mRNA_C-tenellus_contig1174.8.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1174.8.1 vs. uniprot
Match: D7FQK3_ECTSI (Argonaute 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQK3_ECTSI) HSP 1 Score: 108 bits (269), Expect = 7.070e-26 Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = 1 Query: 1 KSSQNAYDCITALDISLRHAPSMTHTCVGRSFFTPEDPQRISGGAEVWLGYYQSLRATQ 177 ++SQNAYDCITALDISLRHAPSM TCVGRSFFTP+ P ISGGAEVWLGYYQSLRATQ Sbjct: 246 QTSQNAYDCITALDISLRHAPSMKLTCVGRSFFTPDMPSPISGGAEVWLGYYQSLRATQ 304
BLAST of mRNA_C-tenellus_contig1174.8.1 vs. uniprot
Match: A0A2S1PRW8_FUCSE (Putative argonaute n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRW8_FUCSE) HSP 1 Score: 105 bits (262), Expect = 6.250e-25 Identity = 49/56 (87.50%), Postives = 51/56 (91.07%), Query Frame = 1 Query: 10 QNAYDCITALDISLRHAPSMTHTCVGRSFFTPEDPQRISGGAEVWLGYYQSLRATQ 177 QNAYDCITALDISLRHAPSM TCVGRSF++PE P ISGGAEVWLGYYQSLRATQ Sbjct: 258 QNAYDCITALDISLRHAPSMALTCVGRSFYSPEMPSPISGGAEVWLGYYQSLRATQ 313
BLAST of mRNA_C-tenellus_contig1174.8.1 vs. uniprot
Match: A0A397TJF0_9GLOM (Piwi domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TJF0_9GLOM) HSP 1 Score: 74.3 bits (181), Expect = 5.690e-14 Identity = 34/55 (61.82%), Postives = 38/55 (69.09%), Query Frame = 1 Query: 13 NAYDCITALDISLRHAPSMTHTCVGRSFFTPEDPQRISGGAEVWLGYYQSLRATQ 177 N I ALD+ + H PSM VGRSFFTP+D Q +SGGAEVW GYYQS R TQ Sbjct: 129 NCLTAIMALDVLIHHEPSMKFVTVGRSFFTPQDSQVLSGGAEVWQGYYQSARPTQ 183
BLAST of mRNA_C-tenellus_contig1174.8.1 vs. uniprot
Match: A0A2Z6R9W9_9GLOM (Piwi domain-containing protein n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6R9W9_9GLOM) HSP 1 Score: 72.0 bits (175), Expect = 3.700e-13 Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 1 Query: 13 NAYDCITALDISLRHAPSMTHTCVGRSFFTPEDPQRISGGAEVWLGYYQSLRATQ 177 N ITA+D+ +RH PSM H VGRSF+TP++ Q I GGA VW GYYQS R T+ Sbjct: 151 NCLMAITAMDVIIRHKPSMEHVSVGRSFYTPKNAQSIFGGAVVWQGYYQSARPTR 205
BLAST of mRNA_C-tenellus_contig1174.8.1 vs. uniprot
Match: A0A015JUG7_RHIIW (Uncharacterized protein n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A015JUG7_RHIIW) HSP 1 Score: 72.0 bits (175), Expect = 3.700e-13 Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 1 Query: 13 NAYDCITALDISLRHAPSMTHTCVGRSFFTPEDPQRISGGAEVWLGYYQSLRATQ 177 N I ALD+ + H PSM + VG SFFTP D + ISGGAE+W GYYQS R TQ Sbjct: 150 NCLTAIMALDVIIHHQPSMDYVTVGHSFFTPRDSRPISGGAEIWQGYYQSARPTQ 204
BLAST of mRNA_C-tenellus_contig1174.8.1 vs. uniprot
Match: A0A2P4P2X8_RHIID (Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=A0A2P4P2X8_RHIID) HSP 1 Score: 72.0 bits (175), Expect = 3.740e-13 Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 1 Query: 13 NAYDCITALDISLRHAPSMTHTCVGRSFFTPEDPQRISGGAEVWLGYYQSLRATQ 177 N I ALD+ + H PSM + VG SFFTP D + ISGGAE+W GYYQS R TQ Sbjct: 147 NCLTAIMALDVIIHHQPSMDYVTVGHSFFTPRDSRPISGGAEIWQGYYQSARPTQ 201
BLAST of mRNA_C-tenellus_contig1174.8.1 vs. uniprot
Match: A0A2Z6QYC2_9GLOM (Piwi domain-containing protein n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QYC2_9GLOM) HSP 1 Score: 71.6 bits (174), Expect = 5.060e-13 Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 1 Query: 13 NAYDCITALDISLRHAPSMTHTCVGRSFFTPEDPQRISGGAEVWLGYYQSLRAT 174 N I A+D+ +RH PS+ HT VGRSF+TP+D ++GGAE W GYYQS R T Sbjct: 149 NCQMAIMAMDVIIRHRPSIVHTTVGRSFYTPQDASPLTGGAEAWQGYYQSARPT 202
BLAST of mRNA_C-tenellus_contig1174.8.1 vs. uniprot
Match: A0A507BYG2_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BYG2_9FUNG) HSP 1 Score: 71.6 bits (174), Expect = 5.060e-13 Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 1 Query: 22 DCITALDISLRHAPSMTHTCVGRSFFTPEDPQRISGGAEVWLGYYQSLRATQ--VWI 186 +C+ ALD+ +RH PS+T+T VGRSFFTPE Q I+ GAE+W G++QS+R ++ +W+ Sbjct: 162 ECLLALDVIVRHGPSITYTTVGRSFFTPEGKQFIANGAELWQGFHQSIRPSRGRLWL 218
BLAST of mRNA_C-tenellus_contig1174.8.1 vs. uniprot
Match: A0A397STW8_9GLOM (Piwi domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397STW8_9GLOM) HSP 1 Score: 71.2 bits (173), Expect = 6.910e-13 Identity = 32/50 (64.00%), Postives = 38/50 (76.00%), Query Frame = 1 Query: 28 ITALDISLRHAPSMTHTCVGRSFFTPEDPQRISGGAEVWLGYYQSLRATQ 177 I ALDI +RH PS+T+T VGRSFFTP Q + GG+EVW GYYQS R T+ Sbjct: 153 IMALDILIRHGPSITYTTVGRSFFTPRGSQPLFGGSEVWQGYYQSARPTK 202
BLAST of mRNA_C-tenellus_contig1174.8.1 vs. uniprot
Match: A0A1D1YV71_9ARAE (Protein argonaute 1 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YV71_9ARAE) HSP 1 Score: 71.2 bits (173), Expect = 6.910e-13 Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 1 Query: 22 DCIT---ALDISLRHAPSMTHTCVGRSFFTPEDPQRISGGAEVWLGYYQSLRAT 174 DC+T ALD+ +RH PSM HT VGRSF+TP+ + + GG EVW GYYQS R T Sbjct: 151 DCLTGIMALDVLIRHKPSMEHTTVGRSFYTPQGSKPLFGGVEVWQGYYQSARPT 204 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1174.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1174.8.1 >prot_C-tenellus_contig1174.8.1 ID=prot_C-tenellus_contig1174.8.1|Name=mRNA_C-tenellus_contig1174.8.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=66bp KSSQNAYDCITALDISLRHAPSMTHTCVGRSFFTPEDPQRISGGAEVWLGback to top mRNA from alignment at C-tenellus_contig1174:14007..14204+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1174.8.1 ID=mRNA_C-tenellus_contig1174.8.1|Name=mRNA_C-tenellus_contig1174.8.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=198bp|location=Sequence derived from alignment at C-tenellus_contig1174:14007..14204+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1174:14007..14204+ >mRNA_C-tenellus_contig1174.8.1 ID=mRNA_C-tenellus_contig1174.8.1|Name=mRNA_C-tenellus_contig1174.8.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=198bp|location=Sequence derived from alignment at C-tenellus_contig1174:14007..14204+ (Choristocarpus tenellus KU2346)back to top |