mRNA_C-tenellus_contig11722.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig11722.1.1
Unique NamemRNA_C-tenellus_contig11722.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig11722.1.1 vs. uniprot
Match: A0A8J6CC85_DIALT (Fe2OG dioxygenase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CC85_DIALT)

HSP 1 Score: 58.5 bits (140), Expect = 2.000e-5
Identity = 56/210 (26.67%), Postives = 81/210 (38.57%), Query Frame = 1 
Query:  118 KKGEIAAVSVPLFVHQTLAN---RKQILTCANCHRFIGTPVTQLAMLEGALSNRGQSSGSRGNDESEGRTRGLTKGKFRSLRTDIATADPHNLPGLPDLKMGAKKPG------KGNYLGSNLKDKTDSTNGPCRCVEVGRCDDIYCCDGCRRQAIAAGHNLICMAHEAEGSPLFEFHKYALSTSETYLIAASAVAAAISLPEKTRPFEAL 720
            +KGE+ A  +P    QTL++   R+  + CA C   +G    QL                           G+  G++R        A P     LP L   A+ P        G  LG  L                 RC  +YC   C  +A A GH L+C        PL EF ++A  ++ET+LI A  +AAA++   ++ P E L
Sbjct:   97 RKGEVIADELPALCTQTLSDVDAREGAVVCARCGTHLGDAAEQL---------------------------GVQLGQWRCAPA-TGEAAPRPPEALPPLDANARAPAGEAAAPAGGSLGCRL-----------------RCGAVYCGAACEAEAWALGHALLCTGGLGPAHPLCEFRRHARRSTETFLIGAHVLAAALAA--RSPPLELL 259
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11722.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8J6CC85_DIALT2.000e-526.67Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11722contigC-tenellus_contig11722:228..4432 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog38833.XP_003055541.1
PFAMs2OG-FeII_Oxy_3,SET
Model size1331
Max annot lvl2759|Eukaryota
KEGG koko:K11426,ko:K17985
KEGG Pathwayko04137,ko04140,map04137,map04140
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.73e-10
EggNOG OGsCOG2940@1|root,KOG1971@1|root,KOG1971@2759|Eukaryota,KOG2084@2759|Eukaryota
Descriptionmethyltransferase activity
Cds size1329
COG categoryE
BRITEko00000,ko00001,ko03029,ko03036,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11722.1.1prot_C-tenellus_contig11722.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig11722 228..4432 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789191.732289-CDS-C-tenellus_contig11722:227..5071680789191.732289-CDS-C-tenellus_contig11722:227..507Choristocarpus tenellus KU2346CDSC-tenellus_contig11722 228..507 -
1680789191.746539-CDS-C-tenellus_contig11722:1576..17401680789191.746539-CDS-C-tenellus_contig11722:1576..1740Choristocarpus tenellus KU2346CDSC-tenellus_contig11722 1577..1740 -
1680789191.7595174-CDS-C-tenellus_contig11722:2064..23471680789191.7595174-CDS-C-tenellus_contig11722:2064..2347Choristocarpus tenellus KU2346CDSC-tenellus_contig11722 2065..2347 -
1680789191.7707021-CDS-C-tenellus_contig11722:3406..38221680789191.7707021-CDS-C-tenellus_contig11722:3406..3822Choristocarpus tenellus KU2346CDSC-tenellus_contig11722 3407..3822 -
1680789191.7790408-CDS-C-tenellus_contig11722:4112..42021680789191.7790408-CDS-C-tenellus_contig11722:4112..4202Choristocarpus tenellus KU2346CDSC-tenellus_contig11722 4113..4202 -
1680789191.7893474-CDS-C-tenellus_contig11722:4336..44321680789191.7893474-CDS-C-tenellus_contig11722:4336..4432Choristocarpus tenellus KU2346CDSC-tenellus_contig11722 4337..4432 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig11722.1.1

>prot_C-tenellus_contig11722.1.1 ID=prot_C-tenellus_contig11722.1.1|Name=mRNA_C-tenellus_contig11722.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=443bp
MSYSVTLIMAQHLPADSSLLCEPCPSAIKSLSVFSLRGAKKGEIAAVSVP
LFVHQTLANRKQILTCANCHRFIGTPVTQLAMLEGALSNRGQSSGSRGND
ESEGRTRGLTKGKFRSLRTDIATADPHNLPGLPDLKMGAKKPGKGNYLGS
NLKDKTDSTNGPCRCVEVGRCDDIYCCDGCRRQAIAAGHNLICMAHEAEG
SPLFEFHKYALSTSETYLIAASAVAAAISLPEKTRPFEALGGWDEPFGRN
KEEEEEEKGQQMPSPLSKPLHSNLPSVKAEVAATTRLSGGARDEEMEETW
GLLHVSLVMGSSRVDETEHSVALSLDFYRRLVRALDRHLAPLTVPSPLVS
YCLGLEHTTSAVREEAFPWLSDIIAKVGCSYPSTGRDASTIHTGTAEEKQ
CTNSVQSGGSSNIAGGGEKRLKGVGTLPVVGGGSRGVTEQGQQ
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mRNA from alignment at C-tenellus_contig11722:228..4432-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig11722.1.1 ID=mRNA_C-tenellus_contig11722.1.1|Name=mRNA_C-tenellus_contig11722.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4205bp|location=Sequence derived from alignment at C-tenellus_contig11722:228..4432- (Choristocarpus tenellus KU2346)
ATGAGCTACTCTGTGACCCTCATCATGGCTCAACATCTACCAGCTGACTC
ATCCCTTCTGTGTGAGCCTTGTCCGTCGGCAATAAAGTCATTGTCGGTGA
GTGTCTGAAAATATAAGTGTTAGGTAGTACTTTATAGCCCTCAAGCTCCT
GAAACCTTGACCTCTATAGAACAACTTGAGCACCAACCACAACATCGTTT
GAATTTCATCCTTGTCACCGTCCTTGCCAGGTATTTTCACTCAGGGGAGC
CAAAAAGGGTGAGATAGCTGCTGTTAGTGTTCCATTGTTCGTGCATCAGA
CCCTTGCCAACAGGAAGCAGGTGAGGTCCTGAGCTAACGACTCACCTGCT
CGATACCTTGCATGTCTTCAACAGATGAGGACCGTTACCTATGCGCTAGT
GATAATGGTGGAAATTGCCTCTGATCCCTGCGAAAGACCTGCCCTTGCCC
TTCTATTGATCATCTCATTATCCTGTATGACATCATGCAGAACCTCTCGG
GGACAGTCATGTCTCTGTTCAGTCCTGATCCACTTTTGGTACGTATTTCC
ATACTGAAGTACCTTACTCATCGTCAACTTTTGTTCACTTCTAACTCTCT
CTTTTTGCAGATCTTAACCTGTGCGAACTGCCATCGCTTTATCGGGACAC
CAGTCACGCAGCTTGCCATGCTCGAAGGCGCCCTCTCCAACCGAGGTCAG
AGTAGCGGCAGCAGGGGCAACGACGAAAGTGAGGGCAGGACTAGAGGCTT
AACGAAAGGGAAGTTCAGGAGCCTCCGTACCGATATTGCCACGGCCGATC
CTCATAATCTCCCGGGTCTCCCCGACCTTAAGATGGGGGCCAAGAAGCCC
GGCAAAGGCAATTATCTCGGTAGCAATTTGAAAGATAAAACTGACAGCAC
AAACGGACCGTGTCGGTGTGTGGAAGTGGGGCGGTGCGATGATATTTATT
GCTGTGACGGTTGCAGGAGGCAGGCAATAGCTGCAGGACATAACCTCATC
TGCATGGCTCATGAGGCAGAGGGCAGGTAAGGGGGAGGGATAGAATATCA
CCAGGTACTCCTTCATACCTCGAGAAACTTGTTGGGGCTGAGACCGGTAT
ACTGTATTGCTGCAGAGGTCAAATACCATGCCTCATTGGATGAGTAGAGG
GTCTTAGGCTATACCTCTTTACCAAGGTATCATTTGGGTTCTGGAATAGT
GGTCCAAATGTGTGGGTTGGGTGAGAGGAAAGACTAAGAATTTGACTGCA
TTAGCTCTACTGCATAGTCATTTGAGCTTTGTGTCATATTTCTTTGAGTT
TTTTTCTTTCCATGCTTGTGGTGGTGTGGGAGAAGTTATTACTGAAATAC
TTTGGCAATTGTACTCCCTAGATCTGGATGCTTGTTGGGCCAATGATCTG
GAAGGCGCTGAAGTTTTAGAGTCCAAATATTAGCTCTTGGTTAGATACAT
CCTACTCTGTTGTCTTTTTTCTGTGACTCTGGATCCTTTTGTGGGAGAGG
GAAGTACAGCACACTGCAACCAAAAGAGTGTCGTAGACATTCAGTTCGGT
ACACATGTGAAGCAAATTGAAACTGTTTTTTTTCCTGTCCTATGACTAGA
GACCCTGTGGAAGCCTAAGAGCCACCTTTTGCTTCTGATGTTGACTCTGA
GATTGCAGGTTATCTGCTTTGAGGGGTGGGATGCTCATGGGTGTATTATC
AATGCACACTATTGAGTGGTATATTAGCTTGTGTGCACAAGGGTTCTCAT
CACAAAACATGTGCCATGCATCCTCTCTTCCTCCCCCACCCTGGACCCAA
CAATTTGGTTCTTCGCTTGTGCATAATAGAATTATTTTACTCTGGGGTAC
TCACCATATGAGAATGATTGCGTTGCATTATACTGCCTACAGAAGCAGAT
TTGGGTATCCACAGTATATTAGTAGTCCGCATGGTTAAGCCATGCTGCTT
CAGCAACAAAGGCTTCTTGTGGATGCAAAGATCATTTGCCAAGAGTTCCC
CTCTGAAAGACTTGTACCACACTGAAGCCATGTATCCCTGTCCTTCCTTT
TGGTGCTCTCTCCCACCCACACCCATGATCGGTAGCCCCCTCTTTGAGTT
CCACAAGTATGCCCTTAGTACAAGCGAGACCTACCTCATTGCAGCCTCAG
CCGTGGCAGCTGCAATCTCTCTCCCTGAAAAAACTCGACCGTTTGAGGCG
CTTGGAGGGTGGGACGAACCCTTTGGACGCAACAAGGAGGAGGAGGAGGA
GGAGAAGGGCCAGCAGATGCCATCACCGCTGTCAAAGCCATTACATTCTA
ACCTGCCAAGTGTAAAGGCCGAGGTTGCTGCCACTACTAGGCTATCGGGT
GGGGCACGAGATGAAGAGGTGGGGCATGAATCTTGAGAGGGAGGGAAGGG
AGTAGCTTGGTGGCAAGCAATTGGGTAAGCCCTGATTGACATTGCGAATG
CAAAGCAGTCCTGTTCTAGCGCTGCTTTGGTGCCCTATGCTATGTAGAAC
CATCTTTTTTCTTGTATATATATGTATCTGTATACCCATCAGAAAAAACT
TGAGGATTGTCAGTTACGCAGATCTCCCCACCTCCCCAACTACTCTGTGG
AGTGTGTCATGACCTCAGCTGGCGTCTTAGGAGACTATGAGTTCGTACAT
GTGAACGATTCCGTTCCCAAAATATCCTCAACTGTTTTCCAGATGGAGGA
GACCTGGGGCCTCCTCCATGTGTCTCTCGTGATGGGTAGTAGCAGGGTTG
ATGAGACGGAGCACTCCGTTGCTCTAAGCCTGGACTTTTACAGAAGACTG
GTTCGGGCACTGGATAGGCACCTTGCTCCCCTCACTGTGCCCTCGCCACT
AGTAAGGTGGGCCCCGTTGCTGTTTGTTTGCTCGCCTGGGTGGGAGGGTG
ATCTTCGCATGCCACTTCTCACCCCCATGCCGTTAGAGCTGCGTGTTTGG
CATATCTCTTACTGTGTACTCCGGAGAACATGTATTTTTATTTTTTATTT
GTTTGTAAAAAAAATGATTCACGTATGCTAAAATTTTATTATGTATGTAT
TATGTATGTATTATGTATGTATGTATGTATGTATGTATGTATGTATGTAT
TTATTGTGGAGAAGTCCCCTACGTGTGTTGAGTTTTGTTGGAAGTAGTTT
GTTATGTTGTGTGGCAATGTCATCATGTATCCCATAGCGAGGTTTGCCCT
TCCCGAAACAACTGAACAGATCTATCCACAGCAGTGTGTAGTTAATTGCT
TACCCATTGAAAAGAATAAAGGATTCCGTGCGTGGGTGAGCGGAAAACTT
CTGGTCCTTGGTTTTCTAGTTTTGAAAGAGGCTTTTTCGAAAGCCCGATG
TAGTGAAGACGCCTTTTGTTTGGGACCGGTGTGCGATTTGTGCTTTCAAT
ATAGAGCCCTATACTGAACTGGTGCGGAGCATGTGGTAGGAATTGGGGAT
AAAATTTCTTGTTTGTTTTTGTTTTTGATTTGGAGGTGAATCGCTGTGAG
CTCAAATCTGCTTTTTCAATTTCAGGATCTTTTTTCTTTTCCACATAATT
TCTTTCTGGACGATGATTGCATGTATGAAATATATTATGAGAGCTGATTG
TGTCCGTTGATGGCGTAGTAATCCAACACTATATATATATTTAATATGAC
ATCAAGATCCATATATTTGACTTCAGACTTTTCAATGCCTGAGTATATTT
TGAATGCATGACACACTCCCCATACACAGTTCTCTCATTCAGTTCAATTC
TGCCACAGACACAGGCACAGACACACACAGTGACCCTGGCCCTCTCCCCC
CCCTCCCCTCGCACCATGCTCTAGACCCCCTTCTGCTCACTAACAGACTG
TCTTACCTTCACCCTTTAAAAACGCACGCCTGCACATGGAAACCCCAAAT
GTTCTTCTTCTTCCCCACATGAAAGCTACTGCCTGGGCCTTGAGCACACT
ACCAGTGCAGTGAGGGAAGAAGCCTTTCCTTGGCTATCAGATATAATTGC
AAAGGTGGGGTGTTCCTACCCTTCCACGGGCAGAGATGCCTCTACTATTC
ATACAGGTACTGCAGAAGAAAAACAATGTACAAATAGTGTGCAGTCGGGT
GGAAGCAGCAACATAGCCGGCGGGGGAGAAAAACGCCTGAAAGGAGTAGG
AACTCTCCCTGTTGTGGGGGGGGGAAGCAGGGGGGTGACTGAGCAGGGTC
AGCAG
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Coding sequence (CDS) from alignment at C-tenellus_contig11722:228..4432-

>mRNA_C-tenellus_contig11722.1.1 ID=mRNA_C-tenellus_contig11722.1.1|Name=mRNA_C-tenellus_contig11722.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1329bp|location=Sequence derived from alignment at C-tenellus_contig11722:228..4432- (Choristocarpus tenellus KU2346)
ATGAGCTACTCTGTGACCCTCATCATGGCTCAACATCTACCAGCTGACTC
ATCCCTTCTGTGTGAGCCTTGTCCGTCGGCAATAAAGTCATTGTCGGTAT
TTTCACTCAGGGGAGCCAAAAAGGGTGAGATAGCTGCTGTTAGTGTTCCA
TTGTTCGTGCATCAGACCCTTGCCAACAGGAAGCAGATCTTAACCTGTGC
GAACTGCCATCGCTTTATCGGGACACCAGTCACGCAGCTTGCCATGCTCG
AAGGCGCCCTCTCCAACCGAGGTCAGAGTAGCGGCAGCAGGGGCAACGAC
GAAAGTGAGGGCAGGACTAGAGGCTTAACGAAAGGGAAGTTCAGGAGCCT
CCGTACCGATATTGCCACGGCCGATCCTCATAATCTCCCGGGTCTCCCCG
ACCTTAAGATGGGGGCCAAGAAGCCCGGCAAAGGCAATTATCTCGGTAGC
AATTTGAAAGATAAAACTGACAGCACAAACGGACCGTGTCGGTGTGTGGA
AGTGGGGCGGTGCGATGATATTTATTGCTGTGACGGTTGCAGGAGGCAGG
CAATAGCTGCAGGACATAACCTCATCTGCATGGCTCATGAGGCAGAGGGC
AGCCCCCTCTTTGAGTTCCACAAGTATGCCCTTAGTACAAGCGAGACCTA
CCTCATTGCAGCCTCAGCCGTGGCAGCTGCAATCTCTCTCCCTGAAAAAA
CTCGACCGTTTGAGGCGCTTGGAGGGTGGGACGAACCCTTTGGACGCAAC
AAGGAGGAGGAGGAGGAGGAGAAGGGCCAGCAGATGCCATCACCGCTGTC
AAAGCCATTACATTCTAACCTGCCAAGTGTAAAGGCCGAGGTTGCTGCCA
CTACTAGGCTATCGGGTGGGGCACGAGATGAAGAGATGGAGGAGACCTGG
GGCCTCCTCCATGTGTCTCTCGTGATGGGTAGTAGCAGGGTTGATGAGAC
GGAGCACTCCGTTGCTCTAAGCCTGGACTTTTACAGAAGACTGGTTCGGG
CACTGGATAGGCACCTTGCTCCCCTCACTGTGCCCTCGCCACTAGTAAGC
TACTGCCTGGGCCTTGAGCACACTACCAGTGCAGTGAGGGAAGAAGCCTT
TCCTTGGCTATCAGATATAATTGCAAAGGTGGGGTGTTCCTACCCTTCCA
CGGGCAGAGATGCCTCTACTATTCATACAGGTACTGCAGAAGAAAAACAA
TGTACAAATAGTGTGCAGTCGGGTGGAAGCAGCAACATAGCCGGCGGGGG
AGAAAAACGCCTGAAAGGAGTAGGAACTCTCCCTGTTGTGGGGGGGGGAA
GCAGGGGGGTGACTGAGCAGGGTCAGCAG
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