999,GO:0017144,GO:0019118,GO:0019119,GO:0019748,GO:0022900,GO:0030638,GO:0030647,GO:0034308,GO:0042180,GO:0042221,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043385,GO:0043387,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044597,GO:0044598,GO:0046222,GO:0046223,GO:0046483,GO:0046700,GO:0050896,GO:0051186,GO:0051716,GO:0055114,GO:0070887,GO:0071466,GO:0071704,GO:0097164,GO:0098754,GO:1901135,GO:1901360,GO:1901361,GO:1901376,GO:1901377,GO:1901575,GO:1901615,GO:1901657,GO:1901661,GO:1902644
Exons2
Evalue1.11e-36
EggNOG OGsCOG0667@1|root,2QU2T@2759|Eukaryota
Ec32 ortholog descriptionNADP-dependent oxidoreductase domain
Ec32 orthologEc-09_001320.1
Descriptionphenanthrene-epoxide hydrolase activity
Cds size294
COG categoryC
BRITEko00000,ko00001
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789192.5099719-UTR-C-tenellus_contig11743:3119..37511680789192.5099719-UTR-C-tenellus_contig11743:3119..3751Choristocarpus tenellus KU2346UTRC-tenellus_contig11743 3120..3751 +
1680789192.5462372-UTR-C-tenellus_contig11743:4931..50441680789192.5462372-UTR-C-tenellus_contig11743:4931..5044Choristocarpus tenellus KU2346UTRC-tenellus_contig11743 4932..5044 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789192.5229838-CDS-C-tenellus_contig11743:3751..38781680789192.5229838-CDS-C-tenellus_contig11743:3751..3878Choristocarpus tenellus KU2346CDSC-tenellus_contig11743 3752..3878 +
1680789192.5355465-CDS-C-tenellus_contig11743:4764..49311680789192.5355465-CDS-C-tenellus_contig11743:4764..4931Choristocarpus tenellus KU2346CDSC-tenellus_contig11743 4765..4931 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11743.3.1prot_C-tenellus_contig11743.3.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig11743 3752..4931 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig11743.3.1

>prot_C-tenellus_contig11743.3.1 ID=prot_C-tenellus_contig11743.3.1|Name=mRNA_C-tenellus_contig11743.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=98bp
MSIPNPLDAISTKATLDEFREAGHQEIDTAIMYQGGKAEATLGELGVASS
FRVAVKANPWYKDGKTYDVPVGGLNGASVKEQLRSSLSSLRCACSSA*
back to top

mRNA from alignment at C-tenellus_contig11743:3120..5044+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig11743.3.1 ID=mRNA_C-tenellus_contig11743.3.1|Name=mRNA_C-tenellus_contig11743.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1925bp|location=Sequence derived from alignment at C-tenellus_contig11743:3120..5044+ (Choristocarpus tenellus KU2346)
TGGAAGAGGATTGAGATTCCATGTTTGGTAGACTTGGCGGAAGGTTGGCT CTCTTGGCCTCCCTTCTACTTGTGGAGAAGCAAGGTTTGCTCAAGCATAT CAATCCAAACCCCACCTAACCTACAAGTGCATACTTCGTTTCACGACTGG AGATAGATATCGGACACAAACTACACACCCAGAAAATCACAACTACACGT TTTCAGTTATTCCTTTATCTCGGATAGATGCGGTTGTTGAGGGAAGGGTT GAATTGCAACCCTTCAACAGAGGTGTAGGGGTCCAATGCAGCGATCTTAC CCTTCAAATCTCACTATTTTGCCTTGCTCCCTGTGGTTTGTGATATGATT TCTTCTCCGATCAATTCCACAAGTTTCATCCCTTCAGATGGCTGGCGCTG GTGGTGCTAAACGTTTCGCCTCAGAGATGGGTGAGTCATATCCATGTCTT GGGGAGAGAGGTCTCCATCCCACTCTCTTTTGTTTGCCCCCTTGATTTGA ATCTACTAGGCACTCACACGCCATAATGCGCTGTCCAACCCAATCTTTTG CAACGTAATTTTTCCCTCCCTAGCTTCGTCGGCATCCTCCACTCTGTTGA AATCAAACAAGGTGGCAACTGTTCTAGGCACCATGTCTATCCCCAACCCC TTGGATGCAATCAGCACGAAGGCAACCTTGGATGAGTTCCGCGAGGCAGG ACACCAGGAGATTGACACTGCAATTATGTATCAGGGAGGAAAGGCGGAAG CCACACTTGGTGAGAGTCTTTGACCGCACCAAAGTGGGCGTCCTGTTTGA GATGCCCAAGTCTCTGTGGCGGCTTGTTCACAGAAGGATGGATTGAGAAT TTCGATGGAGTGTGAATGTTTAAGGAACTGATGTTCCCAAGACTTACGTA TGTAAATGAATCGATTAGTTCCTTACTATGTAGAACAGGTTGTACATAAA GTAAGGAAGGTGAAAGGAAGAAGTGAACATCCAAGCTCAAAAGAGGGGGT TCTCGTCACCTTATCATTCATATTCTAATAACACGTCACTCATTCTGTGT CACTTGCTACAACCTTCTCTTTCTAGGAATCTTCTTGTTGTACTATAATA ATCCGGATAATGTTCTCACCGTCACTCAACAGAAATCTTCGTATCAGTTA TTCCATGATCGAACCATTGCCCAATAGAATTTTCATTTTCACATAAATAT AAAGCATATCTTACACTCAGGGTTTCGTTTTTGTTGGGGGTGAATGAATT ATTTAACTCTGCAGTCCTTTTGATGATTTTGAAGACTACAATTAGACGAA AAGGTGGGTTGTTTATGATGCATCGACTAAGATCTTTGATTATCTGAAGT GAGCAGCATTGCTCTTGTGTAGGATCTTCCTCATCAGAAAGAGACCTGCA CCGTACTTCAGTGGAATGGGGTTGTAACATTTCAGAATGGTGTGACAACC CAAGTGAAGGGTCCCTCACTTACTAGATGTGTGAGGCATACATACAGGGT CAAAAACATTATAGTCGGCCCTCAGGCCTAAGATAAGTCATGTGCAGAAC GGTCATTTTTTCGGACAGTGCTCAGTGCTTACATAGTCTGTTTGACGTAT CTGCTCAATGCCTGGCACGACGACCCTTGGAACAATTATTGGCAGGCGAG CTTGGTGTCGCCTCATCTTTCCGAGTGGCGGTAAAGGCCAACCCTTGGTA CAAGGATGGGAAAACGTACGATGTCCCTGTCGGGGGGCTGAATGGGGCTT CCGTGAAGGAGCAACTGCGATCTTCACTAAGCAGTCTCCGGTGTGCTTGC TCTTCCGCCTGACAGCAGTAACCCCCTCAGGCTTGAGTTGCTTGTTGGAA ATCGTTAAACTCTGCGATACACGTCGTCGCGTTTGAGTAAACTCAAGCTG GCATCGTGTCTTGCGCCATGGGATT
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig11743:3120..5044+

>mRNA_C-tenellus_contig11743.3.1 ID=mRNA_C-tenellus_contig11743.3.1|Name=mRNA_C-tenellus_contig11743.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=294bp|location=Sequence derived from alignment at C-tenellus_contig11743:3120..5044+ (Choristocarpus tenellus KU2346)
ATGTCTATCCCCAACCCCTTGGATGCAATCAGCACGAAGGCAACCTTGGA
TGAGTTCCGCGAGGCAGGACACCAGGAGATTGACACTGCAATTATGTATC
AGGGAGGAAAGGCGGAAGCCACACTTGGCGAGCTTGGTGTCGCCTCATCT
TTCCGAGTGGCGGTAAAGGCCAACCCTTGGTACAAGGATGGGAAAACGTA
CGATGTCCCTGTCGGGGGGCTGAATGGGGCTTCCGTGAAGGAGCAACTGC
GATCTTCACTAAGCAGTCTCCGGTGTGCTTGCTCTTCCGCCTGA
back to top